broad.core.primer3.isPCRLike Class Reference

Collaboration diagram for broad.core.primer3.isPCRLike:

Public Member Functions
	isPCRLike (Pair< String > primers, List< Sequence > sequences)
Collection< Sequence >	getAllPossibleAmplicons () throws SearchException

Static Public Member Functions
static void	main (String[] args) throws IOException, SearchException

Constructor & Destructor Documentation

broad.core.primer3.isPCRLike.isPCRLike	(	Pair< String >	primers,
		List< Sequence >	sequences
	)

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Member Function Documentation

Collection<Sequence> broad.core.primer3.isPCRLike.getAllPossibleAmplicons

(

)

throws SearchException

Get all possible amplicons as subsequences of the original sequences Name of subsequence is equal to the name of the parent sequence

Returns

Collection of possible amplicons

Exceptions

SearchException

static void broad.core.primer3.isPCRLike.main ( String[]  args ) throws IOException, SearchException

static

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The documentation for this class was generated from the following file:

• java/broad/core/primer3/isPCRLike.java