# Linking Disease Associations with Regulatory Information in the Human Genome # ---------------------------------------------------------------------------- # # Marc A. Schaub, Alan P. Boyle, Anshul Kundaje, Serafim Batzoglou, Michael Snyder, Stanford University # Contact: marc.schaub@cs.stanford.edu # # List of Functional SNPs # ----------------------- # # An interactive version of this list can be found at http://regulomedb.org/GWAS/ # # This list contains all functional SNPs (in a transcribed region in GENCODE v7 or # overlapping regulatory information in RegulomeDB. For associations found in populations # of European descent, all functional SNPs in strong LD (r^2 >= 0.8) in CEU are listed. # For other associations, all functional SNPs in strong LD (r^2 >= 0.8) in CEU, YRI, CHB # and JPT are listed. # # Format: # - Each lead SNP is described in one block, with an empty line marking the end of the # block corresponding to the lead SNP # - The first line describes the lead SNP (line starting with LEAD_SNP) # - Associations are then described one per line (line starting with ASSOCIATION). There # may be multiple associations for one lead SNP # - Functional SNPs are then described one per line (line starting with FUNCTIONAL_SNP). # - Lines are tab delimited # - SNPs contain the following fields: rsid, chromosome, position (hg19), GENCODE # information (Intergenic, Intron, Exon,non-coding or Coding), RegulomeDB score, distance # to lead SNP (if not lead SNP), LD with lead SNP (if not lead SNP). # - LD information is presented as a comma-separated list of Population:D';r2 for all # populations with r2 with lead SNP >= 0.5. LD data comes from HapMap 2. # - Associations contain the following fields: pubmed_id, phenotype, -log(10) of the # P-value, nearest gene. Information comes from the NHGRI GWAS catalog. # LEAD_SNP rs3934834 chr1 1005806 Intergenic 5b ASSOCIATION 19851299 Body mass index 6.22184874962 AGRN - C1orf159 FUNCTIONAL_SNP rs10907177 chr1 1021346 Coding 5b 15540 CEU:0.898;0.806, CHB:0.832;0.64, JPT:1.0;0.737 FUNCTIONAL_SNP rs3766191 chr1 1017587 Exon,non-coding 5b 11781 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;0.91 LEAD_SNP rs3753242 chr1 2069681 Intron 4 ASSOCIATION 21107309 Reasoning 6.0 PRKCZ LEAD_SNP rs734999 chr1 2513216 Intron 4 ASSOCIATION 21297633 Ulcerative colitis 8.52287874528 TNFRSF14 - C1orf93 FUNCTIONAL_SNP rs2495365 chr1 2498027 Exon,non-coding 2b 15189 CEU:1.0;0.96, CHB:1.0;0.953, JPT:1.0;0.953, YRI:1.0;0.577 FUNCTIONAL_SNP rs2147905 chr1 2482921 Exon,non-coding 5b 30295 CEU:0.959;0.883, CHB:1.0;0.953, JPT:0.95;0.859 FUNCTIONAL_SNP rs4486391 chr1 2513055 Exon,non-coding 5b 161 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs1886730 chr1 2488608 Intron 2b 24608 CEU:0.919;0.844, CHB:0.943;0.732, JPT:0.938;0.657, YRI:0.886;0.585 FUNCTIONAL_SNP rs6667605 chr1 2502780 Intron 4 10436 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.953 FUNCTIONAL_SNP rs6672381 chr1 2502834 Intron 4 10382 CEU:1.0;1.0, CHB:1.0;0.952, JPT:0.952;0.905 FUNCTIONAL_SNP rs7550231 chr1 2497641 Intergenic 5b 15575 CEU:1.0;0.96, CHB:1.0;0.953, JPT:1.0;0.953 FUNCTIONAL_SNP rs2234161 chr1 2491205 Intron 5b 22011 CEU:0.96;0.921, CHB:1.0;0.953, JPT:0.95;0.859 FUNCTIONAL_SNP rs10797434 chr1 2511280 Intergenic 5b 1936 CEU:1.0;1.0, CHB:1.0;0.953, JPT:0.952;0.905 FUNCTIONAL_SNP rs2257763 chr1 2490898 Intron 5b 22318 CEU:0.958;0.881, CHB:1.0;0.952, JPT:0.902;0.813 FUNCTIONAL_SNP rs10797432 chr1 2501338 Intron 5b 11878 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2281852 chr1 2490942 Intron 5b 22274 CEU:0.958;0.882, CHB:1.0;0.868, JPT:0.948;0.817 FUNCTIONAL_SNP rs6671426 chr1 2504234 Intron 6 8982 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.784 FUNCTIONAL_SNP rs4648648 chr1 2512452 Intergenic 6 764 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs3748816 chr1 2526746 Coding 4 ASSOCIATION 20190752 Celiac disease 8.52287874528 MMEL1 FUNCTIONAL_SNP rs10797440 chr1 2541269 Coding 4 14523 CEU:1.0;0.91, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs10910111 chr1 2542653 Intron 2b 15907 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.861;0.71 FUNCTIONAL_SNP rs4648356 chr1 2709164 Intergenic 4 182418 CEU:1.0;0.954, CHB:0.95;0.862, JPT:0.894;0.726 FUNCTIONAL_SNP rs2843402 chr1 2528682 Intron 4 1936 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.687 FUNCTIONAL_SNP rs3748817 chr1 2525665 Intron 4 1081 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4310388 chr1 2507415 Intron 4 19331 CEU:1.0;0.873, CHB:1.0;0.756, JPT:1.0;0.867 FUNCTIONAL_SNP rs6684865 chr1 2546229 Intron 5b 19483 CEU:1.0;0.954, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs2843401 chr1 2528133 Intron 5b 1387 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.635 FUNCTIONAL_SNP rs10910099 chr1 2533552 Intron 5b 6806 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:0.948;0.643 FUNCTIONAL_SNP rs10910105 chr1 2538209 Intron 5b 11463 CEU:1.0;0.954, CHB:1.0;0.954, JPT:1.0;0.952 FUNCTIONAL_SNP rs10752747 chr1 2524915 Intron 5b 1831 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.66 FUNCTIONAL_SNP rs2764841 chr1 2529360 Intron 5b 2614 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2764845 chr1 2528999 Intron 5b 2253 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10797441 chr1 2551660 Intron 5b 24914 CEU:1.0;0.954, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs2843403 chr1 2529097 Intron 5b 2351 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10752748 chr1 2544640 Intron 5b 17894 CEU:1.0;0.954, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs4073286 chr1 2539901 Intron 5b 13155 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs3748819 chr1 2524966 Intron 5b 1780 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs897628 chr1 2716624 Intergenic 5b 189878 CEU:1.0;0.953, CHB:0.95;0.862, JPT:0.894;0.726 FUNCTIONAL_SNP rs4445406 chr1 2539400 Intron 5b 12654 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6698817 chr1 2564183 Intron 5b 37437 CEU:1.0;0.952, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs867436 chr1 2523723 Intron 5b 3023 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs10797437 chr1 2539006 Intron 5b 12260 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs3890745 chr1 2553624 Intron 6 26878 CEU:1.0;0.954, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs2843404 chr1 2530558 Intron 6 3812 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.687 FUNCTIONAL_SNP rs4474198 chr1 2553758 Intron 6 27012 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs2985857 chr1 2532624 Intron 7 5878 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.687 FUNCTIONAL_SNP rs2985859 chr1 2532416 Intron 7 5670 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.66 FUNCTIONAL_SNP rs6673993 chr1 2552071 Intron 7 25325 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs6424092 chr1 2532899 Intron 7 6153 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.687 FUNCTIONAL_SNP rs2985855 chr1 2531372 Intron 7 4626 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.687 LEAD_SNP rs3890745 chr1 2553624 Intron 6 ASSOCIATION 20453842 Rheumatoid arthritis 5.39794000867 MMEL1 ASSOCIATION 18794853 Rheumatoid arthritis 7.0 MMEL1 FUNCTIONAL_SNP rs10797440 chr1 2541269 Coding 4 12355 CEU:1.0;0.953, CHB:0.953;0.908, JPT:1.0;0.953, YRI:1.0;0.53 FUNCTIONAL_SNP rs3748816 chr1 2526746 Coding 4 26878 CEU:1.0;0.954, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs10910111 chr1 2542653 Intron 2b 10971 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.952 FUNCTIONAL_SNP rs4648356 chr1 2709164 Intergenic 4 155540 CEU:1.0;1.0, CHB:1.0;0.91, JPT:0.946;0.775, YRI:1.0;0.864 FUNCTIONAL_SNP rs2843402 chr1 2528682 Intron 4 24942 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.672 FUNCTIONAL_SNP rs3748817 chr1 2525665 Intron 4 27959 CEU:1.0;0.953, CHB:1.0;0.953, JPT:1.0;0.952 FUNCTIONAL_SNP rs4310388 chr1 2507415 Intron 4 46209 CEU:1.0;0.833, CHB:1.0;0.792, JPT:1.0;0.909, YRI:0.926;0.857 FUNCTIONAL_SNP rs6684865 chr1 2546229 Intron 5b 7395 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2843401 chr1 2528133 Intron 5b 25491 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.73 FUNCTIONAL_SNP rs10910099 chr1 2533552 Intron 5b 20072 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.71 FUNCTIONAL_SNP rs10910105 chr1 2538209 Intron 5b 15415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10752747 chr1 2524915 Intron 5b 28709 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.701 FUNCTIONAL_SNP rs2764841 chr1 2529360 Intron 5b 24264 CEU:1.0;0.954, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs2764845 chr1 2528999 Intron 5b 24625 CEU:1.0;0.954, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs10797441 chr1 2551660 Intron 5b 1964 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2843403 chr1 2529097 Intron 5b 24527 CEU:1.0;0.954, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs10752748 chr1 2544640 Intron 5b 8984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4073286 chr1 2539901 Intron 5b 13723 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.53 FUNCTIONAL_SNP rs3748819 chr1 2524966 Intron 5b 28658 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs897628 chr1 2716624 Intergenic 5b 163000 CEU:1.0;1.0, CHB:1.0;0.91, JPT:0.946;0.775, YRI:1.0;0.864 FUNCTIONAL_SNP rs4445406 chr1 2539400 Intron 5b 14224 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.964 FUNCTIONAL_SNP rs6698817 chr1 2564183 Intron 5b 10559 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.926 FUNCTIONAL_SNP rs867436 chr1 2523723 Intron 5b 29901 CEU:1.0;0.954, CHB:0.953;0.908, JPT:1.0;0.953, YRI:0.955;0.701 FUNCTIONAL_SNP rs10797437 chr1 2539006 Intron 5b 14618 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.53 FUNCTIONAL_SNP rs2843404 chr1 2530558 Intron 6 23066 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.672 FUNCTIONAL_SNP rs4474198 chr1 2553758 Intron 6 134 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.53 FUNCTIONAL_SNP rs2985857 chr1 2532624 Intron 7 21000 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.672 FUNCTIONAL_SNP rs2985859 chr1 2532416 Intron 7 21208 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.7 FUNCTIONAL_SNP rs6673993 chr1 2552071 Intron 7 1553 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.53 FUNCTIONAL_SNP rs6424092 chr1 2532899 Intron 7 20725 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.672 FUNCTIONAL_SNP rs2985855 chr1 2531372 Intron 7 22252 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.672 LEAD_SNP rs2651899 chr1 3083712 Intron 5b ASSOCIATION 21666692 Migraine 8.39794000867 PRDM16 FUNCTIONAL_SNP rs10909887 chr1 3087373 Intron 2b 3661 CEU:1.0;1.0, YRI:1.0;0.621 FUNCTIONAL_SNP rs1736522 chr1 3080940 Intron 4 2772 CEU:1.0;1.0 FUNCTIONAL_SNP rs1798246 chr1 3080855 Intron 5b 2857 CEU:1.0;1.0 FUNCTIONAL_SNP rs868718 chr1 3096355 Intron 5b 12643 CEU:1.0;1.0 FUNCTIONAL_SNP rs2742673 chr1 3080019 Intron 5b 3693 CEU:1.0;1.0, YRI:1.0;0.621 LEAD_SNP rs6658356 chr1 3280253 Intron 5b ASSOCIATION 20339536 Response to statin therapy 5.69897000434 PRDM16 FUNCTIONAL_SNP rs11807862 chr1 3279268 Intron 2c 985 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.61 FUNCTIONAL_SNP rs17399569 chr1 3278959 Intron 5b 1294 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs966321 chr1 4315204 Intergenic 7 ASSOCIATION 17903294 Factor VII 5.09691001301 C1orf174 - AJAP1 LEAD_SNP rs7513590 chr1 5170712 Intergenic 7 ASSOCIATION 19260139 Anthropometric traits 5.30102999566 AJAP1 - NPHP4 LEAD_SNP rs846111 chr1 6279370 Coding 5b ASSOCIATION 19305408 QT interval 16.0 RNF207 ASSOCIATION 19305409 QT interval 15.3979400087 RNF207 LEAD_SNP rs11587438 chr1 6631431 Intron 5a ASSOCIATION 21738478 White blood cell types 5.39794000867 TAS1R1 LEAD_SNP rs2797685 chr1 7879063 Intron 6 ASSOCIATION 21102463 Crohn's disease 8.15490195999 PER3 FUNCTIONAL_SNP rs2640908 chr1 7889941 Coding 7 10878 CEU:1.0;0.945, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.783 FUNCTIONAL_SNP rs1773138 chr1 7891797 Intron 4 12734 CEU:1.0;0.94, CHB:0.953;0.908, JPT:1.0;1.0, YRI:1.0;0.783 FUNCTIONAL_SNP rs707472 chr1 7906008 Intron 5b 26945 CEU:1.0;0.945, CHB:0.953;0.908, JPT:1.0;1.0, YRI:0.912;0.708 FUNCTIONAL_SNP rs3753503 chr1 7841971 Intergenic 5b 37092 CEU:0.944;0.89, CHB:1.0;0.616, JPT:0.935;0.639 FUNCTIONAL_SNP rs2071987 chr1 7834026 Intron 5b 45037 CEU:0.944;0.89, CHB:1.0;0.616, JPT:1.0;0.693 FUNCTIONAL_SNP rs707462 chr1 7849880 Intron 6 29183 CEU:0.943;0.841, CHB:1.0;0.681, JPT:1.0;0.772, YRI:1.0;0.783 FUNCTIONAL_SNP rs707467 chr1 7861684 Intron 6 17379 CEU:1.0;0.945, CHB:0.943;0.89, JPT:1.0;1.0, YRI:1.0;0.706 FUNCTIONAL_SNP rs1689904 chr1 7890801 Intron 7 11738 CEU:1.0;0.94, CHB:0.953;0.908, JPT:1.0;1.0, YRI:1.0;0.783 FUNCTIONAL_SNP rs41402249 chr1 7822723 Intron 7 56340 CEU:0.943;0.841 FUNCTIONAL_SNP rs697693 chr1 7886424 Intron 7 7361 CEU:0.943;0.841, CHB:0.953;0.908, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs35675666 chr1 8021973 Exon,non-coding 4 ASSOCIATION 21297633 Ulcerative colitis 8.30102999566 PARK7 FUNCTIONAL_SNP rs397349 chr1 8074872 Exon,non-coding 5a 52899 CEU:1.0;0.933 FUNCTIONAL_SNP rs3766606 chr1 8022197 Intron 2b 224 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10489450 chr1 8079301 Intron 4 57328 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6577459 chr1 8100173 Intron 5a 78200 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;0.585 FUNCTIONAL_SNP rs1883679 chr1 8100451 Intron 5a 78478 CEU:1.0;0.933 FUNCTIONAL_SNP rs4908724 chr1 8119251 Intron 5b 97278 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7539255 chr1 8133352 Intron 5b 111379 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs225132 chr1 8095500 Intron 5b 73527 CEU:1.0;0.933 FUNCTIONAL_SNP rs12736494 chr1 8136016 Intron 5b 114043 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17367289 chr1 8053135 Intergenic 5b 31162 CEU:1.0;0.933 FUNCTIONAL_SNP rs161802 chr1 8042826 Intron 6 20853 CEU:1.0;0.933 FUNCTIONAL_SNP rs2493214 chr1 7994420 Intron 6 27553 CEU:0.929;0.863 FUNCTIONAL_SNP rs7517357 chr1 8025275 Intron 6 3302 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4908727 chr1 8163122 Intron 6 141149 CEU:0.928;0.803 FUNCTIONAL_SNP rs7545677 chr1 8165619 Intron 6 143646 CEU:0.927;0.802 FUNCTIONAL_SNP rs28624 chr1 8084355 Intron 6 62382 CEU:1.0;0.933 FUNCTIONAL_SNP rs12727642 chr1 8046672 Intergenic 6 24699 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2050198 chr1 8111839 Intron 7 89866 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4325151 chr1 8168917 Intron 7 146944 CEU:0.928;0.803 FUNCTIONAL_SNP rs12730860 chr1 8132462 Intron 7 110489 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12748993 chr1 8129507 Intron 7 107534 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6703955 chr1 8165975 Intron 7 144002 CEU:0.928;0.803 FUNCTIONAL_SNP rs4369247 chr1 8168993 Intron 7 147020 CEU:0.928;0.803 FUNCTIONAL_SNP rs12128234 chr1 8170219 Intron 7 148246 CEU:0.928;0.803 FUNCTIONAL_SNP rs7522911 chr1 8097145 Intron 7 75172 CEU:1.0;0.854, CHB:1.0;0.789, JPT:1.0;1.0 LEAD_SNP rs12727642 chr1 8046672 Intergenic 6 ASSOCIATION 20190752 Celiac disease 7.04575749056 PARK7 - ERRFI1 FUNCTIONAL_SNP rs35675666 chr1 8021973 Exon,non-coding 4 24699 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs397349 chr1 8074872 Exon,non-coding 5a 28200 CEU:1.0;1.0 FUNCTIONAL_SNP rs3766606 chr1 8022197 Intron 2b 24475 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12753070 chr1 8114319 Intron 4 67647 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10489450 chr1 8079301 Intron 4 32629 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1883679 chr1 8100451 Intron 5a 53779 CEU:1.0;1.0 FUNCTIONAL_SNP rs6577459 chr1 8100173 Intron 5a 53501 CEU:1.0;0.862, CHB:1.0;0.822, JPT:1.0;0.585 FUNCTIONAL_SNP rs225132 chr1 8095500 Intron 5b 48828 CEU:1.0;1.0 FUNCTIONAL_SNP rs4908724 chr1 8119251 Intron 5b 72579 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7539255 chr1 8133352 Intron 5b 86680 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12736494 chr1 8136016 Intron 5b 89344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17367289 chr1 8053135 Intergenic 5b 6463 CEU:1.0;1.0 FUNCTIONAL_SNP rs161802 chr1 8042826 Intron 6 3846 CEU:1.0;1.0 FUNCTIONAL_SNP rs2493214 chr1 7994420 Intron 6 52252 CEU:0.928;0.804 FUNCTIONAL_SNP rs7517357 chr1 8025275 Intron 6 21397 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4908727 chr1 8163122 Intron 6 116450 CEU:0.931;0.812 FUNCTIONAL_SNP rs7545677 chr1 8165619 Intron 6 118947 CEU:0.931;0.811 FUNCTIONAL_SNP rs28624 chr1 8084355 Intron 6 37683 CEU:1.0;1.0 FUNCTIONAL_SNP rs2050198 chr1 8111839 Intron 7 65167 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4325151 chr1 8168917 Intron 7 122245 CEU:0.931;0.811 FUNCTIONAL_SNP rs7522911 chr1 8097145 Intron 7 50473 CEU:1.0;0.854, CHB:1.0;0.822, JPT:1.0;1.0 FUNCTIONAL_SNP rs12730860 chr1 8132462 Intron 7 85790 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12748993 chr1 8129507 Intron 7 82835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6703955 chr1 8165975 Intron 7 119303 CEU:0.931;0.812 FUNCTIONAL_SNP rs4369247 chr1 8168993 Intron 7 122321 CEU:0.931;0.812 FUNCTIONAL_SNP rs12128234 chr1 8170219 Intron 7 123547 CEU:0.931;0.812 LEAD_SNP rs4908760 chr1 8526142 Intron 7 ASSOCIATION 20410501 Vitiligo 14.15490196 RERE FUNCTIONAL_SNP rs6577499 chr1 8612104 Intron 2b 85962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2401138 chr1 8704059 Intron 4 177917 CEU:0.953;0.832, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs7530745 chr1 8557691 Intron 4 31549 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;0.807 FUNCTIONAL_SNP rs6577514 chr1 8712743 Intron 4 186601 CEU:0.95;0.82 FUNCTIONAL_SNP rs4480384 chr1 8659714 Intron 4 133572 CEU:1.0;0.916, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs11121194 chr1 8569906 Intron 5a 43764 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11121201 chr1 8632791 Intron 5a 106649 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10864356 chr1 8569871 Intron 5a 43729 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7537982 chr1 8644007 Intron 5a 117865 CEU:1.0;0.916, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs2016084 chr1 8613418 Intron 5a 87276 CEU:1.0;0.914, CHB:1.0;0.694, JPT:1.0;0.79 FUNCTIONAL_SNP rs6577496 chr1 8581227 Intron 5a 55085 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897 FUNCTIONAL_SNP rs6577502 chr1 8615577 Intron 5a 89435 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12136766 chr1 8663821 Intron 5a 137679 CEU:1.0;0.875, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs1953827 chr1 8679848 Intron 5b 153706 CEU:1.0;0.875, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs11121212 chr1 8725993 Intron 5b 199851 CEU:0.912;0.832, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs10864360 chr1 8724522 Intron 5b 198380 CEU:0.912;0.832, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs301814 chr1 8510577 Intron 5b 15565 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1463052 chr1 8701231 Intron 5b 175089 CEU:1.0;0.875, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs1463053 chr1 8705037 Intron 5b 178895 CEU:0.953;0.832, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs6681362 chr1 8658527 Intron 5b 132385 CEU:1.0;0.908, CHB:0.859;0.739, JPT:1.0;1.0 FUNCTIONAL_SNP rs1934138 chr1 8645816 Intron 5b 119674 CEU:1.0;0.916, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs1318218 chr1 8658712 Intron 5b 132570 CEU:1.0;0.913, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs7513420 chr1 8681044 Intron 5b 154902 CEU:0.952;0.828, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs6577488 chr1 8534529 Intron 5b 8387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6663123 chr1 8642931 Intron 5b 116789 CEU:1.0;0.916, CHB:1.0;0.897, JPT:1.0;0.896 FUNCTIONAL_SNP rs11121202 chr1 8639357 Intron 6 113215 CEU:1.0;0.916, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs11121204 chr1 8654305 Intron 6 128163 CEU:1.0;0.916, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs10779704 chr1 8693537 Intron 6 167395 CEU:0.946;0.81, CHB:0.885;0.784, JPT:1.0;1.0 FUNCTIONAL_SNP rs6669503 chr1 8564301 Intron 6 38159 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4908761 chr1 8552219 Intron 6 26077 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6701331 chr1 8670206 Intron 6 144064 CEU:1.0;0.875, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs7526171 chr1 8650185 Intron 6 124043 CEU:1.0;0.876, CHB:1.0;0.789, JPT:1.0;1.0 FUNCTIONAL_SNP rs12046643 chr1 8547866 Intron 6 21724 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6577513 chr1 8702753 Intron 6 176611 CEU:0.903;0.815, CHB:1.0;0.887, JPT:1.0;1.0 FUNCTIONAL_SNP rs12131864 chr1 8591162 Intron 7 65020 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1381928 chr1 8690933 Intron 7 164791 CEU:1.0;0.916, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs11121210 chr1 8708529 Intron 7 182387 CEU:1.0;0.875, CHB:0.885;0.784, JPT:1.0;1.0 FUNCTIONAL_SNP rs7551849 chr1 8539463 Intron 7 13321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6670508 chr1 8647917 Intron 7 121775 CEU:1.0;0.916, CHB:0.886;0.785, JPT:1.0;1.0 FUNCTIONAL_SNP rs1061039 chr1 8642588 Intron 7 116446 CEU:1.0;0.916, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs1024197 chr1 8537058 Intron 7 10916 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6668508 chr1 8574118 Intron 7 47976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10864354 chr1 8549741 Intron 7 23599 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1463049 chr1 8597108 Intron 7 70966 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0 FUNCTIONAL_SNP rs1463051 chr1 8596893 Intron 7 70751 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7520025 chr1 8698277 Intron 7 172135 CEU:0.954;0.87, CHB:0.885;0.782, JPT:1.0;1.0 FUNCTIONAL_SNP rs6577491 chr1 8574972 Intron 7 48830 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7542312 chr1 8573471 Intron 7 47329 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1473420 chr1 8616838 Intron 7 90696 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1922983 chr1 8531326 Intron 7 5184 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12080583 chr1 8524877 Intron 7 1265 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6702060 chr1 8607024 Intron 7 80882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6675443 chr1 8651582 Intron 7 125440 CEU:1.0;0.904, CHB:0.872;0.675, JPT:1.0;1.0 LEAD_SNP rs12025126 chr1 8759554 Intron 6 ASSOCIATION 20548946 Vertical cup-disc ratio 7.22184874962 RERE FUNCTIONAL_SNP rs10864363 chr1 8767311 Intron 4 7757 CEU:0.956;0.914, CHB:1.0;0.897, JPT:0.925;0.856 FUNCTIONAL_SNP rs12567502 chr1 8808820 Intron 6 49266 CEU:1.0;0.833, CHB:1.0;0.904, JPT:0.849;0.721 FUNCTIONAL_SNP rs7524437 chr1 8856603 Intron 7 97049 CEU:1.0;0.957, CHB:1.0;0.904, JPT:0.849;0.721 FUNCTIONAL_SNP rs12029088 chr1 8708876 Intron 7 50678 CEU:1.0;0.873, CHB:1.0;1.0, JPT:1.0;0.867 LEAD_SNP rs10492972 chr1 10353112 Intron 6 ASSOCIATION 18997785 Multiple sclerosis 9.52287874528 KIF1B FUNCTIONAL_SNP rs1002076 chr1 10438892 Exon,non-coding 4 85780 CEU:1.0;0.957, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs6696056 chr1 10305992 Intron 5a 47120 CEU:1.0;0.873, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;0.815 FUNCTIONAL_SNP rs12120191 chr1 10345772 Intron 5a 7340 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.883 FUNCTIONAL_SNP rs10492973 chr1 10398985 Intron 5b 45873 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs4846207 chr1 10313811 Intron 5b 39301 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12737239 chr1 10323973 Intron 5b 29139 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12757288 chr1 10323921 Intron 5b 29191 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs746881 chr1 10346810 Intron 5b 6302 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1556917 chr1 10400990 Intron 5b 47878 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs1538557 chr1 10297230 Intron 5b 55882 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10492971 chr1 10342975 Intron 6 10137 CEU:1.0;0.877, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs12131441 chr1 10428952 Intron 6 75840 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs4846197 chr1 10282166 Intron 6 70946 CEU:1.0;0.877, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs17034643 chr1 10332102 Intron 6 21010 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9332414 chr1 10326963 Intron 6 26149 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.846 FUNCTIONAL_SNP rs3748577 chr1 10357406 Intron 6 4294 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12130563 chr1 10428452 Intron 6 75340 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs6541089 chr1 10402785 Intron 6 49673 CEU:1.0;0.871, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs946501 chr1 10309580 Intron 6 43532 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12127604 chr1 10352800 Intron 6 312 CEU:1.0;0.905, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1555849 chr1 10400602 Intron 6 47490 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs2039778 chr1 10354601 Intron 6 1489 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12120042 chr1 10345325 Intron 6 7787 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2185252 chr1 10415912 Intron 7 62800 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs4529713 chr1 10307295 Intron 7 45817 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs17034821 chr1 10414645 Intron 7 61533 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs4240911 chr1 10307453 Intron 7 45659 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs4846209 chr1 10322054 Intron 7 31058 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs11582123 chr1 10303942 Intron 7 49170 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2182326 chr1 10385664 Intron 7 32552 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.853 FUNCTIONAL_SNP rs7553228 chr1 10350438 Intron 7 2674 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12141416 chr1 10327867 Intron 7 25245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11121551 chr1 10435170 Intron 7 82058 CEU:1.0;0.877, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs1556916 chr1 10403482 Intron 7 50370 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.853 LEAD_SNP rs17401966 chr1 10385471 Intron 6 ASSOCIATION 20676096 Hepatocellular carcinoma 17.6989700043 KIF1B FUNCTIONAL_SNP rs12402052 chr1 10318652 Coding 5b 66819 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11121552 chr1 10435324 Coding 7 49853 CEU:1.0;1.0, CHB:0.939;0.831, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4846210 chr1 10322153 Intron 5a 63318 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4846208 chr1 10313839 Intron 5b 71632 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17401924 chr1 10384439 Intron 6 1032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11576866 chr1 10414432 Intron 7 28961 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12741973 chr1 10638604 Intron 6 ASSOCIATION 20395239 Optic disc size (rim) 5.15490195999 PEX14 FUNCTIONAL_SNP rs6687430 chr1 10633245 Intron 7 5359 CEU:1.0;1.0 LEAD_SNP rs880315 chr1 10796866 Intron 5b ASSOCIATION 21572416 Blood pressure 9.52287874528 CASZ1 ASSOCIATION 21572416 Blood pressure 6.15490195999 CASZ1 LEAD_SNP rs12046278 chr1 10799577 Intron 5b ASSOCIATION 19430479 Systolic blood pressure 5.30102999566 CASZ1 LEAD_SNP rs17036350 chr1 11171226 Intron 7 ASSOCIATION 21665993 Corneal curvature 12.3979400087 MTOR LEAD_SNP rs4846033 chr1 11788564 Intergenic 5a ASSOCIATION 18347602 Schizophrenia 5.39794000867 C1orf187 - AGTRAP LEAD_SNP rs17375901 chr1 11852516 Intron 5b ASSOCIATION 19597492 Atrial fibrillation 6.22184874962 MTHFR LEAD_SNP rs1801133 chr1 11856378 Coding 4 ASSOCIATION 20031578 Plasma homocysteine 34.096910013 MTHFR LEAD_SNP rs17367504 chr1 11862778 Intron 4 ASSOCIATION 19430483 Systolic blood pressure 12.6989700043 MTHFR FUNCTIONAL_SNP rs3753584 chr1 11864586 Exon,non-coding 4 1808 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs13306561 chr1 11865804 Intron 4 3026 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17037390 chr1 11860843 Intron 4 1935 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2050265 chr1 11879699 Intron 5a 16921 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12567136 chr1 11883731 Intron 5b 20953 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7537765 chr1 11887303 Intron 6 24525 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17037429 chr1 11873787 Intron 6 11009 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17037452 chr1 11895675 Intron 7 32897 CEU:0.915;0.838, CHB:1.0;0.877, JPT:1.0;0.877 LEAD_SNP rs1023252 chr1 11899033 Coding 4 ASSOCIATION 21273288 Natriuretic peptide levels 15.3979400087 CLCN6 FUNCTIONAL_SNP rs3818762 chr1 11851003 Intron 4 48030 CEU:1.0;0.908, CHB:1.0;1.0, JPT:1.0;0.857 FUNCTIONAL_SNP rs1476413 chr1 11852300 Intron 4 46733 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;0.797 LEAD_SNP rs2901964 chr1 15792426 Exon,non-coding 4 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.30102999566 CELA2A LEAD_SNP rs10927875 chr1 16299312 Intron 7 ASSOCIATION 21459883 Dilated cardiomyopathy 9.0 ZBTB17 FUNCTIONAL_SNP rs4661674 chr1 16296039 Intron 5a 3273 CEU:0.955;0.912, CHB:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs4307563 chr1 16313788 Intergenic 5a 14476 CEU:1.0;0.954 FUNCTIONAL_SNP rs12135073 chr1 16167799 Intron 7 131513 CEU:1.0;0.831 FUNCTIONAL_SNP rs3979179 chr1 16306846 Intergenic 7 7534 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3961710 chr1 16313172 Intergenic 7 13860 CEU:1.0;0.867 LEAD_SNP rs9442235 chr1 16393357 Intron 5b ASSOCIATION 19734545 Cognitive performance 5.22184874962 FAM131C LEAD_SNP rs2284746 chr1 17306675 Intron 4 ASSOCIATION 20881960 Height 28.3979400087 MFAP2 FUNCTIONAL_SNP rs9435734 chr1 17311190 Intron 4 4515 CEU:1.0;1.0, CHB:0.944;0.844, JPT:0.924;0.745, YRI:1.0;1.0 FUNCTIONAL_SNP rs6657613 chr1 17328200 Intron 5b 21525 CEU:1.0;0.856, CHB:0.891;0.754, JPT:0.859;0.651, YRI:0.8;0.64 FUNCTIONAL_SNP rs926702 chr1 17336521 Intron 5b 29846 CEU:0.956;0.809, CHB:0.889;0.791, JPT:0.842;0.58, YRI:0.78;0.608 LEAD_SNP rs3738814 chr1 17331676 Intron 2b ASSOCIATION 20189936 Height 6.69897000434 ATP13A2 LEAD_SNP rs2240335 chr1 17674537 Coding 4 ASSOCIATION 21505073 Rheumatoid arthritis 7.69897000434 PADI4 ASSOCIATION 21452313 Rheumatoid arthritis 7.69897000434 PADI4 FUNCTIONAL_SNP rs2240339 chr1 17674108 Intron 3a 429 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 LEAD_SNP rs7538876 chr1 17722363 Intron 5b ASSOCIATION 18849993 Basal cell carcinoma (cutaneous) 11.3979400087 PADI6 FUNCTIONAL_SNP rs942457 chr1 17739586 Coding 7 17223 CEU:1.0;0.92, CHB:1.0;0.931, JPT:0.901;0.812, YRI:1.0;0.886 FUNCTIONAL_SNP rs4920603 chr1 17727379 Intron 4 5016 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;0.96 FUNCTIONAL_SNP rs6678552 chr1 17720391 Intron 5b 1972 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12124893 chr1 17717162 Intron 7 5201 CEU:1.0;1.0, CHB:1.0;0.931, JPT:0.901;0.813, YRI:1.0;0.843 FUNCTIONAL_SNP rs6695531 chr1 17720088 Intron 7 2275 CEU:1.0;0.904, CHB:1.0;0.93, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs16861326 chr1 18294487 Intergenic 6 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.69897000434 ACTL8 - IGSF21 LEAD_SNP rs3007729 chr1 18795255 Intergenic 4 ASSOCIATION 21441570 Diabetic retinopathy 5.30102999566 IGSF21 - KLHDC7A LEAD_SNP rs12063142 chr1 19139517 Intergenic 7 ASSOCIATION 20070850 Parkinson's disease 6.30102999566 PAX7 - TAS1R2 LEAD_SNP rs710865 chr1 19568972 Intron 7 ASSOCIATION 20171287 Brain structure 7.0 KIAA0090 FUNCTIONAL_SNP rs709683 chr1 19565344 Coding 5a 3628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.873 LEAD_SNP rs12045440 chr1 19765518 Intron 5b ASSOCIATION 21565293 Thyroid volume 10.6989700043 CAPZB - C1orf151 ASSOCIATION 21565293 Thyroid volume 13.5228787453 CAPZB - C1orf151 FUNCTIONAL_SNP rs12026907 chr1 19738518 Intron 3a 27000 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1566531 chr1 19727896 Intron 4 37622 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12033437 chr1 19749894 Intron 4 15624 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12088915 chr1 19708363 Intron 5a 57155 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10458381 chr1 19769243 Intron 5b 3725 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10753558 chr1 19697915 Intron 5b 67603 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10753559 chr1 19698026 Intron 5b 67492 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3790767 chr1 19698546 Intron 5b 66972 CEU:1.0;0.811, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7667 chr1 19718824 Intron 5b 46694 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4911994 chr1 19761593 Intron 5b 3925 CEU:1.0;0.829, JPT:1.0;0.559 FUNCTIONAL_SNP rs10917434 chr1 19707302 Intron 6 58216 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12030205 chr1 19740174 Intron 6 25344 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12042240 chr1 19768571 Intron 7 3053 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6662273 chr1 19740823 Intron 7 24695 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12091047 chr1 19771925 Intron 7 6407 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.933;0.871 LEAD_SNP rs12138950 chr1 19839115 Intergenic 2b ASSOCIATION 21565293 Thyroid volume 17.5228787453 CAPZB - C1orf151 FUNCTIONAL_SNP rs11806434 chr1 19832437 Intergenic 2b 6678 CEU:1.0;0.826, CHB:1.0;0.768, JPT:1.0;1.0, YRI:0.895;0.572 FUNCTIONAL_SNP rs10799824 chr1 19841174 Intergenic 2b 2059 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.64, YRI:1.0;1.0 FUNCTIONAL_SNP rs10917469 chr1 19843576 Intergenic 5b 4461 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.64, YRI:1.0;1.0 FUNCTIONAL_SNP rs12136721 chr1 19832987 Intergenic 6 6128 CEU:1.0;0.809, CHB:1.0;0.809, JPT:1.0;0.806, YRI:0.872;0.557 FUNCTIONAL_SNP rs4600067 chr1 19823950 Intergenic 7 15165 CEU:1.0;0.879, CHB:1.0;0.834, JPT:1.0;1.0, YRI:0.846;0.597 FUNCTIONAL_SNP rs873095 chr1 19823329 Intergenic 7 15786 CEU:1.0;0.879, CHB:1.0;0.834, JPT:1.0;1.0, YRI:0.855;0.614 FUNCTIONAL_SNP rs16822442 chr1 19827970 Intergenic 7 11145 CEU:1.0;0.879, CHB:1.0;0.834, JPT:1.0;1.0, YRI:1.0;0.828 FUNCTIONAL_SNP rs4394682 chr1 19837537 Intergenic 7 1578 CEU:1.0;0.827, CHB:1.0;0.768, JPT:1.0;1.0, YRI:1.0;0.841 LEAD_SNP rs10917468 chr1 19843354 Intergenic 7 ASSOCIATION 21565293 Thyroid volume 14.0 CAPZB - C1orf151 FUNCTIONAL_SNP rs9783019 chr1 19849656 Intergenic 6 6302 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10799821 chr1 19837969 Intergenic 6 5385 CEU:1.0;0.949, CHB:1.0;0.946, JPT:1.0;0.759, YRI:1.0;1.0 FUNCTIONAL_SNP rs10799822 chr1 19839821 Intergenic 7 3533 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4362008 chr1 19837558 Intergenic 7 5796 CEU:1.0;0.95, CHB:1.0;0.947, JPT:1.0;0.759, YRI:1.0;1.0 LEAD_SNP rs1317209 chr1 20140036 Intergenic 5b ASSOCIATION 20228799 Ulcerative colitis 9.69897000434 RNF186 LEAD_SNP rs3806308 chr1 20142866 Intron 2b ASSOCIATION 19122664 Ulcerative colitis 8.15490195999 RNF186 FUNCTIONAL_SNP rs3806310 chr1 20142681 Intron 4 185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12128452 chr1 20143706 Intron 5b 840 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs10917547 chr1 20143142 Intron 5b 276 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10917548 chr1 20143548 Intron 5b 682 CEU:0.958;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 LEAD_SNP rs6426833 chr1 20171860 Intergenic 4 ASSOCIATION 21297633 Ulcerative colitis 34.3979400087 RNF186 - OTUD3 ASSOCIATION 20228799 Ulcerative colitis 20.6989700043 RNF186 - OTUD3 ASSOCIATION 19915572 Ulcerative colitis 10.6989700043 RNF186 - OTUD3 ASSOCIATION 19122664 Ulcerative colitis 12.3010299957 RNF186 - OTUD3 FUNCTIONAL_SNP rs4654925 chr1 20227723 Intron 6 55863 CEU:0.959;0.885, CHB:0.821;0.637, JPT:1.0;0.85 FUNCTIONAL_SNP rs10737481 chr1 20171514 Intergenic 7 346 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 LEAD_SNP rs4654925 chr1 20227723 Intron 6 ASSOCIATION 20228798 Ulcerative colitis 21.0457574906 OTUD3 FUNCTIONAL_SNP rs6426833 chr1 20171860 Intergenic 4 55863 CEU:0.959;0.885, CHB:0.821;0.637, JPT:1.0;0.85 FUNCTIONAL_SNP rs10737481 chr1 20171514 Intergenic 7 56209 CEU:0.962;0.891, CHB:0.832;0.657, JPT:1.0;0.851 LEAD_SNP rs4654748 chr1 21786068 Intron 6 ASSOCIATION 19303062 Folate pathway vitamin levels 17.096910013 NBPF3 LEAD_SNP rs1780324 chr1 21821757 Intergenic 5b ASSOCIATION 18940312 Plasma levels of liver enzymes 14.15490196 NBPF3 - ALPL FUNCTIONAL_SNP rs10799701 chr1 21820990 Intergenic 5b 767 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;0.632 FUNCTIONAL_SNP rs10799702 chr1 21821880 Intergenic 5b 123 CEU:1.0;0.821, JPT:1.0;0.847 LEAD_SNP rs1697421 chr1 21823292 Intergenic 6 ASSOCIATION 20558539 Serum phosphorus levels 27.0 NBPF3 - ALPL LEAD_SNP rs16826658 chr1 22485871 Intergenic 5b ASSOCIATION 20601957 Endometriosis 5.69897000434 WNT4 - ZBTB40 LEAD_SNP rs7521902 chr1 22490724 Intergenic 5b ASSOCIATION 20852632 Ovarian cancer 5.30102999566 WNT4 - ZBTB40 FUNCTIONAL_SNP rs3920498 chr1 22492887 Intergenic 5b 2163 CEU:1.0;1.0, CHB:0.889;0.656, JPT:1.0;0.823 LEAD_SNP rs7524102 chr1 22698447 Intergenic 5b ASSOCIATION 21533022 Bone mineral density 6.04575749056 WNT4 - ZBTB40 ASSOCIATION 21533022 Bone mineral density 6.0 WNT4 - ZBTB40 ASSOCIATION 21297633 Ulcerative colitis 12.6989700043 WNT4 - ZBTB40 ASSOCIATION 19915572 Ulcerative colitis 6.52287874528 WNT4 - ZBTB40 ASSOCIATION 19801982 Bone mineral density (spine) 9.52287874528 WNT4 - ZBTB40 ASSOCIATION 19079262 Bone mineral density (hip) 16.0 WNT4 - ZBTB40 ASSOCIATION 18445777 Bone mineral density (hip) 15.3010299957 WNT4 - ZBTB40 ASSOCIATION 18445777 Bone mineral density (spine) 8.04575749056 WNT4 - ZBTB40 FUNCTIONAL_SNP rs6684375 chr1 22706434 Intergenic 2b 7987 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs7537281 chr1 22692078 Intergenic 5b 6369 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;0.829 FUNCTIONAL_SNP rs12568930 chr1 22702231 Intergenic 5b 3784 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs6426749 chr1 22711473 Intergenic 6 13026 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.819 FUNCTIONAL_SNP rs10493013 chr1 22703035 Intergenic 7 4588 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.962 LEAD_SNP rs6696981 chr1 22702858 Intergenic 7 ASSOCIATION 19079262 Bone mineral density (spine) 7.69897000434 WNT4 - ZBTB40 FUNCTIONAL_SNP rs12723796 chr1 22691606 Intergenic 4 11252 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;0.96 FUNCTIONAL_SNP rs12561997 chr1 22702280 Intergenic 5b 578 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs11803476 chr1 22703325 Intergenic 5b 467 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.932, YRI:1.0;1.0 FUNCTIONAL_SNP rs6684479 chr1 22706534 Intergenic 5b 3676 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7550872 chr1 22711378 Intergenic 6 8520 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;1.0 FUNCTIONAL_SNP rs6426748 chr1 22707565 Intergenic 6 4707 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6426749 chr1 22711473 Intergenic 6 ASSOCIATION 19801982 Bone mineral density (hip) 7.04575749056 WNT4 - ZBTB40 FUNCTIONAL_SNP rs6684375 chr1 22706434 Intergenic 2b 5039 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;0.947, YRI:1.0;0.83 FUNCTIONAL_SNP rs7537281 chr1 22692078 Intergenic 5b 19395 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;0.799 FUNCTIONAL_SNP rs12568930 chr1 22702231 Intergenic 5b 9242 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.788 FUNCTIONAL_SNP rs7524102 chr1 22698447 Intergenic 5b 13026 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.819 FUNCTIONAL_SNP rs10493013 chr1 22703035 Intergenic 7 8438 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.946;0.895, YRI:1.0;0.83 LEAD_SNP rs4649203 chr1 24519920 Intergenic 5b ASSOCIATION 20953190 Psoriasis 7.15490195999 IL28RA - GRHL3 FUNCTIONAL_SNP rs10794648 chr1 24518206 Intergenic 4 1714 CEU:1.0;0.879, CHB:0.951;0.905, JPT:1.0;1.0 LEAD_SNP rs11249215 chr1 25297184 Intergenic 4 ASSOCIATION 21743469 Ankylosing spondylitis 10.0457574906 RUNX3 - SYF2 FUNCTIONAL_SNP rs1609996 chr1 25301869 Intergenic 3a 4685 CEU:1.0;0.888, JPT:0.937;0.625 FUNCTIONAL_SNP rs4265380 chr1 25293356 Intergenic 4 3828 CEU:1.0;0.924, JPT:1.0;0.665, YRI:1.0;1.0 FUNCTIONAL_SNP rs7529070 chr1 25295580 Intergenic 4 1604 CEU:1.0;0.888, JPT:1.0;0.643 FUNCTIONAL_SNP rs2135755 chr1 25302495 Intergenic 5a 5311 CEU:1.0;0.885, JPT:0.936;0.648 FUNCTIONAL_SNP rs10751776 chr1 25296743 Intergenic 5b 441 CEU:1.0;0.801, JPT:1.0;0.592 FUNCTIONAL_SNP rs7555518 chr1 25299404 Intergenic 5b 2220 CEU:1.0;0.921, JPT:0.93;0.601 FUNCTIONAL_SNP rs7513156 chr1 25299836 Intergenic 5b 2652 CEU:1.0;0.888, JPT:0.937;0.625 FUNCTIONAL_SNP rs10903121 chr1 25300042 Intergenic 5b 2858 CEU:1.0;0.888, JPT:0.937;0.625 FUNCTIONAL_SNP rs12036815 chr1 25300632 Intergenic 5b 3448 CEU:1.0;0.888, JPT:0.937;0.625 FUNCTIONAL_SNP rs4648890 chr1 25293941 Intergenic 5b 3243 CEU:1.0;0.924, JPT:1.0;0.643 FUNCTIONAL_SNP rs4649040 chr1 25293902 Intergenic 5b 3282 CEU:1.0;0.923, JPT:1.0;0.643, YRI:1.0;0.834 FUNCTIONAL_SNP rs7542123 chr1 25299816 Intergenic 5b 2632 CEU:1.0;0.888, JPT:0.937;0.625 FUNCTIONAL_SNP rs7523328 chr1 25294195 Intergenic 6 2989 CEU:1.0;0.917, YRI:1.0;0.868 FUNCTIONAL_SNP rs2063112 chr1 25303905 Intergenic 6 6721 CEU:1.0;0.885, JPT:0.937;0.625 FUNCTIONAL_SNP rs7523412 chr1 25294264 Intergenic 6 2920 CEU:1.0;0.921, JPT:1.0;0.668, YRI:1.0;1.0 FUNCTIONAL_SNP rs10794667 chr1 25304552 Intergenic 7 7368 CEU:1.0;0.888, JPT:0.937;0.625 FUNCTIONAL_SNP rs7550635 chr1 25299637 Intergenic 7 2453 CEU:1.0;0.888, JPT:0.937;0.625 FUNCTIONAL_SNP rs10903118 chr1 25294878 Intergenic 7 2306 CEU:1.0;0.921, JPT:1.0;0.643, YRI:1.0;0.884 FUNCTIONAL_SNP rs10903119 chr1 25294902 Intergenic 7 2282 CEU:1.0;0.958, JPT:1.0;0.66, YRI:1.0;0.834 FUNCTIONAL_SNP rs10903122 chr1 25303576 Intergenic 7 6392 CEU:1.0;0.888, JPT:0.937;0.625 FUNCTIONAL_SNP rs7536848 chr1 25294345 Intergenic 7 2839 CEU:1.0;0.923, JPT:1.0;0.643, YRI:1.0;0.884 LEAD_SNP rs10903122 chr1 25303576 Intergenic 7 ASSOCIATION 20190752 Celiac disease 9.69897000434 RUNX3 - SYF2 FUNCTIONAL_SNP rs6672420 chr1 25291010 Coding 4 12566 CEU:1.0;0.854, CHB:1.0;0.943, JPT:1.0;0.859 FUNCTIONAL_SNP rs1609996 chr1 25301869 Intergenic 3a 1707 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4265380 chr1 25293356 Intergenic 4 10220 CEU:1.0;0.961, CHB:1.0;0.941, JPT:1.0;0.949 FUNCTIONAL_SNP rs11249215 chr1 25297184 Intergenic 4 6392 CEU:1.0;0.888, JPT:0.937;0.625 FUNCTIONAL_SNP rs7529070 chr1 25295580 Intergenic 4 7996 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.904 FUNCTIONAL_SNP rs11249222 chr1 25305783 Intergenic 5a 2207 CEU:1.0;0.875, CHB:1.0;1.0, JPT:1.0;0.947, YRI:0.96;0.921 FUNCTIONAL_SNP rs2135755 chr1 25302495 Intergenic 5a 1081 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs10751776 chr1 25296743 Intergenic 5b 6833 CEU:1.0;0.914, CHB:0.934;0.819, JPT:1.0;0.896 FUNCTIONAL_SNP rs4648890 chr1 25293941 Intergenic 5b 9635 CEU:1.0;0.961, CHB:1.0;0.943, JPT:1.0;0.904 FUNCTIONAL_SNP rs7555518 chr1 25299404 Intergenic 5b 4172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7513156 chr1 25299836 Intergenic 5b 3740 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4649040 chr1 25293902 Intergenic 5b 9674 CEU:1.0;0.96, CHB:1.0;0.943, JPT:1.0;0.904 FUNCTIONAL_SNP rs10903121 chr1 25300042 Intergenic 5b 3534 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12036815 chr1 25300632 Intergenic 5b 2944 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7542123 chr1 25299816 Intergenic 5b 3760 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7523328 chr1 25294195 Intergenic 6 9381 CEU:1.0;0.957 FUNCTIONAL_SNP rs2063112 chr1 25303905 Intergenic 6 329 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.952;0.681 FUNCTIONAL_SNP rs7523412 chr1 25294264 Intergenic 6 9312 CEU:1.0;0.96, CHB:1.0;0.939, JPT:1.0;0.942 FUNCTIONAL_SNP rs10794667 chr1 25304552 Intergenic 7 976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7550635 chr1 25299637 Intergenic 7 3939 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10903118 chr1 25294878 Intergenic 7 8698 CEU:1.0;0.96, CHB:1.0;0.943, JPT:1.0;0.904 FUNCTIONAL_SNP rs10903119 chr1 25294902 Intergenic 7 8674 CEU:1.0;0.958, CHB:1.0;0.939, JPT:1.0;0.948 FUNCTIONAL_SNP rs7536848 chr1 25294345 Intergenic 7 9231 CEU:1.0;0.96, CHB:1.0;0.943, JPT:1.0;0.904 LEAD_SNP rs1043879 chr1 25570081 Coding 5b ASSOCIATION 21700265 Erythrocyte sedimentation rate 8.69897000434 C1orf63 LEAD_SNP rs3091242 chr1 25674785 Intron 6 ASSOCIATION 21700265 Erythrocyte sedimentation rate 12.6989700043 TMEM50A FUNCTIONAL_SNP rs9689 chr1 25688276 Exon,non-coding 6 13491 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1053438 chr1 25687901 Exon,non-coding 4 13116 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10903129 chr1 25768937 Intron 4 94152 CEU:0.96;0.886, CHB:1.0;0.898, JPT:1.0;0.829 FUNCTIONAL_SNP rs873308 chr1 25758655 Intron 4 83870 CEU:1.0;0.962, CHB:1.0;0.898, JPT:1.0;0.829 FUNCTIONAL_SNP rs686631 chr1 25719599 Intron 5b 44814 CEU:1.0;0.961, CHB:1.0;0.898, JPT:1.0;0.829 FUNCTIONAL_SNP rs666686 chr1 25719511 Intron 5b 44726 CEU:1.0;0.961, CHB:1.0;0.898, JPT:1.0;0.829 FUNCTIONAL_SNP rs631133 chr1 25724146 Intron 5b 49361 CEU:1.0;0.962, CHB:1.0;0.948, JPT:1.0;0.941 FUNCTIONAL_SNP rs932372 chr1 25755014 Intron 6 80229 CEU:0.96;0.921, CHB:1.0;0.898, JPT:1.0;0.829 FUNCTIONAL_SNP rs11802413 chr1 25760920 Intron 6 86135 CEU:0.96;0.886, CHB:1.0;0.898, JPT:1.0;0.829 FUNCTIONAL_SNP rs11249248 chr1 25753051 Intron 6 78266 CEU:0.961;0.923, CHB:1.0;0.898, JPT:1.0;0.829 FUNCTIONAL_SNP rs926438 chr1 25753638 Intron 6 78853 CEU:0.961;0.923, CHB:1.0;0.898, JPT:1.0;0.829 FUNCTIONAL_SNP rs7541095 chr1 25761291 Intron 6 86506 CEU:0.96;0.886, CHB:1.0;0.898, JPT:1.0;0.829 FUNCTIONAL_SNP rs4649084 chr1 25752617 Intron 6 77832 CEU:0.961;0.923, CHB:1.0;0.898, JPT:1.0;0.829 FUNCTIONAL_SNP rs12027135 chr1 25775733 Intron 6 100948 CEU:0.96;0.886, CHB:1.0;0.898, JPT:1.0;0.829 LEAD_SNP rs10903129 chr1 25768937 Intron 4 ASSOCIATION 21700265 Erythrocyte sedimentation rate 12.3010299957 TMEM57 ASSOCIATION 19060911 Cholesterol, total 9.30102999566 TMEM57 FUNCTIONAL_SNP rs9689 chr1 25688276 Exon,non-coding 6 80661 CEU:0.96;0.886, CHB:1.0;0.897, JPT:1.0;0.829 FUNCTIONAL_SNP rs1053438 chr1 25687901 Exon,non-coding 4 81036 CEU:0.961;0.923, CHB:1.0;0.901, JPT:1.0;0.829 FUNCTIONAL_SNP rs873308 chr1 25758655 Intron 4 10282 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs686631 chr1 25719599 Intron 5b 49338 CEU:0.96;0.921, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs666686 chr1 25719511 Intron 5b 49426 CEU:0.96;0.921, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs631133 chr1 25724146 Intron 5b 44791 CEU:0.961;0.923, CHB:1.0;0.949, JPT:1.0;0.881 FUNCTIONAL_SNP rs932372 chr1 25755014 Intron 6 13923 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3091242 chr1 25674785 Intron 6 94152 CEU:0.96;0.886, CHB:1.0;0.898, JPT:1.0;0.829 FUNCTIONAL_SNP rs11802413 chr1 25760920 Intron 6 8017 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11249248 chr1 25753051 Intron 6 15886 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs926438 chr1 25753638 Intron 6 15299 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7541095 chr1 25761291 Intron 6 7646 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.583 FUNCTIONAL_SNP rs4649084 chr1 25752617 Intron 6 16320 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12027135 chr1 25775733 Intron 6 6796 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs11809207 chr1 26521140 Intron 7 ASSOCIATION 19343178 Height 7.22184874962 CATSPER4 LEAD_SNP rs4949526 chr1 30432219 Intergenic 5a ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.39794000867 PTPRU - MATN1 FUNCTIONAL_SNP rs4949524 chr1 30422702 Intergenic 2a 9517 CEU:0.954;0.835, CHB:0.932;0.689, JPT:1.0;0.588 FUNCTIONAL_SNP rs10914662 chr1 30417143 Intergenic 4 15076 CEU:0.95;0.902, CHB:0.794;0.557, JPT:0.906;0.579 FUNCTIONAL_SNP rs11583665 chr1 30419456 Intergenic 5b 12763 CEU:0.954;0.835, CHB:0.804;0.574, JPT:0.908;0.581 FUNCTIONAL_SNP rs267698 chr1 30433405 Intergenic 5b 1186 CEU:1.0;1.0, CHB:1.0;0.77, JPT:0.816;0.613 FUNCTIONAL_SNP rs1498239 chr1 30413139 Intergenic 5b 19080 CEU:0.953;0.831, CHB:0.743;0.52, JPT:0.908;0.581 FUNCTIONAL_SNP rs4245639 chr1 30414051 Intergenic 6 18168 CEU:0.954;0.833, CHB:0.8;0.537, JPT:0.908;0.581 FUNCTIONAL_SNP rs267700 chr1 30430366 Intergenic 7 1853 CEU:1.0;1.0, CHB:1.0;0.77, JPT:1.0;0.708 FUNCTIONAL_SNP rs1009080 chr1 30431560 Intergenic 7 659 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs10798927 chr1 30413903 Intergenic 7 18316 CEU:0.954;0.835, CHB:0.804;0.574, JPT:0.908;0.581 FUNCTIONAL_SNP rs1498238 chr1 30412503 Intergenic 7 19716 CEU:0.954;0.835, CHB:0.932;0.689, JPT:1.0;0.588 LEAD_SNP rs910696 chr1 30567596 Intergenic 5b ASSOCIATION 19247474 Smoking behavior 5.52287874528 PTPRU - MATN1 FUNCTIONAL_SNP rs6691680 chr1 30576228 Intergenic 7 8632 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 LEAD_SNP rs2180233 chr1 30627712 Intergenic 6 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.04575749056 PTPRU - MATN1 LEAD_SNP rs476463 chr1 34248064 Intron 7 ASSOCIATION 20171287 Brain structure 6.0 CSMD2 LEAD_SNP rs2281597 chr1 34359858 Intron 7 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 6.30102999566 CSMD2 LEAD_SNP rs673604 chr1 35687815 Intergenic 6 ASSOCIATION 21499250 Endometrial cancer 5.22184874962 SFPQ - ZMYM4 FUNCTIONAL_SNP rs11264110 chr1 35636227 Intergenic 5b 51588 CEU:1.0;0.838, CHB:1.0;0.906, JPT:0.927;0.588 FUNCTIONAL_SNP rs668092 chr1 35687203 Intergenic 7 612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.962 LEAD_SNP rs6702784 chr1 36904720 Intron 7 ASSOCIATION 21441570 Diabetic retinopathy 5.39794000867 OSCP1 FUNCTIONAL_SNP rs7170 chr1 36859163 Exon,non-coding 7 45557 CEU:1.0;1.0 FUNCTIONAL_SNP rs883695 chr1 36920727 Intergenic 7 16007 CEU:1.0;1.0 LEAD_SNP rs9253 chr1 37958813 Exon,non-coding 7 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.39794000867 MEAF6 FUNCTIONAL_SNP rs12133933 chr1 37958389 Exon,non-coding 6 424 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2294873 chr1 37961613 Intron 4 2800 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12117544 chr1 38247153 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 5.09691001301 EPHA10 - MANEAL LEAD_SNP rs12131057 chr1 38624129 Intergenic 7 ASSOCIATION 20453842 Rheumatoid arthritis 6.39794000867 POU3F1 - RRAGC FUNCTIONAL_SNP rs7544568 chr1 38639208 Intergenic 2b 15079 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs883220 chr1 38616871 Intergenic 5b 7258 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.698 FUNCTIONAL_SNP rs7540342 chr1 38622268 Intergenic 6 1861 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.714 FUNCTIONAL_SNP rs2045793 chr1 38635462 Intergenic 7 11333 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.734 FUNCTIONAL_SNP rs2085993 chr1 38614867 Intergenic 7 9262 CEU:1.0;0.939, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7553012 chr1 38644861 Intergenic 7 20732 CEU:1.0;1.0, CHB:1.0;1.0, YRI:0.827;0.544 LEAD_SNP rs12037222 chr1 40064961 Intergenic 2b ASSOCIATION 21300955 C-reactive protein 10.2218487496 SNORA55 - HEYL FUNCTIONAL_SNP rs2293476 chr1 40036847 Exon,non-coding 4 28114 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.778 FUNCTIONAL_SNP rs4660293 chr1 40028180 Intron 4 36781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.698 FUNCTIONAL_SNP rs17513135 chr1 40035686 Intron 6 29275 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.778 FUNCTIONAL_SNP rs4660808 chr1 40018509 Intergenic 6 46452 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.698 FUNCTIONAL_SNP rs17264866 chr1 40022777 Intergenic 7 42184 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.698 LEAD_SNP rs873917 chr1 40132795 Intron 4 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 5.09691001301 NT5C1A LEAD_SNP rs4660456 chr1 41239511 Intergenic 4 ASSOCIATION 21507922 Platelet counts 5.39794000867 NFYC - KCNQ4 FUNCTIONAL_SNP rs6702983 chr1 41201257 Exon,non-coding 5a 38254 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs12727412 chr1 41188915 Exon,non-coding 5b 50596 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs12566733 chr1 41201739 Intron 2b 37772 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7542019 chr1 41169711 Intron 4 69800 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs656230 chr1 41158373 Intron 4 81138 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs16827532 chr1 41220736 Intron 5a 18775 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs12729696 chr1 41220771 Intron 5a 18740 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs12566786 chr1 41208381 Intron 5b 31130 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs2361651 chr1 41230214 Intron 5b 9297 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs4660449 chr1 41205452 Intron 5b 34059 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs569159 chr1 41167534 Intron 5b 71977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs552147 chr1 41154813 Intergenic 5b 84698 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.867 FUNCTIONAL_SNP rs4660457 chr1 41239793 Intergenic 5b 282 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.88 FUNCTIONAL_SNP rs7551747 chr1 41165079 Intron 5b 74432 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2223486 chr1 41159229 Intron 5b 80282 CEU:1.0;0.943, CHB:1.0;1.0, JPT:0.952;0.906, YRI:1.0;0.88 FUNCTIONAL_SNP rs954654 chr1 41230651 Intron 6 8860 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs671704 chr1 41149646 Intron 6 89865 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.867 FUNCTIONAL_SNP rs3767951 chr1 41233031 Intron 6 6480 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7532802 chr1 41191200 Intron 7 48311 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs6668453 chr1 41198971 Intron 7 40540 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs617413 chr1 41135518 Intron 7 103993 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.867 FUNCTIONAL_SNP rs12728776 chr1 41217390 Intron 7 22121 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.88 FUNCTIONAL_SNP rs4660173 chr1 41213548 Intron 7 25963 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs1494 chr1 41171848 Intron 7 67663 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs3767952 chr1 41231032 Intron 7 8479 CEU:0.94;0.883, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs4660452 chr1 41214191 Intron 7 25320 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs6664044 chr1 41200761 Intron 7 38750 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs12567755 chr1 41217485 Intron 7 22026 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs6686842 chr1 41530871 Intron 6 ASSOCIATION 18391952 Height 7.69897000434 SCMH1 FUNCTIONAL_SNP rs11209342 chr1 41469666 Intron 2a 61205 CEU:1.0;0.96, CHB:0.951;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs213734 chr1 41575699 Intron 2b 44828 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10889792 chr1 41490885 Intergenic 4 39986 CEU:1.0;0.96, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6663565 chr1 41563688 Intron 6 32817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6600365 chr1 41556253 Intron 6 25382 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs479493 chr1 41567202 Intron 7 36331 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs656917 chr1 41569708 Intron 7 38837 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12735455 chr1 41466550 Intron 7 64321 CEU:1.0;0.958, CHB:0.949;0.857, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2802551 chr1 41497443 Intron 7 33428 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12718433 chr1 41466803 Intron 7 64068 CEU:1.0;0.96, CHB:0.949;0.857, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1008505 chr1 41560235 Intron 7 29364 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs16830359 chr1 43596384 Intergenic 7 ASSOCIATION 21348951 Cardiac hypertrophy 7.0 SLC2A1 - FAM183A LEAD_SNP rs621559 chr1 43645411 Intron 7 ASSOCIATION 21460395 Telomere length 5.69897000434 WDR65 LEAD_SNP rs17391905 chr1 51546140 Intergenic 7 ASSOCIATION 21076409 Ventricular conduction 9.52287874528 CDKN2C - C1orf185 LEAD_SNP rs6695567 chr1 53629585 Intergenic 6 ASSOCIATION 21408207 Systemic lupus erythematosus 5.39794000867 SLC1A7 - CPT2 FUNCTIONAL_SNP rs1628297 chr1 53614880 Intergenic 7 14705 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs6672178 chr1 53629849 Intergenic 7 264 CEU:0.956;0.914, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6588467 chr1 53630304 Intergenic 7 719 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.909 FUNCTIONAL_SNP rs1679941 chr1 53614976 Intergenic 7 14609 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.909 LEAD_SNP rs6588480 chr1 53978119 Intron 2b ASSOCIATION 20339536 Response to statin therapy 5.09691001301 GLIS1 LEAD_SNP rs11206510 chr1 55496039 Intergenic 7 ASSOCIATION 21378990 Coronary heart disease 7.04575749056 BSND - PCSK9 ASSOCIATION 20864672 LDL cholesterol 10.0 BSND - PCSK9 ASSOCIATION 19198609 Myocardial infarction (early onset) 8.0 BSND - PCSK9 ASSOCIATION 19060906 LDL cholesterol 7.39794000867 BSND - PCSK9 ASSOCIATION 18193043 LDL cholesterol 10.3979400087 BSND - PCSK9 LEAD_SNP rs11591147 chr1 55505647 Coding 5b ASSOCIATION 18193044 LDL cholesterol 43.6989700043 PCSK9 LEAD_SNP rs12239436 chr1 55742837 Intergenic 4 ASSOCIATION 21347282 Coronary heart disease 5.30102999566 USP24 - GOT2P1 LEAD_SNP rs11206801 chr1 56850686 Intergenic 7 ASSOCIATION 20932310 AB1-42 7.22184874962 RPSAP20 - PPAP2B FUNCTIONAL_SNP rs6690394 chr1 56854038 Intergenic 7 3352 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 LEAD_SNP rs17114036 chr1 56962821 Intron 4 ASSOCIATION 21378990 Coronary heart disease 18.3979400087 PPAP2B LEAD_SNP rs17114046 chr1 56966350 Intron 7 ASSOCIATION 21378988 Coronary heart disease 6.69897000434 PPAP2B FUNCTIONAL_SNP rs4634932 chr1 56996191 Intron 5b 29841 CEU:1.0;0.824, CHB:1.0;1.0 FUNCTIONAL_SNP rs9970807 chr1 56965664 Intron 6 686 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.655 FUNCTIONAL_SNP rs2404715 chr1 57008778 Intron 6 42428 CEU:1.0;0.89, CHB:1.0;1.0 LEAD_SNP rs10159302 chr1 57805550 Intron 7 ASSOCIATION 20041166 HIV-1 control 5.04575749056 DAB1 FUNCTIONAL_SNP rs17115757 chr1 57870800 Intron 5b 65250 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.913;0.582 FUNCTIONAL_SNP rs11800574 chr1 57814771 Intron 5b 9221 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.902;0.583 FUNCTIONAL_SNP rs1424472 chr1 57801031 Intron 6 4519 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6657926 chr1 57801950 Intron 7 3600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1424471 chr1 57801287 Intron 7 4263 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs527409 chr1 58757915 Intron 5b ASSOCIATION 21221998 Kawasaki disease 6.0 VKORC1P2 - OMA1 FUNCTIONAL_SNP rs4912320 chr1 58764332 Intron 6 6417 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs639534 chr1 58741638 Intron 7 16277 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6681454 chr1 58734638 Intron 7 23277 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2811893 chr1 59162148 Intron 7 ASSOCIATION 21310492 Diabetic retinopathy 6.52287874528 MYSM1 FUNCTIONAL_SNP rs12139511 chr1 59147926 Coding 7 14222 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909, YRI:1.0;1.0 FUNCTIONAL_SNP rs2746081 chr1 59158161 Intron 5b 3987 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2064374 chr1 59160885 Intron 6 1263 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6677560 chr1 59162793 Intron 7 645 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4601609 chr1 59325626 Intron 7 ASSOCIATION 19734545 Cognitive performance 5.30102999566 JUN - FGGY LEAD_SNP rs17119280 chr1 59799161 Intron 6 ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 5.15490195999 FGGY LEAD_SNP rs12727131 chr1 60084516 Intron 6 ASSOCIATION 21507922 Neutrophil count 5.52287874528 FGGY LEAD_SNP rs2989476 chr1 61059259 Intron 7 ASSOCIATION 21738484 Bipolar disorder 5.52287874528 C1orf87 - NFIA FUNCTIONAL_SNP rs2363079 chr1 61053722 Exon,non-coding 5b 5537 CEU:1.0;0.874, CHB:1.0;0.785, JPT:1.0;0.787 FUNCTIONAL_SNP rs7522761 chr1 61014021 Intron 3b 45238 CEU:1.0;0.835, JPT:0.888;0.651 FUNCTIONAL_SNP rs484743 chr1 61062474 Intron 4 3215 CEU:1.0;0.92, CHB:1.0;0.772, JPT:1.0;0.822 FUNCTIONAL_SNP rs2989477 chr1 61082925 Intron 5a 23666 CEU:1.0;0.815, JPT:0.829;0.567 FUNCTIONAL_SNP rs11207633 chr1 61007182 Intron 6 52077 CEU:1.0;0.805, JPT:0.888;0.651 FUNCTIONAL_SNP rs898729 chr1 61066603 Intron 6 7344 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs10218679 chr1 61063647 Intron 6 4388 CEU:1.0;0.92, CHB:1.0;0.772, JPT:1.0;0.822 FUNCTIONAL_SNP rs1461359 chr1 61044919 Intron 6 14340 CEU:1.0;0.88, CHB:0.948;0.855, JPT:0.944;0.736 FUNCTIONAL_SNP rs4259696 chr1 61018307 Intron 6 40952 CEU:1.0;0.805, JPT:0.885;0.644 FUNCTIONAL_SNP rs1572358 chr1 61056625 Intron 7 2634 CEU:1.0;0.842, CHB:1.0;0.749, JPT:1.0;0.787 FUNCTIONAL_SNP rs1841565 chr1 61079792 Intron 7 20533 CEU:1.0;0.815, JPT:0.829;0.567 FUNCTIONAL_SNP rs1381168 chr1 61052793 Intron 7 6466 CEU:1.0;0.842, CHB:1.0;0.785, JPT:1.0;0.787 FUNCTIONAL_SNP rs1381171 chr1 61042598 Intron 7 16661 CEU:1.0;0.876, CHB:0.948;0.855, JPT:0.944;0.736 FUNCTIONAL_SNP rs6661702 chr1 61036815 Intron 7 22444 CEU:1.0;0.919, CHB:0.945;0.849, JPT:1.0;0.904, YRI:0.823;0.559 FUNCTIONAL_SNP rs12094280 chr1 61054111 Intron 7 5148 CEU:1.0;0.842, CHB:1.0;0.785, JPT:1.0;0.787 FUNCTIONAL_SNP rs10889186 chr1 61010520 Intron 7 48739 CEU:1.0;0.805, JPT:0.885;0.644 FUNCTIONAL_SNP rs528598 chr1 61060513 Intron 7 1254 CEU:1.0;0.883, CHB:1.0;0.772, JPT:1.0;0.822 FUNCTIONAL_SNP rs10889191 chr1 61068675 Intron 7 9416 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs10889187 chr1 61010758 Intron 7 48501 CEU:1.0;0.805, JPT:0.888;0.651 FUNCTIONAL_SNP rs552294 chr1 61062142 Intron 7 2883 CEU:1.0;0.959, CHB:1.0;0.772, JPT:1.0;0.822 FUNCTIONAL_SNP rs1461356 chr1 61037015 Intron 7 22244 CEU:1.0;0.918, CHB:0.949;0.901, JPT:1.0;0.907, YRI:1.0;0.643 LEAD_SNP rs472913 chr1 61095558 Intron 7 ASSOCIATION 19416921 Bipolar disorder 6.69897000434 C1orf87 - NFIA FUNCTIONAL_SNP rs494011 chr1 61112137 Intergenic 6 16579 CEU:1.0;0.927, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs814197 chr1 61092456 Intron 6 3102 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs489543 chr1 61121872 Intergenic 6 26314 CEU:1.0;0.963, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs564367 chr1 61118931 Intergenic 7 23373 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1841565 chr1 61079792 Intron 7 15766 CEU:1.0;0.963, CHB:1.0;0.95, JPT:1.0;0.913, YRI:0.964;0.898 LEAD_SNP rs6691768 chr1 61791863 Intron 5a ASSOCIATION 20190752 Celiac disease 7.0 NFIA FUNCTIONAL_SNP rs2806442 chr1 61788766 Intron 4 3097 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs2782540 chr1 61776141 Intron 5a 15722 CEU:1.0;1.0, CHB:1.0;0.794, JPT:1.0;0.865 LEAD_SNP rs9436640 chr1 61873677 Intron 7 ASSOCIATION 21076409 Ventricular conduction 17.3010299957 NFIA FUNCTIONAL_SNP rs2103883 chr1 61877378 Intron 6 3701 CEU:1.0;0.961, CHB:1.0;0.825, JPT:1.0;0.679, YRI:1.0;0.925 LEAD_SNP rs1167998 chr1 62931632 Intron 7 ASSOCIATION 19060911 Triglycerides 11.6989700043 DOCK7 FUNCTIONAL_SNP rs1168009 chr1 62943954 Exon,non-coding 7 12322 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.946;0.809 FUNCTIONAL_SNP rs1168010 chr1 62943979 Exon,non-coding 7 12347 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.851 FUNCTIONAL_SNP rs583609 chr1 62916796 Exon,non-coding 6 14836 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs630144 chr1 62918864 Intergenic 2a 12768 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168042 chr1 62974150 Intron 2b 42518 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs631106 