- w -
- whitespaceDelimiter
: umms.esat.ESAT
, umms.esat.ESATDistanceCalculator
- wigFactory
: broad.core.annotation.AnnotationFactoryFactory
- WINDOW
: broad.pda.samtools.PairedEndTDF
, broad.pda.seq.rap.BuildRatioNullDistribution
, broad.pda.seq.rap.GCContent
, broad.pda.seq.rap.PlotAggregateRegions
, broad.pda.seq.rap.RatioPermutationPeakCaller
, broad.pda.seq.rap.SkellamKLPeakCaller
, broad.pda.seq.rap.SlideAndCalculate
, broad.pda.seq.rap.SlideAndCount
- windowScores
: broad.pda.seq.protection.SampleData
, broad.pda.seq.protection.WindowScores
- windowSize
: broad.pda.seq.protection.MultiSampleScanPeakCaller
, broad.pda.seq.protection.SampleData
, broad.pda.seq.protection.TwoSampleScanSkellamPeakCaller
, broad.pda.seq.protection.WindowScores
- WOBLE_PATTERN_MAP
: broad.core.primer3.RestrictionEnzyme