cycle_id	cycle_score	cycle_length	cluster_id	adjacent	deletion	eversion	gene1	gene2	gene_chromosome1	gene_chromosome2	gene_end1	gene_end2	gene_location1	gene_location2	gene_name1	gene_name2	gene_start1	gene_start2	gene_strand1	gene_strand2	genome_breakseqs_percident	genomic_break_pos1	genomic_break_pos2	genomic_strand1	genomic_strand2	interchromosomal	inversion	library_name	max_map_count	mean_map_count	min_map_count	num_multi_map	repeat_list1	repeat_list2	repeat_proportion1	repeat_proportion2	repeat_proportion_max	span_count	span_coverage1	span_coverage2	span_coverage_max	span_coverage_min
49	0.339	697	2560921	N	N	N	ENSG00000185666	ENSG00000112304	22	6	31784358	24809917	intron	intron	SYN3	THEM2	31238539	24775254	-	+	0.510057471	31257895	24791935	-	+	Y	N	963	2	1.1	1	1	Low_complexity	"SINE,SINE,LTR"	0.055882353	0.507042254	0.507042254	10	0.754874425	0.844673613	0.844673613	0.754874425
49	0.339	697	2562753	N	N	N	ENSG00000112304	ENSG00000185666	6	22	24809917	31784358	intron	intron	THEM2	SYN3	24775254	31238539	+	-	0.531208499	24791967	31258560	-	+	Y	N	963	20	2.117647059	1	1	LTR	-	0.460227273	0	0.460227273	17	0.987791069	1.02427199	1.02427199	0.987791069
27	1.04894	488	7152698	N	N	N	ENSG00000127324	ENSG00000127324	12	12	70121945	70121945	intron	intron	TSPAN8	TSPAN8	69805136	69805136	-	-	0.530089629	69819061	69820035	-	-	N	Y	963	1	1	1	0	-	"LINE,LINE"	0	0.393719807	0.393719807	16	0.878348309	1.136520975	1.136520975	0.878348309
27	1.04894	488	7135504	N	N	N	ENSG00000127324	ENSG00000127324	12	12	70121945	70121945	intron	intron	TSPAN8	TSPAN8	69805136	69805136	-	-	0.668965517	69819445	69819931	+	+	N	Y	963	1	1	1	0	-	-	0	0	0	4	0.263785115	0.521957781	0.521957781	0.263785115
62	1.95718	232	2900598	N	N	N	ENSG00000119812	ENSG00000116544	2	1	33677866	35167773	intron	intron	FAM98A	DLGAP3	33662232	35103624	-	-	0.571005917	33676023	35115847	-	+	Y	N	963	1	1	1	0	-	LINE	0	0.557065217	0.557065217	9	0.782936671	0.912023004	0.912023004	0.782936671
62	1.95718	232	2954204	N	N	N	ENSG00000116544	ENSG00000119812	1	2	35167773	33677866	intron	intron	DLGAP3	FAM98A	35103624	33662232	-	-	0	35115716	33676124	-	+	Y	N	963	1	1	1	0	LINE	-	1	0	1	3	0.561244926	0.538795129	0.561244926	0.538795129
94	2.81359	1395	1166660	N	N	N	ENSG00000205583	ENSG00000174353	7	7	72114377	74834926	downstream	downstream	AC005488.2-6	STAG3L2	72106483	74826391	-	+	0.508196721	72104757	74835334	-	-	N	Y	963	15	7.714285714	4	7	"SINE,DNA,SINE"	"SINE,SINE"	0.640668524	0.63172043	0.640668524	7	0.847479838	0.853092287	0.853092287	0.847479838
94	2.81359	1395	1142277	N	N	N	ENSG00000205583	ENSG00000174353	7	7	72114377	74834926	downstream	downstream	AC005488.2-6	STAG3L2	72106483	74826391	-	+	0.443857332	72105441	74836045	+	+	N	Y	963	15	7.857142857	4	7	"SINE,SINE,SINE"	"SINE,DNA,SINE"	0.630727763	0.597402597	0.630727763	7	0.86712341	0.920441678	0.920441678	0.86712341