chr1 62901807 Intergenic 4 29825 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1627591 chr1 62989807 Intron 5a 58175 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs641540 chr1 62908538 Intron 5b 23094 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs636497 chr1 62920029 Intergenic 5b 11603 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.852 FUNCTIONAL_SNP rs1748197 chr1 63056112 Intron 5b 124480 CEU:1.0;1.0, CHB:1.0;0.874, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs656297 chr1 62907595 Intron 5b 24037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1183260 chr1 62945418 Intron 6 13786 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1184865 chr1 62973795 Intron 6 42163 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1007205 chr1 62936912 Intron 6 5280 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs10889347 chr1 63075826 Intron 6 144194 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs10889350 chr1 63085266 Intron 6 153634 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168013 chr1 62996838 Intron 6 65206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168022 chr1 63007721 Intron 6 76089 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168032 chr1 62967747 Intron 6 36115 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1748195 chr1 63049593 Intron 6 117961 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1748201 chr1 63045506 Intron 6 113874 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;0.904, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168099 chr1 63122859 Intron 6 191227 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs7539035 chr1 63106767 Intron 6 175135 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs634341 chr1 62921422 Intron 6 10210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168023 chr1 63006595 Intron 6 74963 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.897 FUNCTIONAL_SNP rs1781195 chr1 62988972 Intron 6 57340 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs6678483 chr1 63074442 Intron 6 142810 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs11577840 chr1 62991369 Intron 6 59737 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs624660 chr1 62920388 Intergenic 7 11244 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4329540 chr1 63027024 Intron 7 95392 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.903 FUNCTIONAL_SNP rs597078 chr1 62917857 Intergenic 7 13775 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10889349 chr1 63081919 Intron 7 150287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168026 chr1 62970996 Intron 7 39364 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168030 chr1 62968491 Intron 7 36859 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.901 FUNCTIONAL_SNP rs1168031 chr1 62967987 Intron 7 36355 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168036 chr1 62962734 Intron 7 31102 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.942 FUNCTIONAL_SNP rs2366638 chr1 63099577 Intron 7 167945 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs6675401 chr1 63073975 Intron 7 142343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.853 FUNCTIONAL_SNP rs1002687 chr1 62963737 Intron 7 32105 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs659656 chr1 62912120 Intron 7 19512 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs10157265 chr1 63093617 Intron 7 161985 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168086 chr1 63112389 Intron 7 180757 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.855 FUNCTIONAL_SNP rs1748199 chr1 63057136 Intron 7 125504 CEU:1.0;1.0, CHB:1.0;0.874, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1748200 chr1 63046039 Intron 7 114407 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs10789117 chr1 63072265 Intron 7 140633 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.861 FUNCTIONAL_SNP rs637723 chr1 62906728 Intron 7 24904 CEU:1.0;0.956, CHB:1.0;0.882, JPT:1.0;0.821, YRI:1.0;1.0 FUNCTIONAL_SNP rs642845 chr1 62908235 Intron 7 23397 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.903, YRI:1.0;0.948 FUNCTIONAL_SNP rs11207981 chr1 63006087 Intron 7 74455 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs638305 chr1 62906537 Intron 7 25095 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6690733 chr1 63060311 Intron 7 128679 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs783291 chr1 62914978 Intron 7 16654 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2131925 chr1 63025942 Intron 7 94310 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1781212 chr1 62977419 Intron 7 45787 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs597470 chr1 62917796 Intergenic 7 13836 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1781221 chr1 63006842 Intron 7 75210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 LEAD_SNP rs1168013 chr1 62996838 Intron 6 ASSOCIATION 20864672 Triglycerides 7.22184874962 DOCK7 FUNCTIONAL_SNP rs10889335 chr1 62960101 Coding 7 36737 CEU:0.954;0.911, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs12042319 chr1 63049819 Exon,non-coding 6 52981 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs1168009 chr1 62943954 Exon,non-coding 7 52884 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.901;0.811 FUNCTIONAL_SNP rs1168010 chr1 62943979 Exon,non-coding 7 52859 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.855 FUNCTIONAL_SNP rs11208007 chr1 63176083 Exon,non-coding 7 179245 CEU:0.944;0.892, CHB:1.0;0.665, JPT:1.0;0.778 FUNCTIONAL_SNP rs583609 chr1 62916796 Exon,non-coding 6 80042 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs630144 chr1 62918864 Intergenic 2a 77974 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168042 chr1 62974150 Intron 2b 22688 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168107 chr1 63161173 Intron 3a 164335 CEU:0.954;0.911, CHB:0.796;0.634, JPT:1.0;0.64, YRI:0.948;0.779 FUNCTIONAL_SNP rs880694 chr1 63173284 Intron 4 176446 CEU:1.0;0.956, CHB:0.796;0.634, JPT:1.0;0.64, YRI:0.948;0.78 FUNCTIONAL_SNP rs1168113 chr1 63156098 Intron 4 159260 CEU:1.0;0.956, CHB:0.862;0.697, YRI:0.951;0.904 FUNCTIONAL_SNP rs1168114 chr1 63156043 Intron 4 159205 CEU:1.0;0.956, CHB:1.0;0.813, JPT:1.0;1.0, YRI:0.948;0.78 FUNCTIONAL_SNP rs10493322 chr1 62905893 Intron 4 90945 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs631106 chr1 62901807 Intergenic 4 95031 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168132 chr1 63133468 Intron 5a 136630 CEU:1.0;0.878, CHB:1.0;1.0, JPT:1.0;0.887, YRI:1.0;1.0 FUNCTIONAL_SNP rs1570694 chr1 63103217 Intron 5a 106379 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs1627591 chr1 62989807 Intron 5a 7031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs641540 chr1 62908538 Intron 5b 88300 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs636497 chr1 62920029 Intergenic 5b 76809 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.856 FUNCTIONAL_SNP rs636523 chr1 62920008 Intergenic 5b 76830 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs11207969 chr1 62911751 Intron 5b 85087 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1748197 chr1 63056112 Intron 5b 59274 CEU:1.0;1.0, CHB:1.0;0.874, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10889353 chr1 63118196 Intron 5b 121358 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs656297 chr1 62907595 Intron 5b 89243 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1183260 chr1 62945418 Intron 6 51420 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs6587980 chr1 63090858 Intron 6 94020 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.616 FUNCTIONAL_SNP rs1184865 chr1 62973795 Intron 6 23043 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1007205 chr1 62936912 Intron 6 59926 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.901;0.812 FUNCTIONAL_SNP rs10889332 chr1 62950858 Intron 6 45980 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10889334 chr1 62957199 Intron 6 39639 CEU:1.0;0.955, CHB:1.0;0.753, JPT:1.0;0.794 FUNCTIONAL_SNP rs10889337 chr1 62980607 Intron 6 16231 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.592 FUNCTIONAL_SNP rs10889347 chr1 63075826 Intron 6 78988 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10889350 chr1 63085266 Intron 6 88428 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12136083 chr1 63163073 Intron 6 166235 CEU:0.954;0.911, CHB:1.0;0.697, JPT:1.0;0.796 FUNCTIONAL_SNP rs1168022 chr1 63007721 Intron 6 10883 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168032 chr1 62967747 Intron 6 29091 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168045 chr1 62982891 Intron 6 13947 CEU:1.0;1.0, CHB:1.0;0.731, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs995000 chr1 63107526 Intron 6 110688 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs2029763 chr1 63013134 Intron 6 16296 CEU:1.0;0.951, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs1168089 chr1 63113719 Intron 6 116881 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs1748195 chr1 63049593 Intron 6 52755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1748201 chr1 63045506 Intron 6 48668 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168124 chr1 63139730 Intron 6 142892 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs4350231 chr1 62922660 Intron 6 74178 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs7518497 chr1 63177696 Intergenic 6 180858 CEU:0.954;0.911, CHB:1.0;0.697, JPT:1.0;0.796 FUNCTIONAL_SNP rs3913007 chr1 62921586 Intron 6 75252 CEU:1.0;0.955, CHB:1.0;0.753, JPT:1.0;0.796 FUNCTIONAL_SNP rs10158897 chr1 62912919 Intron 6 83919 CEU:0.954;0.911, CHB:0.919;0.687, JPT:1.0;0.796 FUNCTIONAL_SNP rs11207995 chr1 63049551 Intron 6 52713 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs11208000 chr1 63108374 Intron 6 111536 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs1168099 chr1 63122859 Intron 6 126021 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4409689 chr1 63177365 Intergenic 6 180527 CEU:1.0;0.956, CHB:0.796;0.634, JPT:1.0;0.64, YRI:0.948;0.78 FUNCTIONAL_SNP rs7539035 chr1 63106767 Intron 6 109929 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs634341 chr1 62921422 Intron 6 75416 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs3850634 chr1 63050598 Intron 6 53760 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs1168023 chr1 63006595 Intron 6 9757 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11485618 chr1 63094207 Intron 6 97369 CEU:1.0;0.955, CHB:1.0;0.72, JPT:1.0;0.795 FUNCTIONAL_SNP rs1781195 chr1 62988972 Intron 6 7866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6678483 chr1 63074442 Intron 6 77604 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11577840 chr1 62991369 Intron 6 5469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7555577 chr1 63034363 Intron 6 37525 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs998403 chr1 62928549 Intron 7 68289 CEU:1.0;0.954, CHB:1.0;0.752, JPT:1.0;0.778 FUNCTIONAL_SNP rs12090886 chr1 62981440 Intron 7 15398 CEU:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs624660 chr1 62920388 Intergenic 7 76450 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs4329540 chr1 63027024 Intron 7 30186 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4587594 chr1 63133930 Intron 7 137092 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs597078 chr1 62917857 Intergenic 7 78981 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs12116574 chr1 63037837 Intron 7 40999 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs10889333 chr1 62957030 Intron 7 39808 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs1167998 chr1 62931632 Intron 7 65206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs10889349 chr1 63081919 Intron 7 85081 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10889352 chr1 63099023 Intron 7 102185 CEU:1.0;0.95, CHB:1.0;0.738, JPT:1.0;0.775 FUNCTIONAL_SNP rs1168018 chr1 63001120 Intron 7 4282 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.793 FUNCTIONAL_SNP rs10159255 chr1 63020816 Intron 7 23978 CEU:0.954;0.911, CHB:0.919;0.687, JPT:1.0;0.796 FUNCTIONAL_SNP rs1168026 chr1 62970996 Intron 7 25842 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168030 chr1 62968491 Intron 7 28347 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168031 chr1 62967987 Intron 7 28851 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168036 chr1 62962734 Intron 7 34104 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168040 chr1 62960575 Intron 7 36263 CEU:1.0;0.955, CHB:1.0;0.936, JPT:1.0;0.751, YRI:1.0;0.951 FUNCTIONAL_SNP rs2366638 chr1 63099577 Intron 7 102739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6675401 chr1 63073975 Intron 7 77137 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs1002687 chr1 62963737 Intron 7 33101 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs659656 chr1 62912120 Intron 7 84718 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;0.904 FUNCTIONAL_SNP rs10157265 chr1 63093617 Intron 7 96779 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168085 chr1 63112320 Intron 7 115482 CEU:1.0;0.826, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs1168086 chr1 63112389 Intron 7 115551 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs1748199 chr1 63057136 Intron 7 60298 CEU:1.0;1.0, CHB:1.0;0.874, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1748200 chr1 63046039 Intron 7 49201 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10789117 chr1 63072265 Intron 7 75427 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs10789118 chr1 63094692 Intron 7 97854 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs10789119 chr1 63098235 Intron 7 101397 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs9787151 chr1 63179138 Intergenic 7 182300 CEU:1.0;0.956, CHB:0.787;0.62, JPT:1.0;0.64, YRI:0.948;0.78 FUNCTIONAL_SNP rs637723 chr1 62906728 Intron 7 90110 CEU:1.0;0.956, CHB:1.0;0.882, JPT:1.0;0.821, YRI:1.0;0.904 FUNCTIONAL_SNP rs642845 chr1 62908235 Intron 7 88603 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.903, YRI:0.947;0.851 FUNCTIONAL_SNP rs11207974 chr1 62949960 Intron 7 46878 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11207981 chr1 63006087 Intron 7 9249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11207990 chr1 63041086 Intron 7 44248 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.845 FUNCTIONAL_SNP rs6682423 chr1 63171063 Intron 7 174225 CEU:1.0;0.956, CHB:0.796;0.634, JPT:1.0;0.64, YRI:0.948;0.78 FUNCTIONAL_SNP rs11207992 chr1 63041800 Intron 7 44962 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs11208004 chr1 63145439 Intron 7 148601 CEU:1.0;0.955, CHB:1.0;0.754, JPT:1.0;0.796 FUNCTIONAL_SNP rs1979722 chr1 62940097 Intron 7 56741 CEU:0.954;0.91, CHB:0.785;0.616, JPT:0.785;0.616 FUNCTIONAL_SNP rs638305 chr1 62906537 Intron 7 90301 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs11207997 chr1 63061906 Intron 7 65068 CEU:0.954;0.869, CHB:1.0;0.938, JPT:1.0;0.903, YRI:1.0;0.592 FUNCTIONAL_SNP rs6690733 chr1 63060311 Intron 7 63473 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs783291 chr1 62914978 Intron 7 81860 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs2131925 chr1 63025942 Intron 7 29104 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1781212 chr1 62977419 Intron 7 19419 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs597470 chr1 62917796 Intergenic 7 79042 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1781221 chr1 63006842 Intron 7 10004 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1748195 chr1 63049593 Intron 6 ASSOCIATION 18193043 Triglycerides 9.69897000434 DOCK7 FUNCTIONAL_SNP rs1168009 chr1 62943954 Exon,non-coding 7 105639 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.9;0.81 FUNCTIONAL_SNP rs1168010 chr1 62943979 Exon,non-coding 7 105614 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.854 FUNCTIONAL_SNP rs583609 chr1 62916796 Exon,non-coding 6 132797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs630144 chr1 62918864 Intergenic 2a 130729 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168042 chr1 62974150 Intron 2b 75443 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs631106 chr1 62901807 Intergenic 4 147786 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168132 chr1 63133468 Intron 5a 83875 CEU:1.0;0.878, CHB:1.0;1.0, JPT:1.0;0.887, YRI:1.0;1.0 FUNCTIONAL_SNP rs1627591 chr1 62989807 Intron 5a 59786 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs641540 chr1 62908538 Intron 5b 141055 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs636497 chr1 62920029 Intergenic 5b 129564 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.855 FUNCTIONAL_SNP rs1748197 chr1 63056112 Intron 5b 6519 CEU:1.0;1.0, CHB:1.0;0.874, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs656297 chr1 62907595 Intron 5b 141998 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1183260 chr1 62945418 Intron 6 104175 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1184865 chr1 62973795 Intron 6 75798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1007205 chr1 62936912 Intron 6 112681 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.901;0.811 FUNCTIONAL_SNP rs10889347 chr1 63075826 Intron 6 26233 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10889350 chr1 63085266 Intron 6 35673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168013 chr1 62996838 Intron 6 52755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168022 chr1 63007721 Intron 6 41872 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168032 chr1 62967747 Intron 6 81846 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168089 chr1 63113719 Intron 6 64126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs1168099 chr1 63122859 Intron 6 73266 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1748201 chr1 63045506 Intron 6 4087 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168124 chr1 63139730 Intron 6 90137 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.812 FUNCTIONAL_SNP rs11208000 chr1 63108374 Intron 6 58781 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs7539035 chr1 63106767 Intron 6 57174 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs634341 chr1 62921422 Intron 6 128171 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1168023 chr1 63006595 Intron 6 42998 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1781195 chr1 62988972 Intron 6 60621 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6678483 chr1 63074442 Intron 6 24849 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11577840 chr1 62991369 Intron 6 58224 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7555577 chr1 63034363 Intron 6 15230 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs624660 chr1 62920388 Intergenic 7 129205 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs4329540 chr1 63027024 Intron 7 22569 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs597078 chr1 62917857 Intergenic 7 131736 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs1167998 chr1 62931632 Intron 7 117961 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs10889349 chr1 63081919 Intron 7 32326 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168026 chr1 62970996 Intron 7 78597 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168030 chr1 62968491 Intron 7 81102 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168031 chr1 62967987 Intron 7 81606 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168036 chr1 62962734 Intron 7 86859 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2366638 chr1 63099577 Intron 7 49984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1002687 chr1 62963737 Intron 7 85856 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs659656 chr1 62912120 Intron 7 137473 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;0.904 FUNCTIONAL_SNP rs10157265 chr1 63093617 Intron 7 44024 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1168085 chr1 63112320 Intron 7 62727 CEU:1.0;0.826, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs1168086 chr1 63112389 Intron 7 62796 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.901 FUNCTIONAL_SNP rs1748199 chr1 63057136 Intron 7 7543 CEU:1.0;1.0, CHB:1.0;0.874, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1748200 chr1 63046039 Intron 7 3554 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10789117 chr1 63072265 Intron 7 22672 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs637723 chr1 62906728 Intron 7 142865 CEU:1.0;0.956, CHB:1.0;0.882, JPT:1.0;0.821, YRI:1.0;0.904 FUNCTIONAL_SNP rs642845 chr1 62908235 Intron 7 141358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.903, YRI:0.946;0.85 FUNCTIONAL_SNP rs11207981 chr1 63006087 Intron 7 43506 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs638305 chr1 62906537 Intron 7 143056 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs6690733 chr1 63060311 Intron 7 10718 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs783291 chr1 62914978 Intron 7 134615 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs6675401 chr1 63073975 Intron 7 24382 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs2131925 chr1 63025942 Intron 7 23651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1781212 chr1 62977419 Intron 7 72174 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs597470 chr1 62917796 Intergenic 7 131797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1781221 chr1 63006842 Intron 7 42751 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10889353 chr1 63118196 Intron 5b ASSOCIATION 19060911 Cholesterol, total 11.3979400087 DOCK7 ASSOCIATION 19060911 LDL cholesterol 5.09691001301 DOCK7 ASSOCIATION 19060906 Triglycerides 6.52287874528 DOCK7 FUNCTIONAL_SNP rs12042319 chr1 63049819 Exon,non-coding 6 68377 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.86 FUNCTIONAL_SNP rs1570694 chr1 63103217 Intron 5a 14979 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs995000 chr1 63107526 Intron 6 10670 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs2029763 chr1 63013134 Intron 6 105062 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11207995 chr1 63049551 Intron 6 68645 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3850634 chr1 63050598 Intron 6 67598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11485618 chr1 63094207 Intron 6 23989 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4587594 chr1 63133930 Intron 7 15734 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs12116574 chr1 63037837 Intron 7 80359 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10159255 chr1 63020816 Intron 7 97380 CEU:1.0;0.955, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs10789118 chr1 63094692 Intron 7 23504 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10789119 chr1 63098235 Intron 7 19961 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10889352 chr1 63099023 Intron 7 19173 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11207992 chr1 63041800 Intron 7 76396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11208004 chr1 63145439 Intron 7 27243 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12130333 chr1 63191777 Intergenic 4 ASSOCIATION 18193044 Triglycerides 7.69897000434 RPL13AP9 - ATG4C LEAD_SNP rs17124318 chr1 63480730 Intergenic 7 ASSOCIATION 20966902 Body mass index 6.22184874962 ATG4C - FOXD3 ASSOCIATION 20966902 Weight 5.39794000867 ATG4C - FOXD3 LEAD_SNP rs7526034 chr1 63586973 Intergenic 7 ASSOCIATION 20100581 Brain imaging 0 - FUNCTIONAL_SNP rs11208138 chr1 63614947 Intron 4 27974 CEU:1.0;0.918, CHB:0.882;0.614, JPT:0.732;0.511 FUNCTIONAL_SNP rs10889406 chr1 63599390 Intergenic 5b 12417 CEU:1.0;1.0, CHB:1.0;0.867, JPT:1.0;0.949 FUNCTIONAL_SNP rs11208135 chr1 63595515 Intergenic 5b 8542 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs12405572 chr1 63597260 Intergenic 7 10287 CEU:1.0;1.0, CHB:0.949;0.82, JPT:1.0;0.953 FUNCTIONAL_SNP rs11208134 chr1 63591768 Intergenic 7 4795 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs12045168 chr1 63614044 Intron 7 27071 CEU:1.0;1.0, CHB:0.854;0.729, JPT:0.942;0.729 FUNCTIONAL_SNP rs12031051 chr1 63589418 Intergenic 7 2445 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 LEAD_SNP rs10493340 chr1 63591129 Intergenic 6 ASSOCIATION 17903302 Blood pressure 5.69897000434 ATG4C - FOXD3 LEAD_SNP rs2269241 chr1 64108771 Intron 5b ASSOCIATION 19430480 Type 1 diabetes 6.39794000867 PGM1 LEAD_SNP rs2749097 chr1 64127468 Intergenic 5b ASSOCIATION 21665994 Alcohol consumption 8.69897000434 PGM1 - ROR1 FUNCTIONAL_SNP rs4643 chr1 64125439 Exon,non-coding 6 2029 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8294 chr1 64125368 Exon,non-coding 7 2100 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11208261 chr1 64124002 Intron 7 3466 CEU:1.0;0.906, CHB:0.899;0.809, JPT:1.0;0.526 FUNCTIONAL_SNP rs2749100 chr1 64124979 Intron 7 2489 CEU:1.0;0.838, CHB:1.0;0.754 FUNCTIONAL_SNP rs2269235 chr1 64118915 Intron 7 8553 CEU:1.0;0.906 FUNCTIONAL_SNP rs2269246 chr1 64107491 Intron 7 19977 CEU:1.0;0.814 FUNCTIONAL_SNP rs11208264 chr1 64125072 Intron 7 2396 CEU:1.0;0.838, CHB:1.0;0.754 FUNCTIONAL_SNP rs11208265 chr1 64125234 Intron 7 2234 CEU:1.0;0.838, CHB:1.0;0.754 LEAD_SNP rs1751492 chr1 65992625 Intron 5b ASSOCIATION 20167575 Soluble leptin receptor levels 12.2218487496 LEPR FUNCTIONAL_SNP rs1137100 chr1 66036441 Coding 7 43816 CEU:1.0;0.808, CHB:0.887;0.646, JPT:0.924;0.853 FUNCTIONAL_SNP rs1046011 chr1 65898996 Exon,non-coding 7 93629 CEU:0.914;0.801 FUNCTIONAL_SNP rs1782754 chr1 65993348 Intron 2b 723 CEU:1.0;0.959, CHB:1.0;0.823, JPT:1.0;0.811 FUNCTIONAL_SNP rs3790425 chr1 66043112 Intron 3a 50487 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927 FUNCTIONAL_SNP rs1327116 chr1 65976051 Intron 4 16574 CEU:0.956;0.875, CHB:0.892;0.719, JPT:0.823;0.581 FUNCTIONAL_SNP rs1171262 chr1 66001746 Intron 4 9121 CEU:1.0;0.959, CHB:1.0;0.824, JPT:1.0;0.93 FUNCTIONAL_SNP rs1171263 chr1 66001933 Intron 4 9308 CEU:1.0;0.955, CHB:1.0;0.81, JPT:1.0;1.0, YRI:1.0;0.503 FUNCTIONAL_SNP rs6697315 chr1 65993556 Intron 4 931 CEU:1.0;0.849, CHB:1.0;0.604, YRI:1.0;0.574 FUNCTIONAL_SNP rs3790427 chr1 66042750 Intron 5a 50125 CEU:1.0;0.808, CHB:0.889;0.65, JPT:0.925;0.856 FUNCTIONAL_SNP rs1475398 chr1 65983257 Intron 5a 9368 CEU:0.958;0.919, CHB:0.892;0.719, JPT:0.823;0.581 FUNCTIONAL_SNP rs1171274 chr1 65980838 Intron 5a 11787 CEU:0.958;0.88, CHB:0.892;0.719, JPT:0.823;0.581, YRI:0.944;0.643 FUNCTIONAL_SNP rs4655528 chr1 66049489 Intron 5a 56864 CEU:1.0;0.837, CHB:1.0;0.897, JPT:1.0;0.927 FUNCTIONAL_SNP rs12038998 chr1 66049128 Intron 5a 56503 CEU:1.0;0.841, CHB:1.0;0.897, JPT:1.0;0.919 FUNCTIONAL_SNP rs11208677 chr1 66048417 Intron 5a 55792 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927, YRI:0.903;0.713 FUNCTIONAL_SNP rs12033452 chr1 66038435 Intron 5b 45810 CEU:1.0;0.839, CHB:1.0;0.897, JPT:1.0;0.927, YRI:0.886;0.567 FUNCTIONAL_SNP rs6657632 chr1 66038666 Intron 5b 46041 CEU:1.0;0.867, CHB:1.0;0.897, JPT:1.0;0.927, YRI:0.902;0.711 FUNCTIONAL_SNP rs12042877 chr1 66053148 Intron 5b 60523 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927 FUNCTIONAL_SNP rs12042884 chr1 66053192 Intron 5b 60567 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927 FUNCTIONAL_SNP rs12068561 chr1 65973953 Intron 5b 18672 CEU:0.956;0.876, CHB:0.883;0.779, JPT:0.823;0.581 FUNCTIONAL_SNP rs11208657 chr1 65973353 Intron 5b 19272 CEU:1.0;0.865, CHB:0.894;0.799, JPT:0.891;0.607 FUNCTIONAL_SNP rs2104564 chr1 65969430 Intron 5b 23195 CEU:0.958;0.88, CHB:0.892;0.719, JPT:0.822;0.578 FUNCTIONAL_SNP rs1171264 chr1 66003014 Intron 5b 10389 CEU:1.0;0.959, CHB:1.0;0.824, JPT:1.0;0.93 FUNCTIONAL_SNP rs1171266 chr1 66003824 Intron 5b 11199 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.941;0.606 FUNCTIONAL_SNP rs1171267 chr1 66003854 Intron 5b 11229 CEU:1.0;0.843, CHB:1.0;0.569, YRI:0.794;0.573 FUNCTIONAL_SNP rs1751484 chr1 66019891 Intron 5b 27266 CEU:1.0;0.958, CHB:1.0;0.822, JPT:1.0;0.929 FUNCTIONAL_SNP rs1782763 chr1 66007900 Intron 5b 15275 CEU:0.956;0.808 FUNCTIONAL_SNP rs1022981 chr1 66000034 Intron 6 7409 CEU:1.0;0.959, CHB:1.0;0.753, JPT:1.0;0.93 FUNCTIONAL_SNP rs6691346 chr1 66046397 Intron 6 53772 CEU:1.0;0.837, CHB:1.0;0.897, JPT:1.0;0.924 FUNCTIONAL_SNP rs12028951 chr1 66053081 Intron 6 60456 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927 FUNCTIONAL_SNP rs1938487 chr1 66047267 Intron 6 54642 CEU:1.0;0.835, CHB:1.0;0.897, JPT:1.0;0.924 FUNCTIONAL_SNP rs1409802 chr1 66021351 Intron 6 28726 CEU:1.0;0.844, CHB:0.889;0.65, JPT:0.925;0.856 FUNCTIONAL_SNP rs3828039 chr1 66053556 Intron 6 60931 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927, YRI:0.77;0.545 FUNCTIONAL_SNP rs4370791 chr1 66052228 Intron 6 59603 CEU:1.0;0.831, CHB:0.883;0.78, JPT:1.0;0.908 FUNCTIONAL_SNP rs1171265 chr1 66003252 Intron 6 10627 CEU:1.0;0.816, CHB:1.0;0.604 FUNCTIONAL_SNP rs4655518 chr1 66039858 Intron 6 47233 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927, YRI:0.886;0.567 FUNCTIONAL_SNP rs11208675 chr1 66045424 Intron 6 52799 CEU:1.0;0.841, CHB:0.894;0.8, JPT:1.0;0.924 FUNCTIONAL_SNP rs6676495 chr1 66052117 Intron 7 59492 CEU:1.0;0.831 FUNCTIONAL_SNP rs7533108 chr1 65977844 Intron 7 14781 CEU:0.954;0.871 FUNCTIONAL_SNP rs4655680 chr1 66041469 Intron 7 48844 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927 FUNCTIONAL_SNP rs1177681 chr1 65999119 Intron 7 6494 CEU:1.0;0.958, CHB:1.0;0.811, JPT:1.0;1.0 FUNCTIONAL_SNP rs3790424 chr1 66044013 Intron 7 51388 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927, YRI:0.903;0.713 FUNCTIONAL_SNP rs1186403 chr1 66000533 Intron 7 7908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.797 FUNCTIONAL_SNP rs7516840 chr1 65972595 Intron 7 20030 CEU:0.955;0.874, CHB:0.892;0.719, JPT:0.823;0.581 FUNCTIONAL_SNP rs4655811 chr1 65923157 Intron 7 69468 CEU:0.915;0.804 FUNCTIONAL_SNP rs1171261 chr1 66001402 Intron 7 8777 CEU:1.0;0.959, CHB:1.0;0.824, JPT:1.0;0.93 FUNCTIONAL_SNP rs1171272 chr1 65999811 Intron 7 7186 CEU:1.0;0.956, CHB:1.0;0.824, JPT:1.0;0.919 FUNCTIONAL_SNP rs11208674 chr1 66039317 Intron 7 46692 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927, YRI:0.886;0.567 FUNCTIONAL_SNP rs10889556 chr1 65969552 Intron 7 23073 CEU:0.958;0.88, CHB:0.892;0.719, JPT:0.823;0.581 FUNCTIONAL_SNP rs10889557 chr1 65970704 Intron 7 21921 CEU:0.957;0.843, CHB:0.892;0.719, JPT:0.823;0.581 FUNCTIONAL_SNP rs10889558 chr1 65976966 Intron 7 15659 CEU:0.958;0.88, CHB:0.892;0.719, JPT:0.823;0.581 FUNCTIONAL_SNP rs10789184 chr1 66036962 Intron 7 44337 CEU:1.0;0.808, CHB:0.889;0.65, JPT:0.925;0.856 FUNCTIONAL_SNP rs2154381 chr1 65995701 Intron 7 3076 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.75 FUNCTIONAL_SNP rs1171269 chr1 65996802 Intron 7 4177 CEU:1.0;0.959, CHB:1.0;0.824, JPT:1.0;0.93, YRI:1.0;0.686 FUNCTIONAL_SNP rs1171270 chr1 65997841 Intron 7 5216 CEU:1.0;0.959, CHB:1.0;0.824, JPT:1.0;0.926 FUNCTIONAL_SNP rs1171271 chr1 65998790 Intron 7 6165 CEU:1.0;0.957, CHB:1.0;0.824, JPT:1.0;0.922 FUNCTIONAL_SNP rs10493379 chr1 66045927 Intron 7 53302 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927, YRI:0.886;0.567 FUNCTIONAL_SNP rs11208676 chr1 66048123 Intron 7 55498 CEU:1.0;0.833, CHB:1.0;0.897, JPT:1.0;0.924 FUNCTIONAL_SNP rs11208679 chr1 66049738 Intron 7 57113 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927 FUNCTIONAL_SNP rs1343981 chr1 66045328 Intron 7 52703 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927, YRI:0.887;0.568 FUNCTIONAL_SNP rs1343982 chr1 66045251 Intron 7 52626 CEU:1.0;0.844, CHB:1.0;0.897, JPT:1.0;0.927, YRI:0.903;0.713 LEAD_SNP rs6700896 chr1 66089782 Intron 3a ASSOCIATION 19567438 C-reactive protein 13.5228787453 LEPR FUNCTIONAL_SNP rs1805096 chr1 66102257 Coding 7 12475 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1892534 chr1 66105944 Exon,non-coding 7 16162 CEU:0.955;0.873, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs12753193 chr1 66169679 Intergenic 3a 79897 CEU:0.954;0.835, CHB:0.881;0.696, JPT:1.0;0.877, YRI:0.811;0.658 FUNCTIONAL_SNP rs4655582 chr1 66153363 Intergenic 4 63581 CEU:1.0;0.914, CHB:1.0;0.739, JPT:1.0;0.72 FUNCTIONAL_SNP rs7531867 chr1 66107546 Intergenic 5b 17764 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs6678033 chr1 66077624 Intron 6 12158 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.864;0.593 FUNCTIONAL_SNP rs4420065 chr1 66161461 Intergenic 6 71679 CEU:1.0;0.917, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.92;0.759 FUNCTIONAL_SNP rs2889195 chr1 66156730 Intergenic 6 66948 CEU:1.0;0.917, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs11208711 chr1 66147846 Intergenic 7 58064 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs12042779 chr1 66133950 Intergenic 7 44168 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs10889569 chr1 66086194 Intron 7 3588 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.863;0.592 FUNCTIONAL_SNP rs7516341 chr1 66088143 Intron 7 1639 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.867;0.6 FUNCTIONAL_SNP rs7541434 chr1 66168499 Intergenic 7 78717 CEU:0.954;0.835, CHB:0.882;0.698, JPT:1.0;0.877 FUNCTIONAL_SNP rs1938492 chr1 66117829 Intergenic 7 28047 CEU:1.0;0.955 FUNCTIONAL_SNP rs2211651 chr1 66156021 Intergenic 7 66239 CEU:1.0;0.917, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4655557 chr1 66080787 Intron 7 8995 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.867;0.6 FUNCTIONAL_SNP rs4655585 chr1 66155627 Intergenic 7 65845 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs10789192 chr1 66125770 Intergenic 7 35988 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs12042807 chr1 66134052 Intergenic 7 44270 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs4655584 chr1 66155515 Intergenic 7 65733 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs7524581 chr1 66166499 Intergenic 7 76717 CEU:0.954;0.835, CHB:0.871;0.514, JPT:1.0;0.72, YRI:0.95;0.561 FUNCTIONAL_SNP rs6588158 chr1 66160621 Intergenic 7 70839 CEU:1.0;0.917, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;0.964 LEAD_SNP rs1892534 chr1 66105944 Exon,non-coding 7 ASSOCIATION 18439548 C-reactive protein 20.15490196 LEPROT - PDE4B FUNCTIONAL_SNP rs1805096 chr1 66102257 Coding 7 3687 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6700896 chr1 66089782 Intron 3a 16162 CEU:0.955;0.873, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs7531867 chr1 66107546 Intergenic 5b 1602 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2889195 chr1 66156730 Intergenic 6 50786 CEU:1.0;0.957, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs12042779 chr1 66133950 Intergenic 7 28006 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11208711 chr1 66147846 Intergenic 7 41902 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2211651 chr1 66156021 Intergenic 7 50077 CEU:1.0;0.957, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4655585 chr1 66155627 Intergenic 7 49683 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs10789192 chr1 66125770 Intergenic 7 19826 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12042807 chr1 66134052 Intergenic 7 28108 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4655584 chr1 66155515 Intergenic 7 49571 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6588153 chr1 66092017 Intron 7 13927 CEU:0.913;0.833, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6588158 chr1 66160621 Intergenic 7 54677 CEU:1.0;0.957, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4420065 chr1 66161461 Intergenic 6 ASSOCIATION 21300955 C-reactive protein 61.3979400087 LEPROT - PDE4B FUNCTIONAL_SNP rs1805096 chr1 66102257 Coding 7 59204 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.923;0.791 FUNCTIONAL_SNP rs1892534 chr1 66105944 Exon,non-coding 7 55517 CEU:1.0;0.957, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.923;0.791 FUNCTIONAL_SNP rs12753193 chr1 66169679 Intergenic 3a 8218 CEU:0.956;0.915, CHB:0.893;0.798, JPT:1.0;0.877, YRI:0.961;0.826 FUNCTIONAL_SNP rs6700896 chr1 66089782 Intron 3a 71679 CEU:1.0;0.917, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.92;0.759 FUNCTIONAL_SNP rs4655582 chr1 66153363 Intergenic 4 8098 CEU:1.0;1.0, CHB:0.888;0.65, JPT:1.0;0.72 FUNCTIONAL_SNP rs7531867 chr1 66107546 Intergenic 5b 53915 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.923;0.791 FUNCTIONAL_SNP rs6678033 chr1 66077624 Intron 6 83837 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs2889195 chr1 66156730 Intergenic 6 4731 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.893 FUNCTIONAL_SNP rs12042779 chr1 66133950 Intergenic 7 27511 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0, YRI:0.921;0.787 FUNCTIONAL_SNP rs11208711 chr1 66147846 Intergenic 7 13615 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.923;0.791 FUNCTIONAL_SNP rs7516341 chr1 66088143 Intron 7 73318 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs7541434 chr1 66168499 Intergenic 7 7038 CEU:0.956;0.915, CHB:0.894;0.8, JPT:1.0;0.877, YRI:0.902;0.545 FUNCTIONAL_SNP rs1938492 chr1 66117829 Intergenic 7 43632 CEU:1.0;1.0 FUNCTIONAL_SNP rs2211651 chr1 66156021 Intergenic 7 5440 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.923;0.791 FUNCTIONAL_SNP rs4655557 chr1 66080787 Intron 7 80674 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs10889569 chr1 66086194 Intron 7 75267 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs10789192 chr1 66125770 Intergenic 7 35691 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.923;0.791 FUNCTIONAL_SNP rs12042807 chr1 66134052 Intergenic 7 27409 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.92;0.784 FUNCTIONAL_SNP rs4655584 chr1 66155515 Intergenic 7 5946 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.923;0.791 FUNCTIONAL_SNP rs4655585 chr1 66155627 Intergenic 7 5834 CEU:1.0;1.0, CHB:1.0;0.896, JPT:1.0;1.0, YRI:0.886;0.757 FUNCTIONAL_SNP rs7524581 chr1 66166499 Intergenic 7 5038 CEU:0.956;0.915, CHB:0.885;0.591, JPT:1.0;0.72, YRI:1.0;0.694 FUNCTIONAL_SNP rs6588153 chr1 66092017 Intron 7 69444 CEU:0.956;0.874, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.919;0.782 FUNCTIONAL_SNP rs6588158 chr1 66160621 Intergenic 7 840 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.923;0.791 LEAD_SNP rs12753193 chr1 66169679 Intergenic 3a ASSOCIATION 19060910 Other metabolic traits 6.39794000867 LEPROT - PDE4B LEAD_SNP rs10493389 chr1 66310865 Intron 5b ASSOCIATION 17903301 Echocardiographic traits 5.15490195999 PDE4B FUNCTIONAL_SNP rs4405117 chr1 66316249 Intron 5b 5384 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12130802 chr1 66318696 Intron 6 7831 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11208761 chr1 66320604 Intron 6 9739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11208759 chr1 66309343 Intron 7 1522 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs12133189 chr1 66308433 Intron 7 2432 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10493391 chr1 66314896 Intron 7 4031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11805303 chr1 67675516 Intron 5b ASSOCIATION 17554300 Crohn's disease 11.2218487496 IL23R FUNCTIONAL_SNP rs7539625 chr1 67672765 Intron 6 2751 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs10889669 chr1 67675728 Intron 7 212 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7517847 chr1 67681669 Intron 7 ASSOCIATION 17435756 Crohn's disease 11.5228787453 IL23R ASSOCIATION 17068223 Inflammatory bowel disease 12.3979400087 IL23R LEAD_SNP rs2201841 chr1 67694202 Intron 7 ASSOCIATION 20228799 Ulcerative colitis 13.0 IL23R ASSOCIATION 19169254 Psoriasis 7.52287874528 IL23R FUNCTIONAL_SNP rs10889677 chr1 67725120 Exon,non-coding 7 30918 CEU:0.953;0.908, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs10889676 chr1 67722567 Intron 6 28365 CEU:0.953;0.908, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs11465817 chr1 67721097 Intron 7 26895 CEU:0.952;0.865, JPT:1.0;0.573 LEAD_SNP rs11465804 chr1 67702526 Intron 7 ASSOCIATION 20570966 Crohn's disease 6.0 IL23R ASSOCIATION 18587394 Crohn's disease 62.15490196 IL23R LEAD_SNP rs11209026 chr1 67705958 Coding 7 ASSOCIATION 21743469 Ankylosing spondylitis 16.6989700043 IL23R ASSOCIATION 21297633 Ulcerative colitis 27.3010299957 IL23R ASSOCIATION 21102463 Crohn's disease 64.0 IL23R ASSOCIATION 20953190 Psoriasis 6.15490195999 IL23R ASSOCIATION 20062062 Ankylosing spondylitis 13.0457574906 IL23R ASSOCIATION 19915572 Ulcerative colitis 9.52287874528 IL23R ASSOCIATION 19122664 Ulcerative colitis 8.0 IL23R ASSOCIATION 18758464 Inflammatory bowel disease 10.15490196 IL23R ASSOCIATION 17447842 Crohn's disease 17.6989700043 IL23R ASSOCIATION 17068223 Inflammatory bowel disease 10.3979400087 IL23R LEAD_SNP rs10889677 chr1 67725120 Exon,non-coding 7 ASSOCIATION 19122664 Ulcerative colitis 8.0 IL23R FUNCTIONAL_SNP rs10889676 chr1 67722567 Intron 6 2553 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2201841 chr1 67694202 Intron 7 30918 CEU:0.953;0.908, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 LEAD_SNP rs1495965 chr1 67753508 Intergenic 6 ASSOCIATION 20622879 Behcet's disease 10.6989700043 IL23R - IL12RB2 FUNCTIONAL_SNP rs1495966 chr1 67753353 Intergenic 6 155 CEU:1.0;0.959, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs924080 chr1 67760140 Intergenic 5b ASSOCIATION 20622878 Behcet's disease 8.15490195999 IL23R - IL12RB2 FUNCTIONAL_SNP rs6660226 chr1 67744601 Intergenic 7 15539 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;0.941, YRI:0.86;0.512 FUNCTIONAL_SNP rs11209039 chr1 67751193 Intergenic 7 8947 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.93 LEAD_SNP rs3790567 chr1 67822377 Intron 7 ASSOCIATION 20639880 Primary biliary cirrhosis 11.096910013 IL12RB2 ASSOCIATION 19458352 Primary biliary cirrhosis 10.5228787453 IL12RB2 FUNCTIONAL_SNP rs3790566 chr1 67814440 Intron 5b 7937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1430742 chr1 68635075 Intron 7 ASSOCIATION 19801982 Bone mineral density (spine) 12.5228787453 WLS FUNCTIONAL_SNP rs2566755 chr1 68635390 Intron 6 315 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945, YRI:0.941;0.886 LEAD_SNP rs2566755 chr1 68635390 Intron 6 ASSOCIATION 19801982 Bone mineral density (hip) 11.6989700043 WLS FUNCTIONAL_SNP rs1430742 chr1 68635075 Intron 7 315 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945, YRI:0.941;0.886 LEAD_SNP rs4147141 chr1 69579252 Intron 7 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.22184874962 AF357533 - LRRC7 ASSOCIATION 18821565 Inattentive symptoms 5.09691001301 AF357533 - LRRC7 LEAD_SNP rs4650135 chr1 69684997 Intergenic 7 ASSOCIATION 18821565 Inattentive symptoms 5.30102999566 AF357533 - LRRC7 LEAD_SNP rs10458561 chr1 70921173 Intergenic 3a ASSOCIATION 20921969 Antipsychotic-induced QTc interval prolongation 6.39794000867 CTH - PTGER3 LEAD_SNP rs10493485 chr1 72071129 Intron 7 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.69897000434 NEGR1 LEAD_SNP rs12141391 chr1 72274473 Intron 7 ASSOCIATION 18204098 Systemic lupus erythematosus 5.15490195999 NEGR1 LEAD_SNP rs2568958 chr1 72765116 Intergenic 7 ASSOCIATION 19079260 Body mass index 11.0 NEGR1 - RPL31P12 ASSOCIATION 19079260 Weight 7.69897000434 NEGR1 - RPL31P12 FUNCTIONAL_SNP rs3101336 chr1 72751185 Intergenic 5a 13931 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2815752 chr1 72812440 Intergenic 5a 47324 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11209948 chr1 72811904 Intergenic 6 46788 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.862 LEAD_SNP rs2815752 chr1 72812440 Intergenic 5a ASSOCIATION 20935630 Body mass index 21.6989700043 RPL31P12 - KRT8P21 ASSOCIATION 19079261 Body mass index 7.22184874962 RPL31P12 - KRT8P21 FUNCTIONAL_SNP rs11209951 chr1 72837490 Intergenic 4 25050 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;0.731, YRI:0.841;0.612 FUNCTIONAL_SNP rs11209952 chr1 72837500 Intergenic 4 25060 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.73 FUNCTIONAL_SNP rs3101336 chr1 72751185 Intergenic 5a 61255 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1460943 chr1 72813129 Intergenic 6 689 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11209948 chr1 72811904 Intergenic 6 536 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.862 FUNCTIONAL_SNP rs1841499 chr1 72836456 Intergenic 6 24016 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;0.731, YRI:0.879;0.644 FUNCTIONAL_SNP rs2012697 chr1 72819612 Intergenic 7 7172 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;0.731, YRI:0.879;0.644 FUNCTIONAL_SNP rs990871 chr1 72823713 Intergenic 7 11273 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;0.731, YRI:1.0;0.531 FUNCTIONAL_SNP rs2568958 chr1 72765116 Intergenic 7 47324 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10789336 chr1 72838406 Intergenic 7 25966 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;0.731, YRI:0.879;0.644 LEAD_SNP rs11210359 chr1 74339167 Intergenic 7 ASSOCIATION 21057379 Bipolar disorder and schizophrenia 5.09691001301 KRT8P21 - LRRIQ3 FUNCTIONAL_SNP rs10890083 chr1 74335353 Intergenic 5b 3814 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs3964041 chr1 74337600 Intergenic 6 1567 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs7537932 chr1 74337712 Intergenic 6 1455 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.803 FUNCTIONAL_SNP rs6672527 chr1 74338530 Intergenic 6 637 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7549862 chr1 74340819 Intergenic 6 1652 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs7545026 chr1 74340578 Intergenic 6 1411 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.922 FUNCTIONAL_SNP rs12079619 chr1 74339775 Intergenic 7 608 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs1158405 chr1 74337258 Intergenic 7 1909 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10789382 chr1 74337737 Intergenic 7 1430 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs7548098 chr1 74337724 Intergenic 7 1443 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs7534619 chr1 74336375 Intergenic 7 2792 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.874;0.764 FUNCTIONAL_SNP rs17520168 chr1 74344519 Intergenic 7 5352 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17579506 chr1 74344710 Intergenic 7 5543 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11210363 chr1 74349846 Intergenic 7 10679 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7545016 chr1 74340541 Intergenic 7 1374 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;0.921 FUNCTIONAL_SNP rs7524030 chr1 74337690 Intergenic 7 1477 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs7545797 chr1 74337673 Intergenic 7 1494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.882 FUNCTIONAL_SNP rs967881 chr1 74343741 Intergenic 7 4574 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1979216 chr1 74338975 Intergenic 7 192 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10458582 chr1 74337816 Intergenic 7 1351 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10458584 chr1 74338103 Intergenic 7 1064 CEU:0.955;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.878 FUNCTIONAL_SNP rs12085584 chr1 74340017 Intergenic 7 850 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.878 FUNCTIONAL_SNP rs10890084 chr1 74336737 Intergenic 7 2430 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1963248 chr1 74346006 Intergenic 7 6839 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11210360 chr1 74339794 Intergenic 7 627 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs11210361 chr1 74339944 Intergenic 7 777 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11210364 chr1 74350248 Intergenic 7 11081 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10458581 chr1 74336464 Intergenic 7 2703 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1514175 chr1 74991644 Intron 7 ASSOCIATION 20935630 Body mass index 13.096910013 TNNI3K FUNCTIONAL_SNP rs12042908 chr1 74997762 Intron 5b 6118 CEU:1.0;0.923 FUNCTIONAL_SNP rs6604866 chr1 74992546 Intron 5b 902 CEU:1.0;0.959 FUNCTIONAL_SNP rs12142020 chr1 75000011 Intron 5b 8367 CEU:0.915;0.838 FUNCTIONAL_SNP rs3845345 chr1 75002667 Intron 5b 11023 CEU:0.919;0.844 FUNCTIONAL_SNP rs11210478 chr1 75008411 Intron 5b 16767 CEU:0.919;0.844 FUNCTIONAL_SNP rs6656785 chr1 75005776 Intron 6 14132 CEU:0.958;0.882, CHB:1.0;0.601 FUNCTIONAL_SNP rs7551507 chr1 74995225 Intron 6 3581 CEU:1.0;0.923 FUNCTIONAL_SNP rs10789396 chr1 75014362 Intergenic 6 22718 CEU:0.958;0.847, CHB:1.0;0.813, JPT:1.0;0.904, YRI:0.892;0.547 FUNCTIONAL_SNP rs6703637 chr1 74997795 Intron 6 6151 CEU:0.917;0.841 FUNCTIONAL_SNP rs7553348 chr1 75005067 Intron 6 13423 CEU:1.0;0.923 FUNCTIONAL_SNP rs3765680 chr1 75007008 Intron 6 15364 CEU:0.919;0.844 FUNCTIONAL_SNP rs1514173 chr1 74995110 Intron 6 3466 CEU:0.919;0.844 FUNCTIONAL_SNP rs3843262 chr1 75013054 Intergenic 6 21410 CEU:0.917;0.808 FUNCTIONAL_SNP rs6604867 chr1 74992278 Intron 6 634 CEU:1.0;0.961 FUNCTIONAL_SNP rs1040070 chr1 74977870 Intron 6 13774 CEU:1.0;0.961 FUNCTIONAL_SNP rs6604871 chr1 75008008 Intron 6 16364 CEU:0.919;0.844 FUNCTIONAL_SNP rs953567 chr1 74977425 Intron 6 14219 CEU:0.955;0.873 FUNCTIONAL_SNP rs3845347 chr1 75004048 Intron 6 12404 CEU:1.0;0.923 FUNCTIONAL_SNP rs10890130 chr1 75004875 Intron 6 13231 CEU:0.919;0.844 FUNCTIONAL_SNP rs6698622 chr1 74997956 Intron 6 6312 CEU:0.919;0.844 FUNCTIONAL_SNP rs6669189 chr1 75011358 Intergenic 7 19714 CEU:0.917;0.841 FUNCTIONAL_SNP rs7553158 chr1 75005238 Intron 7 13594 CEU:1.0;0.923 FUNCTIONAL_SNP rs7520945 chr1 75004943 Intron 7 13299 CEU:1.0;0.923 FUNCTIONAL_SNP rs6690871 chr1 74977277 Intron 7 14367 CEU:1.0;0.96 FUNCTIONAL_SNP rs12041912 chr1 75003710 Intron 7 12066 CEU:1.0;0.922 FUNCTIONAL_SNP rs2344508 chr1 74999713 Intron 7 8069 CEU:1.0;0.923 FUNCTIONAL_SNP rs1514176 chr1 74991596 Intron 7 48 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1514177 chr1 74991402 Intron 7 242 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.713 FUNCTIONAL_SNP rs3894212 chr1 75001683 Intron 7 10039 CEU:0.919;0.844 FUNCTIONAL_SNP rs6604872 chr1 75004611 Intron 7 12967 CEU:1.0;0.923 FUNCTIONAL_SNP rs12566985 chr1 75002193 Intron 7 10549 CEU:1.0;0.923 FUNCTIONAL_SNP rs7514705 chr1 75006720 Intron 7 15076 CEU:1.0;0.923 FUNCTIONAL_SNP rs3895907 chr1 75006027 Intron 7 14383 CEU:1.0;0.923 FUNCTIONAL_SNP rs3845344 chr1 75001480 Intron 7 9836 CEU:0.958;0.882, CHB:1.0;0.601 FUNCTIONAL_SNP rs10493544 chr1 74983835 Intron 7 7809 CEU:1.0;0.961 FUNCTIONAL_SNP rs7526762 chr1 74993318 Intron 7 1674 CEU:1.0;0.959 FUNCTIONAL_SNP rs10218727 chr1 75012637 Intergenic 7 20993 CEU:0.918;0.842 FUNCTIONAL_SNP rs1514174 chr1 74993063 Intron 7 1419 CEU:1.0;0.961 FUNCTIONAL_SNP rs12036473 chr1 74979975 Intron 7 11669 CEU:1.0;0.922 FUNCTIONAL_SNP rs12041852 chr1 75003500 Intron 7 11856 CEU:1.0;0.923 LEAD_SNP rs1857353 chr1 75913826 Intron 5b ASSOCIATION 21116278 MRI atrophy measures 5.69897000434 SLC44A5 FUNCTIONAL_SNP rs17584320 chr1 75879593 Intron 5a 34233 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12408190 chr1 75889179 Intron 5a 24647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12401896 chr1 75907626 Intron 6 6200 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs1913118 chr1 75886670 Intron 6 27156 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4540592 chr1 75883281 Intron 6 30545 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1857354 chr1 75902948 Intron 6 10878 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4949855 chr1 75917162 Intron 6 3336 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs1936359 chr1 75891016 Intron 6 22810 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12405357 chr1 75861616 Intron 6 52210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2040079 chr1 75906421 Intron 7 7405 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs2040082 chr1 75906874 Intron 7 6952 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12411159 chr1 75840172 Intron 7 73654 CEU:1.0;0.898, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs983331 chr1 75880565 Intron 7 33261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10493575 chr1 75903516 Intron 7 10310 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12410333 chr1 75895626 Intron 7 18200 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17644957 chr1 75877394 Intron 7 36432 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12408827 chr1 75823198 Intron 7 90628 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;0.741 LEAD_SNP rs211718 chr1 76106675 Intergenic 6 ASSOCIATION 20037589 Serum metabolites 63.0 RPL29P5 - ACADM FUNCTIONAL_SNP rs3818855 chr1 76198785 Coding 5b 92110 CEU:1.0;0.96, CHB:1.0;1.0 FUNCTIONAL_SNP rs1251079 chr1 76189445 Exon,non-coding 5a 82770 CEU:1.0;0.921 FUNCTIONAL_SNP rs12136754 chr1 76230232 Intergenic 2b 123557 CEU:1.0;0.96, CHB:1.0;1.0 FUNCTIONAL_SNP rs4949875 chr1 76173080 Intergenic 4 66405 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2173378 chr1 76201992 Intron 4 95317 CEU:1.0;0.96, CHB:1.0;1.0 FUNCTIONAL_SNP rs1251078 chr1 76189488 Intron 5a 82813 CEU:1.0;0.921 FUNCTIONAL_SNP rs942270 chr1 76177332 Intron 5a 70657 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs4949876 chr1 76173377 Intergenic 5a 66702 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7524467 chr1 76194054 Intron 5b 87379 CEU:1.0;1.0, CHB:1.0;1.0, YRI:0.851;0.725 FUNCTIONAL_SNP rs4949874 chr1 76161889 Intergenic 5b 55214 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11161511 chr1 76210477 Intron 5b 103802 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs2275378 chr1 76198436 Intron 5b 91761 CEU:1.0;0.96, CHB:1.0;1.0 FUNCTIONAL_SNP rs11161510 chr1 76210289 Intron 5b 103614 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs11163924 chr1 76132070 Intergenic 6 25395 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1767458 chr1 76219155 Intron 6 112480 CEU:0.957;0.879, CHB:1.0;1.0 FUNCTIONAL_SNP rs7533888 chr1 76160449 Intergenic 6 53774 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7518038 chr1 76154430 Intergenic 6 47755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs1694419 chr1 76219801 Intron 6 113126 CEU:1.0;0.96, CHB:1.0;1.0 FUNCTIONAL_SNP rs7513559 chr1 76173744 Intergenic 7 67069 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7516226 chr1 76234257 Intergenic 7 127582 CEU:1.0;0.953, CHB:1.0;0.74, YRI:0.922;0.85 FUNCTIONAL_SNP rs12123977 chr1 76209754 Intron 7 103079 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs2066183 chr1 76153745 Intergenic 7 47070 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7552404 chr1 76135946 Intergenic 7 29271 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11161493 chr1 76206254 Intron 7 99579 CEU:1.0;0.959, CHB:1.0;1.0 FUNCTIONAL_SNP rs4646961 chr1 76217169 Intron 7 110494 CEU:1.0;0.96, CHB:1.0;0.741, YRI:0.927;0.859 FUNCTIONAL_SNP rs7544117 chr1 76158246 Intergenic 7 51571 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1612097 chr1 76218875 Intron 7 112200 CEU:1.0;0.96, CHB:1.0;1.0 FUNCTIONAL_SNP rs12134854 chr1 76137606 Intergenic 7 30931 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.55 FUNCTIONAL_SNP rs7534754 chr1 76185308 Intron 7 78633 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs1498315 chr1 76159225 Intergenic 7 52550 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1146574 chr1 76202671 Intron 7 95996 CEU:1.0;0.956, CHB:1.0;1.0 FUNCTIONAL_SNP rs1146579 chr1 76209792 Intron 7 103117 CEU:1.0;0.96, CHB:1.0;1.0 FUNCTIONAL_SNP rs1146581 chr1 76213024 Intron 7 106349 CEU:0.957;0.878, CHB:1.0;1.0 FUNCTIONAL_SNP rs11161521 chr1 76216330 Intron 7 109655 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs1146588 chr1 76229787 Intergenic 7 123112 CEU:1.0;0.96, CHB:1.0;1.0 FUNCTIONAL_SNP rs1858536 chr1 76161595 Intergenic 7 54920 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4949872 chr1 76131392 Intergenic 7 24717 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7535991 chr1 76162624 Intergenic 7 55949 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17587071 chr1 76225083 Intron 7 118408 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12753569 chr1 76484014 Intron 4 ASSOCIATION 20691247 Personality dimensions 5.09691001301 ASB17 - ST6GALNAC3 LEAD_SNP rs10873876 chr1 76772328 Intron 6 ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 5.39794000867 ST6GALNAC3 FUNCTIONAL_SNP rs10782611 chr1 76771927 Intron 6 401 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs10873875 chr1 76772075 Intron 6 253 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4511169 chr1 76772996 Intron 6 668 CEU:1.0;0.879 FUNCTIONAL_SNP rs6701166 chr1 76771114 Intron 7 1214 CEU:1.0;1.0, CHB:1.0;0.892, JPT:1.0;0.731 FUNCTIONAL_SNP rs3903914 chr1 76771050 Intron 7 1278 CEU:1.0;1.0, CHB:1.0;0.892, JPT:1.0;0.731 LEAD_SNP rs7533906 chr1 80134123 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.39794000867 ADH5P2 - COX6A1P1 FUNCTIONAL_SNP rs6698618 chr1 80129920 Intergenic 5b 4203 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs12405015 chr1 80137178 Intergenic 6 3055 CEU:0.922;0.85, CHB:1.0;0.945, JPT:0.945;0.893, YRI:1.0;0.78 FUNCTIONAL_SNP rs10493651 chr1 80133186 Intergenic 6 937 CEU:1.0;0.943 FUNCTIONAL_SNP rs12405647 chr1 80144704 Intergenic 7 10581 CEU:0.941;0.837, CHB:1.0;1.0, JPT:1.0;0.739, YRI:1.0;0.675 FUNCTIONAL_SNP rs12128027 chr1 80117627 Intergenic 7 16496 CEU:1.0;0.943, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs11162780 chr1 80135445 Intergenic 7 1322 CEU:0.941;0.837, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.718 FUNCTIONAL_SNP rs11162781 chr1 80136780 Intergenic 7 2657 CEU:0.938;0.828 FUNCTIONAL_SNP rs4650425 chr1 80117634 Intergenic 7 16489 CEU:1.0;0.943, JPT:1.0;0.531 LEAD_SNP rs12024204 chr1 80243001 Intergenic 7 ASSOCIATION 21151130 Endometriosis 5.22184874962 ADH5P2 - COX6A1P1 FUNCTIONAL_SNP rs12027689 chr1 80243624 Intergenic 4 623 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6424674 chr1 80274846 Intergenic 5a 31845 CEU:1.0;1.0 FUNCTIONAL_SNP rs1546766 chr1 80257454 Intergenic 5b 14453 CEU:1.0;1.0 FUNCTIONAL_SNP rs7540219 chr1 80308950 Intergenic 5b 65949 CEU:0.959;0.883, CHB:0.934;0.7 FUNCTIONAL_SNP rs11162824 chr1 80251200 Intergenic 6 8199 CEU:1.0;1.0, YRI:1.0;0.693 FUNCTIONAL_SNP rs10493644 chr1 80283688 Intergenic 6 40687 CEU:1.0;0.961, CHB:1.0;0.849, JPT:0.928;0.862 FUNCTIONAL_SNP rs1866269 chr1 80288606 Intergenic 7 45605 CEU:1.0;0.92 FUNCTIONAL_SNP rs12120609 chr1 80306108 Intergenic 7 63107 CEU:0.96;0.886, CHB:0.934;0.7 FUNCTIONAL_SNP rs17425287 chr1 80286411 Intergenic 7 43410 CEU:1.0;1.0, CHB:1.0;0.849 FUNCTIONAL_SNP rs11162830 chr1 80289838 Intergenic 7 46837 CEU:1.0;0.923 FUNCTIONAL_SNP rs10874078 chr1 80289217 Intergenic 7 46216 CEU:1.0;0.925 FUNCTIONAL_SNP rs7519871 chr1 80245035 Intergenic 7 2034 CEU:1.0;1.0, YRI:1.0;0.887 LEAD_SNP rs11163585 chr1 83311835 Intergenic 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.04575749056 LPHN2 - TTLL7 FUNCTIONAL_SNP rs17508330 chr1 83313938 Intergenic 4 2103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17462698 chr1 83348951 Intergenic 5a 37116 CEU:0.954;0.871 FUNCTIONAL_SNP rs12132310 chr1 83306575 Intergenic 5a 5260 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11807671 chr1 83445765 Intron 5b 133930 CEU:0.91;0.828 FUNCTIONAL_SNP rs1144267 chr1 83395322 Intron 5b 83487 CEU:1.0;0.837 FUNCTIONAL_SNP rs10874347 chr1 83448667 Intron 5b 136832 CEU:0.91;0.828 FUNCTIONAL_SNP rs10874348 chr1 83448725 Intron 5b 136890 CEU:0.902;0.814 FUNCTIONAL_SNP rs12138548 chr1 83325805 Intergenic 6 13970 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs6695518 chr1 83317777 Intergenic 6 5942 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6685376 chr1 83314851 Intergenic 6 3016 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11163597 chr1 83346858 Intergenic 6 35023 CEU:0.954;0.871, JPT:1.0;1.0 FUNCTIONAL_SNP rs12120861 chr1 83348041 Intergenic 6 36206 CEU:0.954;0.871, JPT:1.0;1.0 FUNCTIONAL_SNP rs12139396 chr1 83311014 Intergenic 6 821 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12407742 chr1 83320177 Intergenic 6 8342 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs11808757 chr1 83395728 Intron 6 83893 CEU:0.954;0.871 FUNCTIONAL_SNP rs1561596 chr1 83435041 Intron 6 123206 CEU:0.91;0.828 FUNCTIONAL_SNP rs1146366 chr1 83358442 Intergenic 6 46607 CEU:0.954;0.871 FUNCTIONAL_SNP rs501760 chr1 83354737 Intergenic 7 42902 CEU:0.953;0.869 FUNCTIONAL_SNP rs11800115 chr1 83415346 Intron 7 103511 CEU:0.949;0.858, JPT:1.0;1.0 FUNCTIONAL_SNP rs7518844 chr1 83443933 Intron 7 132098 CEU:0.91;0.828 FUNCTIONAL_SNP rs1371814 chr1 83419460 Intron 7 107625 CEU:0.954;0.871 FUNCTIONAL_SNP rs12134259 chr1 83452506 Intron 7 140671 CEU:0.91;0.828 FUNCTIONAL_SNP rs11587806 chr1 83318512 Intergenic 7 6677 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6691586 chr1 83322217 Intergenic 7 10382 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs10874345 chr1 83320362 Intergenic 7 8527 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12134816 chr1 83444625 Intron 7 132790 CEU:0.943;0.842 FUNCTIONAL_SNP rs12131747 chr1 83418227 Intron 7 106392 CEU:0.951;0.862 FUNCTIONAL_SNP rs2146728 chr1 83435366 Intron 7 123531 CEU:0.896;0.803, JPT:1.0;1.0 FUNCTIONAL_SNP rs11163586 chr1 83315334 Intergenic 7 3499 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11163588 chr1 83322696 Intergenic 7 10861 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1146367 chr1 83358781 Intergenic 7 46946 CEU:0.954;0.871 FUNCTIONAL_SNP rs11163616 chr1 83407444 Intron 7 95609 CEU:0.953;0.867, CHB:1.0;1.0 FUNCTIONAL_SNP rs3910625 chr1 83360360 Intergenic 7 48525 CEU:0.954;0.871 FUNCTIONAL_SNP rs6671855 chr1 83449423 Intron 7 137588 CEU:0.91;0.828 LEAD_SNP rs7552393 chr1 84254551 Intron 5b ASSOCIATION 17903293 Select biomarker traits 6.30102999566 LPHN2 - TTLL7 LEAD_SNP rs7539409 chr1 84254735 Intron 7 ASSOCIATION term=200 Alzheimer's disease 6.0 LPHN2 - TTLL7 LEAD_SNP rs1085093 chr1 84761348 Intergenic 6 ASSOCIATION 20694148 Metabolic syndrome 5.52287874528 PRKACB - SAMD13 LEAD_SNP rs1983853 chr1 85311192 Intron 6 ASSOCIATION 18840781 Type 1 diabetes 5.69897000434 LPAR3 LEAD_SNP rs7553864 chr1 87613358 Intron 7 ASSOCIATION 19247474 Smoking behavior 5.52287874528 HS2ST1 - LMO4 LEAD_SNP rs6576878 chr1 87705031 Intergenic 7 ASSOCIATION 21738478 White blood cell types 5.22184874962 HS2ST1 - LMO4 LEAD_SNP rs983332 chr1 88132380 Intergenic 6 ASSOCIATION 18615156 Response to TNF antagonist treatment 5.30102999566 LMO4 - RPL36AP10 FUNCTIONAL_SNP rs17130101 chr1 88143461 Intergenic 7 11081 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.918 LEAD_SNP rs2179965 chr1 88802012 Intergenic 6 ASSOCIATION 17903297 Cognitive test performance 6.0 LMO4 - RPL36AP10 FUNCTIONAL_SNP rs6682490 chr1 88825290 Intergenic 6 23278 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12749687 chr1 88803250 Intergenic 7 1238 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2136093 chr1 90875888 Intergenic 7 ASSOCIATION 20360315 Response to antidepressants 6.39794000867 ZNF326 - BARHL2 FUNCTIONAL_SNP rs7522605 chr1 90894538 Intergenic 6 18650 CEU:1.0;1.0, CHB:1.0;0.718, JPT:1.0;0.867, YRI:0.914;0.69 FUNCTIONAL_SNP rs2136094 chr1 90925982 Intergenic 6 50094 CEU:1.0;0.911 FUNCTIONAL_SNP rs6701608 chr1 90869227 Intergenic 6 6661 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10218464 chr1 90866978 Intergenic 6 8910 CEU:1.0;0.914, CHB:1.0;0.915, JPT:1.0;1.0, YRI:0.959;0.884 FUNCTIONAL_SNP rs506368 chr1 90920022 Intergenic 7 44134 CEU:1.0;1.0, CHB:1.0;0.722, JPT:0.849;0.721, YRI:0.909;0.704 FUNCTIONAL_SNP rs1027854 chr1 90915627 Intergenic 7 39739 CEU:1.0;1.0 FUNCTIONAL_SNP rs1337576 chr1 90916072 Intergenic 7 40184 CEU:1.0;0.955 FUNCTIONAL_SNP rs1472887 chr1 90879608 Intergenic 7 3720 CEU:1.0;1.0, CHB:1.0;0.915, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2390582 chr1 90943907 Intergenic 6 ASSOCIATION 17903303 Coronary artery calcification 6.0 ZNF326 - BARHL2 LEAD_SNP rs164898 chr1 91569689 Intergenic 4 ASSOCIATION 20694148 Metabolic syndrome 5.22184874962 RPL5P6 - HFM1 FUNCTIONAL_SNP rs164899 chr1 91569730 Intergenic 4 41 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs56478 chr1 91570165 Intergenic 5b 476 