jaligner.matrix.MatrixGenerator Class Reference

Static Public Member Functions
static Matrix	generate (float match, float mismatch)

Detailed Description

A utility class to generate a scoring matrix from a fixed match and mismatch scoring scheme.

Author

Ahmed Moustafa (ahmed.nosp@m.@use.nosp@m.rs.sf.nosp@m..net)

Member Function Documentation

static Matrix jaligner.matrix.MatrixGenerator.generate ( float  match, float  mismatch  )

static

Returns scoring matrix from a fixed match/mismatch scoring scheme.

Parameters

match	match score
mismatch	mistmatch score

Returns

scoring matrix

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The documentation for this class was generated from the following file:

• java/jaligner/matrix/MatrixGenerator.java