broad.pda.samtools.TrimFastqReads Class Reference

Inheritance diagram for broad.pda.samtools.TrimFastqReads:

Collaboration diagram for broad.pda.samtools.TrimFastqReads:

Static Public Member Functions
static void	main (final String[] args)

Public Attributes
String	USAGE = "Trims FASTQ files to remove bases at each end."
File	INPUT
int	removeAtStart = 0
int	removeAtEnd = 0
File	OUTPUT

Protected Member Functions
int	doWork ()

Member Function Documentation

int broad.pda.samtools.TrimFastqReads.doWork ( )

protected

static void broad.pda.samtools.TrimFastqReads.main ( final String[]  args )

static

Stock main method.

Parameters

args	main arguments

Member Data Documentation

File broad.pda.samtools.TrimFastqReads.INPUT

File broad.pda.samtools.TrimFastqReads.OUTPUT

int broad.pda.samtools.TrimFastqReads.removeAtEnd = 0

int broad.pda.samtools.TrimFastqReads.removeAtStart = 0

String broad.pda.samtools.TrimFastqReads.USAGE = "Trims FASTQ files to remove bases at each end."

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The documentation for this class was generated from the following file:

• java/broad/pda/samtools/TrimFastqReads.java