This is the complete list of members for broad.pda.seq.rap.RAPPeakCaller, including all inherited members.
| callKLPeaks(String outFile, double klCutOff) | broad.pda.seq.rap.RAPPeakCaller | |
| callSkellamPeaks(String outFile, double maxSkellam, double maxScanPvalue) | broad.pda.seq.rap.RAPPeakCaller | |
| getCoordinateSpace() | broad.pda.seq.rap.RAPPeakCaller | |
| logger | broad.pda.seq.rap.RAPPeakCaller | protectedstatic |
| main(String[] args) | broad.pda.seq.rap.RAPPeakCaller | static |
| RAPPeakCaller(String backgroundFile, String rapFile, String sizes, String maskedregions, int windowSize, int step) | broad.pda.seq.rap.RAPPeakCaller |
1.8.7