Public Member Functions
	ComputeHypergeomtricEnrichment (MatrixWithHeaders diffExpressed, Map< String, Collection< String >> geneSets, Map< String, String > chipInfo, String save, double alpha, int cutoff) throws IOException

	ComputeHypergeomtricEnrichment (Collection< String > set1, Collection< String > set2, Collection< String > universe)

Static Public Member Functions
static void	main (String[] args) throws IOException, ParseException

Constructor & Destructor Documentation

broad.pda.geneexpression.ComputeHypergeomtricEnrichment.ComputeHypergeomtricEnrichment	(	MatrixWithHeaders	diffExpressed,
		Map< String, Collection< String >>	geneSets,
		Map< String, String >	chipInfo,
		String	save,
		double	alpha,
		int	cutoff
	)		throws IOException

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broad.pda.geneexpression.ComputeHypergeomtricEnrichment.ComputeHypergeomtricEnrichment	(	Collection< String >	set1,
		Collection< String >	set2,
		Collection< String >	universe
	)

Member Function Documentation

static void broad.pda.geneexpression.ComputeHypergeomtricEnrichment.main ( String[] args ) throws IOException, ParseException

static

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The documentation for this class was generated from the following file: