broad.core.sequence.TranscribedSequenceComposition Member List

This is the complete list of members for broad.core.sequence.TranscribedSequenceComposition, including all inherited members.

allNucleotides	broad.core.sequence.TranscribedSequenceComposition	protected
getTranscribedBaseAtBeginningPosition(Gene parent, Alignment read, int offset)	broad.core.sequence.TranscribedSequenceComposition
main(String[] args)	broad.core.sequence.TranscribedSequenceComposition	static
TranscribedSequenceComposition(String bamFile, String geneBedFile, String genomeFasta, TranscriptionRead transcriptionRead)	broad.core.sequence.TranscribedSequenceComposition
TranscribedSequenceComposition(String bamFile, String geneBedFile, String bedFileRegionsOfInterest, String genomeFasta, TranscriptionRead transcriptionRead)	broad.core.sequence.TranscribedSequenceComposition