This is the complete list of members for broad.pda.datastructures.AlignmentsReader, including all inherited members.
| AlignmentsReader() | broad.pda.datastructures.AlignmentsReader | |
| AlignmentsReader(Collection< Alignments > annot) | broad.pda.datastructures.AlignmentsReader | |
| AlignmentsReader(BufferedReader br) | broad.pda.datastructures.AlignmentsReader | |
| AlignmentsReader(String input) | broad.pda.datastructures.AlignmentsReader | |
| createAnnotation(GenomicAnnotation a) | broad.pda.datastructures.AlignmentsReader | |
| load(BufferedReader br) | broad.pda.datastructures.AlignmentsReader | |
| parse(BufferedReader br, GenomicAnnotationFilter< Alignments > filter, AnnotationHandler handler) | broad.pda.datastructures.AlignmentsReader | |
| parse(String file, GenomicAnnotationFilter< Alignments > filter, AnnotationHandler handler) | broad.pda.datastructures.AlignmentsReader | |
| write(BufferedWriter bw) | broad.pda.datastructures.AlignmentsReader |
1.8.7