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broad.pda.gene.transcriptsNullModel Member List

This is the complete list of members for broad.pda.gene.transcriptsNullModel, including all inherited members.

CrossRandModelsWithBed(String bedToCrossWith_fname, BEDFileParser refBed, String outfile)broad.pda.gene.transcriptsNullModel
getRandomSets()broad.pda.gene.transcriptsNullModel
makeRandTranscriptList(int numRand, BEDFileParser ref)broad.pda.gene.transcriptsNullModel
printRandModels(String outprefix)broad.pda.gene.transcriptsNullModel
transcriptsNullModel(BEDFileParser refGenes, BEDFileParser centromers, String chrSizeF)broad.pda.gene.transcriptsNullModel
writeIntergenicGenome(String outf)broad.pda.gene.transcriptsNullModel