This is the complete list of members for broad.pda.differentialExpression.Permutations, including all inherited members.
| permuteAndAssignFDR(MatrixWithHeaders testStats, MatrixWithHeaders data, Collection< String > group1, Collection< String > group2, int numberPermutations, double[] fudgeFactors, boolean useFold, boolean paired, double alpha) | broad.pda.differentialExpression.Permutations | static |
| permuteData(MatrixWithHeaders data, Collection< String > group1, Collection< String > group2, int numberPermutations, double[] fudgeFactors, boolean useFold, boolean paired) | broad.pda.differentialExpression.Permutations | static |
| permuteData(MatrixWithHeaders data, Map< String, Collection< String >> groups, int numberPermutations, double[] fudgeFactors, boolean useFold, boolean paired) | broad.pda.differentialExpression.Permutations | static |
| permuteDataByGroupSize(MatrixWithHeaders data, int groupSize, Map< String, Collection< String >> groups, int numPerm, double[] fudgeFactors, boolean useFold) | broad.pda.differentialExpression.Permutations | static |
1.8.7