Static Public Member Functions
static MatrixWithHeaders	computeAbsFoldMatrix (MatrixWithHeaders data, Collection< String > group1, Collection< String > group2)

static MatrixWithHeaders	computeFoldMatrix (MatrixWithHeaders data, Collection< String > group1, Collection< String > group2)

static MatrixWithHeaders	computeTestStatistics (MatrixWithHeaders data, Collection< String > group1, Collection< String > group2, double[] fudgeFactors, boolean useFold, boolean paired)

static MatrixWithHeaders	computeTestStatistics (MatrixWithHeaders data, Map< String, Collection< String >> groups, double[] fudgeFactors, boolean useFold, boolean paired)

Member Function Documentation

static MatrixWithHeaders broad.pda.differentialExpression.DifferentialScoring.computeAbsFoldMatrix	(	MatrixWithHeaders	data,
		Collection< String >	group1,
		Collection< String >	group2
	)

static

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static MatrixWithHeaders broad.pda.differentialExpression.DifferentialScoring.computeFoldMatrix	(	MatrixWithHeaders	data,
		Collection< String >	group1,
		Collection< String >	group2
	)

static

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static MatrixWithHeaders broad.pda.differentialExpression.DifferentialScoring.computeTestStatistics	(	MatrixWithHeaders	data,
		Collection< String >	group1,
		Collection< String >	group2,
		double[]	fudgeFactors,
		boolean	useFold,
		boolean	paired
	)

static

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static MatrixWithHeaders broad.pda.differentialExpression.DifferentialScoring.computeTestStatistics	(	MatrixWithHeaders	data,
		Map< String, Collection< String >>	groups,
		double[]	fudgeFactors,
		boolean	useFold,
		boolean	paired
	)

static

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The documentation for this class was generated from the following file:

Static Public Member Functions