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umms.esat.ESAT Member List

This is the complete list of members for umms.esat.ESAT, including all inherited members.

array2List(double[] array)umms.esat.ESATstatic
calculateNormalizationFactors(MatrixWithHeaders mat)umms.esat.ESATstatic
ESAT(String[] args)umms.esat.ESAT
getSubAnnotationFromEnd(Gene annotation, int length, int distanceFromTranscriptEnd)umms.esat.ESATstatic
getSubAnnotationFromStart(Gene annotation, int length, int distanceFromTranscriptStart)umms.esat.ESATstatic
main(String[] args)umms.esat.ESATstatic
reconstructGeneEnds(BEDFileParser completeReconstruction, BEDFileParser annotations, String annotationFile)umms.esat.ESATstatic
whitespaceDelimiterumms.esat.ESATstatic
writeNormalizedMatrix(String fileName, MatrixWithHeaders resultMatrix)umms.esat.ESATstatic
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