57	3.57788	401	5734521	N	N	N	ENSG00000124789	ENSG00000196358	6	9	17814797	134109742	intron	intron	NUP153	NTNG2	17723248	134027155	-	+	0.681127983	17782542	134085420	-	-	Y	N	963	1	1	1	0	SINE	"LINE,SINE,SINE"	0.025157233	0.794019934	0.794019934	3	0.404096347	0.634206766	0.634206766	0.404096347
57	3.57788	401	5861513	N	N	N	ENSG00000163689	ENSG00000124789	3	6	59010755	17814797	upstream	intron	C3orf67	NUP153	58702777	17723248	-	-	0.536977492	59212722	17782439	-	+	Y	N	963	1	1	1	0	SINE	"LINE,LINE"	0.219512195	1	1	7	0.825030041	0.724005954	0.825030041	0.724005954
57	3.57788	401	1531785	N	N	N	ENSG00000134324	ENSG00000163689	2	3	11884982	59010755	intron	upstream	LPIN1	C3orf67	11781929	58702777	+	-	0.526162791	11861626	59212709	-	+	Y	N	963	1	1	1	0	-	SINE	0	0.635802469	0.635802469	4	0.409708796	0.392871448	0.409708796	0.392871448
57	3.57788	401	1716487	N	N	N	ENSG00000134324	ENSG00000196358	2	9	11884982	134109742	intron	intron	LPIN1	NTNG2	11781929	134027155	+	+	0.555555556	11861448	134085313	+	+	Y	N	963	2	1.333333333	1	1	-	LINE	0	1	1	3	0.291847361	0.415321245	0.415321245	0.291847361
28	3.83102	1988	5087614	N	N	N	ENSG00000211547	ENSG00000207986	2	16	132755208	33869267	downstream	upstream	AC097532.3-1	AC136932.4-2	132755117	33869153	-	+	0.531707317	132747163	33863467	+	+	Y	N	963	8	1.336956522	1	22	LINE	"Low_complexity,LTR"	0.802083333	0.441717791	0.802083333	92	0.808192693	0.914829229	0.914829229	0.808192693
28	3.83102	1988	5120552	N	N	N	ENSG00000211547	ENSG00000207986	2	16	132755208	33869267	downstream	upstream	AC097532.3-1	AC136932.4-2	132755117	33869153	-	+	0.79584121	132745708	33862934	-	-	Y	N	963	4	1.322580645	1	8	"Low_complexity,SINE"	"LTR,Low_complexity"	0.558974359	0.525525526	0.558974359	31	0.547213803	0.634206766	0.634206766	0.547213803
95	4.09701	537	2984081	N	N	N	ENSG00000116833	ENSG00000214836	1	2	198413171	23475488	intron	downstream	NR5A2	AC012506.9	198263393	23474985	+	+	0.64	198334194	23551920	-	-	Y	N	963	1	1	1	0	"Low_complexity,SINE"	-	0.25	0	0.25	2	0.280622463	0.423739919	0.423739919	0.280622463
95	4.09701	537	2863034	N	N	N	ENSG00000116833	ENSG00000214836	1	2	198413171	23475488	intron	downstream	NR5A2	AC012506.9	198263393	23474985	+	+	0	198334303	23551492	+	+	Y	N	963	1	1	1	0	"Low_complexity,SINE"	Low_complexity	0.309734513	0.265625	0.309734513	3	0.317103383	0.359196753	0.359196753	0.317103383
91	4.55024	2370	2587965	N	N	N	ENSG00000118017	ENSG00000133460	3	22	139333919	22561170	intron	intron	A4GNT	SLC2A11	139325252	22521912	-	+	0.786941581	139328060	22528389	-	+	Y	N	963	100	43.33333333	10	3	SINE	Other	0.939501779	1	1	3	0.420933694	0.463027064	0.463027064	0.420933694
91	4.55024	2370	2584869	N	N	N	ENSG00000133460	ENSG00000118017	22	3	22561170	139333919	intron	intron	SLC2A11	A4GNT	22521912	139325252	+	-	0.524115756	22526035	139328076	-	+	Y	N	963	16	10.25	5	4	Other	LINE	1	0.043478261	1	4	0.653850339	0.625788092	0.653850339	0.625788092
89	4.57772	3013	1802845	N	N	N	ENSG00000211547	ENSG00000219584	2	Y	132755208	10621816	downstream	downstream	AC097532.3-1	AC006987.8	132755117	10621462	-	+	0.511177347	132743150	10629090	-	-	Y	N	963	3	1.183098592	1	11	"LTR,LTR,LTR"	"LINE,LINE"	0.394495413	0.839650146	0.839650146	71	0.900798106	0.869929635	0.900798106	0.869929635