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1192415 chr1 92077097 Intergenic 4 ASSOCIATION 21307088 Optic disc parameters 16.096910013 RPL39P13 - HSP90B3P ASSOCIATION 20548946 Optic disc parameters 27.5228787453 RPL39P13 - HSP90B3P ASSOCIATION 20395239 Optic disc size (disc) 6.52287874528 RPL39P13 - HSP90B3P FUNCTIONAL_SNP rs10874794 chr1 92045585 Intergenic 4 31512 CEU:0.943;0.841 FUNCTIONAL_SNP rs4658101 chr1 92077409 Intergenic 4 312 CEU:1.0;1.0 FUNCTIONAL_SNP rs1192414 chr1 92075134 Intergenic 4 1963 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.867;0.626 FUNCTIONAL_SNP rs12117800 chr1 92049014 Intergenic 4 28083 CEU:0.943;0.841 FUNCTIONAL_SNP rs11800345 chr1 92050101 Intergenic 5a 26996 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs10493852 chr1 92041515 Intergenic 5b 35582 CEU:1.0;0.945, CHB:0.811;0.602, JPT:1.0;0.92 FUNCTIONAL_SNP rs4658236 chr1 92057446 Intergenic 5b 19651 CEU:0.943;0.841 FUNCTIONAL_SNP rs11165013 chr1 92051419 Intergenic 6 25678 CEU:0.943;0.841 FUNCTIONAL_SNP rs906633 chr1 92047004 Intergenic 7 30093 CEU:0.943;0.841 FUNCTIONAL_SNP rs11164978 chr1 92043661 Intergenic 7 33436 CEU:0.94;0.834 FUNCTIONAL_SNP rs1192404 chr1 92068967 Intergenic 7 8130 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs1192419 chr1 92080059 Intergenic 7 2962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.718 LEAD_SNP rs17131547 chr1 92211020 Intron 4 ASSOCIATION 19249006 Bone mineral density 6.0 TGFBR3 LEAD_SNP rs6604026 chr1 93303603 Exon,non-coding 5b ASSOCIATION 19525955 Multiple sclerosis 5.52287874528 RPL5 ASSOCIATION 17660530 Multiple sclerosis 5.09691001301 RPL5 FUNCTIONAL_SNP rs1854797 chr1 93298756 Exon,non-coding 5b 4847 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2893226 chr1 93288437 Intergenic 4 15166 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.78;0.524 FUNCTIONAL_SNP rs12738964 chr1 93274450 Intergenic 4 29153 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11586570 chr1 93305371 Intron 5b 1768 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs34244251 chr1 93297180 Intergenic 5b 6423 CEU:0.946;0.849, CHB:1.0;1.0 FUNCTIONAL_SNP rs12728322 chr1 93294792 Intergenic 6 8811 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7521417 chr1 93377835 Intron 6 74232 CEU:1.0;0.896, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11164820 chr1 93280788 Intergenic 7 22815 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7514280 chr1 93320869 Intron 7 17266 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.691 FUNCTIONAL_SNP rs35183060 chr1 93346928 Intron 7 43325 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs12745968 chr1 93401837 Intron 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.09691001301 FAM69A FUNCTIONAL_SNP rs10874744 chr1 93306317 Exon,non-coding 4 95520 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2774949 chr1 93352553 Intron 2a 49284 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.658 FUNCTIONAL_SNP rs10782946 chr1 93352669 Intron 2b 49168 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7542608 chr1 93401194 Intron 2b 643 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10782945 chr1 93304272 Intron 3a 97565 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11164843 chr1 93416142 Intron 4 14305 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs11164844 chr1 93416650 Intron 4 14813 CEU:0.956;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11164845 chr1 93416685 Intron 4 14848 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs6604030 chr1 93398336 Intron 4 3501 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4847378 chr1 93324634 Intron 4 77203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.952;0.619 FUNCTIONAL_SNP rs10874747 chr1 93352491 Intron 4 49346 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7550347 chr1 93401157 Intron 4 680 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6666223 chr1 93466062 Intergenic 4 64225 CEU:1.0;0.917 FUNCTIONAL_SNP rs2481713 chr1 93354889 Intron 5a 46948 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs7515257 chr1 93393718 Intron 5a 8119 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2811594 chr1 93343282 Intron 5a 58555 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.815 FUNCTIONAL_SNP rs10874753 chr1 93429087 Intergenic 5a 27250 CEU:1.0;0.917, JPT:1.0;0.659 FUNCTIONAL_SNP rs12081675 chr1 93461495 Intergenic 5b 59658 CEU:1.0;0.917 FUNCTIONAL_SNP rs2391177 chr1 93353943 Intron 5b 47894 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs12060952 chr1 93381273 Intron 5b 20564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs949915 chr1 93369774 Intron 5b 32063 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs11164836 chr1 93381415 Intron 5b 20422 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs9439948 chr1 93370800 Intron 5b 31037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs6604031 chr1 93400766 Intron 5b 1071 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.657 FUNCTIONAL_SNP rs12066638 chr1 93375391 Intron 5b 26446 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs7536563 chr1 93349046 Intron 5b 52791 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2481712 chr1 93351477 Intron 6 50360 CEU:0.956;0.913, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs12074608 chr1 93411781 Intron 6 9944 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs2811593 chr1 93343891 Intron 6 57946 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs2263247 chr1 93364067 Intron 6 37770 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs6604029 chr1 93394125 Intron 6 7712 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10874751 chr1 93384540 Intron 6 17297 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs10493863 chr1 93399694 Intron 6 2143 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17380789 chr1 93387519 Intron 6 14318 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs1360366 chr1 93330987 Intron 6 70850 CEU:1.0;0.957, CHB:1.0;0.79, JPT:1.0;0.741 FUNCTIONAL_SNP rs11583491 chr1 93463949 Intergenic 7 62112 CEU:1.0;0.917 FUNCTIONAL_SNP rs17380908 chr1 93402551 Intron 7 714 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2481710 chr1 93337494 Intron 7 64343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.851 FUNCTIONAL_SNP rs9651257 chr1 93385136 Intron 7 16701 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs11164835 chr1 93379093 Intron 7 22744 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs2811600 chr1 93334138 Intron 7 67699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs12059883 chr1 93381108 Intron 7 20729 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs6698233 chr1 93397300 Intron 7 4537 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs6604028 chr1 93378033 Intron 7 23804 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs4847384 chr1 93382279 Intron 7 19558 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2255717 chr1 93368500 Intron 7 33337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.886 FUNCTIONAL_SNP rs2255723 chr1 93368309 Intron 7 33528 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 FUNCTIONAL_SNP rs7417198 chr1 93391445 Intron 7 10392 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10874746 chr1 93323971 Intron 7 77866 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2774953 chr1 93355254 Intron 7 46583 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.851 FUNCTIONAL_SNP rs2774956 chr1 93364726 Intron 7 37111 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659 LEAD_SNP rs17110736 chr1 94462769 Intron 7 ASSOCIATION 21546767 Dialysis-related mortality 5.30102999566 ABCA4 LEAD_SNP rs2774920 chr1 94611300 Intergenic 7 ASSOCIATION 21502573 D-dimer levels 6.0 ABCA4 - ARHGAP29 FUNCTIONAL_SNP rs871661 chr1 94608893 Intergenic 4 2407 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.933, YRI:0.804;0.544 FUNCTIONAL_SNP rs12075780 chr1 94609246 Intergenic 5b 2054 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.933 FUNCTIONAL_SNP rs17111161 chr1 94610395 Intergenic 7 905 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.933 LEAD_SNP rs12029080 chr1 95053353 Intron 5a ASSOCIATION 21502573 D-dimer levels 51.2218487496 F3 - SLC44A3 FUNCTIONAL_SNP rs2022030 chr1 95052032 Exon,non-coding 4 1321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs2022309 chr1 95052476 Intron 7 877 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.7 FUNCTIONAL_SNP rs12128453 chr1 95049856 Intergenic 7 3497 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1414896 chr1 95692310 Intron 6 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (AST) 5.69897000434 TMEM56 - RWDD3 LEAD_SNP rs6693882 chr1 96145968 Intergenic 7 ASSOCIATION 19207018 Pain 5.69897000434 RWDD3 - EEF1A1P11 FUNCTIONAL_SNP rs1509181 chr1 96146782 Intergenic 6 814 CEU:1.0;0.854, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1973993 chr1 96943994 Intergenic 6 ASSOCIATION 19079260 Weight 6.0 EEF1A1P11 - RPL7P9 LEAD_SNP rs1555543 chr1 96944797 Intergenic 7 ASSOCIATION 20935630 Body mass index 9.39794000867 EEF1A1P11 - RPL7P9 FUNCTIONAL_SNP rs10489741 chr1 96942406 Intergenic 6 2391 CEU:1.0;0.924, CHB:1.0;0.91, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1973993 chr1 96943994 Intergenic 6 803 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs588660 chr1 96886604 Intergenic 6 58193 CEU:1.0;1.0, CHB:1.0;0.502, YRI:0.844;0.618 FUNCTIONAL_SNP rs2181375 chr1 96940119 Intergenic 6 4678 CEU:0.919;0.812 FUNCTIONAL_SNP rs11165643 chr1 96924097 Intergenic 7 20700 CEU:1.0;1.0 LEAD_SNP rs10783050 chr1 97037083 Intergenic 7 ASSOCIATION 19079260 Body mass index 5.39794000867 EEF1A1P11 - RPL7P9 LEAD_SNP rs7544736 chr1 97164343 Intergenic 4 ASSOCIATION 19571811 Schizophrenia 6.22184874962 RPL7P9 - PTBP2 FUNCTIONAL_SNP rs6699932 chr1 97272456 Coding 6 108113 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7525442 chr1 97168870 Intergenic 2b 4527 CEU:0.914;0.836, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3791010 chr1 97262716 Intron 5a 98373 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.686 FUNCTIONAL_SNP rs12073730 chr1 97172454 Intergenic 5b 8111 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs10875029 chr1 97178241 Intergenic 5b 13898 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10875035 chr1 97284496 Intergenic 5b 120153 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs12075245 chr1 97238705 Intron 5b 74362 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10875031 chr1 97196678 Intron 6 32335 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.681 FUNCTIONAL_SNP rs6666522 chr1 97220357 Intron 6 56014 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.686 FUNCTIONAL_SNP rs10875034 chr1 97283033 Intergenic 6 118690 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs1409057 chr1 97146954 Intergenic 6 17389 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;0.781 FUNCTIONAL_SNP rs11165690 chr1 97113731 Intergenic 6 50612 CEU:1.0;0.939, CHB:1.0;0.924, JPT:1.0;0.781 FUNCTIONAL_SNP rs12032101 chr1 97148733 Intergenic 6 15610 CEU:1.0;0.938, CHB:1.0;0.919, JPT:1.0;1.0 FUNCTIONAL_SNP rs12071951 chr1 97113915 Intergenic 7 50428 CEU:1.0;0.939, CHB:1.0;0.924, JPT:1.0;0.781 FUNCTIONAL_SNP rs12031128 chr1 97165566 Intergenic 7 1223 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.529 FUNCTIONAL_SNP rs3791004 chr1 97276300 Intron 7 111957 CEU:0.932;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12083632 chr1 97249952 Intron 7 85609 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1496116 chr1 97152559 Intergenic 7 11784 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1591865 chr1 97177244 Intergenic 7 12901 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1591866 chr1 97177209 Intergenic 7 12866 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10489797 chr1 97245200 Intron 7 80857 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;0.686 FUNCTIONAL_SNP rs6682850 chr1 97135440 Intergenic 7 28903 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;0.781 FUNCTIONAL_SNP rs6699242 chr1 97258468 Intron 7 94125 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12354163 chr1 97233708 Intron 7 69365 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.686 FUNCTIONAL_SNP rs12024617 chr1 97148579 Intergenic 7 15764 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;0.781 FUNCTIONAL_SNP rs1575800 chr1 97136782 Intergenic 7 27561 CEU:1.0;0.932, CHB:1.0;1.0, JPT:1.0;0.781 FUNCTIONAL_SNP rs7517818 chr1 97141695 Intergenic 7 22648 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;0.78, YRI:0.908;0.611 FUNCTIONAL_SNP rs7540478 chr1 97233165 Intron 7 68822 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.686 LEAD_SNP rs11165846 chr1 97819667 Intron 7 ASSOCIATION 21507922 Platelet counts 5.04575749056 DPYD LEAD_SNP rs7543130 chr1 100049785 Intergenic 5a ASSOCIATION 19584346 Aortic root size 7.0 LPPR4 - PALMD FUNCTIONAL_SNP rs6702619 chr1 100046246 Intergenic 4 3539 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11166276 chr1 100045239 Intergenic 5a 4546 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7543039 chr1 100049648 Intergenic 5a 137 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1890753 chr1 100039519 Intergenic 5b 10266 CEU:0.96;0.885, CHB:1.0;0.642, YRI:1.0;0.704 LEAD_SNP rs17410015 chr1 101551926 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 5.69897000434 DPH5 - S1PR1 FUNCTIONAL_SNP rs17410029 chr1 101551968 Intron 7 42 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1948368 chr1 101938477 Intergenic 7 ASSOCIATION 18711365 Bipolar disorder 5.22184874962 PPIAP7 - RPSAP19 FUNCTIONAL_SNP rs1777894 chr1 101940809 Intergenic 6 2332 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1777867 chr1 101937782 Intergenic 7 695 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs1419103 chr1 101940656 Intergenic 7 2179 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs726646 chr1 101938663 Intergenic 7 186 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10874639 chr1 103133909 Intergenic 7 ASSOCIATION 18464913 Protein quantitative trait loci 5.52287874528 HEJ1 - COL11A1 FUNCTIONAL_SNP rs12084692 chr1 103142701 Intergenic 5b 8792 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11164570 chr1 103144370 Intergenic 6 10461 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7550400 chr1 103152697 Intergenic 7 18788 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;0.875, YRI:1.0;1.0 LEAD_SNP rs12726652 chr1 107432576 Intergenic 7 ASSOCIATION 21107309 Working memory 6.30102999566 CDK4PS - PRMT6 LEAD_SNP rs4118325 chr1 107577832 Intergenic 6 ASSOCIATION 19754311 AIDS 6.22184874962 CDK4PS - PRMT6 FUNCTIONAL_SNP rs3791185 chr1 107600869 Exon,non-coding 4 23037 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs11185043 chr1 107560292 Intergenic 3a 17540 CEU:1.0;0.951, CHB:1.0;0.916, JPT:1.0;1.0, YRI:0.937;0.592 FUNCTIONAL_SNP rs11185042 chr1 107559559 Intergenic 4 18273 CEU:1.0;0.951, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs12729458 chr1 107553468 Intergenic 4 24364 CEU:1.0;0.951, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs10047147 chr1 107561147 Intergenic 5a 16685 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10881455 chr1 107561546 Intergenic 5a 16286 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12021578 chr1 107597501 Intergenic 5a 19669 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs6673500 chr1 107551549 Intergenic 5a 26283 CEU:1.0;0.95, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs11185046 chr1 107561258 Intergenic 5a 16574 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10218457 chr1 107571244 Intergenic 5b 6588 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.749 FUNCTIONAL_SNP rs10218458 chr1 107571327 Intergenic 5b 6505 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4118320 chr1 107564449 Intergenic 5b 13383 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.637 FUNCTIONAL_SNP rs11185057 chr1 107596964 Intergenic 5b 19132 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:0.931;0.521 FUNCTIONAL_SNP rs6689110 chr1 107552068 Intergenic 5b 25764 CEU:1.0;0.951, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs4096996 chr1 107564415 Intergenic 5b 13417 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11185041 chr1 107559350 Intergenic 5b 18482 CEU:1.0;0.951, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs3903927 chr1 107542227 Intergenic 6 35605 CEU:1.0;0.95, CHB:0.908;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs11185038 chr1 107558043 Intergenic 6 19789 CEU:1.0;0.951, CHB:1.0;0.915, JPT:1.0;1.0 FUNCTIONAL_SNP rs10785814 chr1 107610540 Intergenic 6 32708 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs12740707 chr1 107554563 Intergenic 6 23269 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;1.0 FUNCTIONAL_SNP rs11185051 chr1 107565856 Intergenic 6 11976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10458533 chr1 107560034 Intergenic 6 17798 CEU:1.0;0.951, CHB:1.0;0.916, JPT:1.0;1.0, YRI:0.937;0.592 FUNCTIONAL_SNP rs4118321 chr1 107569913 Intergenic 6 7919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12025549 chr1 107554671 Intergenic 6 23161 CEU:1.0;0.949, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs6659571 chr1 107568582 Intergenic 6 9250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.635 FUNCTIONAL_SNP rs12026889 chr1 107550576 Intergenic 7 27256 CEU:1.0;0.951, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs11578885 chr1 107556097 Intergenic 7 21735 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs11185037 chr1 107543055 Intergenic 7 34777 CEU:1.0;0.951, CHB:0.908;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs2878351 chr1 107548509 Intergenic 7 29323 CEU:1.0;0.951, CHB:0.908;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs11185045 chr1 107560639 Intergenic 7 17193 CEU:1.0;0.951, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs6684571 chr1 107623224 Intergenic 7 45392 CEU:1.0;1.0, CHB:0.814;0.663, JPT:1.0;1.0, YRI:0.931;0.521 FUNCTIONAL_SNP rs11185058 chr1 107603269 Intergenic 7 25437 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs7543089 chr1 107591693 Intergenic 7 13861 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs3128749 chr1 107564086 Intergenic 7 13746 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6699181 chr1 107557232 Intergenic 7 20600 CEU:1.0;0.951, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs4084428 chr1 107554421 Intergenic 7 23411 CEU:1.0;0.95, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs12026762 chr1 107550184 Intergenic 7 27648 CEU:1.0;0.951, CHB:1.0;0.843, JPT:1.0;1.0 FUNCTIONAL_SNP rs12032059 chr1 107558304 Intergenic 7 19528 CEU:1.0;0.951, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs10494056 chr1 107547919 Intergenic 7 29913 CEU:1.0;0.951, CHB:0.906;0.752, JPT:1.0;0.904 FUNCTIONAL_SNP rs10494057 chr1 107576399 Intergenic 7 1433 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;0.591 FUNCTIONAL_SNP rs6675948 chr1 107557477 Intergenic 7 20355 CEU:0.945;0.805, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs12026861 chr1 107556645 Intergenic 7 21187 CEU:1.0;0.951, CHB:1.0;0.91, JPT:1.0;1.0 FUNCTIONAL_SNP rs17018185 chr1 107579295 Intergenic 7 1463 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10494067 chr1 107830858 Intron 5a ASSOCIATION 21079607 Anorexia nervosa 5.22184874962 NTNG1 LEAD_SNP rs12740374 chr1 109817590 Exon,non-coding 4 ASSOCIATION 21347282 Coronary heart disease 28.0457574906 CELSR2 ASSOCIATION 19060906 LDL cholesterol 41.6989700043 CELSR2 FUNCTIONAL_SNP rs7528419 chr1 109817192 Exon,non-coding 4 398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.883 LEAD_SNP rs660240 chr1 109817838 Exon,non-coding 4 ASSOCIATION 20864672 LDL cholesterol 26.0 CELSR2 FUNCTIONAL_SNP rs7528419 chr1 109817192 Exon,non-coding 4 646 CEU:1.0;0.954, JPT:1.0;1.0, YRI:0.875;0.56 FUNCTIONAL_SNP rs629301 chr1 109818306 Exon,non-coding 4 468 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;0.846, YRI:1.0;1.0 FUNCTIONAL_SNP rs12740374 chr1 109817590 Exon,non-coding 4 248 CEU:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.637 FUNCTIONAL_SNP rs646776 chr1 109818530 Intergenic 4 692 CEU:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs599839 chr1 109822166 Intergenic 6 4328 CEU:1.0;0.833, CHB:1.0;0.659, JPT:1.0;0.846 FUNCTIONAL_SNP rs583104 chr1 109821307 Intergenic 7 3469 CEU:1.0;0.832, JPT:1.0;1.0 FUNCTIONAL_SNP rs602633 chr1 109821511 Intergenic 7 3673 CEU:1.0;0.866, JPT:1.0;1.0 LEAD_SNP rs629301 chr1 109818306 Exon,non-coding 4 ASSOCIATION 20686565 Blood lipid traits 170.0 CELSR2 FUNCTIONAL_SNP rs7528419 chr1 109817192 Exon,non-coding 4 1114 CEU:1.0;1.0, JPT:1.0;0.846, YRI:0.875;0.56 FUNCTIONAL_SNP rs660240 chr1 109817838 Exon,non-coding 4 468 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;0.846, YRI:1.0;1.0 FUNCTIONAL_SNP rs12740374 chr1 109817590 Exon,non-coding 4 716 CEU:1.0;1.0, JPT:1.0;0.846, YRI:1.0;0.637 FUNCTIONAL_SNP rs646776 chr1 109818530 Intergenic 4 224 CEU:1.0;1.0, JPT:1.0;0.846, YRI:1.0;0.954 FUNCTIONAL_SNP rs599839 chr1 109822166 Intergenic 6 3860 CEU:1.0;0.873, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs583104 chr1 109821307 Intergenic 7 3001 CEU:1.0;0.872, JPT:1.0;0.846 FUNCTIONAL_SNP rs602633 chr1 109821511 Intergenic 7 3205 CEU:0.95;0.82, JPT:1.0;0.822 LEAD_SNP rs646776 chr1 109818530 Intergenic 4 ASSOCIATION 21378988 Coronary heart disease 9.22184874962 CELSR2 ASSOCIATION 21087763 Progranulin levels 29.6989700043 CELSR2 ASSOCIATION 20339536 Response to statin therapy 5.39794000867 CELSR2 ASSOCIATION 19198609 Myocardial infarction (early onset) 11.096910013 CELSR2 ASSOCIATION 19060911 Cholesterol, total 21.0457574906 CELSR2 ASSOCIATION 19060911 LDL cholesterol 22.096910013 CELSR2 ASSOCIATION 19060910 LDL cholesterol 11.6989700043 CELSR2 ASSOCIATION 18193044 LDL cholesterol 28.5228787453 CELSR2 FUNCTIONAL_SNP rs7528419 chr1 109817192 Exon,non-coding 4 1338 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.873;0.532 FUNCTIONAL_SNP rs660240 chr1 109817838 Exon,non-coding 4 692 CEU:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs629301 chr1 109818306 Exon,non-coding 4 224 CEU:1.0;1.0, JPT:1.0;0.846, YRI:1.0;0.954 FUNCTIONAL_SNP rs12740374 chr1 109817590 Exon,non-coding 4 940 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.607 FUNCTIONAL_SNP rs599839 chr1 109822166 Intergenic 6 3636 CEU:1.0;0.873, JPT:1.0;0.846 FUNCTIONAL_SNP rs583104 chr1 109821307 Intergenic 7 2777 CEU:1.0;0.872, JPT:1.0;1.0 FUNCTIONAL_SNP rs602633 chr1 109821511 Intergenic 7 2981 CEU:0.95;0.82, JPT:1.0;1.0 LEAD_SNP rs599839 chr1 109822166 Intergenic 6 ASSOCIATION 21378990 Coronary heart disease 9.52287874528 PSRC1 ASSOCIATION 20442857 Lipoprotein-associated phospholipase A2 activity and mass 14.5228787453 PSRC1 ASSOCIATION 18262040 LDL cholesterol 33.0 PSRC1 ASSOCIATION 18193043 LDL cholesterol 32.2218487496 PSRC1 ASSOCIATION 18179892 LDL cholesterol 7.0 PSRC1 ASSOCIATION 17634449 Coronary heart disease 8.39794000867 PSRC1 FUNCTIONAL_SNP rs7528419 chr1 109817192 Exon,non-coding 4 4974 CEU:1.0;0.873, JPT:1.0;0.846 FUNCTIONAL_SNP rs660240 chr1 109817838 Exon,non-coding 4 4328 CEU:1.0;0.833, CHB:1.0;0.659, JPT:1.0;0.846 FUNCTIONAL_SNP rs629301 chr1 109818306 Exon,non-coding 4 3860 CEU:1.0;0.873, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs12740374 chr1 109817590 Exon,non-coding 4 4576 CEU:1.0;0.87, JPT:1.0;0.846 FUNCTIONAL_SNP rs646776 chr1 109818530 Intergenic 4 3636 CEU:1.0;0.873, JPT:1.0;0.846 FUNCTIONAL_SNP rs583104 chr1 109821307 Intergenic 7 859 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;0.846, YRI:1.0;1.0 FUNCTIONAL_SNP rs602633 chr1 109821511 Intergenic 7 655 CEU:1.0;0.955, CHB:1.0;0.658, JPT:1.0;0.822, YRI:1.0;1.0 LEAD_SNP rs1933182 chr1 109999838 Intergenic 6 ASSOCIATION 20383146 Chronic kidney disease 7.0 PSMA5 - SYPL2 FUNCTIONAL_SNP rs11142 chr1 109897103 Coding 5b 102735 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12145677 chr1 110023610 Exon,non-coding 7 23772 CEU:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.903 FUNCTIONAL_SNP rs3931560 chr1 109966718 Exon,non-coding 7 33120 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2781552 chr1 110025881 Intergenic 2b 26043 CEU:1.0;0.834, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.87 FUNCTIONAL_SNP rs4246517 chr1 110007636 Intergenic 2b 7798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9661614 chr1 110021837 Intron 4 21999 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10858091 chr1 109935578 Intron 4 64260 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3768493 chr1 109935505 Intron 4 64333 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3768494 chr1 109935427 Intron 4 64411 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs680434 chr1 109842271 Intron 4 157567 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs3853500 chr1 109864269 Intron 5a 135569 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3853501 chr1 109864374 Intron 5a 135464 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2152924 chr1 110011701 Intron 5a 11863 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs370088 chr1 109858119 Intron 5a 141719 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs638542 chr1 109845252 Intron 5b 154586 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.881 FUNCTIONAL_SNP rs10494040 chr1 110015732 Intron 5b 15894 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1880670 chr1 109941133 Intergenic 5b 58705 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10858086 chr1 109915075 Intron 5b 84763 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10858089 chr1 109926828 Intron 5b 73010 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1525916 chr1 110010949 Intron 5b 11111 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3768497 chr1 109866230 Intron 5b 133608 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs592107 chr1 109848726 Intron 5b 151112 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1465607 chr1 109958035 Intron 5b 41803 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10857787 chr1 110010289 Intron 5b 10451 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.506 FUNCTIONAL_SNP rs1030522 chr1 109900707 Intron 5b 99131 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3879448 chr1 109891423 Intron 6 108415 CEU:1.0;0.911, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6664236 chr1 109986672 Intergenic 6 13166 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4120621 chr1 109949008 Intron 6 50830 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6693932 chr1 110003575 Intergenic 6 3737 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10858084 chr1 109882250 Intron 6 117588 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10858092 chr1 109943893 Intergenic 6 55945 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3768496 chr1 109866569 Intron 6 133269 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7551176 chr1 109961965 Intron 6 37873 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4970767 chr1 110015183 Intron 6 15345 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs491285 chr1 110019002 Intron 6 19164 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs4603158 chr1 109879549 Intron 6 120289 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10127790 chr1 109891133 Intron 6 108705 CEU:0.954;0.801, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs10745352 chr1 109871787 Intron 7 128051 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10745353 chr1 109877506 Intron 7 122332 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10745354 chr1 109931908 Intron 7 67930 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3879449 chr1 109904971 Intron 7 94867 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3879450 chr1 109909149 Intron 7 90689 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4970759 chr1 109982213 Intergenic 7 17625 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6695482 chr1 109870859 Intron 7 128979 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs407102 chr1 109846278 Intron 7 153560 CEU:1.0;0.844 FUNCTIONAL_SNP rs10858085 chr1 109914983 Intron 7 84855 CEU:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs10858094 chr1 109950858 Intron 7 48980 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10858095 chr1 109962642 Intron 7 37196 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.922 FUNCTIONAL_SNP rs12136063 chr1 110014170 Intron 7 14332 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.571 FUNCTIONAL_SNP rs12073497 chr1 109974450 Intergenic 7 25388 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10776807 chr1 109956156 Intron 7 43682 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.903;0.815 FUNCTIONAL_SNP rs4970729 chr1 109979202 Intergenic 7 20636 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs11102974 chr1 109886371 Intron 7 113467 CEU:1.0;0.914, JPT:1.0;1.0 FUNCTIONAL_SNP rs4970751 chr1 109896600 Intron 7 103238 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4970752 chr1 109930852 Intron 7 68986 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs4970760 chr1 109985439 Intergenic 7 14399 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4970761 chr1 109995398 Intergenic 7 4440 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs4970766 chr1 110013955 Intron 7 14117 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7518013 chr1 109944078 Intergenic 7 55760 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs652651 chr1 109844532 Intron 7 155306 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs2303875 chr1 109955010 Intron 7 44828 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2039694 chr1 109991700 Intergenic 7 8138 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs443345 chr1 109849254 Intron 7 150584 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs444387 chr1 109851127 Intergenic 7 148711 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.91 LEAD_SNP rs12049330 chr1 110031188 Intron 4 ASSOCIATION 20125088 Major depressive disorder 5.22184874962 ATXN7L2 FUNCTIONAL_SNP rs12746776 chr1 109963318 Intron 7 67870 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12037569 chr1 109923677 Intron 7 107511 CEU:1.0;1.0, CHB:0.782;0.508, JPT:0.883;0.642 LEAD_SNP rs6537837 chr1 110119732 Intron 7 ASSOCIATION 20125088 Major depressive disorder 6.0 GNAI3 FUNCTIONAL_SNP rs2301229 chr1 110136678 Exon,non-coding 6 16946 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7371 chr1 110135308 Exon,non-coding 6 15576 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs3525 chr1 110136846 Exon,non-coding 7 17114 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2304355 chr1 110155524 Exon,non-coding 5a 35792 CEU:1.0;0.913 FUNCTIONAL_SNP rs1889470 chr1 110141421 Intergenic 4 21689 CEU:1.0;0.913, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs7355073 chr1 110129740 Intron 5a 10008 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs6682956 chr1 110130264 Intron 5a 10532 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12033376 chr1 110130641 Intron 5a 10909 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs17024195 chr1 110143755 Intron 5b 24023 CEU:1.0;0.913, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs3768486 chr1 110123971 Intron 5b 4239 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17595368 chr1 110154390 Intron 5b 34658 CEU:1.0;0.913 FUNCTIONAL_SNP rs11810577 chr1 110138109 Intergenic 6 18377 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0 FUNCTIONAL_SNP rs7537507 chr1 110131105 Intron 6 11373 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;0.733 FUNCTIONAL_SNP rs6658855 chr1 110123334 Intron 7 3602 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs6658641 chr1 110153198 Intron 7 33466 CEU:1.0;0.913 LEAD_SNP rs10494112 chr1 110352477 Intergenic 6 ASSOCIATION 21623375 Paget's disease 34.15490196 EPS8L3 - CSF1 FUNCTIONAL_SNP rs12742528 chr1 110351705 Intergenic 5b 772 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs3887891 chr1 110358890 Intergenic 5b 6413 CEU:1.0;0.921, CHB:1.0;1.0 