broad.pda.seq.rap.rna.CollectRnaSeqMetrics Member List

This is the complete list of members for broad.pda.seq.rap.rna.CollectRnaSeqMetrics, including all inherited members.

acceptRead(final SAMRecord rec, final ReferenceSequence refSeq)	broad.pda.seq.rap.rna.CollectRnaSeqMetrics	protected
BUFFER	broad.pda.seq.rap.rna.CollectRnaSeqMetrics
EXCLUDE_BED	broad.pda.seq.rap.rna.CollectRnaSeqMetrics
EXCLUDE_REGION_FILE	broad.pda.seq.rap.rna.CollectRnaSeqMetrics
finish()	broad.pda.seq.rap.rna.CollectRnaSeqMetrics	protected
main(final String[] argv)	broad.pda.seq.rap.rna.CollectRnaSeqMetrics	static
setup(final SAMFileHeader header, final File samFile)	broad.pda.seq.rap.rna.CollectRnaSeqMetrics	protected
USAGE	broad.pda.seq.rap.rna.CollectRnaSeqMetrics