89	4.57772	3013	106358	N	N	N	ENSG00000222998	ENSG00000211547	11	2	56976071	132755208	downstream	downstream	7SK	AC097532.3-1	56975739	132755117	+	-	0.679738562	56979506	132745069	+	+	Y	N	963	8	3.103448276	1	19	"SINE,Simple_repeat"	"Low_complexity,Low_complexity,Low_complexity"	0.852941176	0.632911392	0.852941176	29	0.190823275	0.625788092	0.625788092	0.190823275
89	4.57772	3013	100157	N	N	N	ENSG00000222998	ENSG00000218597	11	Y	56976071	10639907	downstream	downstream	7SK	AC010970.1	56975739	10637986	+	-	0.742268041	56979449	10630127	-	+	Y	N	963	14	3.5	1	11	Simple_repeat	"SINE,Simple_repeat"	0.881578947	0.205607477	0.881578947	18	0.213273072	0.507926658	0.507926658	0.213273072
115	4.93543	173	1745763	N	N	N	ENSG00000204716	ENSG00000217463	2	9	94847273	44009877	downstream	upstream	AC073464.5-3	CR848007.2	94840534	43991020	-	-	0.54589372	94838834	44010786	-	+	Y	N	963	8	1.825112108	1	118	-	-	0	0	0	223	0.26097889	0.317103383	0.317103383	0.26097889
115	4.93543	173	1727886	N	N	N	ENSG00000217463	ENSG00000204716	9	2	44009877	94847273	upstream	downstream	CR848007.2	AC073464.5-3	43991020	94840534	-	-	0.653179191	44010678	94838899	-	+	Y	N	963	6	2.37037037	1	20	-	-	0	0	0	27	0.311490934	0.171179702	0.311490934	0.171179702
116	4.94842	6836	1784615	N	N	N	ENSG00000211547	ENSG00000218597	2	Y	132755208	10639907	downstream	downstream	AC097532.3-1	AC010970.1	132755117	10637986	-	-	0.563600783	132747163	10631913	+	+	Y	N	963	8	1.5	1	20	LINE	"Low_complexity,LTR"	0.802083333	0.567567568	0.802083333	58	0.808192693	0.580888498	0.808192693	0.580888498
116	4.94842	6836	1802845	N	N	N	ENSG00000211547	ENSG00000219584	2	Y	132755208	10621816	downstream	downstream	AC097532.3-1	AC006987.8	132755117	10621462	-	+	0.511177347	132743150	10629090	-	-	Y	N	963	3	1.183098592	1	11	"LTR,LTR,LTR"	"LINE,LINE"	0.394495413	0.839650146	0.839650146	71	0.900798106	0.869929635	0.900798106	0.869929635
38	5.38944	2411	1162	N	N	N	ENSG00000175356	ENSG00000137500	11	11	9069731	82675025	intron	upstream	SCUBE2	CCDC90B	8998511	82650152	-	-	0.515759312	9060956	82706566	+	+	N	Y	963	1	1	1	0	LINE	"Other,Simple_repeat"	1	0.866666667	1	2	0.280622463	0.26097889	0.280622463	0.26097889
38	5.38944	2411	22382	N	N	N	ENSG00000175356	ENSG00000137500	11	11	9069731	82675025	intron	upstream	SCUBE2	CCDC90B	8998511	82650152	-	-	0.535891089	9061111	82704310	-	-	N	Y	963	8	6.4	4	5	"LINE,LINE,LINE"	Other	0.93129771	1	1	5	0.589307172	0.423739919	0.589307172	0.423739919
9	5.91011	8589	3946370	N	N	N	ENSG00000220337	ENSG00000221415	1	4	142087113	48895063	downstream	downstream	BX571672.7	AC118282.4-1	142086687	48894981	+	+	0.80754717	142106167	48957552	-	+	Y	N	963	72	6.976190476	1	31	"LTR,SINE,LTR"	"LINE,SINE,SINE,SINE"	0.808333333	0.698156682	0.808333333	42	1.010240866	1.215095264	1.215095264	1.010240866
