Collaboration diagram for broad.core.siphy.StationaryDistributionIO:

Public Member Functions
	StationaryDistributionIO ()

void	loadIntoDistribution (File source, EmpiricalDistribution ed, boolean shortFormat) throws IOException

void	load (InputStream is) throws IOException

void	load (String filePath) throws IOException

void	shift (int amountToShift)

List< PiFit >	getFits ()

Iterator< PiFit >	getOverlappers (LightweightGenomicAnnotation annotation)

Constructor & Destructor Documentation

broad.core.siphy.StationaryDistributionIO.StationaryDistributionIO ( )

Member Function Documentation

List<PiFit> broad.core.siphy.StationaryDistributionIO.getFits ( )

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Iterator<PiFit> broad.core.siphy.StationaryDistributionIO.getOverlappers ( LightweightGenomicAnnotation annotation )

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void broad.core.siphy.StationaryDistributionIO.load ( InputStream is ) throws IOException

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void broad.core.siphy.StationaryDistributionIO.load ( String filePath ) throws IOException

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void broad.core.siphy.StationaryDistributionIO.loadIntoDistribution	(	File	source,
		EmpiricalDistribution	ed,
		boolean	shortFormat
	)		throws IOException

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void broad.core.siphy.StationaryDistributionIO.shift ( int amountToShift )

The documentation for this class was generated from the following file: