broad.core.annotation.AnnotationReaderFactory Class Reference

Static Public Member Functions
static AnnotationReader <?extends GenomicAnnotation >	create (String sourceFile, String annotationType) throws ParseException, IOException
static AnnotationReader <?extends GenomicAnnotation >	create (String annotationType) throws ParseException, IOException
static AnnotationReader <?extends GenomicAnnotation >	create (String sourceFile, String annotationType, final double minScore) throws ParseException, IOException
static AnnotationReader <?extends GenomicAnnotation >	create (String sourceFile, String annotationType, final String chromosome) throws ParseException, IOException

Member Function Documentation

static AnnotationReader<? extends GenomicAnnotation> broad.core.annotation.AnnotationReaderFactory.create ( String  sourceFile, String  annotationType  ) throws ParseException, IOException

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static AnnotationReader<? extends GenomicAnnotation> broad.core.annotation.AnnotationReaderFactory.create ( String  annotationType ) throws ParseException, IOException

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static AnnotationReader<? extends GenomicAnnotation> broad.core.annotation.AnnotationReaderFactory.create ( String  sourceFile, String  annotationType, final double  minScore  ) throws ParseException, IOException

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static AnnotationReader<? extends GenomicAnnotation> broad.core.annotation.AnnotationReaderFactory.create ( String  sourceFile, String  annotationType, final String  chromosome  ) throws ParseException, IOException

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The documentation for this class was generated from the following file:

• java/broad/core/annotation/AnnotationReaderFactory.java