9	5.91011	8589	3973753	N	N	N	ENSG00000221415	ENSG00000220337	4	1	48895063	142087113	downstream	downstream	AC118282.4-1	BX571672.7	48894981	142086687	+	+	0.446341463	48961801	142101827	-	+	Y	N	963	72	16	2	12	"SINE,LTR"	"LINE,SINE,SINE,SINE"	0.768831169	0.698156682	0.768831169	12	0.850286063	0.819417592	0.850286063	0.819417592
78	7.42289	1232	83695	N	N	N	ENSG00000214243	ENSG00000177685	7	11	101854125	821985	intron	intron	AC073517.6	EFCAB4A	101791064	817618	+	+	0.495049505	101826197	821476	-	-	Y	N	963	1	1	1	0	DNA	LINE	1	0.08	1	1	0.140311231	0.140311231	0.140311231	0.140311231
78	7.42289	1232	2748037	N	N	N	ENSG00000142784	ENSG00000214243	1	7	27507322	101854125	intron	intron	WDTC1	AC073517.6	27433746	101791064	+	+	0.534153005	27490996	101826902	+	+	Y	N	963	5	1.333333333	1	1	SINE	"SINE,LINE"	0.340153453	0.279411765	0.340153453	12	0.970953722	0.822223816	0.970953722	0.822223816
78	7.42289	1232	2693035	N	N	N	ENSG00000142784	ENSG00000177685	1	11	27507322	821985	intron	utr3p	WDTC1	EFCAB4A	27433746	817618	+	+	0.575645756	27491122	821877	-	+	Y	N	963	1	1	1	0	SINE	-	0.118971061	0	0.118971061	6	0.738037077	0.485476861	0.738037077	0.485476861
14	9.05381	2801	2865954	N	N	N	ENSG00000209352	ENSG00000206951	1	2	558776	33024022	upstream	downstream	AC114498.2-9	Y_RNA	558707	33023910	+	-	0	558705	32995167	+	+	Y	N	963	4	3	2	2	-	Simple_repeat	0	1	1	2	0.227304195	0.277816238	0.277816238	0.227304195
14	9.05381	2801	2980086	N	N	N	ENSG00000209343	ENSG00000206951	1	2	555992	33024022	downstream	downstream	AC114498.2-3	Y_RNA	555925	33023910	+	-	0	555994	32995077	-	-	Y	N	963	6	3.666666667	2	3	-	Simple_repeat	0	1	1	3	0.367615426	0.297459811	0.367615426	0.297459811
68	9.19813	697	1750050	N	N	N	ENSG00000134324	ENSG00000196358	2	9	11884982	134109742	intron	intron	LPIN1	NTNG2	11781929	134027155	+	+	0.553903346	11861454	134085169	-	+	Y	N	963	1	1	1	0	-	LINE	0	1	1	4	0.333940731	0.41812747	0.41812747	0.333940731
68	9.19813	697	1716487	N	N	N	ENSG00000134324	ENSG00000196358	2	9	11884982	134109742	intron	intron	LPIN1	NTNG2	11781929	134027155	+	+	0.555555556	11861448	134085313	+	+	Y	N	963	2	1.333333333	1	1	-	LINE	0	1	1	3	0.291847361	0.415321245	0.415321245	0.291847361
68	9.19813	697	5734521	N	N	N	ENSG00000124789	ENSG00000196358	6	9	17814797	134109742	intron	intron	NUP153	NTNG2	17723248	134027155	-	+	0.681127983	17782542	134085420	-	-	Y	N	963	1	1	1	0	SINE	"LINE,SINE,SINE"	0.025157233	0.794019934	0.794019934	3	0.404096347	0.634206766	0.634206766	0.404096347
68	9.19813	697	5698604	N	N	N	ENSG00000196358	ENSG00000124789	9	6	134109742	17814797	intron	intron	NTNG2	NUP153	134027155	17723248	+	-	0.782051282	134085751	17782544	-	+	Y	N	963	1	1	1	0	SINE	LINE	1	0.888888889	1	1	0.140311231	0.075768065	0.140311231	0.075768065
82	9.88328	452	7503554	N	N	N	ENSG00000206951	ENSG00000165553	2	14	33024022	76807408	downstream	intron	Y_RNA	NGB	33023910	76801581	-	-	0.823284823	32994801	76805927	-	+	Y	N	963	12	2.666666667	1	3	Simple_repeat	"Simple_repeat,Simple_repeat,SINE"	1	0.571428571	1	12	0.940085251	0.235722869	0.940085251	0.235722869
