.SUFFIXES:
SHELL=/bin/sh

HOME = /nlmusr/gchirn/linux
CHINLIB = $(HOME)/CORE/CHIN_LIB
CHINSTAT = $(HOME)/CORE/CHIN_STAT
INCLUDE = $(HOME)/CORE/include
LIBDIRS=-L$(HOME)/CORE/lib -L/usr/local/lib -L/usr/lib/X11 -L/usr/X11R6/lib -L../CEPHES
OPTION=-D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -m64
CC=gcc

MACHINE_DEPENDENT = -DBLASTALL='"/usca/apps/Linux/bin/blastall"' -DFASTADIR='"$(HOME)/FASTA"' -DBLASTDBENV='"$(HOME)/dt/blast"' -DNCBIENV='"$(HOME)/ncbi"' -DBLASTMATENV='"$(HOME)/CHIN_LIB/matrix"' -DBLASTFILTERENV='"$(HOME)/CHIN_LIB/filter"' -DMATRIX_NT='"$(HOME)/CHIN_LIB/matrix/nt"' -DMATRIX_AA='"$(HOME)/CHIN_LIB/matrix/aa"'

all: chin_stat.o

chin_stat.o: chin_stat.c chin_stat.h $(CHINLIB)/chin_lib.o
	$(CC) $(OPTION) -I$(CHINLIB) -I$(INCLUDE) $(MACHINE_DEPENDENT) -c chin_stat.c
