| add(double observation) | broad.core.math.EmpiricalDistribution | |
| addAll(Collection< Double > values) | broad.core.math.EmpiricalDistribution | |
| addAll(double[] values) | broad.core.math.EmpiricalDistribution | |
| addAll(Matrix vals) | broad.core.math.EmpiricalDistribution | |
| addDistribution(EmpiricalDistribution other) | broad.core.math.EmpiricalDistribution | |
| addPsuedocounts(double psuedocount) | broad.core.math.EmpiricalDistribution | |
| chiSquareDistance(EmpiricalDistribution other) | broad.core.math.EmpiricalDistribution | |
| EmpiricalDistribution(int numberOfBins, double min, double max) | broad.core.math.EmpiricalDistribution | |
| EmpiricalDistribution(int numberOfBins, double min, double max, boolean includeOutOfRange) | broad.core.math.EmpiricalDistribution | |
| EmpiricalDistribution(Collection< Double > vals, int numberOfBins) | broad.core.math.EmpiricalDistribution | |
| EmpiricalDistribution(Collection< Double > vals) | broad.core.math.EmpiricalDistribution | |
| EmpiricalDistribution(Collection< Double > vals, int numberOfBins, boolean absVal) | broad.core.math.EmpiricalDistribution | |
| EmpiricalDistribution(double[] vals, int numberOfBins) | broad.core.math.EmpiricalDistribution | |
| EmpiricalDistribution(List< Double > vals, int numberOfBins) | broad.core.math.EmpiricalDistribution | |
| EmpiricalDistribution(double[] vals, int numberOfBins, double min, double max) | broad.core.math.EmpiricalDistribution | |
| EmpiricalDistribution(InputStream is) | broad.core.math.EmpiricalDistribution | |
| EmpiricalDistribution(File source) | broad.core.math.EmpiricalDistribution | |
| EmpiricalDistribution(Matrix permutations, int numberOfBins) | broad.core.math.EmpiricalDistribution | |
| ensureNoEmptyBins() | broad.core.math.EmpiricalDistribution | |
| getAllDataValues() | broad.core.math.EmpiricalDistribution | |
| getBin(double value) | broad.core.math.EmpiricalDistribution | |
| getBinEnd(int bin) | broad.core.math.EmpiricalDistribution | |
| getBinMidPoint(int bin) | broad.core.math.EmpiricalDistribution | |
| getBinNumber() | broad.core.math.EmpiricalDistribution | |
| getBinStart(int bin) | broad.core.math.EmpiricalDistribution | |
| getCountByBinStart() | broad.core.math.EmpiricalDistribution | |
| getCumulativeProbability(double value) | broad.core.math.EmpiricalDistribution | |
| getDensity(int bin) | broad.core.math.EmpiricalDistribution | |
| getDistributionOfHistogramValues() | broad.core.math.EmpiricalDistribution | |
| getEmpiricalMaxStatisticDistribution(Collection< EmpiricalDistribution > distributions) | broad.core.math.EmpiricalDistribution | static |
| getFirstIntersectLeftFromMedian(EmpiricalDistribution other) | broad.core.math.EmpiricalDistribution | |
| getFirstIntersectRightFromMedian(EmpiricalDistribution other) | broad.core.math.EmpiricalDistribution | |
| getHistogram(int bin) | broad.core.math.EmpiricalDistribution | |
| getKSStatistic(List< Double > observed) | broad.core.math.EmpiricalDistribution | |
| getKSStatistic(double[] observed) | broad.core.math.EmpiricalDistribution | |
| getMax() | broad.core.math.EmpiricalDistribution | |
| getMean() | broad.core.math.EmpiricalDistribution | |
| getMedianOfAllDataValues() | broad.core.math.EmpiricalDistribution | |
| getMin() | broad.core.math.EmpiricalDistribution | |
| getNumberOfValuesLargerThan(double value) | broad.core.math.EmpiricalDistribution | |
| getPercentOfValuesBetween(double leftBound, double rightBound) | broad.core.math.EmpiricalDistribution | |
| getPercentOfValuesLargerThan(double value) | broad.core.math.EmpiricalDistribution | |
| getProbability(double size) | broad.core.math.EmpiricalDistribution | |
| getPValue(double score) | broad.core.math.EmpiricalDistribution | |
| getPValue(double score, double min) | broad.core.math.EmpiricalDistribution | |
| getPValue2(double score) | broad.core.math.EmpiricalDistribution | |
| getQuantileOfBins(double probability) | broad.core.math.EmpiricalDistribution | |
| getRawDensity(int bin) | broad.core.math.EmpiricalDistribution | |
| getStandardDeviation() | broad.core.math.EmpiricalDistribution | |
| getTotalObservations() | broad.core.math.EmpiricalDistribution | |
| getZscore(double value) | broad.core.math.EmpiricalDistribution | |
| KLDivergence(EmpiricalDistribution other) | broad.core.math.EmpiricalDistribution | |
| KLDivergenceSym(EmpiricalDistribution other) | broad.core.math.EmpiricalDistribution | |
| leftIntersect(EmpiricalDistribution other) | broad.core.math.EmpiricalDistribution | |
| main(String[] args) | broad.core.math.EmpiricalDistribution | static |
| numBins() | broad.core.math.EmpiricalDistribution | |
| rightIntersect(EmpiricalDistribution other) | broad.core.math.EmpiricalDistribution | |
| testGoodnessOfFit(EmpiricalDistribution other) | broad.core.math.EmpiricalDistribution | |
| USAGE | broad.core.math.EmpiricalDistribution | static |
| write(BufferedWriter bw) | broad.core.math.EmpiricalDistribution | |
| write(String save) | broad.core.math.EmpiricalDistribution | |
1.8.7