82	9.88328	452	7517213	N	N	N	ENSG00000165553	ENSG00000206951	14	2	76807408	33024022	intron	downstream	NGB	Y_RNA	76801581	33023910	-	-	0.825263158	76805870	32995196	-	+	Y	N	963	6	1.771428571	1	15	"Simple_repeat,Simple_repeat,SINE"	Simple_repeat	0.402439024	1	1	35	0.23011042	1.100040055	1.100040055	0.23011042
56	10.7395	20513	1863283	N	N	N	ENSG00000005436	ENSG00000163510	2	2	75791830	180580085	intron	upstream	C2orf3	CWC22	75742802	180517848	-	-	0.541935484	75764724	180685846	-	-	N	Y	963	20	3.363636364	1	5	"LINE,LINE"	-	1	0	1	11	0.844673613	0.698749933	0.844673613	0.698749933
56	10.7395	20513	1812277	N	N	N	ENSG00000219858	ENSG00000005436	2	2	58542671	75791830	upstream	intron	IK	C2orf3	58540931	75742802	-	-	0.514204545	58918232	75764990	+	+	N	Y	963	9	2.428571429	1	2	SINE	LINE	0.400552486	1	1	7	0.738037077	0.788549121	0.788549121	0.738037077
56	10.7395	20513	1864787	N	N	N	ENSG00000219858	ENSG00000119866	2	2	58542671	60634272	upstream	upstream	IK	BCL11A	58540931	60531806	-	-	0.519343494	58912577	60639991	-	-	N	Y	963	1	1	1	0	LINE	"Simple_repeat,SINE?"	0.148984199	0.107579462	0.148984199	7	0.881154533	0.780130447	0.881154533	0.780130447
56	10.7395	20513	1834266	N	N	Y	ENSG00000011566	ENSG00000119866	2	2	39517797	60634272	intron	upstream	MAP4K3	BCL11A	39329930	60531806	-	-	0.555785124	39423640	60640004	-	+	N	N	963	1	1	1	0	LINE	Low_complexity	0.126394052	0.009345794	0.126394052	4	0.429352368	0.443383491	0.443383491	0.429352368
56	10.7395	20513	1817910	N	N	N	ENSG00000011566	ENSG00000163510	2	2	39517797	180580085	intron	upstream	MAP4K3	CWC22	39329930	180517848	-	-	0.536327609	39438186	180685879	+	+	N	Y	963	1	1	1	0	-	-	0	0	0	6	0.822223816	0.620175643	0.822223816	0.620175643
45	10.8702	834	4603811	N	N	N	ENSG00000218597	ENSG00000165416	Y	13	10639907	52160434	downstream	intron	AC010970.1	SUGT1	10637986	52124975	-	+	0.684848485	10629974	52133032	+	+	Y	N	963	4	1.8	1	2	SINE	SINE	0.079646018	1	1	5	0.317103383	0.143117456	0.317103383	0.143117456
45	10.8702	834	9443580	N	N	N	ENSG00000207976	ENSG00000218597	10	Y	98578511	10639907	downstream	downstream	hsa-mir-607	AC010970.1	98578416	10637986	-	-	0.792941176	98551319	10630622	-	-	Y	N	963	4	1.135135135	1	7	"Low_complexity,SINE"	"Low_complexity,Low_complexity,Low_complexity"	0.784140969	0.558375635	0.784140969	74	0.637012991	0.314297158	0.637012991	0.314297158
45	10.8702	834	9581512	N	N	N	ENSG00000165416	ENSG00000207976	13	10	52160434	98578511	intron	downstream	SUGT1	hsa-mir-607	52124975	98578416	+	-	0.832214765	52132968	98551441	-	+	Y	N	963	4	2	1	4	SINE	Low_complexity	1	1	1	7	0.185210826	0.23011042	0.23011042	0.185210826
86	12.0564	1061	8230692	N	N	N	ENSG00000136997	ENSG00000171763	8	15	128822853	43613978	intron	intron	MYC	SPATA5L1	128816862	43481878	+	+	0.580246914	128818456	43592826	-	+	Y	N	963	2	1.333333333	1	1	-	SINE	0	0.718085106	0.718085106	3	0.378840325	0.426546144	0.426546144	0.378840325
86	12.0564	1061	703542	N	N	N	ENSG00000110237	ENSG00000136997	11	8	72757783	128822853	intron	intron	ARHGEF17	MYC	72697317	128816862	+	+	0.539800995	72732331	128818250	-	+	Y	N	963	1	1	1	0	-	-	0	0	0	6	0.923247903	0.676300136	0.923247903	0.676300136
