umms.core.model.AlignmentModel.AlignmentCount Class Reference

Collaboration diagram for umms.core.model.AlignmentModel.AlignmentCount:

Public Member Functions
	AlignmentCount (Alignment read, Collection< Alignment > containedReads)
	AlignmentCount (Alignment read)
double	getCount ()
int	getNumReads ()
Alignment	getRead ()

Constructor & Destructor Documentation

umms.core.model.AlignmentModel.AlignmentCount.AlignmentCount	(	Alignment	read,
		Collection< Alignment >	containedReads
	)

umms.core.model.AlignmentModel.AlignmentCount.AlignmentCount

(

Alignment

read

)

Member Function Documentation

double umms.core.model.AlignmentModel.AlignmentCount.getCount

(

)

int umms.core.model.AlignmentModel.AlignmentCount.getNumReads

(

)

Alignment umms.core.model.AlignmentModel.AlignmentCount.getRead

(

)

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The documentation for this class was generated from the following file:

• java/umms/core/model/AlignmentModel.java