.SUFFIXES:
SHELL=/bin/sh
HOME = /nlmusr/gchirn/linux
CHINLIB = $(HOME)/CORE/CHIN_LIB
CHINSTAT = $(HOME)/CORE/CHIN_STAT
BINDIR = $(HOME)/CORE/bin
INCLUDE = $(HOME)/CORE/include
LIBDIRS=-L$(HOME)/CORE/lib -L/usr/local/lib -L/usr/lib/X11 -L/usr/X11R6/lib -L../../CEPHES
OPTION=-D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -m64

all: $(BINDIR)/ngs_remove_clip_noise_by_mrna $(BINDIR)/ngs_genecentric

$(BINDIR)/ngs_remove_clip_noise_by_mrna: ngs_remove_clip_noise_by_mrna.c $(CHINLIB)/chin_lib.o $(CHINSTAT)/chin_stat.o
	gcc $(OPTION) -O -I$(CHINLIB) -I$(CHINSTAT) ngs_remove_clip_noise_by_mrna.c -o $(BINDIR)/ngs_remove_clip_noise_by_mrna $(CHINLIB)/chin_lib.o $(CHINSTAT)/chin_stat.o $(LIBDIRS) -lprob -lm

$(BINDIR)/ngs_genecentric: ngs_genecentric.c $(CHINLIB)/chin_lib.o $(CHINSTAT)/chin_stat.o
	gcc $(OPTION) -O -I$(CHINLIB) -I$(CHINSTAT) ngs_genecentric.c -o $(BINDIR)/ngs_genecentric $(CHINLIB)/chin_lib.o $(CHINSTAT)/chin_stat.o $(LIBDIRS) -lprob -lm