86	12.0564	1061	127	N	N	N	ENSG00000162105	ENSG00000110237	11	11	70536020	72757783	upstream	intron	SHANK2	ARHGEF17	69991609	72697317	-	+	0.495049505	70596341	72732885	+	+	N	Y	963	1	1	1	0	-	-	0	0	0	1	0.140311231	0.140311231	0.140311231	0.140311231
86	12.0564	1061	651727	N	N	N	ENSG00000171763	ENSG00000162105	15	11	43613978	70536020	intron	upstream	SPATA5L1	SHANK2	43481878	69991609	+	-	0.303135889	43592849	70596063	-	-	Y	N	963	4	1.8	1	2	"SINE,LINE"	SINE	0.380434783	1	1	5	0.477058187	0.286234912	0.477058187	0.286234912
105	12.173	122	2904111	N	N	N	ENSG00000206951	ENSG00000220337	2	1	33024022	142087113	downstream	downstream	Y_RNA	BX571672.7	33023910	142086687	-	+	0.711956522	32995014	142122108	-	+	Y	N	963	10	6	2	2	Simple_repeat	Satellite	1	1	1	2	0.145923681	0.350778079	0.350778079	0.145923681
105	12.173	122	2950909	N	N	N	ENSG00000220337	ENSG00000206951	1	2	142087113	33024022	downstream	downstream	BX571672.7	Y_RNA	142086687	33023910	+	-	0.553299492	142122025	32994975	-	+	Y	N	963	10	4.333333333	1	2	Satellite	Simple_repeat	0.733944954	1	1	3	0.426546144	0.457414615	0.457414615	0.426546144
90	12.4592	630	1811050	N	N	N	ENSG00000219497	ENSG00000211547	2	2	5371718	132755208	upstream	downstream	AC073143.1	AC097532.3-1	5371324	132755117	-	-	0.756302521	5490815	132746461	+	+	N	Y	963	8	4.5	1	1	"Simple_repeat,Simple_repeat"	SINE	1	0.633333333	1	2	0.07857429	0.252560217	0.252560217	0.07857429
90	12.4592	630	1861155	N	N	N	ENSG00000219497	ENSG00000211547	2	2	5371718	132755208	upstream	downstream	AC073143.1	AC097532.3-1	5371324	132755117	-	-	0.746268657	5490788	132747064	-	-	N	Y	963	4	1.916666667	1	8	"Simple_repeat,Simple_repeat,SINE"	LINE	0.76	0.286666667	0.76	12	0.140311231	0.420933694	0.420933694	0.140311231
10	12.4833	7282	6607295	N	N	N	ENSG00000219850	ENSG00000219850	9	9	67945195	67945195	downstream	intron	RP11-764K9.4	RP11-764K9.4	67917681	67917681	-	-	0.559352518	67911604	67919064	+	+	N	Y	963	1	1	1	0	SINE	-	0.07073955	0	0.07073955	12	0.87273586	0.684718809	0.87273586	0.684718809
10	12.4833	7282	6628234	N	N	N	ENSG00000219850	ENSG00000219850	9	9	67945195	67945195	downstream	downstream	RP11-764K9.4	RP11-764K9.4	67917681	67917681	-	-	0.678571429	67911892	67912070	-	-	N	Y	963	1	1	1	0	-	-	0	0	0	1	0.098217862	0.213273072	0.213273072	0.098217862
93	12.6356	3148	2980087	N	N	N	ENSG00000217866	ENSG00000206951	1	2	555926	33024022	intron	downstream	RP5-857K21.8	Y_RNA	554883	33023910	+	-	0.652542373	555924	32994800	-	-	Y	N	963	2	2	2	1	-	Simple_repeat	0	1	1	1	0.213273072	0.11505521	0.213273072	0.11505521
93	12.6356	3148	2865954	N	N	N	ENSG00000209352	ENSG00000206951	1	2	558776	33024022	upstream	downstream	AC114498.2-9	Y_RNA	558707	33023910	+	-	0	558705	32995167	+	+	Y	N	963	4	3	2	2	-	Simple_repeat	0	1	1	2	0.227304195	0.277816238	0.277816238	0.227304195
