| addBooleanArg(String flag, String description, boolean required) | broad.core.parser.CommandLineParser | |
| addBooleanArg(String flag, String description, boolean required, boolean def) | broad.core.parser.CommandLineParser | |
| addDoubleArg(String flag, String description, boolean required) | broad.core.parser.CommandLineParser | |
| addDoubleArg(String flag, String description, boolean required, double def) | broad.core.parser.CommandLineParser | |
| addFloatArg(String flag, String description, boolean required) | broad.core.parser.CommandLineParser | |
| addFloatArg(String flag, String description, boolean required, float def) | broad.core.parser.CommandLineParser | |
| addIntArg(String flag, String description, boolean required) | broad.core.parser.CommandLineParser | |
| addIntArg(String flag, String description, boolean required, int def) | broad.core.parser.CommandLineParser | |
| addStringArg(String flag, String description, boolean required) | broad.core.parser.CommandLineParser | |
| addStringArg(String flag, String description, boolean required, String def) | broad.core.parser.CommandLineParser | |
| addStringListArg(String flag, String description, boolean required, ArrayList< String > def) | broad.core.parser.CommandLineParser | |
| addStringListArg(String flag, String description, boolean required) | broad.core.parser.CommandLineParser | |
| CommandLineParser() | broad.core.parser.CommandLineParser | |
| getArgString() | broad.core.parser.CommandLineParser | |
| getArgString(Collection< String > flagsToRemove) | broad.core.parser.CommandLineParser | |
| getBooleanArg(String flag) | broad.core.parser.CommandLineParser | |
| getDoubleArg(String flag) | broad.core.parser.CommandLineParser | |
| getFlagsAndValues() | broad.core.parser.CommandLineParser | |
| getFloatArg(String flag) | broad.core.parser.CommandLineParser | |
| getIntArg(String flag) | broad.core.parser.CommandLineParser | |
| getStringArg(String flag) | broad.core.parser.CommandLineParser | |
| getStringListArg(String flag) | broad.core.parser.CommandLineParser | |
| hasBooleanFlag(String flag) | broad.core.parser.CommandLineParser | |
| hasDoubleFlag(String flag) | broad.core.parser.CommandLineParser | |
| hasFloatFlag(String flag) | broad.core.parser.CommandLineParser | |
| hasIntFlag(String flag) | broad.core.parser.CommandLineParser | |
| hasStringFlag(String flag) | broad.core.parser.CommandLineParser | |
| parse(String[] args, boolean allowDuplicateTags) | broad.core.parser.CommandLineParser | |
| parse(String[] args) | broad.core.parser.CommandLineParser | |
| printHelpMessage() | broad.core.parser.CommandLineParser | |
| setProgramDescription(String description) | broad.core.parser.CommandLineParser | |