25	12.854	561	8813620	N	N	N	ENSG00000196821	ENSG00000163749	6	4	34772603	77547482	intron	intron	C6orf106	AC034139.7-2	34663050	77453216	-	-	0.50310559	34762968	77541581	-	+	Y	N	963	3	2.333333333	2	3	LINE	-	0.657894737	0	0.657894737	3	0.213273072	0.235722869	0.235722869	0.213273072
25	12.854	561	8791794	N	N	N	ENSG00000163749	ENSG00000220643	4	6	77547482	34762861	intron	intron	AC034139.7-2	RP3-391O22.1	77453216	34762357	-	+	0.770408163	77541507	34762481	-	+	Y	N	963	1	1	1	0	-	SINE	0	0.275862069	0.275862069	2	0.140311231	0.353584303	0.353584303	0.140311231
109	14.509	372	8445250	N	N	N	ENSG00000207985	ENSG00000207985	20	20	26136914	26136914	upstream	upstream	hsa-mir-663	hsa-mir-663	26136822	26136822	-	-	0.576601671	26158751	26159109	+	+	N	Y	963	2	1.375	1	9	-	-	0	0	0	24	0.580888498	0.423739919	0.580888498	0.423739919
109	14.509	372	8336843	N	N	N	ENSG00000207985	ENSG00000096088	20	6	26136914	41823099	upstream	intron	hsa-mir-663	PGC	26136822	41799640	-	-	0.568888889	26159041	41813938	-	+	Y	N	963	3	2.5	2	2	-	Simple_repeat	0	1	1	2	0.280622463	0.269397564	0.280622463	0.269397564
109	14.509	372	8349131	N	N	N	ENSG00000096088	ENSG00000207985	6	20	41823099	26136914	intron	upstream	PGC	hsa-mir-663	41799640	26136822	-	-	0.464285714	41813874	26159091	-	-	Y	N	963	1	1	1	0	Simple_repeat	-	1	0	1	2	0.249753992	0.218885521	0.249753992	0.218885521
37	14.953	839	7139363	N	N	N	ENSG00000112787	ENSG00000090615	12	12	131670437	131915361	upstream	downstream	FBRSL1	GOLGA3	131657121	131855568	+	-	0.496732026	131650876	131854281	+	+	N	Y	963	1	1	1	0	-	SINE	0	1	1	1	0.213273072	0.213273072	0.213273072	0.213273072
37	14.953	839	7156255	N	N	N	ENSG00000112787	ENSG00000090615	12	12	131670437	131915361	upstream	downstream	FBRSL1	GOLGA3	131657121	131855568	+	-	0.68	131651620	131854186	-	-	N	Y	963	1	1	1	0	-	SINE	0	1	1	2	0.420933694	0.244141543	0.420933694	0.244141543
92	14.9976	179	7491126	N	N	N	ENSG00000183576	ENSG00000206951	14	2	99016991	33024022	intron	downstream	SETD3	Y_RNA	98933855	33023910	-	-	0.822510823	98957075	32995196	+	+	Y	N	963	3	1.769230769	1	8	"Simple_repeat,Simple_repeat"	Simple_repeat	0.49382716	1	1	13	0.227304195	0.990597294	0.990597294	0.227304195
92	14.9976	179	7522422	N	N	N	ENSG00000183576	ENSG00000206951	14	2	99016991	33024022	intron	downstream	SETD3	Y_RNA	98933855	33023910	-	-	0	98957038	32995054	-	-	Y	N	963	2	2	2	2	"Simple_repeat,Simple_repeat"	Simple_repeat	1	1	1	2	0.092605413	0.353584303	0.353584303	0.092605413
113	16.6804	351	4547769	N	N	N	ENSG00000128791	ENSG00000112851	18	5	9392384	65412606	utr3p	intron	TWSG1	ERBB2IP	9324851	65258158	+	+	0.622516556	9391604	65382073	-	+	Y	N	963	10	10	10	1	-	SINE	0	1	1	1	0.210466847	0.210466847	0.210466847	0.210466847
113	16.6804	351	4548999	N	N	N	ENSG00000112851	ENSG00000128791	5	18	65412606	9392384	intron	utr3p	ERBB2IP	TWSG1	65258158	9324851	+	+	0.521052632	65381980	9391346	-	+	Y	N	963	20	17	14	2	SINE	-	1	0	1	2	0.252560217	0.277816238	0.277816238	0.252560217
17	18.2721	3388	2888843	N	N	N	ENSG00000162676	ENSG00000211547	1	2	92725021	132755208	downstream	downstream	GFI1	AC097532.3-1	92712907	132755117	-	-	0.81512605	92693694	132746422	+	+	Y	N	963	4	4	4	1	"Simple_repeat,LINE"	SINE	0.96	0.264705882	0.96	1	0.140311231	0.190823275	0.190823275	0.140311231
17	18.2721	3388	3227287	N	N	N	ENSG00000162676	ENSG00000207986	1	16	92725021	33869267	downstream	upstream	GFI1	AC136932.4-2	92712907	33869153	-	+	0.520408163	92693649	33860173	-	+	Y	N	963	1	1	1	0	"Simple_repeat,LINE"	LINE	0.936170213	0.4	0.936170213	1	0.131892558	0.140311231	0.140311231	0.131892558
17	18.2721	3388	5120548	N	N	N	ENSG00000211547	ENSG00000207986	2	16	132755208	33869267	downstream	upstream	AC097532.3-1	AC136932.4-2	132755117	33869153	-	+	0.5046875	132743155	33860097	-	-	Y	N	963	8	1.211538462	1	4	"LTR,LTR,LTR"	LINE	0.399380805	0.819620253	0.819620253	52	0.889573207	0.839061164	0.889573207	0.839061164
54	18.2874	7737	3945919	N	N	N	ENSG00000217764	ENSG00000221256	1	4	141768758	49291847	downstream	downstream	RP11-423O2.6	AC119751.3-3	141745055	49291765	+	-	0.561344538	141780529	49212930	-	+	Y	N	963	40	23.42857143	10	7	SINE	Satellite	0.630769231	0.104790419	0.630769231	7	0.505120433	0.726812179	0.726812179	0.505120433
54	18.2874	7737	3065970	N	Y	N	ENSG00000217764	ENSG00000217764	1	1	141768758	141768758	downstream	downstream	RP11-423O2.6	RP11-423O2.6	141745055	141745055	+	+	0.448214286	141789213	141785028	-	+	N	N	963	30	15.77777778	6	18	"LINE,LINE"	SINE	0.46969697	0.93559322	0.93559322	18	0.617369418	0.704362382	0.704362382	0.617369418
54	18.2874	7737	3074786	N	Y	N	ENSG00000222289	ENSG00000217764	1	1	142279986	141768758	upstream	downstream	BX004987.9-1	RP11-423O2.6	142279905	141745055	-	+	0.5	142296987	141789487	-	+	N	N	963	24	15	6	2	SINE	LINE	0.770992366	0.825757576	0.825757576	2	0.263785115	0.280622463	0.280622463	0.263785115
54	18.2874	7737	3977196	N	N	N	ENSG00000221256	ENSG00000222289	4	1	49291847	142279986	downstream	upstream	AC119751.3-3	BX004987.9-1	49291765	142279905	-	-	0.55423477	49210284	142296669	-	+	Y	N	963	112	26.85	1	19	Satellite	-	0.686327078	0	0.686327078	20	0.844673613	0.718393505	0.844673613	0.718393505
76	18.9308	7374	4694231	N	N	N	ENSG00000123178	ENSG00000123178	13	13	49408477	49408477	upstream	upstream	C13orf1	C13orf1	49384843	49384843	-	-	0.355932203	49422337	49422461	+	+	N	Y	963	1	1	1	0	-	-	0	0	0	1	0.213273072	0.11505521	0.213273072	0.11505521
76	18.9308	7374	4701292	N	N	N	ENSG00000123178	ENSG00000123178	13	13	49408477	49408477	upstream	upstream	C13orf1	C13orf1	49384843	49384843	-	-	0	49418685	49418739	-	-	N	Y	963	1	1	1	0	-	-	0	0	0	1	0.207660623	0.213273072	0.213273072	0.207660623
66	19.3745	3629	7753771	N	Y	N	ENSG00000206195	ENSG00000215394	14	14	18995329	18754290	intron	intron	AL589182.4-3	AL589743.4-2	18961097	18720037	-	+	0.527777778	18966941	18748435	-	+	N	N	963	4	4	4	1	-	-	0	0	0	1	0.213273072	0.18801705	0.213273072	0.18801705
66	19.3745	3629	7753411	N	N	Y	ENSG00000215394	ENSG00000206195	14	14	18754290	18995329	intron	intron	AL589743.4-2	AL589182.4-3	18720037	18961097	+	-	0.8203125	18750348	18965225	-	+	N	N	963	9	9	9	1	-	-	0	0	0	1	0.213273072	0.143117456	0.213273072	0.143117456