LEAD_SNP rs484959 chr1 110366083 Intergenic 4 ASSOCIATION 20436471 Paget's disease 23.3010299957 EPS8L3 - CSF1 FUNCTIONAL_SNP rs500117 chr1 110361721 Intergenic 5a 4362 CEU:0.961;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs480419 chr1 110359882 Intergenic 6 6201 CEU:0.961;0.923, CHB:1.0;0.721, JPT:1.0;0.864 FUNCTIONAL_SNP rs520263 chr1 110355307 Intergenic 6 10776 CEU:0.948;0.899 LEAD_SNP rs958798 chr1 110770223 Intron 5b ASSOCIATION 20707712 Self-rated health 6.39794000867 KCNC4 LEAD_SNP rs12061304 chr1 111237685 Intergenic 7 ASSOCIATION 19165232 Panic disorder 6.0 KCNA3 - OR11I1P FUNCTIONAL_SNP rs7541840 chr1 111248683 Intergenic 5b 10998 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.826 FUNCTIONAL_SNP rs7521998 chr1 111245633 Intergenic 7 7948 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.953;0.868 FUNCTIONAL_SNP rs12085135 chr1 111243375 Intergenic 7 5690 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.953;0.868 FUNCTIONAL_SNP rs7532734 chr1 111246119 Intergenic 7 8434 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.861 FUNCTIONAL_SNP rs11102149 chr1 111240982 Intergenic 7 3297 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.912 LEAD_SNP rs494453 chr1 112192122 Intron 5b ASSOCIATION 20548944 Osteoporosis 7.39794000867 ADORA3 - RAP1A LEAD_SNP rs7555668 chr1 112856570 Intron 7 ASSOCIATION 20125193 Cognitive test performance 5.52287874528 KCND3 - AF357532 LEAD_SNP rs17030613 chr1 113190807 Intron 6 ASSOCIATION 21572416 Blood pressure 8.0 CAPZA1 ASSOCIATION 21572416 Blood pressure 5.09691001301 CAPZA1 FUNCTIONAL_SNP rs2273368 chr1 113063771 Exon,non-coding 6 127036 CEU:1.0;1.0, CHB:0.951;0.905, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs12122980 chr1 113157181 Intron 4 33626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3737136 chr1 113060432 Intron 5b 130375 CEU:1.0;0.941, CHB:0.952;0.907, JPT:0.946;0.812, YRI:1.0;1.0 FUNCTIONAL_SNP rs11102513 chr1 113160170 Intron 5b 30637 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11102514 chr1 113160419 Intron 5b 30388 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12130243 chr1 113169667 Intron 5b 21140 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12049572 chr1 113140583 Intron 6 50224 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs12756815 chr1 113207243 Intron 6 16436 CEU:1.0;0.94, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12120956 chr1 113202571 Intron 6 11764 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.849 LEAD_SNP rs11590090 chr1 113313563 Intergenic 4 ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.52287874528 FAM19A3 - RPL39P8 FUNCTIONAL_SNP rs12733192 chr1 113310418 Intergenic 5b 3145 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs10857975 chr1 113321594 Intergenic 7 8031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.816 LEAD_SNP rs6679677 chr1 114303808 Intergenic 7 ASSOCIATION 18978792 Type 1 diabetes 40.0 RPS2P14 - RSBN1 ASSOCIATION 18794853 Rheumatoid arthritis 41.2218487496 RPS2P14 - RSBN1 ASSOCIATION 17554300 Rheumatoid arthritis 24.2218487496 RPS2P14 - RSBN1 ASSOCIATION 17554300 Type 1 diabetes 25.3010299957 RPS2P14 - RSBN1 ASSOCIATION 17554260 Type 1 diabetes 23.096910013 RPS2P14 - RSBN1 LEAD_SNP rs2476601 chr1 114377568 Coding 3a ASSOCIATION 20453842 Rheumatoid arthritis 73.0457574906 PTPN22 ASSOCIATION 20410501 Vitiligo 7.0 PTPN22 ASSOCIATION 19503088 Rheumatoid arthritis 20.6989700043 PTPN22 ASSOCIATION 19430480 Type 1 diabetes 84.0457574906 PTPN22 ASSOCIATION 18587394 Crohn's disease 8.0 PTPN22 ASSOCIATION 17804836 Rheumatoid arthritis 10.6989700043 PTPN22 ASSOCIATION 17632545 Type 1 diabetes 7.0 PTPN22 ASSOCIATION 17554260 Type 1 diabetes 79.6989700043 PTPN22 FUNCTIONAL_SNP rs6679677 chr1 114303808 Intergenic 7 73760 CEU:1.0;1.0 LEAD_SNP rs2774292 chr1 114715584 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.52287874528 SYT6 - MRP63P1 FUNCTIONAL_SNP rs209887 chr1 114762282 Intron 4 46698 CEU:1.0;1.0 FUNCTIONAL_SNP rs209888 chr1 114762005 Intron 5b 46421 CEU:1.0;1.0 FUNCTIONAL_SNP rs11102756 chr1 114776652 Intron 6 61068 CEU:1.0;1.0 FUNCTIONAL_SNP rs209890 chr1 114760355 Intron 6 44771 CEU:1.0;1.0 FUNCTIONAL_SNP rs17032472 chr1 114712999 Intergenic 6 2585 CEU:1.0;1.0 FUNCTIONAL_SNP rs480226 chr1 114713205 Intergenic 7 2379 CEU:1.0;1.0, YRI:1.0;0.774 FUNCTIONAL_SNP rs209898 chr1 114751129 Intron 7 35545 CEU:1.0;1.0 FUNCTIONAL_SNP rs10081970 chr1 114709094 Intergenic 7 6490 CEU:1.0;1.0 FUNCTIONAL_SNP rs2774293 chr1 114714779 Intergenic 7 805 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11576155 chr1 114713151 Intergenic 7 2433 CEU:1.0;1.0 FUNCTIONAL_SNP rs12087933 chr1 114773151 Intron 7 57567 CEU:1.0;1.0 FUNCTIONAL_SNP rs11102750 chr1 114774666 Intron 7 59082 CEU:1.0;1.0 LEAD_SNP rs195204 chr1 115734091 Intergenic 7 ASSOCIATION 21529783 Alcoholism (heaviness of drinking) 5.04575749056 TSPAN2 - NGF FUNCTIONAL_SNP rs195202 chr1 115734463 Intergenic 4 372 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6663097 chr1 115721902 Intergenic 4 12189 CEU:1.0;0.89, CHB:0.939;0.716, JPT:1.0;0.953 FUNCTIONAL_SNP rs6663098 chr1 115721903 Intergenic 4 12188 CEU:1.0;0.889, CHB:0.937;0.709, JPT:0.935;0.703 FUNCTIONAL_SNP rs6703230 chr1 115721969 Intergenic 4 12122 CEU:1.0;1.0, CHB:0.949;0.82, JPT:1.0;0.867 FUNCTIONAL_SNP rs195199 chr1 115735121 Intergenic 4 1030 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10858066 chr1 115721655 Intergenic 7 12436 CEU:1.0;0.889, CHB:0.945;0.737, JPT:1.0;0.953 LEAD_SNP rs4074536 chr1 116310967 Coding 6 ASSOCIATION 21076409 Ventricular conduction 7.69897000434 CASQ2 FUNCTIONAL_SNP rs4484922 chr1 116310818 Intron 7 149 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12025416 chr1 117038287 Intron 5b ASSOCIATION 21244703 Multiple sclerosis 7.0 ATP1A1OS - CD58 LEAD_SNP rs1335532 chr1 117100957 Intron 3a ASSOCIATION 19525955 Multiple sclerosis 7.0 CD58 FUNCTIONAL_SNP rs10802190 chr1 117061384 Exon,non-coding 5a 39573 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.898 FUNCTIONAL_SNP rs6677309 chr1 117080166 Intron 4 20791 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.853, YRI:0.919;0.813 FUNCTIONAL_SNP rs1109190 chr1 117046263 Intron 4 54694 CEU:1.0;0.927, CHB:1.0;0.866, JPT:0.941;0.796 FUNCTIONAL_SNP rs11588376 chr1 117072524 Intron 5a 28433 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.898 FUNCTIONAL_SNP rs12044852 chr1 117087779 Intron 5a 13178 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;0.898 FUNCTIONAL_SNP rs10924108 chr1 117062474 Intron 5a 38483 CEU:1.0;1.0, CHB:1.0;0.866, JPT:1.0;0.897 FUNCTIONAL_SNP rs9651076 chr1 117043302 Intron 5b 57655 CEU:1.0;0.927, CHB:1.0;0.866, JPT:0.943;0.843, YRI:0.918;0.727 FUNCTIONAL_SNP rs10802191 chr1 117065083 Intron 5b 35874 CEU:1.0;1.0 FUNCTIONAL_SNP rs956184 chr1 117040622 Intron 5b 60335 CEU:1.0;0.927, CHB:1.0;0.866, JPT:0.943;0.843 FUNCTIONAL_SNP rs12025416 chr1 117038287 Intron 5b 62670 CEU:1.0;0.853, JPT:0.932;0.725 FUNCTIONAL_SNP rs758518 chr1 117081810 Intron 5b 19147 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.898 FUNCTIONAL_SNP rs1414275 chr1 117066907 Intron 6 34050 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.898 FUNCTIONAL_SNP rs3850814 chr1 117043044 Intron 6 57913 CEU:1.0;0.927, CHB:1.0;0.866, JPT:0.943;0.843, YRI:0.921;0.788 FUNCTIONAL_SNP rs2300747 chr1 117104215 Intron 6 3258 CEU:1.0;0.923, CHB:1.0;0.952, JPT:1.0;0.895 FUNCTIONAL_SNP rs10754444 chr1 117049676 Intron 7 51281 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.898 FUNCTIONAL_SNP rs4143029 chr1 117048330 Intron 7 52627 CEU:1.0;1.0, CHB:0.949;0.858, JPT:0.888;0.789 FUNCTIONAL_SNP rs10924106 chr1 117053745 Intron 7 47212 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;0.898 FUNCTIONAL_SNP rs1016140 chr1 117076547 Intron 7 24410 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.898 FUNCTIONAL_SNP rs12031061 chr1 117054011 Intron 7 46946 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.898 FUNCTIONAL_SNP rs12141411 chr1 117084410 Intron 7 16547 CEU:1.0;0.923, CHB:1.0;0.908, JPT:1.0;0.898 LEAD_SNP rs2300747 chr1 117104215 Intron 6 ASSOCIATION 19525953 Multiple sclerosis 9.52287874528 CD58 LEAD_SNP rs2806864 chr1 117469781 Intron 5a ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 6.22184874962 PTGFRN FUNCTIONAL_SNP rs2250849 chr1 117462941 Intron 2b 6840 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2250337 chr1 117466243 Intron 4 3538 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2250865 chr1 117462691 Intron 4 7090 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2250855 chr1 117462800 Intron 5a 6981 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2250096 chr1 117468983 Intron 5a 798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs943371 chr1 117467690 Intron 5b 2091 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2250457 chr1 117465765 Intron 5b 4016 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2806863 chr1 117469513 Intron 7 268 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12046117 chr1 117751365 Intron 7 ASSOCIATION 19116933 Arthritis (juvenile idiopathic) 6.0 VTCN1 FUNCTIONAL_SNP rs10923228 chr1 117750686 Intron 5b 679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17038182 chr1 118868405 Intergenic 5b ASSOCIATION 19396169 Height 6.30102999566 SPAG17 - TBX15 LEAD_SNP rs12735613 chr1 118883973 Intergenic 7 ASSOCIATION 18391952 Height 10.3979400087 SPAG17 - TBX15 FUNCTIONAL_SNP rs17038218 chr1 118908373 Intergenic 7 24400 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:0.933;0.871 FUNCTIONAL_SNP rs12746543 chr1 118888905 Intergenic 7 4932 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:0.933;0.871 LEAD_SNP rs984222 chr1 119503843 Intron 4 ASSOCIATION 20935629 Waist-hip ratio 24.0457574906 TBX15 FUNCTIONAL_SNP rs10923724 chr1 119546842 Intergenic 5b 42999 CEU:1.0;0.854, CHB:1.0;0.904, JPT:1.0;0.865 FUNCTIONAL_SNP rs984225 chr1 119504284 Intron 7 441 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10923712 chr1 119505434 Intron 7 1591 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10923931 chr1 120517959 Intron 7 ASSOCIATION 18372903 Type 2 diabetes 7.39794000867 NOTCH2 FUNCTIONAL_SNP rs2641348 chr1 120437884 Coding 5b 80075 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs699779 chr1 120455310 Exon,non-coding 7 62649 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs835575 chr1 120456563 Exon,non-coding 5b 61396 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs835576 chr1 120455586 Exon,non-coding 7 62373 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs2641352 chr1 120446063 Intergenic 2b 71896 CEU:0.898;0.806, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2453040 chr1 120529750 Intron 4 11791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs327205 chr1 120559942 Intron 5b 41983 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs7515431 chr1 120513548 Intron 5b 4411 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs2493391 chr1 120472507 Intron 5b 45452 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2793831 chr1 120523902 Intron 5b 5943 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2934381 chr1 120506108 Intron 5b 11851 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7534585 chr1 120496119 Intron 5b 21840 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7534586 chr1 120496127 Intron 5b 21832 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2493392 chr1 120471857 Intron 6 46102 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2493394 chr1 120471224 Intron 6 46735 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2934387 chr1 120495506 Intron 6 22453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs3897478 chr1 120451190 Intergenic 7 66769 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2641346 chr1 120443540 Intergenic 7 74419 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10127888 chr1 120498250 Intron 7 19709 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2027447 chr1 120440029 Intergenic 7 77930 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2453058 chr1 120480709 Intron 7 37250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2641317 chr1 120516618 Intron 7 1341 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs2793829 chr1 120461253 Intron 7 56706 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6600671 chr1 121200490 Intron 3a ASSOCIATION 17903296 Hip geometry 6.22184874962 SRGAP2P1 - MTIF2P1 LEAD_SNP rs11249433 chr1 121280613 Intergenic 5b ASSOCIATION 19330030 Breast cancer 9.15490195999 EMBP1 LEAD_SNP rs1967017 chr1 145723645 Intergenic 2a ASSOCIATION 20884846 Serum urate 7.39794000867 CD160 - PDZK1 FUNCTIONAL_SNP rs1471633 chr1 145723739 Intergenic 2b 94 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs10910845 chr1 145723120 Intergenic 5a 525 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.902 LEAD_SNP rs12129861 chr1 145725689 Intergenic 6 ASSOCIATION 19503597 Serum uric acid 8.52287874528 CD160 - PDZK1 LEAD_SNP rs12122100 chr1 146508934 Intergenic 6 ASSOCIATION 20041166 HIV-1 control 6.0 AE01 - TRNAE34P FUNCTIONAL_SNP rs6681167 chr1 146506862 Intergenic 5b 2072 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12142005 chr1 146506691 Intergenic 7 2243 CEU:1.0;0.831, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs12142004 chr1 146506676 Intergenic 7 2258 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11239930 chr1 146560564 Intergenic 7 ASSOCIATION 21502085 AIDS progression 5.69897000434 NBPF13P FUNCTIONAL_SNP rs10900313 chr1 146560747 Intergenic 6 183 CEU:1.0;1.0 LEAD_SNP rs4950322 chr1 146854836 Intergenic 7 ASSOCIATION 18464913 Protein quantitative trait loci 6.15490195999 CHD1L - OR13Z1P ASSOCIATION 18464913 Protein quantitative trait loci 6.69897000434 CHD1L - OR13Z1P FUNCTIONAL_SNP rs17356735 chr1 146850049 Intergenic 5a 4787 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1806618 chr1 146848796 Intergenic 7 6040 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11205277 chr1 149892872 Intergenic 6 ASSOCIATION 18391951 Height 10.0 SV2A - SF3B4 LEAD_SNP rs267734 chr1 150951477 Intergenic 5a ASSOCIATION 20383146 Chronic kidney disease 12.0 LASS2 - ANXA9 FUNCTIONAL_SNP rs267738 chr1 150940625 Coding 5b 10852 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10788819 chr1 151895093 Intergenic 6 ASSOCIATION 19896111 Hair morphology 7.69897000434 THEM4 - KRT8P28 LEAD_SNP rs3124314 chr1 152037515 Intergenic 6 ASSOCIATION 19896111 Hair morphology 5.39794000867 S100A11 - TCHHL1 FUNCTIONAL_SNP rs2069258 chr1 152045626 Intergenic 6 8111 CEU:0.914;0.801, CHB:1.0;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs3124315 chr1 152039711 Intergenic 6 2196 CEU:0.914;0.801, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs17646946 chr1 152062767 Intergenic 4 ASSOCIATION 20585627 Common traits (Other) 41.6989700043 TCHHL1 FUNCTIONAL_SNP rs11803731 chr1 152083325 Coding 4 20558 CEU:1.0;0.95, CHB:1.0;1.0 FUNCTIONAL_SNP rs4845418 chr1 152136230 Intergenic 7 73463 CEU:1.0;0.813, CHB:1.0;1.0 FUNCTIONAL_SNP rs12130862 chr1 152027015 Intergenic 7 35752 CEU:1.0;0.952, CHB:1.0;1.0 LEAD_SNP rs11803731 chr1 152083325 Coding 4 ASSOCIATION 19896111 Hair morphology 30.5228787453 TCHH FUNCTIONAL_SNP rs17646946 chr1 152062767 Intergenic 4 20558 CEU:1.0;0.95, CHB:1.0;1.0 FUNCTIONAL_SNP rs4845418 chr1 152136230 Intergenic 7 52905 CEU:1.0;0.815, CHB:1.0;1.0 FUNCTIONAL_SNP rs12130862 chr1 152027015 Intergenic 7 56310 CEU:0.951;0.905, CHB:1.0;1.0 LEAD_SNP rs3126085 chr1 152300817 Intron 7 ASSOCIATION 21666691 Atopic dermatitis 11.2218487496 FLG - FLG2 FUNCTIONAL_SNP rs2065955 chr1 152277055 Coding 6 23762 CEU:1.0;0.926 FUNCTIONAL_SNP rs6587647 chr1 152192631 Coding 7 108186 CEU:0.925;0.856, CHB:1.0;0.826, JPT:1.0;0.773 FUNCTIONAL_SNP rs6587651 chr1 152193121 Coding 7 107696 CEU:0.925;0.856, CHB:1.0;0.826, JPT:1.0;0.709 FUNCTIONAL_SNP rs6662450 chr1 152191709 Coding 6 109108 CEU:0.925;0.855, CHB:1.0;0.822, JPT:1.0;0.676, YRI:0.836;0.647 FUNCTIONAL_SNP rs3126066 chr1 152276871 Coding 7 23946 CEU:0.925;0.856, CHB:1.0;0.911, JPT:1.0;0.826, YRI:1.0;0.828 FUNCTIONAL_SNP rs11204937 chr1 152193851 Coding 7 106966 CEU:0.926;0.857, CHB:1.0;0.829, JPT:1.0;0.714, YRI:0.838;0.607 FUNCTIONAL_SNP rs11204978 chr1 152282917 Coding 7 17900 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11584340 chr1 152285930 Coding 7 14887 CEU:0.925;0.856, CHB:1.0;0.909, JPT:1.0;0.709 FUNCTIONAL_SNP rs7520249 chr1 152192114 Coding 7 108703 CEU:0.925;0.855, CHB:1.0;0.822, JPT:1.0;0.702, YRI:0.82;0.573 FUNCTIONAL_SNP rs4845745 chr1 152185184 Exon,non-coding 6 115633 CEU:0.926;0.857, CHB:0.949;0.821, JPT:1.0;0.714 FUNCTIONAL_SNP rs4845423 chr1 152184950 Exon,non-coding 6 115867 CEU:0.926;0.857, CHB:0.947;0.78, JPT:1.0;0.714 FUNCTIONAL_SNP rs1496045 chr1 152184704 Exon,non-coding 5b 116113 CEU:0.926;0.857, CHB:0.947;0.78, JPT:1.0;0.714 FUNCTIONAL_SNP rs4845733 chr1 152162568 Intergenic 2b 138249 CEU:0.926;0.857, CHB:1.0;0.829, JPT:0.939;0.661 FUNCTIONAL_SNP rs1496049 chr1 152161949 Intergenic 3a 138868 CEU:1.0;0.906, CHB:0.945;0.808, JPT:0.934;0.639 FUNCTIONAL_SNP rs6666382 chr1 152217226 Intergenic 4 83591 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714 FUNCTIONAL_SNP rs11583524 chr1 152161657 Intergenic 4 139160 CEU:0.926;0.857, CHB:1.0;0.863, JPT:0.934;0.7 FUNCTIONAL_SNP rs10888467 chr1 152171707 Intergenic 4 129110 CEU:0.926;0.857, CHB:1.0;0.829, JPT:1.0;0.714 FUNCTIONAL_SNP rs1390490 chr1 152161354 Intergenic 4 139463 CEU:0.925;0.856, CHB:1.0;0.867, JPT:0.937;0.654 FUNCTIONAL_SNP rs10788824 chr1 152161694 Intergenic 4 139123 CEU:0.926;0.857, CHB:1.0;0.869, JPT:0.939;0.661 FUNCTIONAL_SNP rs1552993 chr1 152171483 Intergenic 5a 129334 CEU:0.925;0.856, CHB:1.0;0.82, JPT:1.0;0.638, YRI:0.838;0.608 FUNCTIONAL_SNP rs1496051 chr1 152164923 Intergenic 5a 135894 CEU:0.925;0.856, CHB:1.0;0.829, JPT:0.939;0.661 FUNCTIONAL_SNP rs11588174 chr1 152175970 Intergenic 5b 124847 CEU:0.926;0.857, CHB:0.947;0.78, JPT:1.0;0.714 FUNCTIONAL_SNP rs4845736 chr1 152175551 Intergenic 5b 125266 CEU:1.0;0.922, CHB:0.947;0.78, JPT:1.0;0.714 FUNCTIONAL_SNP rs11590365 chr1 152165489 Intergenic 5b 135328 CEU:1.0;0.926, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs4326625 chr1 152223996 Intergenic 5b 76821 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714 FUNCTIONAL_SNP rs10749669 chr1 152177289 Intergenic 5b 123528 CEU:0.926;0.857, CHB:0.947;0.78, JPT:1.0;0.714 FUNCTIONAL_SNP rs10749670 chr1 152220467 Intergenic 5b 80350 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.798;0.569 FUNCTIONAL_SNP rs11204934 chr1 152176848 Intergenic 5b 123969 CEU:0.926;0.857, CHB:0.947;0.78, JPT:1.0;0.714 FUNCTIONAL_SNP rs2152862 chr1 152259742 Intergenic 5b 41075 CEU:0.926;0.857, CHB:1.0;0.909, JPT:1.0;0.714, YRI:0.844;0.663 FUNCTIONAL_SNP rs1858480 chr1 152301735 Intron 5b 918 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:1.0;1.0 FUNCTIONAL_SNP rs7535078 chr1 152222915 Intergenic 5b 77902 CEU:0.921;0.849, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.959;0.821 FUNCTIONAL_SNP rs1496050 chr1 152163549 Intergenic 5b 137268 CEU:0.926;0.857, CHB:1.0;0.829, JPT:0.939;0.661 FUNCTIONAL_SNP rs10888466 chr1 152166223 Intergenic 5b 134594 CEU:0.926;0.857, CHB:1.0;0.829, JPT:1.0;0.714 FUNCTIONAL_SNP rs3120662 chr1 152302865 Intron 6 2048 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6676012 chr1 152213203 Intergenic 6 87614 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.797;0.569 FUNCTIONAL_SNP rs6661167 chr1 152312870 Intron 6 12053 CEU:0.925;0.857, CHB:1.0;1.0, JPT:1.0;0.905 FUNCTIONAL_SNP rs2291770 chr1 152179792 Intergenic 6 121025 CEU:0.925;0.856, CHB:0.947;0.78, JPT:1.0;0.714 FUNCTIONAL_SNP rs11586114 chr1 152299767 Intron 6 1050 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7550106 chr1 152197202 Intergenic 6 103615 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.96;0.795 FUNCTIONAL_SNP rs4845742 chr1 152183949 Intergenic 6 116868 CEU:0.926;0.857, CHB:0.947;0.78, JPT:1.0;0.708 FUNCTIONAL_SNP rs2184951 chr1 152273168 Intergenic 6 27649 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714 FUNCTIONAL_SNP rs10888470 chr1 152200472 Intergenic 6 100345 CEU:0.926;0.857, CHB:1.0;0.909, JPT:1.0;0.714, YRI:0.802;0.576 FUNCTIONAL_SNP rs11204971 chr1 152259078 Intergenic 6 41739 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11204976 chr1 152273777 Intergenic 6 27040 CEU:0.916;0.84, CHB:1.0;0.9, JPT:1.0;0.689 FUNCTIONAL_SNP rs1390487 chr1 152194601 Intron 6 106216 CEU:0.926;0.857, CHB:1.0;0.869, JPT:1.0;0.714 FUNCTIONAL_SNP rs3126095 chr1 152309683 Intron 6 8866 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4298736 chr1 152240269 Intergenic 6 60548 CEU:0.925;0.856 FUNCTIONAL_SNP rs12746239 chr1 152246726 Intergenic 6 54091 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714 FUNCTIONAL_SNP rs991231 chr1 152211898 Intergenic 6 88919 CEU:0.926;0.857, CHB:0.951;0.863, JPT:1.0;0.714 FUNCTIONAL_SNP rs11584427 chr1 152299788 Intron 7 1029 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3120659 chr1 152293202 Intron 7 7615 CEU:0.926;0.857, CHB:1.0;0.909, JPT:0.937;0.654 FUNCTIONAL_SNP rs1858482 chr1 152306921 Intron 7 6104 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11587676 chr1 152159961 Intergenic 7 140856 CEU:1.0;0.926, CHB:1.0;0.829, JPT:0.948;0.817 FUNCTIONAL_SNP rs2338430 chr1 152214420 Intergenic 7 86397 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.802;0.576 FUNCTIONAL_SNP rs4595369 chr1 152248193 Intergenic 7 52624 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.845;0.663 FUNCTIONAL_SNP rs4845750 chr1 152201217 Intergenic 7 99600 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.802;0.576 FUNCTIONAL_SNP rs4845751 chr1 152208997 Intergenic 7 91820 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.703, YRI:0.802;0.577 FUNCTIONAL_SNP rs11204980 chr1 152296191 Intron 7 4626 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714 FUNCTIONAL_SNP rs877776 chr1 152178018 Intergenic 7 122799 CEU:0.926;0.857, CHB:0.947;0.78, JPT:1.0;0.714 FUNCTIONAL_SNP rs2338555 chr1 152309380 Intron 7 8563 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6587666 chr1 152296863 Intron 7 3954 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714 FUNCTIONAL_SNP rs10888471 chr1 152200849 Intergenic 7 99968 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.96;0.795 FUNCTIONAL_SNP rs10888472 chr1 152206896 Intergenic 7 93921 CEU:0.926;0.857 FUNCTIONAL_SNP rs10888473 chr1 152220235 Intergenic 7 80582 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.802;0.576 FUNCTIONAL_SNP rs10888475 chr1 152226012 Intergenic 7 74805 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.96;0.796 FUNCTIONAL_SNP rs3126046 chr1 152256925 Intergenic 7 43892 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.845;0.663 FUNCTIONAL_SNP rs3126088 chr1 152305785 Intron 7 4968 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3126091 chr1 152307338 Intron 7 6521 CEU:0.921;0.849, CHB:1.0;0.909, JPT:1.0;0.714 FUNCTIONAL_SNP rs3126098 chr1 152311923 Intron 7 11106 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs11204947 chr1 152218257 Intergenic 7 82560 CEU:0.925;0.856, CHB:1.0;0.911, JPT:1.0;0.714 FUNCTIONAL_SNP rs11204948 chr1 152218473 Intergenic 7 82344 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714 FUNCTIONAL_SNP rs11204967 chr1 152249720 Intergenic 7 51097 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714 FUNCTIONAL_SNP rs4845428 chr1 152225261 Intergenic 7 75556 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.709, YRI:0.861;0.566 FUNCTIONAL_SNP rs11204981 chr1 152298212 Intron 7 2605 CEU:0.925;0.856, CHB:1.0;0.906, JPT:1.0;0.714 FUNCTIONAL_SNP rs4845431 chr1 152227977 Intergenic 7 72840 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.961;0.827 FUNCTIONAL_SNP rs1969019 chr1 152211502 Intergenic 7 89315 CEU:0.925;0.856, CHB:1.0;0.907, JPT:1.0;0.708, YRI:0.797;0.569 FUNCTIONAL_SNP rs4511111 chr1 152211624 Intergenic 7 89193 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4511113 chr1 152222192 Intergenic 7 78625 CEU:0.926;0.857, CHB:1.0;0.909, JPT:1.0;0.708, YRI:0.802;0.577 FUNCTIONAL_SNP rs1390488 chr1 152199500 Intergenic 7 101317 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.802;0.576 FUNCTIONAL_SNP rs1858478 chr1 152257457 Intergenic 7 43360 CEU:0.926;0.857, CHB:1.0;0.911, JPT:1.0;0.714, YRI:0.845;0.663 FUNCTIONAL_SNP rs11204943 chr1 152203906 Intergenic 7 96911 CEU:0.926;0.857, CHB:1.0;0.952, JPT:1.0;0.714, YRI:0.799;0.571 FUNCTIONAL_SNP rs7537633 chr1 152223333 Intergenic 7 77484 CEU:0.916;0.84, CHB:1.0;0.909, JPT:1.0;0.745, YRI:0.824;0.58 FUNCTIONAL_SNP rs1496046 chr1 152184534 Intergenic 7 116283 CEU:0.926;0.857, CHB:0.947;0.78, JPT:1.0;0.714, YRI:0.83;0.554 LEAD_SNP rs3120665 chr1 152316590 Intron 7 ASSOCIATION 20691247 Personality dimensions 5.39794000867 FLG - FLG2 FUNCTIONAL_SNP rs3818831 chr1 152331240 Coding 5a 14650 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.963 FUNCTIONAL_SNP rs3120667 chr1 152318161 Intron 7 1571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs908922 chr1 152454591 Intergenic 2b ASSOCIATION 19896111 Hair morphology 5.39794000867 CRNN - LCE5A FUNCTIONAL_SNP rs6669608 chr1 152475233 Intergenic 4 20642 CEU:1.0;0.954, CHB:1.0;0.938, JPT:1.0;0.517 FUNCTIONAL_SNP rs2181173 chr1 152474866 Intergenic 5b 20275 CEU:0.955;0.912 FUNCTIONAL_SNP rs4845783 chr1 152492559 Intergenic 5b 37968 CEU:1.0;1.0, CHB:1.0;0.873 FUNCTIONAL_SNP rs499697 chr1 152493154 Intergenic 5b 38563 CEU:1.0;0.956, CHB:1.0;0.938 FUNCTIONAL_SNP rs6587688 chr1 152529622 Intergenic 6 75031 CEU:1.0;0.956, CHB:1.0;0.937 FUNCTIONAL_SNP rs1415432 chr1 152480654 Intergenic 6 26063 CEU:1.0;0.956, CHB:1.0;0.938 FUNCTIONAL_SNP rs499913 chr1 152476743 Intergenic 6 22152 CEU:1.0;0.956, CHB:1.0;0.935, JPT:1.0;0.517 FUNCTIONAL_SNP rs11205010 chr1 152457964 Intergenic 7 3373 CEU:0.955;0.912, JPT:0.936;0.74 FUNCTIONAL_SNP rs1538084 chr1 152496012 Intergenic 7 41421 CEU:1.0;0.899, CHB:1.0;0.795 FUNCTIONAL_SNP rs7535188 chr1 152475899 Intergenic 7 21308 CEU:0.955;0.912 FUNCTIONAL_SNP rs4240882 chr1 152456358 Intergenic 7 1767 CEU:1.0;0.955, JPT:1.0;0.949 LEAD_SNP rs499697 chr1 152493154 Intergenic 5b ASSOCIATION 20585627 Common traits (Other) 10.0 CRCT1 - LCE3E FUNCTIONAL_SNP rs908922 chr1 152454591 Intergenic 2b 38563 CEU:1.0;0.956, CHB:1.0;0.938 FUNCTIONAL_SNP rs6669608 chr1 152475233 Intergenic 4 17921 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933 FUNCTIONAL_SNP rs2181173 chr1 152474866 Intergenic 5b 18288 CEU:1.0;0.956, JPT:0.931;0.867 FUNCTIONAL_SNP rs4845783 chr1 152492559 Intergenic 5b 595 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs6587688 chr1 152529622 Intergenic 6 36468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933 FUNCTIONAL_SNP rs1415432 chr1 152480654 Intergenic 6 12500 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs499913 chr1 152476743 Intergenic 6 16411 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933 FUNCTIONAL_SNP rs4845779 chr1 152479176 Intergenic 6 13978 CEU:1.0;0.803, CHB:1.0;1.0, JPT:1.0;0.933 FUNCTIONAL_SNP rs11205010 chr1 152457964 Intergenic 7 35190 CEU:1.0;0.956, JPT:0.908;0.529 FUNCTIONAL_SNP rs1538084 chr1 152496012 Intergenic 7 2858 CEU:1.0;0.948, CHB:1.0;0.855, JPT:1.0;0.76 FUNCTIONAL_SNP rs4240882 chr1 152456358 Intergenic 7 36796 CEU:1.0;0.911 FUNCTIONAL_SNP rs7535188 chr1 152475899 Intergenic 7 17255 CEU:1.0;0.956, JPT:0.931;0.867 LEAD_SNP rs10888501 chr1 152537954 Intergenic 4 ASSOCIATION 19721433 Response to antipsychotic treatment 6.0 LCE3E LEAD_SNP rs4085613 chr1 152550018 Intergenic 5b ASSOCIATION 19169255 Psoriasis 29.15490196 LCE3E - LCE3D FUNCTIONAL_SNP rs10888503 chr1 152593549 Intergenic 5b 43531 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;0.949, YRI:1.0;0.92 FUNCTIONAL_SNP rs477392 chr1 152555176 Intergenic 5b 5158 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4845454 chr1 152592184 Intergenic 5b 42166 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs1581803 chr1 152592281 Intergenic 5b 42263 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs4845449 chr1 152591024 Intergenic 6 41006 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs1886734 chr1 152591142 Intergenic 6 41124 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs6700158 chr1 152592828 Intergenic 6 42810 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs4845446 chr1 152590750 Intergenic 7 40732 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs4845450 chr1 152591200 Intergenic 7 41182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;0.957 FUNCTIONAL_SNP rs6677595 chr1 152590187 Intergenic 7 40169 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs6693105 chr1 152590663 Intergenic 7 40645 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.949, YRI:1.0;0.883 FUNCTIONAL_SNP rs6701307 chr1 152590444 Intergenic 7 40426 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;0.949, YRI:1.0;1.0 LEAD_SNP rs4112788 chr1 152551276 Intergenic 7 ASSOCIATION 20953190 Psoriasis 9.52287874528 LCE3E - LCE3D FUNCTIONAL_SNP rs4085613 chr1 152550018 Intergenic 5b 1258 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0 FUNCTIONAL_SNP rs4845454 chr1 152592184 Intergenic 5b 40908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs10888503 chr1 152593549 Intergenic 5b 42273 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs477392 chr1 152555176 Intergenic 5b 3900 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1581803 chr1 152592281 Intergenic 5b 41005 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs4845449 chr1 152591024 Intergenic 6 39748 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs1886734 chr1 152591142 Intergenic 6 39866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs4112787 chr1 152551325 Intergenic 6 49 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs4845459 chr1 152603842 Intergenic 6 52566 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs6700158 chr1 152592828 Intergenic 6 41552 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs6702463 chr1 152598711 Intergenic 6 47435 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs4845446 chr1 152590750 Intergenic 7 39474 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs4845450 chr1 152591200 Intergenic 7 39924 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs4845453 chr1 152591953 Intergenic 7 40677 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.949 FUNCTIONAL_SNP rs6677595 chr1 152590187 Intergenic 7 38911 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs6693105 chr1 152590663 Intergenic 7 39387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs6701307 chr1 152590444 Intergenic 7 39168 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 LEAD_SNP rs4845552 chr1 153479998 Intergenic 4 ASSOCIATION 19668339 Hippocampal atrophy 5.22184874962 S100A7 - S100A6 LEAD_SNP rs4434872 chr1 153774276 Intergenic 5b ASSOCIATION 20585324 Conduct disorder (symptom count) 5.09691001301 LOC343052 LEAD_SNP rs4537545 chr1 154418879 Intron 4 ASSOCIATION 19567438 C-reactive protein 13.6989700043 IL6R FUNCTIONAL_SNP rs7529229 chr1 154420778 Intron 2b 1899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs4129267 chr1 154426264 Intron 2b 7385 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs4453032 chr1 154414086 Intron 5a 4793 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs4845623 chr1 154415777 Intron 5a 3102 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs4393147 chr1 154414037 Intron 5a 4842 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs6664201 chr1 154414296 Intron 5b 4583 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs6684439 chr1 154395839 Intron 5b 23040 CEU:0.952;0.828, CHB:1.0;0.954, JPT:1.0;0.952 FUNCTIONAL_SNP rs7518199 chr1 154407419 Intron 5b 11460 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;0.952 FUNCTIONAL_SNP rs4845622 chr1 154411419 Intron 7 7460 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.952 LEAD_SNP rs4129267 chr1 154426264 Intron 2b ASSOCIATION 21300955 C-reactive protein 47.6989700043 IL6R ASSOCIATION 18464913 Protein quantitative trait loci 56.6989700043 IL6R ASSOCIATION 17903307 Pulmonary function traits (other) 5.15490195999 IL6R FUNCTIONAL_SNP rs7529229 chr1 154420778 Intron 2b 5486 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs4537545 chr1 154418879 Intron 4 7385 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs4453032 chr1 154414086 Intron 5a 12178 CEU:1.0;0.956, CHB:1.0;1.0, JPT:0.951;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs4845623 chr1 154415777 Intron 5a 10487 CEU:1.0;0.957, CHB:1.0;1.0, JPT:0.951;0.904 FUNCTIONAL_SNP rs4393147 chr1 154414037 Intron 5a 12227 CEU:1.0;0.955, CHB:1.0;1.0, JPT:0.951;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs6664201 chr1 154414296 Intron 5b 11968 CEU:1.0;0.957, CHB:1.0;1.0, JPT:0.951;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs6684439 chr1 154395839 Intron 5b 30425 CEU:0.953;0.83, CHB:1.0;0.954, JPT:0.951;0.904 FUNCTIONAL_SNP rs7518199 chr1 154407419 Intron 5b 18845 CEU:1.0;0.957, CHB:1.0;0.954, JPT:0.951;0.904 FUNCTIONAL_SNP rs4845622 chr1 154411419 Intron 7 14845 CEU:1.0;0.957, CHB:1.0;1.0, JPT:0.951;0.904, YRI:1.0;0.792 LEAD_SNP rs13376333 chr1 154814353 Intron 5b ASSOCIATION 20173747 Atrial fibrillation 20.6989700043 KCNN3 FUNCTIONAL_SNP rs6666258 chr1 154814268 Intron 5b 85 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4072037 chr1 155162067 Coding 4 ASSOCIATION 20729852 Esophageal cancer and gastric cancer 6.39794000867 MUC1 ASSOCIATION 20700443 Serum magnesium levels 35.6989700043 MUC1 FUNCTIONAL_SNP rs364897 chr1 155208006 Coding 6 45939 CEU:0.948;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.921 FUNCTIONAL_SNP rs914615 chr1 155175892 Exon,non-coding 5a 13825 CEU:1.0;0.96, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs2049805 chr1 155194980 Intron 4 32913 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs2990245 chr1 155197462 Intergenic 4 35395 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs2066981 chr1 155172379 Intron 5b 10312 CEU:0.958;0.919, CHB:1.0;0.92, JPT:1.0;0.896, YRI:0.96;0.855 LEAD_SNP rs2282301 chr1 155868625 Exon,non-coding 6 ASSOCIATION 18846501 Conduct disorder (interaction) 5.15490195999 RIT1 FUNCTIONAL_SNP rs915181 chr1 155914772 Intergenic 4 46147 CEU:1.0;1.0, CHB:1.0;0.849, JPT:1.0;0.863, YRI:1.0;0.911 FUNCTIONAL_SNP rs12568523 chr1 155897666 Intron 5b 29041 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs867550 chr1 155880391 Intron 5b 11766 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.911 FUNCTIONAL_SNP rs6667652 chr1 155906798 Intergenic 6 38173 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.932, YRI:1.0;0.911 FUNCTIONAL_SNP rs12037177 chr1 155877029 Intron 6 8404 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.911 FUNCTIONAL_SNP rs867549 chr1 155880159 Intron 6 11534 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6696019 chr1 155864977 Intergenic 7 3648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.911 LEAD_SNP rs34372695 chr1 156030037 Intergenic 7 ASSOCIATION 21292315 Parkinson's disease 11.3979400087 RAB25 FUNCTIONAL_SNP rs35643925 chr1 156154860 Intergenic 7 124823 CEU:1.0;1.0 LEAD_SNP rs6684514 chr1 156255456 Coding 7 ASSOCIATION 20139978 Hematological and biochemical traits 8.52287874528 TMEM79 FUNCTIONAL_SNP rs10908495 chr1 156263940 Coding 5b 8484 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10908496 chr1 156264000 Coding 5b 8544 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs6800 chr1 156262653 Exon,non-coding 6 7197 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11264475 chr1 156306918 Exon,non-coding 4 51462 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12141236 chr1 156302575 Exon,non-coding 7 47119 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10908500 chr1 156280671 Intron 2a 25215 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3806407 chr1 156251742 Intron 2b 3714 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3806408 chr1 156252137 Intron 2b 3319 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7522948 chr1 156275308 Intergenic 4 19852 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12132794 chr1 156281020 Intron 4 25564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs10908498 chr1 156278175 Intergenic 4 22719 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11264462 chr1 156241728 Intron 5a 13728 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.816 FUNCTIONAL_SNP rs12022657 chr1 156314147 Intron 5b 58691 CEU:1.0;1.0, CHB:1.0;0.928, JPT:0.934;0.872, YRI:1.0;0.829 FUNCTIONAL_SNP rs12023438 chr1 156254358 Intron 5b 1098 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12117903 chr1 156311165 Intron 5b 55709 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12127403 chr1 156273346 Intergenic 5b 17890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2241106 chr1 156218910 Intergenic 5b 36546 CEU:1.0;0.949, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs12045339 chr1 156294211 Intron 6 38755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12563631 chr1 156258953 Intron 6 3497 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs10908494 chr1 156263097 Intron 6 7641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10908501 chr1 156285513 Intron 6 30057 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs10908499 chr1 156279176 Intron 6 23720 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12037778 chr1 156284864 Intron 7 29408 CEU:1.0;1.0, CHB:1.0;0.851, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs12027741 chr1 156248148 Intron 7 7308 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs2296375 chr1 156309372 Intron 7 53916 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs12139321 chr1 156230429 Intron 7 25027 CEU:1.0;0.949, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs12117947 chr1 156244058 Intron 7 11398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12122180 chr1 156244559 Intron 7 10897 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs12132919 chr1 156318141 Intergenic 7 62685 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs12038481 chr1 156284815 Intron 7 29359 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs2270291 chr1 156244992 Intron 7 10464 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10908502 chr1 156300082 Intron 7 44626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12027103 chr1 156244856 Intron 7 10600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs10494304 chr1 156285764 Intron 7 30308 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10752615 chr1 156248609 Intron 7 6847 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 LEAD_SNP rs12566888 chr1 156869047 Intron 5b ASSOCIATION 20526338 Platelet aggregation 18.3010299957 PEAR1 ASSOCIATION 20526338 Platelet aggregation 15.3979400087 PEAR1 FUNCTIONAL_SNP rs12041331 chr1 156869714 Intron 5b 667 CEU:1.0;1.0, CHB:0.88;0.732, JPT:0.947;0.814 LEAD_SNP rs6427356 chr1 157130566 Intergenic 6 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.09691001301 CYCSP52 - FCRL5 FUNCTIONAL_SNP rs6661210 chr1 157132388 Intergenic 4 1822 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.92 FUNCTIONAL_SNP rs11264624 chr1 157127118 Intergenic 7 3448 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.803 FUNCTIONAL_SNP rs11264625 chr1 157128705 Intergenic 7 1861 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2779116 chr1 158585415 Intron 6 ASSOCIATION 20858683 Glycated hemoglobin levels 8.52287874528 SPTA1 LEAD_SNP rs857721 chr1 158612548 Intron 7 ASSOCIATION 19862010 Other erythrocyte phenotypes 10.0 SPTA1 FUNCTIONAL_SNP rs16840314 chr1 158517353 Coding 6 95195 CEU:1.0;0.858, JPT:0.808;0.584 FUNCTIONAL_SNP rs857685 chr1 158577109 Coding 7 35439 CEU:1.0;1.0, CHB:1.0;0.829, JPT:0.887;0.788, YRI:1.0;0.849 FUNCTIONAL_SNP rs2518493 chr1 158631171 Coding 7 18623 CEU:0.9;0.81, CHB:0.881;0.666, JPT:0.86;0.588 FUNCTIONAL_SNP rs857725 chr1 158607935 Coding 6 4613 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.763 FUNCTIONAL_SNP rs863343 chr1 158534385 Intergenic 5b 78163 CEU:1.0;0.847, JPT:0.798;0.568 FUNCTIONAL_SNP rs950488 chr1 158459975 Intron 6 152573 CEU:1.0;0.813, JPT:0.796;0.536 FUNCTIONAL_SNP rs857684 chr1 158575729 Intron 6 36819 CEU:1.0;1.0, CHB:1.0;0.829, JPT:0.887;0.788 FUNCTIONAL_SNP rs860772 chr1 158576100 Intron 6 36448 CEU:1.0;1.0, CHB:1.0;0.829, JPT:0.887;0.788, YRI:0.845;0.619 FUNCTIONAL_SNP rs863344 chr1 158534831 Intergenic 6 77717 CEU:1.0;0.858, JPT:0.808;0.584 FUNCTIONAL_SNP rs2157691 chr1 158582838 Intron 6 29710 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.895 FUNCTIONAL_SNP rs11265022 chr1 158512619 Intergenic 6 99929 CEU:1.0;0.858, JPT:0.789;0.522 FUNCTIONAL_SNP rs2518491 chr1 158585230 Intron 7 27318 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.946, YRI:1.0;0.849 FUNCTIONAL_SNP rs12042917 chr1 158529661 Intergenic 7 82887 CEU:1.0;0.858, CHB:0.777;0.522, JPT:0.867;0.635 FUNCTIONAL_SNP rs2246434 chr1 158618455 Intron 7 5907 CEU:0.949;0.856, CHB:1.0;0.825, JPT:0.922;0.599 FUNCTIONAL_SNP rs863327 chr1 158620647 Intron 7 8099 CEU:0.901;0.811, CHB:0.884;0.645, JPT:0.86;0.588 FUNCTIONAL_SNP rs861409 chr1 158620477 Intron 7 7929 CEU:0.901;0.811, CHB:0.884;0.645, JPT:0.86;0.588 FUNCTIONAL_SNP rs11264980 chr1 158453439 Intron 7 159109 CEU:1.0;0.813, JPT:0.796;0.536 FUNCTIONAL_SNP rs2479868 chr1 158580069 Intergenic 7 32479 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.946 FUNCTIONAL_SNP rs2318119 chr1 158569874 Intron 7 42674 CEU:1.0;1.0, CHB:1.0;0.829, JPT:0.887;0.788 FUNCTIONAL_SNP rs2022003 chr1 158586966 Intron 7 25582 CEU:1.0;0.952, CHB:1.0;0.954, JPT:1.0;0.946 LEAD_SNP rs1772408 chr1 159005649 Intron 6 ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 6.09691001301 IFI16 FUNCTIONAL_SNP rs1057027 chr1 159002377 Coding 7 3272 CEU:1.0;1.0 FUNCTIONAL_SNP rs1057028 chr1 159002389 Coding 7 3260 CEU:1.0;1.0 FUNCTIONAL_SNP rs12124059 chr1 159026639 Intergenic 5b 20990 CEU:1.0;1.0, JPT:1.0;0.673 FUNCTIONAL_SNP rs1772405 chr1 159010001 Intron 5b 4352 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.927 FUNCTIONAL_SNP rs1101993 chr1 158996895 Intron 5b 8754 CEU:0.934;0.818 FUNCTIONAL_SNP rs2106095 chr1 159000259 Intron 5b 5390 CEU:0.934;0.819 FUNCTIONAL_SNP rs1633265 chr1 159005727 Intron 6 78 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1101995 chr1 158997479 Intron 6 8170 CEU:0.93;0.809 FUNCTIONAL_SNP rs855865 chr1 159028378 Intergenic 6 22729 CEU:1.0;1.0, JPT:1.0;0.673 FUNCTIONAL_SNP rs855866 chr1 159052720 Intergenic 6 47071 CEU:1.0;0.826, CHB:0.938;0.747, JPT:0.877;0.77 FUNCTIONAL_SNP rs856058 chr1 159002155 Intron 6 3494 CEU:1.0;1.0 FUNCTIONAL_SNP rs1772415 chr1 159002778 Intron 6 2871 CEU:1.0;1.0 FUNCTIONAL_SNP rs861318 chr1 159002222 Intron 7 3427 CEU:1.0;1.0 FUNCTIONAL_SNP rs12094741 chr1 158998665 Intron 7 6984 CEU:0.934;0.819 FUNCTIONAL_SNP rs1101991 chr1 158993268 Intron 7 12381 CEU:0.934;0.819 FUNCTIONAL_SNP rs1101998 chr1 158999284 Intron 7 6365 CEU:0.934;0.819 FUNCTIONAL_SNP rs12093523 chr1 158998120 Intron 7 7529 CEU:0.934;0.819 FUNCTIONAL_SNP rs2570916 chr1 159012646 Intron 7 6997 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1614182 chr1 159004526 Intron 7 1123 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs1633256 chr1 159002557 Intron 7 3092 CEU:1.0;1.0 FUNCTIONAL_SNP rs11265133 chr1 158995448 Intron 7 10201 CEU:0.934;0.819 FUNCTIONAL_SNP rs856052 chr1 159001424 Intron 7 4225 CEU:1.0;1.0 FUNCTIONAL_SNP rs856053 chr1 159001504 Intron 7 4145 CEU:1.0;1.0 FUNCTIONAL_SNP rs856054 chr1 159001521 Intron 7 4128 CEU:1.0;0.911, CHB:1.0;0.548, JPT:1.0;0.579 FUNCTIONAL_SNP rs856055 chr1 159001593 Intron 7 4056 CEU:1.0;0.93 FUNCTIONAL_SNP rs1772414 chr1 159002907 Intron 7 2742 CEU:1.0;1.0, YRI:0.95;0.562 LEAD_SNP rs1474747 chr1 159148513 Intron 7 ASSOCIATION 17903293 Select biomarker traits 5.52287874528 CADM3 LEAD_SNP rs2814778 chr1 159174683 Exon,non-coding 2a ASSOCIATION 21507922 Neutrophil count 8.0 DARC LEAD_SNP rs10489849 chr1 159196765 Intergenic 6 ASSOCIATION 17903293 Select biomarker traits 6.0 DARC - MPTX LEAD_SNP rs2251746 chr1 159272060 Intron 5a ASSOCIATION 18846228 Serum IgE levels 19.6989700043 FCER1A LEAD_SNP rs2494250 chr1 159278251 Intergenic 7 ASSOCIATION 17903293 Select biomarker traits 14.0 FCER1A FUNCTIONAL_SNP rs2427828 chr1 159273041 Intron 5b 5210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2427824 chr1 159265062 Intron 6 13189 CEU:1.0;0.949, CHB:1.0;0.818, JPT:1.0;0.841, YRI:1.0;1.0 FUNCTIONAL_SNP rs2494265 chr1 159275274 Intron 6 2977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2427825 chr1 159266066 Intron 7 12185 CEU:1.0;1.0, CHB:1.0;0.819, JPT:1.0;0.842, YRI:1.0;1.0 LEAD_SNP rs6687840 chr1 159342439 Intron 6 ASSOCIATION 20237162 Plasma chemerin levels 5.15490195999 OR10J8P - OR10J9P FUNCTIONAL_SNP rs4400605 chr1 159340416 Intron 6 2023 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4517343 chr1 159339006 Intron 6 3433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4446959 chr1 159357684 Intron 6 15245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10908713 chr1 159339559 Intron 7 2880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6677678 chr1 159339520 Intron 7 2919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4537549 chr1 159339036 Intron 7 3403 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4446959 chr1 159357684 Intron 6 ASSOCIATION 20237162 Plasma chemerin levels 5.09691001301 OR10J8P - OR10J9P FUNCTIONAL_SNP rs4400605 chr1 159340416 Intron 6 17268 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4517343 chr1 159339006 Intron 6 18678 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6687840 chr1 159342439 Intron 6 15245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10908713 chr1 159339559 Intron 7 18125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6677678 chr1 159339520 Intron 7 18164 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4537549 chr1 159339036 Intron 7 18648 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4128725 chr1 159405959 Intron 6 ASSOCIATION 17903293 Select biomarker traits 11.3979400087 OR10J4 - OR10J1 FUNCTIONAL_SNP rs12118628 chr1 159409884 Coding 6 3925 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4492615 chr1 159391863 Intron 4 14096 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11265186 chr1 159375903 Intron 5a 30056 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10908716 chr1 159376343 Intron 5a 29616 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10908717 chr1 159376352 Intron 5a 29607 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4399156 chr1 159338072 Intron 5b 67887 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11265180 chr1 159343648 Intron 6 62311 CEU:1.0;0.828, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4656237 chr1 159413824 Intron 6 7865 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4290055 chr1 159352971 Intron 7 52988 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11265187 chr1 159378594 Intron 7 27365 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;1.0 FUNCTIONAL_SNP rs12145616 chr1 159409479 Intron 7 3520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12142553 chr1 159341672 Intron 7 64287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11265193 chr1 159401656 Intron 7 4303 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4133289 chr1 159453937 Intergenic 7 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 6.69897000434 OR10J1 - OR10J5 LEAD_SNP rs12093699 chr1 159647988 Intergenic 5a ASSOCIATION 18464913 Protein quantitative trait loci 5.22184874962 OR10J6P - CRPP1 LEAD_SNP rs876537 chr1 159674933 Intergenic 5b ASSOCIATION 21647738 C-reactive protein 9.0 CRPP1 FUNCTIONAL_SNP rs2808624 chr1 159665921 Intergenic 7 9012 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11265257 chr1 159668984 Intergenic 7 5949 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2794520 chr1 159678816 Intergenic 7 ASSOCIATION 21300955 C-reactive protein 185.698970004 CRPP1 - CRP ASSOCIATION 19060910 Other metabolic traits 21.5228787453 CRPP1 - CRP ASSOCIATION 17903293 Select biomarker traits 7.52287874528 CRPP1 - CRP FUNCTIONAL_SNP rs1205 chr1 159682233 Exon,non-coding 4 3417 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.766 FUNCTIONAL_SNP rs2808628 chr1 159676011 Intergenic 5b 2805 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7553007 chr1 159698549 Intergenic 5b 19733 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs2808629 chr1 159676796 Intergenic 7 2020 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.766 FUNCTIONAL_SNP rs2027471 chr1 159689388 Intergenic 7 10572 CEU:1.0;0.957, CHB:1.0;0.865, JPT:1.0;0.941, YRI:1.0;1.0 FUNCTIONAL_SNP rs1341665 chr1 159691559 Intergenic 7 12743 CEU:1.0;1.0, CHB:1.0;0.865, JPT:1.0;0.941, YRI:1.0;1.0 LEAD_SNP rs2808630 chr1 159680868 Intergenic 7 ASSOCIATION 18385676 Lung cancer 5.15490195999 CRPP1 - CRP LEAD_SNP rs3091244 chr1 159684665 Intergenic 7 ASSOCIATION 18439548 C-reactive protein 27.2218487496 CRP LEAD_SNP rs3093059 chr1 159685136 Intergenic 7 ASSOCIATION 21196492 C-reactive protein 20.3979400087 CRP FUNCTIONAL_SNP rs3093077 chr1 159679636 Intergenic 7 5500 CEU:1.0;1.0, CHB:1.0;0.811, JPT:1.0;1.0, YRI:1.0;0.851 LEAD_SNP rs7553007 chr1 159698549 Intergenic 5b ASSOCIATION 19567438 C-reactive protein 43.096910013 CRP - RPL27P2 FUNCTIONAL_SNP rs1205 chr1 159682233 Exon,non-coding 4 16316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.681 FUNCTIONAL_SNP rs2808628 chr1 159676011 Intergenic 5b 22538 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs2794520 chr1 159678816 Intergenic 7 19733 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs2808629 chr1 159676796 Intergenic 7 21753 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.681 FUNCTIONAL_SNP rs2027471 chr1 159689388 Intergenic 7 9161 CEU:1.0;0.957, CHB:1.0;0.865, JPT:1.0;0.941, YRI:1.0;0.889 FUNCTIONAL_SNP rs1341665 chr1 159691559 Intergenic 7 6990 CEU:1.0;1.0, CHB:1.0;0.865, JPT:1.0;0.941, YRI:1.0;0.889 LEAD_SNP rs11265260 chr1 159700039 Intergenic 6 ASSOCIATION 18439552 C-reactive protein 5.15490195999 CRP - RPL27P2 LEAD_SNP rs11265263 chr1 159710517 Intergenic 7 ASSOCIATION 21396408 Vaccine-related adverse events 5.52287874528 CRP - RPL27P2 FUNCTIONAL_SNP rs1800947 chr1 159683438 Coding 7 27079 CEU:1.0;1.0 LEAD_SNP rs4233356 chr1 159753183 Intergenic 6 ASSOCIATION 21787189 Interstitial lung disease 5.04575749056 DUSP23 - FCRL6 LEAD_SNP rs16832015 chr1 160421916 Intergenic 4 ASSOCIATION 19734545 Cognitive performance 5.69897000434 VANGL2 - SLAMF6 LEAD_SNP rs2274910 chr1 160852046 Intron 5b ASSOCIATION 18587394 Crohn's disease 9.0 ITLN1 FUNCTIONAL_SNP rs4656953 chr1 160845842 Intergenic 5a 6204 CEU:1.0;1.0, CHB:1.0;0.89, JPT:1.0;1.0, YRI:0.953;0.868 FUNCTIONAL_SNP rs3766356 chr1 160848937 Intron 5b 3109 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs2274905 chr1 160849367 Intron 7 2679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 LEAD_SNP rs10800309 chr1 161472158 Intergenic 7 ASSOCIATION 20228799 Ulcerative colitis 8.52287874528 C1orf192 - FCGR2A LEAD_SNP rs1801274 chr1 161479745 Coding 7 ASSOCIATION 21297633 Ulcerative colitis 19.6989700043 FCGR2A ASSOCIATION 19915573 Ulcerative colitis 11.6989700043 FCGR2A FUNCTIONAL_SNP rs6671847 chr1 161478810 Intron 6 935 CEU:0.958;0.848, CHB:0.945;0.893, JPT:1.0;0.767 FUNCTIONAL_SNP rs12139150 chr1 161470505 Intergenic 7 9240 CEU:0.959;0.851, CHB:0.929;0.646, JPT:1.0;0.552 FUNCTIONAL_SNP rs7551957 chr1 161470042 Intergenic 7 9703 CEU:0.958;0.848, CHB:0.931;0.656, JPT:1.0;0.552 LEAD_SNP rs10918270 chr1 161915501 Intron 5a ASSOCIATION 19772629 Parkinson's disease (age of onset) 5.09691001301 ATF6 FUNCTIONAL_SNP rs3795649 chr1 161931562 Exon,non-coding 7 16061 CEU:1.0;1.0, CHB:1.0;0.648, JPT:1.0;0.57, YRI:1.0;0.659 FUNCTIONAL_SNP rs10800175 chr1 161938416 Intergenic 5b 22915 CEU:1.0;0.857, CHB:1.0;0.644, JPT:1.0;0.592 FUNCTIONAL_SNP rs9783069 chr1 161936121 Intergenic 5b 20620 CEU:1.0;0.96, CHB:1.0;0.648, JPT:1.0;0.57, YRI:1.0;0.659 FUNCTIONAL_SNP rs10918321 chr1 161939222 Intergenic 5b 23721 CEU:1.0;0.857, CHB:1.0;0.644, JPT:1.0;0.548 FUNCTIONAL_SNP rs9783050 chr1 161936020 Intergenic 5b 20519 CEU:1.0;0.962, CHB:1.0;0.682, JPT:1.0;0.635, YRI:1.0;0.652 FUNCTIONAL_SNP rs2340723 chr1 161940254 Intergenic 5b 24753 CEU:1.0;0.825, CHB:1.0;0.644 FUNCTIONAL_SNP rs2341471 chr1 161924749 Intron 7 9248 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.659 LEAD_SNP rs2880058 chr1 162014632 Intergenic 5b ASSOCIATION 20031603 QT interval 9.69897000434 OLFML2B - NOS1AP FUNCTIONAL_SNP rs7547308 chr1 162027992 Intergenic 3a 13360 CEU:1.0;0.952, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10800279 chr1 162038278 Intergenic 5a 23646 CEU:0.946;0.809, JPT:1.0;0.515 FUNCTIONAL_SNP rs7524369 chr1 162030995 Intergenic 5b 16363 CEU:0.95;0.903, CHB:1.0;0.526, JPT:1.0;0.515 FUNCTIONAL_SNP rs7546009 chr1 162030901 Intergenic 5b 16269 CEU:0.95;0.903, CHB:1.0;0.526, JPT:1.0;0.515 FUNCTIONAL_SNP rs12084981 chr1 162034982 Intergenic 5b 20350 CEU:0.945;0.806, CHB:1.0;0.55 FUNCTIONAL_SNP rs10918590 chr1 162029966 Intergenic 5b 15334 CEU:1.0;0.948, CHB:1.0;0.503 FUNCTIONAL_SNP rs10918593 chr1 162030654 Intergenic 5b 16022 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6702936 chr1 162037159 Intergenic 5b 22527 CEU:0.946;0.809, JPT:1.0;0.515 FUNCTIONAL_SNP rs10753746 chr1 162037856 Intergenic 5b 23224 CEU:0.946;0.809, JPT:1.0;0.515 FUNCTIONAL_SNP rs10918595 chr1 162031465 Intergenic 6 16833 CEU:0.945;0.808, CHB:1.0;0.56, JPT:1.0;0.507 FUNCTIONAL_SNP rs10918602 chr1 162037700 Intergenic 6 23068 CEU:0.946;0.809 FUNCTIONAL_SNP rs4657139 chr1 162029907 Intergenic 6 15275 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12567211 chr1 162036523 Intergenic 7 21891 CEU:0.946;0.809, JPT:1.0;0.566 FUNCTIONAL_SNP rs6659759 chr1 162037609 Intergenic 7 22977 CEU:0.938;0.829, CHB:1.0;0.525 FUNCTIONAL_SNP rs16827673 chr1 162036704 Intergenic 7 22072 CEU:0.945;0.806, CHB:1.0;0.508 FUNCTIONAL_SNP rs10918588 chr1 162029053 Intergenic 7 14421 CEU:1.0;1.0 FUNCTIONAL_SNP rs10918591 chr1 162030241 Intergenic 7 15609 CEU:0.95;0.903, CHB:1.0;0.526, JPT:1.0;0.515 FUNCTIONAL_SNP rs7550692 chr1 162029291 Intergenic 7 14659 CEU:0.95;0.903, CHB:1.0;0.533 LEAD_SNP rs12143842 chr1 162033890 Intergenic 2b ASSOCIATION 19587794 QT interval 83.0 OLFML2B - NOS1AP ASSOCIATION 19305408 QT interval 77.6989700043 OLFML2B - NOS1AP ASSOCIATION 19305409 QT interval 77.6989700043 OLFML2B - NOS1AP FUNCTIONAL_SNP rs16847548 chr1 162035274 Intergenic 4 1384 CEU:1.0;0.837, CHB:1.0;0.817, JPT:1.0;0.865 FUNCTIONAL_SNP rs12036340 chr1 162015740 Intergenic 7 18150 CEU:1.0;0.922, CHB:0.947;0.897, JPT:1.0;1.0 LEAD_SNP rs1415259 chr1 162085309 Intron 7 ASSOCIATION 20062061 Electrocardiographic traits 9.15490195999 NOS1AP FUNCTIONAL_SNP rs1415257 chr1 162062044 Intron 4 23265 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs4657150 chr1 162102064 Intron 4 16755 CEU:0.914;0.801, CHB:1.0;0.819, JPT:1.0;1.0 FUNCTIONAL_SNP rs10494366 chr1 162085685 Intron 5b 376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10918671 chr1 162067299 Intron 6 18010 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs1572498 chr1 162084886 Intron 6 423 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs885148 chr1 162101098 Intron 6 15789 CEU:0.914;0.801, CHB:1.0;0.819, JPT:1.0;1.0 FUNCTIONAL_SNP rs3922867 chr1 162082749 Intron 6 2560 CEU:1.0;1.0 FUNCTIONAL_SNP rs11579850 chr1 162067222 Intron 6 18087 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs10800311 chr1 162086111 Intron 6 802 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12144992 chr1 162103110 Intron 6 17801 CEU:0.914;0.801, CHB:1.0;0.819, JPT:1.0;1.0 FUNCTIONAL_SNP rs2095626 chr1 162075932 Intron 7 9377 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10800303 chr1 162075433 Intron 7 9876 CEU:0.956;0.876, CHB:0.948;0.898, JPT:1.0;1.0 FUNCTIONAL_SNP rs2225845 chr1 162095605 Intron 7 10296 CEU:0.914;0.801, CHB:1.0;0.812, JPT:1.0;1.0, YRI:0.899;0.522 FUNCTIONAL_SNP rs7548169 chr1 162094732 Intron 7 9423 CEU:0.914;0.801, CHB:1.0;0.819, JPT:1.0;1.0 FUNCTIONAL_SNP rs7521236 chr1 162075321 Intron 7 9988 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs7551959 chr1 162062568 Intron 7 22741 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs1415260 chr1 162085147 Intron 7 162 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12733821 chr1 162086691 Intron 7 1382 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6672881 chr1 162077101 Intron 7 8208 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs4657140 chr1 162061265 Intron 7 24044 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs10918740 chr1 162113887 Intron 7 28578 CEU:0.914;0.801, CHB:1.0;0.778, JPT:1.0;0.944 LEAD_SNP rs10494366 chr1 162085685 Intron 5b ASSOCIATION 20062063 Electrocardiographic traits 21.3010299957 NOS1AP ASSOCIATION 16648850 QT interval 10.0 NOS1AP FUNCTIONAL_SNP rs1415257 chr1 162062044 Intron 4 23641 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs4657150 chr1 162102064 Intron 4 16379 CEU:0.914;0.801, CHB:1.0;0.819, JPT:1.0;1.0 FUNCTIONAL_SNP rs10918671 chr1 162067299 Intron 6 18386 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs1572498 chr1 162084886 Intron 6 799 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs885148 chr1 162101098 Intron 6 15413 CEU:0.914;0.801, CHB:1.0;0.819, JPT:1.0;1.0 FUNCTIONAL_SNP rs3922867 chr1 162082749 Intron 6 2936 CEU:1.0;1.0 FUNCTIONAL_SNP rs11579850 chr1 162067222 Intron 6 18463 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs10800311 chr1 162086111 Intron 6 426 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12144992 chr1 162103110 Intron 6 17425 CEU:0.914;0.801, CHB:1.0;0.819, JPT:1.0;1.0 FUNCTIONAL_SNP rs2095626 chr1 162075932 Intron 7 9753 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10800303 chr1 162075433 Intron 7 10252 CEU:0.956;0.876, CHB:0.948;0.898, JPT:1.0;1.0 FUNCTIONAL_SNP rs2225845 chr1 162095605 Intron 7 9920 CEU:0.914;0.801, CHB:1.0;0.812, JPT:1.0;1.0, YRI:0.899;0.522 FUNCTIONAL_SNP rs7548169 chr1 162094732 Intron 7 9047 CEU:0.914;0.801, CHB:1.0;0.819, JPT:1.0;1.0 FUNCTIONAL_SNP rs7521236 chr1 162075321 Intron 7 10364 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs7551959 chr1 162062568 Intron 7 23117 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs1415259 chr1 162085309 Intron 7 376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1415260 chr1 162085147 Intron 7 538 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12733821 chr1 162086691 Intron 7 1006 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6672881 chr1 162077101 Intron 7 8584 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs4657140 chr1 162061265 Intron 7 24420 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs10918740 chr1 162113887 Intron 7 28202 CEU:0.914;0.801, CHB:1.0;0.778, JPT:1.0;0.944 LEAD_SNP rs16857031 chr1 162112910 Intron 5b ASSOCIATION 19305408 QT interval 34.0 NOS1AP LEAD_SNP rs12029454 chr1 162133117 Intron 6 ASSOCIATION 19305408 QT interval 44.5228787453 NOS1AP FUNCTIONAL_SNP rs10127719 chr1 162156170 Intron 6 23053 CEU:1.0;0.899, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs7534004 chr1 162146709 Intron 7 13592 CEU:1.0;0.899, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4657178 chr1 162210610 Intron 3a ASSOCIATION 19305409 QT interval 32.15490196 NOS1AP FUNCTIONAL_SNP rs6427665 chr1 162214762 Intron 6 4152 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.957 LEAD_SNP rs6670655 chr1 164739171 Exon,non-coding 4 ASSOCIATION 20966902 Height 5.52287874528 PBX1 LEAD_SNP rs1532815 chr1 165180089 Exon,non-coding 7 ASSOCIATION 21177773 Response to acetaminophen (hepatotoxicity) 6.22184874962 LMX1A FUNCTIONAL_SNP rs4657412 chr1 165177033 Intron 5a 3056 CEU:1.0;0.903, CHB:1.0;0.875, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs16841013 chr1 165174959 Intron 6 5130 CEU:1.0;0.904, CHB:1.0;0.552, JPT:1.0;0.502 FUNCTIONAL_SNP rs1354510 chr1 165175515 Intron 7 4574 CEU:1.0;0.904, CHB:1.0;0.526, JPT:1.0;0.51 LEAD_SNP rs466639 chr1 165394882 Intron 7 ASSOCIATION 21102462 Menarche (age at onset) 13.0 RXRG FUNCTIONAL_SNP rs157863 chr1 165383403 Intron 6 11479 CEU:1.0;0.837, CHB:1.0;0.505, YRI:0.832;0.623 FUNCTIONAL_SNP rs157879 chr1 165398844 Intron 6 3962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs188196 chr1 165384621 Intron 7 10261 CEU:1.0;0.837 FUNCTIONAL_SNP rs157864 chr1 165383761 Intron 7 11121 CEU:1.0;0.847, CHB:1.0;0.642, YRI:0.835;0.628 FUNCTIONAL_SNP rs3767342 chr1 165387665 Intron 7 7217 CEU:1.0;0.838, CHB:1.0;0.731, JPT:1.0;0.504, YRI:0.945;0.803 LEAD_SNP rs285480 chr1 165403903 Intron 5b ASSOCIATION 21368711 Personality dimensions 6.39794000867 RXRG FUNCTIONAL_SNP rs1123944 chr1 165406865 Intron 5b 2962 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs455696 chr1 165406087 Intron 7 2184 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10800098 chr1 165409095 Intron 5b ASSOCIATION 19754311 AIDS 5.39794000867 RXRG FUNCTIONAL_SNP rs12069160 chr1 165381666 Intron 7 27429 CEU:1.0;0.848, CHB:0.895;0.762, JPT:0.794;0.558 FUNCTIONAL_SNP rs3767341 chr1 165379231 Intron 7 29864 CEU:1.0;0.848 FUNCTIONAL_SNP rs4657438 chr1 165399539 Intron 7 9556 CEU:1.0;0.824 LEAD_SNP rs6686643 chr1 165616588 Exon,non-coding 7 ASSOCIATION 21116278 Total ventricular volume 5.15490195999 MGST3 FUNCTIONAL_SNP rs959617 chr1 165616881 Exon,non-coding 4 293 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs957644 chr1 165616157 Exon,non-coding 7 431 CEU:1.0;0.902, CHB:1.0;0.79, YRI:1.0;1.0 FUNCTIONAL_SNP rs9333471 chr1 165619712 Intron 6 3124 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4656461 chr1 165687205 Intergenic 4 ASSOCIATION 21532571 Glaucoma 13.2218487496 RPL21P27 - TMCO1 FUNCTIONAL_SNP rs2790052 chr1 165738463 Exon,non-coding 4 51258 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1547725 chr1 165670958 Exon,non-coding 6 16247 CEU:1.0;0.913, JPT:1.0;1.0 FUNCTIONAL_SNP rs2251768 chr1 165738311 Exon,non-coding 4 51106 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2790053 chr1 165737704 Intron 4 50499 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6660601 chr1 165695855 Intergenic 5a 8650 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6426936 chr1 165684707 Intergenic 5b 2498 CEU:1.0;0.913, JPT:1.0;1.0 FUNCTIONAL_SNP rs6696454 chr1 165707923 Intron 6 20718 CEU:1.0;1.0 FUNCTIONAL_SNP rs2814471 chr1 165739598 Intron 6 52393 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7555523 chr1 165718979 Intron 6 31774 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7524755 chr1 165694897 Intergenic 7 7692 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4657476 chr1 165732661 Intron 7 45456 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4657477 chr1 165736175 Intron 7 48970 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7518099 chr1 165736880 Intron 7 49675 CEU:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4657482 chr1 165831649 Intron 4 ASSOCIATION 19483681 Testicular germ cell tumor 5.69897000434 UCK2 FUNCTIONAL_SNP rs4657487 chr1 165835364 Intron 4 3715 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;1.0, YRI:0.94;0.835 LEAD_SNP rs9803659 chr1 167156500 Intron 6 ASSOCIATION 18940312 Plasma levels of liver enzymes 5.39794000867 RPS17P6 - POU2F1 FUNCTIONAL_SNP rs12117127 chr1 167155882 Intron 5b 618 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9803661 chr1 167156998 Intron 6 498 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6427070 chr1 167154224 Intron 6 2276 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6671443 chr1 167158104 Intron 6 1604 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs10918659 chr1 167157053 Intron 7 553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4425968 chr1 167153763 Intron 7 2737 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 LEAD_SNP rs840016 chr1 167408670 Intron 4 ASSOCIATION 20453842 Rheumatoid arthritis 5.69897000434 CD247 FUNCTIONAL_SNP rs864537 chr1 167411384 Intron 4 2714 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1723023 chr1 167405132 Intron 5b 3538 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;0.743 LEAD_SNP rs864537 chr1 167411384 Intron 4 ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 10.6989700043 CD247 ASSOCIATION 20190752 Celiac disease 6.39794000867 CD247 FUNCTIONAL_SNP rs840016 chr1 167408670 Intron 4 2714 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1723023 chr1 167405132 Intron 5b 6252 CEU:1.0;1.0, YRI:1.0;0.743 LEAD_SNP rs2056626 chr1 167420425 Intron 7 ASSOCIATION 21750679 Systemic sclerosis 6.0 CD247 ASSOCIATION 20383147 Systemic sclerosis 8.52287874528 CD247 FUNCTIONAL_SNP rs1214595 chr1 167427557 Intron 2b 7132 CEU:1.0;0.882, CHB:1.0;0.673 FUNCTIONAL_SNP rs1723018 chr1 167433420 Intron 3a 12995 CEU:1.0;0.959, CHB:1.0;0.673 FUNCTIONAL_SNP rs1723016 chr1 167433056 Intron 4 12631 CEU:1.0;0.959, CHB:1.0;0.673 FUNCTIONAL_SNP rs1773542 chr1 167432949 Intron 5a 12524 CEU:1.0;0.959, CHB:1.0;0.673 FUNCTIONAL_SNP rs1214598 chr1 167426424 Intron 5b 5999 CEU:1.0;0.809, CHB:1.0;0.57 FUNCTIONAL_SNP rs1214596 chr1 167427170 Intron 6 6745 CEU:1.0;0.882, CHB:1.0;0.673 FUNCTIONAL_SNP rs2995091 chr1 167434277 Intron 6 13852 CEU:1.0;0.882, CHB:1.0;0.67 FUNCTIONAL_SNP rs2995089 chr1 167431193 Intron 7 10768 CEU:1.0;0.882, CHB:1.0;0.673 FUNCTIONAL_SNP rs2988277 chr1 167431352 Intron 7 10927 CEU:1.0;0.882, CHB:1.0;0.673 FUNCTIONAL_SNP rs1773560 chr1 167421763 Intron 7 1338 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3108155 chr1 167422057 Intron 7 1632 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1412337 chr1 168618641 Intergenic 7 ASSOCIATION 17903295 Morbidity-free survival 8.69897000434 RPL7AP21 - DPT LEAD_SNP rs10919071 chr1 169099483 Intron 6 ASSOCIATION 19305409 QT interval 15.0 ATP1B1 LEAD_SNP rs16861990 chr1 169135127 Intron 7 ASSOCIATION 21502573 D-dimer levels 5.69897000434 NME7 FUNCTIONAL_SNP rs1208327 chr1 169296864 Intron 5a 161737 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs6687813 chr1 169477574 Intergenic 7 ASSOCIATION 21502573 D-dimer levels 13.6989700043 SLC19A2 - F5 FUNCTIONAL_SNP rs2420372 chr1 169498056 Intron 4 20482 CEU:1.0;0.847 FUNCTIONAL_SNP rs6009 chr1 169498834 Intron 4 21260 CEU:1.0;0.865 FUNCTIONAL_SNP rs6427194 chr1 169481121 Intergenic 4 3547 CEU:1.0;0.865, YRI:1.0;0.523 FUNCTIONAL_SNP rs6427195 chr1 169481176 Intergenic 4 3602 CEU:1.0;0.865, YRI:1.0;0.523 FUNCTIONAL_SNP rs6427196 chr1 169481223 Intergenic 4 3649 CEU:1.0;1.0, YRI:1.0;0.516 FUNCTIONAL_SNP rs10737547 chr1 169476052 Intergenic 5b 1522 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2420371 chr1 169491555 Intron 6 13981 CEU:1.0;0.848 FUNCTIONAL_SNP rs1018827 chr1 169514006 Intron 7 36432 CEU:1.0;0.865, YRI:1.0;1.0 FUNCTIONAL_SNP rs2420370 chr1 169490392 Intron 7 12818 CEU:1.0;0.865 FUNCTIONAL_SNP rs970740 chr1 169479974 Intergenic 7 2400 CEU:1.0;0.865 FUNCTIONAL_SNP rs6427197 chr1 169500590 Intron 7 23016 CEU:1.0;0.865, YRI:1.0;1.0 LEAD_SNP rs6136 chr1 169563951 Coding 4 ASSOCIATION 20167578 Soluble levels of adhesion molecules 60.3979400087 SELP FUNCTIONAL_SNP rs9332575 chr1 169527101 Intron 6 36850 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs2235302 chr1 169580290 Intron 2c ASSOCIATION 20167578 Soluble levels of adhesion molecules 15.3979400087 SELP FUNCTIONAL_SNP rs2236868 chr1 169583996 Intron 7 3706 CEU:1.0;0.961, CHB:0.925;0.856, JPT:1.0;1.0 LEAD_SNP rs1569476 chr1 169608917 Intergenic 5b ASSOCIATION 21116278 Total ventricular volume 6.52287874528 SELP - SELL FUNCTIONAL_SNP rs1800805 chr1 169601281 Intergenic 6 7636 CEU:0.96;0.921, CHB:1.0;0.93, JPT:1.0;0.933 FUNCTIONAL_SNP rs3917682 chr1 169591548 Intron 7 17369 CEU:0.96;0.921, CHB:1.0;0.933, JPT:1.0;0.868 LEAD_SNP rs1541160 chr1 169995802 Intron 7 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 7.69897000434 KIFAP3 LEAD_SNP rs6660565 chr1 171261193 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 5.69897000434 FMO1 - FMO4 FUNCTIONAL_SNP rs10912675 chr1 171227216 Exon,non-coding 5a 33977 CEU:1.0;0.878, CHB:0.845;0.664, JPT:0.869;0.673, YRI:0.882;0.777 FUNCTIONAL_SNP rs10912694 chr1 171236223 Exon,non-coding 4 24970 CEU:1.0;0.918, CHB:0.846;0.666, JPT:1.0;0.737, YRI:1.0;0.942 FUNCTIONAL_SNP rs7877 chr1 171254890 Exon,non-coding 7 6303 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.945, YRI:1.0;0.942 FUNCTIONAL_SNP rs10798304 chr1 171258642 Intergenic 5b 2551 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs2284129 chr1 171294643 Intron 7 33450 CEU:1.0;1.0, YRI:1.0;0.886 LEAD_SNP rs10914144 chr1 171949750 Intron 6 ASSOCIATION 19820697 Mean platelet volume 13.6989700043 DNM3 FUNCTIONAL_SNP rs2038479 chr1 171939290 Intron 5a 10460 CEU:1.0;0.933, CHB:1.0;0.901, JPT:1.0;0.947 FUNCTIONAL_SNP rs10914053 chr1 171915181 Intron 7 34569 CEU:1.0;0.868 FUNCTIONAL_SNP rs6425521 chr1 171942783 Intron 7 6967 CEU:1.0;1.0, CHB:1.0;0.854, JPT:1.0;1.0, YRI:0.88;0.73 FUNCTIONAL_SNP rs10914127 chr1 171943948 Intron 7 5802 CEU:1.0;1.0, CHB:1.0;0.854, JPT:1.0;1.0, YRI:1.0;0.731 LEAD_SNP rs678962 chr1 172189889 Intron 6 ASSOCIATION 18391951 Height 7.52287874528 DNM3 LEAD_SNP rs1011731 chr1 172346548 Intron 7 ASSOCIATION 20935629 Waist-hip ratio 17.0 DNM3 FUNCTIONAL_SNP rs10752944 chr1 172363524 Exon,non-coding 2b 16976 CEU:0.961;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.792;0.52 FUNCTIONAL_SNP rs714515 chr1 172352990 Intron 2b 6442 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.899;0.808 FUNCTIONAL_SNP rs9425291 chr1 172312769 Intron 2b 33779 CEU:1.0;0.962, CHB:1.0;0.888, YRI:1.0;0.706 FUNCTIONAL_SNP rs2227198 chr1 172360164 Intron 4 13616 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.899;0.808 FUNCTIONAL_SNP rs2227199 chr1 172359780 Intron 5a 13232 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs9425592 chr1 172359116 Intron 5b 12568 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs9286854 chr1 172366806 Intron 5b 20258 CEU:0.961;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs991790 chr1 172340917 Intron 6 5631 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs2301453 chr1 172358167 Intron 7 11619 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs2001129 chr1 172333248 Intron 7 13300 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs7534393 chr1 172318031 Intron 7 28517 CEU:1.0;0.962, CHB:0.886;0.784, YRI:1.0;0.706 FUNCTIONAL_SNP rs2213732 chr1 172333595 Intron 7 12953 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.888;0.71 LEAD_SNP rs9286879 chr1 172862234 Intron 7 ASSOCIATION 18587394 Crohn's disease 8.69897000434 FASLG - TNFSF18 FUNCTIONAL_SNP rs2157453 chr1 172863948 Intron 4 1714 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs6699678 chr1 172863101 Intron 5b 867 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs10489276 chr1 172862939 Intron 5b 705 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs12021711 chr1 172861182 Intron 5b 1052 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs7527462 chr1 172862380 Intron 5b 146 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs12739009 chr1 172860035 Intron 6 2199 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.905 FUNCTIONAL_SNP rs2213745 chr1 172861759 Intron 6 475 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs2213742 chr1 172861574 Intron 7 660 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs4916285 chr1 172865492 Intron 7 3258 CEU:0.936;0.825, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12035082 chr1 172898377 Intron 4 ASSOCIATION 17554261 Crohn's disease 6.69897000434 FASLG - TNFSF18 FUNCTIONAL_SNP rs12037606 chr1 172898402 Intron 4 25 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10798242 chr1 172900586 Intron 7 2209 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs4145469 chr1 172874991 Intron 7 23386 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.855 FUNCTIONAL_SNP rs12407389 chr1 172892361 Intron 7 6016 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.925 LEAD_SNP rs2205960 chr1 173191475 Intergenic 4 ASSOCIATION 19838193 Systemic lupus erythematosus 31.5228787453 TNFSF4 - RPL26P11 LEAD_SNP rs1342038 chr1 173301516 Intron 2b ASSOCIATION 21441570 Diabetic retinopathy 5.39794000867 TNFSF4 - RPL26P11 FUNCTIONAL_SNP rs17346536 chr1 173300840 Intron 5b 676 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.557 LEAD_SNP rs10798269 chr1 173309713 Intron 6 ASSOCIATION 18204446 Systemic lupus erythematosus 7.0 TNFSF4 - RPL26P11 FUNCTIONAL_SNP rs10429844 chr1 173330377 Intron 4 20664 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.86 FUNCTIONAL_SNP rs1539255 chr1 173322660 Intron 4 12947 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2039982 chr1 173359187 Intron 5a 49474 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;0.939, YRI:0.963;0.893 FUNCTIONAL_SNP rs4916333 chr1 173331848 Intron 5b 22135 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.86 FUNCTIONAL_SNP rs2901719 chr1 173328189 Intron 6 18476 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.928 FUNCTIONAL_SNP rs4258254 chr1 173333449 Intron 7 23736 CEU:1.0;1.0, CHB:1.0;0.93, JPT:1.0;1.0, YRI:0.96;0.887 FUNCTIONAL_SNP rs1935325 chr1 173336003 Intron 7 26290 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.893 FUNCTIONAL_SNP rs10912609 chr1 173359426 Intron 7 49713 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.893 FUNCTIONAL_SNP rs4916216 chr1 173343620 Intron 7 33907 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.86 LEAD_SNP rs6701037 chr1 175120079 Intergenic 5b ASSOCIATION 21703634 Alcohol dependence 6.69897000434 TNN - KIAA0040 FUNCTIONAL_SNP rs6929 chr1 175126721 Exon,non-coding 5b 6642 CEU:1.0;0.924, CHB:0.814;0.56, JPT:1.0;0.758 FUNCTIONAL_SNP rs1057302 chr1 175126423 Exon,non-coding 5b 6344 CEU:1.0;0.961, CHB:1.0;0.846, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs1057305 chr1 175126223 Exon,non-coding 7 6144 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;1.0, YRI:1.0;0.884 FUNCTIONAL_SNP rs1057239 chr1 175130204 Exon,non-coding 6 10125 CEU:0.92;0.846, CHB:1.0;0.846 FUNCTIONAL_SNP rs1057246 chr1 175127534 Exon,non-coding 2b 7455 CEU:0.92;0.846, CHB:0.838;0.607 FUNCTIONAL_SNP rs2685 chr1 175127771 Exon,non-coding 5b 7692 CEU:0.92;0.846, CHB:0.842;0.71 FUNCTIONAL_SNP rs10912901 chr1 175138602 Intron 4 18523 CEU:0.9;0.809, CHB:0.81;0.553 FUNCTIONAL_SNP rs34370567 chr1 175131340 Intron 4 11261 CEU:0.92;0.846, CHB:0.842;0.71 FUNCTIONAL_SNP rs1894709 chr1 175132371 Intron 5b 12292 CEU:0.92;0.846, CHB:0.842;0.71 FUNCTIONAL_SNP rs6677097 chr1 175123897 Intergenic 5b 3818 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13374887 chr1 175131962 Intron 6 11883 CEU:0.92;0.846, CHB:0.842;0.71 FUNCTIONAL_SNP rs11583687 chr1 175132049 Intron 6 11970 CEU:0.918;0.81, CHB:0.842;0.71 FUNCTIONAL_SNP rs2285219 chr1 175130983 Intron 7 10904 CEU:0.92;0.846, CHB:0.842;0.71 FUNCTIONAL_SNP rs11580331 chr1 175123288 Intergenic 7 3209 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6702010 chr1 175123858 Intergenic 7 3779 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6425323 chr1 175125036 Intergenic 7 4957 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 LEAD_SNP rs3766680 chr1 175296448 Intron 6 ASSOCIATION 17903302 Tonometry 5.39794000867 TNR FUNCTIONAL_SNP rs12125589 chr1 175298689 Intron 5b 2241 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10912957 chr1 175295381 Intron 6 1067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10489321 chr1 175298757 Intron 6 2309 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10912963 chr1 175317421 Intron 7 20973 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;1.0 FUNCTIONAL_SNP rs10798388 chr1 175313314 Intron 7 16866 CEU:1.0;0.927, CHB:1.0;1.0, JPT:1.0;0.93, YRI:0.941;0.837 FUNCTIONAL_SNP rs7516478 chr1 175305252 Intron 7 8804 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs10912965 chr1 175317766 Intron 7 21318 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;0.853, YRI:1.0;0.933 FUNCTIONAL_SNP rs2040426 chr1 175320975 Intron 7 24527 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;0.934, YRI:0.941;0.837 FUNCTIONAL_SNP rs10489322 chr1 175298593 Intron 7 2145 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs633715 chr1 177852580 Intergenic 5a ASSOCIATION 21102462 Menarche (age at onset) 7.69897000434 FAM5B - SEC16B FUNCTIONAL_SNP rs6670873 chr1 177841685 Intergenic 4 10895 CEU:1.0;0.864 FUNCTIONAL_SNP rs516636 chr1 177855517 Intergenic 5b 2937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs506589 chr1 177894287 Intron 5b 41707 CEU:1.0;0.951, CHB:1.0;0.936, JPT:0.861;0.741 FUNCTIONAL_SNP rs574367 chr1 177873210 Intergenic 6 20630 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs589500 chr1 177876946 Intergenic 6 24366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs509325 chr1 177894591 Intron 6 42011 CEU:1.0;0.951, CHB:1.0;0.936, JPT:0.861;0.741 FUNCTIONAL_SNP rs693232 chr1 177881651 Intergenic 6 29071 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs543874 chr1 177889480 Intergenic 7 36900 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10913469 chr1 177913519 Intron 7 60939 CEU:1.0;0.906, CHB:0.782;0.571, JPT:0.789;0.622 FUNCTIONAL_SNP rs545608 chr1 177899121 Intron 7 46541 CEU:1.0;0.948, CHB:1.0;0.936, JPT:0.861;0.741 FUNCTIONAL_SNP rs527248 chr1 177875514 Intergenic 7 22934 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 LEAD_SNP rs543874 chr1 177889480 Intergenic 7 ASSOCIATION 20935630 Body mass index 22.3979400087 FAM5B - SEC16B FUNCTIONAL_SNP rs6670873 chr1 177841685 Intergenic 4 47795 CEU:0.949;0.818 FUNCTIONAL_SNP rs633715 chr1 177852580 Intergenic 5a 36900 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs516636 chr1 177855517 Intergenic 5b 33963 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs506589 chr1 177894287 Intron 5b 4807 CEU:1.0;1.0, CHB:1.0;0.936, JPT:0.861;0.741, YRI:1.0;1.0 FUNCTIONAL_SNP rs509325 chr1 177894591 Intron 6 5111 CEU:1.0;1.0, CHB:1.0;0.936, JPT:0.861;0.741, YRI:1.0;0.949 FUNCTIONAL_SNP rs574367 chr1 177873210 Intergenic 6 16270 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs589500 chr1 177876946 Intergenic 6 12534 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs693232 chr1 177881651 Intergenic 6 7829 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10913469 chr1 177913519 Intron 7 24039 CEU:1.0;0.952, CHB:0.782;0.571, JPT:0.789;0.622 FUNCTIONAL_SNP rs545608 chr1 177899121 Intron 7 9641 CEU:1.0;1.0, CHB:1.0;0.936, JPT:0.861;0.741, YRI:1.0;0.898 FUNCTIONAL_SNP rs630372 chr1 177885762 Intergenic 7 3718 CEU:1.0;0.828, CHB:1.0;0.699, JPT:1.0;0.731, YRI:1.0;0.535 FUNCTIONAL_SNP rs527248 chr1 177875514 Intergenic 7 13966 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10913469 chr1 177913519 Intron 7 ASSOCIATION 19079260 Body mass index 7.22184874962 SEC16B ASSOCIATION 19079260 Weight 8.0 SEC16B LEAD_SNP rs12047808 chr1 179469314 Intron 7 ASSOCIATION 19010793 Multiple sclerosis (age of onset) 5.22184874962 C1orf125 FUNCTIONAL_SNP rs10798686 chr1 179470357 Intron 7 1043 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1411478 chr1 180962282 Intron 7 ASSOCIATION 21685912 Progressive supranuclear palsy 10.3979400087 STX6 FUNCTIONAL_SNP rs3747957 chr1 180953853 Coding 5b 8429 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12754041 chr1 180957962 Exon,non-coding 5b 4320 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6665134 chr1 180949628 Intron 4 12654 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3789364 chr1 180951043 Intron 4 11239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2331903 chr1 180950869 Intron 4 11413 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7528526 chr1 180948574 Intron 5a 13708 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10753232 chr1 180950126 Intron 5b 12156 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;0.581 FUNCTIONAL_SNP rs3789362 chr1 180951692 Intron 5b 10590 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4652547 chr1 180954089 Intron 6 8193 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4652548 chr1 180954130 Intron 7 8152 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12744212 chr1 180952516 Intron 7 9766 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4111520 chr1 180958946 Intron 7 3336 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7553330 chr1 180956015 Intron 7 6267 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6425658 chr1 180956985 Intron 7 5297 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1028771 chr1 183170948 Intron 6 ASSOCIATION 21347282 Coronary heart disease 5.39794000867 LAMC2 LEAD_SNP rs525410 chr1 183176430 Intron 5b ASSOCIATION 21408207 Systemic lupus erythematosus 6.22184874962 LAMC2 FUNCTIONAL_SNP rs601508 chr1 183174002 Intron 7 2428 CEU:1.0;0.922, CHB:0.951;0.863, JPT:0.947;0.812 LEAD_SNP rs4651156 chr1 183837032 Intron 6 ASSOCIATION 20360315 Response to antidepressants 5.52287874528 RGL1 FUNCTIONAL_SNP rs9425326 chr1 183839005 Intron 5b 1973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10752922 chr1 183841927 Intron 5b 4895 CEU:0.952;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.78 FUNCTIONAL_SNP rs10797917 chr1 183841796 Intron 5b 4764 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.884;0.739 LEAD_SNP rs10797919 chr1 183852914 Intron 3a ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.04575749056 RGL1 FUNCTIONAL_SNP rs11585126 chr1 183850901 Intron 2b 2013 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;0.928 LEAD_SNP rs756199 chr1 184002874 Intron 5b ASSOCIATION 20189936 Height 5.15490195999 GLT25D2 FUNCTIONAL_SNP rs12133608 chr1 184001738 Intron 6 1136 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9332418 chr1 184001892 Intron 7 982 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2274432 chr1 184020945 Coding 4 ASSOCIATION 18391951 Height 8.09691001301 TSEN15 FUNCTIONAL_SNP rs1046934 chr1 184023529 Coding 6 2584 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs10797938 chr1 184019954 Intergenic 4 991 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs1926872 chr1 184018475 Intergenic 6 2470 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs10911902 chr1 186632317 Intergenic 7 ASSOCIATION 18347602 Schizophrenia 5.69897000434 PDC - PTGS2 LEAD_SNP rs4140564 chr1 186725003 Intergenic 7 ASSOCIATION 18471798 Knee osteoarthritis 5.52287874528 PTGS2 - PLA2G4A LEAD_SNP rs10737562 chr1 189723623 Intergenic 5b ASSOCIATION 21408207 Systemic lupus erythematosus 5.15490195999 RPS3AP9 - FAM5C FUNCTIONAL_SNP rs514714 chr1 189648157 Intergenic 2b 75466 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs579732 chr1 189670204 Intergenic 3a 53419 CEU:1.0;1.0, CHB:0.948;0.817, JPT:1.0;0.754 FUNCTIONAL_SNP rs516851 chr1 189626453 Intergenic 3a 97170 CEU:1.0;0.951, CHB:0.941;0.838, JPT:1.0;0.739 FUNCTIONAL_SNP rs693683 chr1 189631634 Intergenic 4 91989 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.754 FUNCTIONAL_SNP rs491106 chr1 189684113 Intergenic 4 39510 CEU:1.0;0.959, CHB:0.948;0.817, JPT:1.0;0.799 FUNCTIONAL_SNP rs473773 chr1 189627183 Intergenic 4 96440 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs2027325 chr1 189626291 Intergenic 4 97332 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs477023 chr1 189627664 Intergenic 4 95959 CEU:1.0;0.955, CHB:0.936;0.827, JPT:1.0;0.789 FUNCTIONAL_SNP rs1033841 chr1 189588898 Intergenic 4 134725 CEU:0.959;0.92, CHB:0.895;0.728, JPT:1.0;0.76 FUNCTIONAL_SNP rs10800627 chr1 189721806 Intergenic 4 1817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs539147 chr1 189629195 Intergenic 5a 94428 CEU:1.0;0.96, CHB:0.946;0.812, JPT:1.0;0.76 FUNCTIONAL_SNP rs551577 chr1 189625985 Intergenic 5a 97638 CEU:1.0;0.956, CHB:0.944;0.844, JPT:1.0;0.747 FUNCTIONAL_SNP rs155916 chr1 189566655 Intergenic 5a 156968 CEU:0.959;0.92, CHB:0.89;0.687, JPT:1.0;0.76 FUNCTIONAL_SNP rs1393499 chr1 189581462 Intergenic 5a 142161 CEU:0.959;0.92, CHB:0.89;0.687, JPT:1.0;0.76 FUNCTIONAL_SNP rs2038651 chr1 189589427 Intergenic 5a 134196 CEU:0.958;0.881, CHB:0.89;0.687, JPT:1.0;0.76 FUNCTIONAL_SNP rs554431 chr1 189626319 Intergenic 5a 97304 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs10733060 chr1 189723490 Intergenic 5b 133 CEU:1.0;0.96, CHB:0.932;0.614, JPT:1.0;0.885 FUNCTIONAL_SNP rs10733059 chr1 189688228 Intergenic 5b 35395 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs482865 chr1 189627860 Intergenic 5b 95763 CEU:1.0;0.959, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs2902583 chr1 189678231 Intergenic 5b 45392 CEU:1.0;0.919, CHB:0.946;0.812, JPT:1.0;0.799 FUNCTIONAL_SNP rs504384 chr1 189688204 Intergenic 5b 35419 CEU:1.0;1.0, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs541251 chr1 189644699 Intergenic 5b 78924 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs521299 chr1 189632564 Intergenic 5b 91059 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.754 FUNCTIONAL_SNP rs1976437 chr1 189639180 Intergenic 5b 84443 CEU:0.959;0.92, CHB:0.942;0.764, JPT:1.0;0.76 FUNCTIONAL_SNP rs538273 chr1 189614269 Intergenic 5b 109354 CEU:1.0;0.96, CHB:0.898;0.77, JPT:1.0;0.76 FUNCTIONAL_SNP rs487616 chr1 189614321 Intergenic 5b 109302 CEU:1.0;0.96, CHB:0.898;0.77, JPT:1.0;0.76 FUNCTIONAL_SNP rs10919620 chr1 189685497 Intergenic 5b 38126 CEU:1.0;0.96, CHB:0.932;0.616, JPT:1.0;0.758 FUNCTIONAL_SNP rs507655 chr1 189647416 Intergenic 5b 76207 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs155919 chr1 189563472 Intergenic 5b 160151 CEU:0.957;0.916, CHB:0.887;0.68, JPT:1.0;0.754 FUNCTIONAL_SNP rs10753842 chr1 189688667 Intergenic 5b 34956 CEU:1.0;0.959, CHB:0.949;0.901, JPT:1.0;0.846 FUNCTIONAL_SNP rs1393500 chr1 189588831 Intergenic 5b 134792 CEU:0.959;0.92, CHB:0.895;0.728, JPT:1.0;0.76 FUNCTIONAL_SNP rs2789891 chr1 189679539 Intergenic 6 44084 CEU:1.0;1.0, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs487498 chr1 189627367 Intergenic 6 96256 CEU:1.0;1.0, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs1339446 chr1 189733979 Intergenic 6 10356 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.856 FUNCTIONAL_SNP rs481864 chr1 189673058 Intergenic 6 50565 CEU:1.0;1.0, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs540093 chr1 189608672 Intergenic 6 114951 CEU:1.0;1.0, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs571518 chr1 189625415 Intergenic 6 98208 CEU:1.0;0.957, CHB:0.938;0.787, JPT:1.0;0.755 FUNCTIONAL_SNP rs494220 chr1 189633655 Intergenic 6 89968 CEU:0.959;0.92, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs534695 chr1 189612335 Intergenic 6 111288 CEU:1.0;1.0, CHB:0.898;0.77, JPT:1.0;0.76 FUNCTIONAL_SNP rs7543449 chr1 189717659 Intergenic 6 5964 CEU:1.0;0.956, CHB:1.0;0.951, JPT:1.0;0.758 FUNCTIONAL_SNP rs2863819 chr1 189595647 Intergenic 6 127976 CEU:0.959;0.92, CHB:0.882;0.64, JPT:1.0;0.76 FUNCTIONAL_SNP rs12131051 chr1 189664857 Intergenic 6 58766 CEU:1.0;0.915, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs10919670 chr1 189718875 Intergenic 6 4748 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs155904 chr1 189575823 Intergenic 6 147800 CEU:0.956;0.914, CHB:0.868;0.669, JPT:1.0;0.747 FUNCTIONAL_SNP rs502019 chr1 189628045 Intergenic 6 95578 CEU:1.0;0.958, CHB:0.946;0.85, JPT:1.0;0.76 FUNCTIONAL_SNP rs581398 chr1 189626878 Intergenic 6 96745 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs480025 chr1 189630723 Intergenic 6 92900 CEU:1.0;0.845, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs513328 chr1 189626819 Intergenic 6 96804 CEU:1.0;1.0 FUNCTIONAL_SNP rs10919738 chr1 189754023 Intron 6 30400 CEU:1.0;0.814, CHB:0.952;0.906, JPT:0.861;0.619 FUNCTIONAL_SNP rs573805 chr1 189618308 Intergenic 6 105315 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs577515 chr1 189624407 Intergenic 6 99216 CEU:1.0;0.955 FUNCTIONAL_SNP rs564100 chr1 189628706 Intergenic 6 94917 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;0.794 FUNCTIONAL_SNP rs10737558 chr1 189690018 Intergenic 6 33605 CEU:1.0;0.958, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs480148 chr1 189646815 Intergenic 6 76808 CEU:1.0;1.0, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs479137 chr1 189653244 Intergenic 6 70379 CEU:1.0;0.884, CHB:0.898;0.769, JPT:1.0;0.76 FUNCTIONAL_SNP rs7521955 chr1 189742133 Intergenic 6 18510 CEU:0.958;0.881, CHB:0.898;0.77, JPT:1.0;0.836 FUNCTIONAL_SNP rs493012 chr1 189616777 Intergenic 6 106846 CEU:0.957;0.844, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs510935 chr1 189707967 Intergenic 6 15656 CEU:1.0;1.0 FUNCTIONAL_SNP rs485028 chr1 189667459 Intergenic 6 56164 CEU:1.0;1.0, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs508382 chr1 189622286 Intergenic 6 101337 CEU:1.0;0.958, CHB:0.946;0.85, JPT:1.0;0.76 FUNCTIONAL_SNP rs513551 chr1 189632160 Intergenic 7 91463 CEU:1.0;0.959, CHB:0.948;0.817, JPT:1.0;0.754 FUNCTIONAL_SNP rs478740 chr1 189646898 Intergenic 7 76725 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs10922329 chr1 189568547 Intergenic 7 155076 CEU:0.958;0.881, CHB:0.89;0.687, JPT:1.0;0.758 FUNCTIONAL_SNP rs2789894 chr1 189621439 Intergenic 7 102184 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.754 FUNCTIONAL_SNP rs475174 chr1 189622419 Intergenic 7 101204 CEU:1.0;0.956, CHB:0.944;0.846, JPT:1.0;0.755 FUNCTIONAL_SNP rs533045 chr1 189662841 Intergenic 7 60782 CEU:1.0;0.919, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs692795 chr1 189669366 Intergenic 7 54257 CEU:1.0;1.0, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs1028674 chr1 189668992 Intergenic 7 54631 CEU:1.0;0.959, CHB:0.938;0.684, JPT:1.0;0.596 FUNCTIONAL_SNP rs12137550 chr1 189559581 Intergenic 7 164042 CEU:0.959;0.92, CHB:0.89;0.687, JPT:1.0;0.76 FUNCTIONAL_SNP rs478799 chr1 189646562 Intergenic 7 77061 CEU:1.0;0.951, CHB:0.851;0.678, JPT:1.0;0.745 FUNCTIONAL_SNP rs560227 chr1 189636292 Intergenic 7 87331 CEU:1.0;0.958, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs537703 chr1 189629642 Intergenic 7 93981 CEU:1.0;0.96, CHB:0.851;0.725, JPT:1.0;0.76 FUNCTIONAL_SNP rs1033838 chr1 189588098 Intergenic 7 135525 CEU:0.959;0.92, CHB:0.89;0.687, JPT:1.0;0.754 FUNCTIONAL_SNP rs577137 chr1 189633001 Intergenic 7 90622 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs580723 chr1 189642890 Intergenic 7 80733 CEU:1.0;0.957, CHB:0.936;0.876, JPT:1.0;0.744 FUNCTIONAL_SNP rs1976438 chr1 189588249 Intergenic 7 135374 CEU:0.959;0.92, CHB:0.89;0.687, JPT:1.0;0.76 FUNCTIONAL_SNP rs563323 chr1 189630140 Intergenic 7 93483 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs528001 chr1 189695297 Intergenic 7 28326 CEU:1.0;0.96, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs7532675 chr1 189587034 Intergenic 7 136589 CEU:0.955;0.912, CHB:0.874;0.621, JPT:1.0;0.587 FUNCTIONAL_SNP rs495240 chr1 189623964 Intergenic 7 99659 CEU:1.0;0.921, CHB:0.947;0.853, JPT:1.0;0.758 FUNCTIONAL_SNP rs2760045 chr1 189621500 Intergenic 7 102123 CEU:1.0;0.954, CHB:0.938;0.88, JPT:1.0;0.778 FUNCTIONAL_SNP rs546965 chr1 189618057 Intergenic 7 105566 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs12132519 chr1 189731048 Intergenic 7 7425 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10494624 chr1 189737389 Intergenic 7 13766 CEU:1.0;0.959, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs527011 chr1 189644370 Intergenic 7 79253 CEU:0.952;0.865, CHB:1.0;0.889, JPT:0.933;0.731 FUNCTIONAL_SNP rs477876 chr1 189646453 Intergenic 7 77170 CEU:1.0;0.956, CHB:0.932;0.816, JPT:1.0;0.696 FUNCTIONAL_SNP rs6672054 chr1 189602917 Intergenic 7 120706 CEU:0.959;0.92, CHB:0.898;0.77, JPT:1.0;0.76 FUNCTIONAL_SNP rs10919607 chr1 189675416 Intergenic 7 48207 CEU:0.958;0.918, CHB:0.944;0.77, JPT:1.0;0.754 FUNCTIONAL_SNP rs569018 chr1 189622662 Intergenic 7 100961 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs10754243 chr1 189577726 Intergenic 7 145897 CEU:1.0;0.957, CHB:0.875;0.653, JPT:1.0;0.788 FUNCTIONAL_SNP rs518342 chr1 189658034 Intergenic 7 65589 CEU:1.0;0.96, CHB:0.947;0.813, JPT:1.0;0.76 FUNCTIONAL_SNP rs538831 chr1 189648544 Intergenic 7 75079 CEU:1.0;0.96, CHB:0.946;0.812, JPT:1.0;0.754 FUNCTIONAL_SNP rs488657 chr1 189639744 Intergenic 7 83879 CEU:1.0;1.0, CHB:0.946;0.812, JPT:1.0;0.76 FUNCTIONAL_SNP rs478424 chr1 189637659 Intergenic 7 85964 CEU:1.0;0.959, CHB:0.946;0.85, JPT:1.0;0.76 FUNCTIONAL_SNP rs537821 chr1 189648402 Intergenic 7 75221 CEU:1.0;0.953 FUNCTIONAL_SNP rs10919649 chr1 189703188 Intergenic 7 20435 CEU:1.0;0.96, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs2149824 chr1 189641573 Intergenic 7 82050 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs366839 chr1 189558666 Intergenic 7 164957 CEU:0.959;0.92, CHB:0.89;0.687, JPT:1.0;0.76 FUNCTIONAL_SNP rs472318 chr1 189670575 Intergenic 7 53048 CEU:1.0;1.0, CHB:0.945;0.808, JPT:1.0;0.754 FUNCTIONAL_SNP rs1928492 chr1 189583522 Intergenic 7 140101 CEU:0.959;0.92, CHB:0.89;0.687, JPT:1.0;0.76 FUNCTIONAL_SNP rs534795 chr1 189645319 Intergenic 7 78304 CEU:1.0;0.917, CHB:0.942;0.764, JPT:1.0;0.758 FUNCTIONAL_SNP rs12127003 chr1 189593725 Intergenic 7 129898 CEU:0.954;0.911, CHB:0.887;0.746, JPT:1.0;0.754 FUNCTIONAL_SNP rs568100 chr1 189649433 Intergenic 7 74190 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs476454 chr1 189636930 Intergenic 7 86693 CEU:1.0;1.0, CHB:0.947;0.854, JPT:1.0;0.754 FUNCTIONAL_SNP rs980798 chr1 189672228 Intergenic 7 51395 CEU:1.0;0.921, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs1339445 chr1 189741633 Intergenic 7 18010 CEU:1.0;0.959, CHB:0.948;0.817, JPT:1.0;0.889, YRI:1.0;0.72 FUNCTIONAL_SNP rs11802944 chr1 189713580 Intergenic 7 10043 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12402136 chr1 189699413 Intergenic 7 24210 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0 FUNCTIONAL_SNP rs578379 chr1 189617340 Intergenic 7 106283 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs477525 chr1 189620479 Intergenic 7 103144 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.758 FUNCTIONAL_SNP rs478041 chr1 189622074 Intergenic 7 101549 CEU:1.0;0.96, CHB:0.946;0.812, JPT:1.0;0.76 FUNCTIONAL_SNP rs2772318 chr1 189646197 Intergenic 7 77426 CEU:1.0;0.96, CHB:0.946;0.85, JPT:1.0;0.785 FUNCTIONAL_SNP rs499557 chr1 189618512 Intergenic 7 105111 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs2760046 chr1 189621460 Intergenic 7 102163 CEU:1.0;0.959, CHB:0.945;0.892, JPT:1.0;0.79 FUNCTIONAL_SNP rs507258 chr1 189622099 Intergenic 7 101524 CEU:1.0;0.959, CHB:0.945;0.808, JPT:1.0;0.758 FUNCTIONAL_SNP rs463228 chr1 189562375 Intergenic 7 161248 CEU:0.959;0.92, CHB:0.89;0.687, JPT:1.0;0.76 FUNCTIONAL_SNP rs494978 chr1 189660572 Intergenic 7 63051 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs7538568 chr1 189582013 Intergenic 7 141610 CEU:0.959;0.92, CHB:0.89;0.687, JPT:1.0;0.76 FUNCTIONAL_SNP rs486286 chr1 189640812 Intergenic 7 82811 CEU:1.0;0.959, CHB:0.948;0.817, JPT:1.0;0.799 FUNCTIONAL_SNP rs7538064 chr1 189680603 Intergenic 7 43020 CEU:1.0;1.0, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs2208921 chr1 189680377 Intergenic 7 43246 CEU:1.0;1.0, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs4144538 chr1 189712171 Intergenic 7 11452 CEU:0.958;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10489760 chr1 189580639 Intergenic 7 142984 CEU:0.959;0.92, CHB:0.89;0.687, JPT:1.0;0.76 FUNCTIONAL_SNP rs532905 chr1 189620278 Intergenic 7 103345 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs1556909 chr1 189709420 Intergenic 7 14203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs554415 chr1 189659987 Intergenic 7 63636 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs524723 chr1 189618733 Intergenic 7 104890 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs572852 chr1 189618415 Intergenic 7 105208 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs572342 chr1 189640537 Intergenic 7 83086 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs10922362 chr1 189585380 Intergenic 7 138243 CEU:0.958;0.918, CHB:0.89;0.687, JPT:1.0;0.755 FUNCTIONAL_SNP rs1361344 chr1 189660293 Intergenic 7 63330 CEU:1.0;0.956, CHB:0.947;0.813, JPT:1.0;0.755 FUNCTIONAL_SNP rs481737 chr1 189646913 Intergenic 7 76710 CEU:1.0;0.96, CHB:0.948;0.817, JPT:1.0;0.76 FUNCTIONAL_SNP rs10800600 chr1 189667952 Intergenic 7 55671 CEU:1.0;1.0, CHB:0.942;0.841, JPT:1.0;0.76 FUNCTIONAL_SNP rs7530989 chr1 189711663 Intergenic 7 11960 CEU:1.0;0.958, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs155902 chr1 189577261 Intergenic 7 146362 CEU:1.0;0.957, CHB:0.886;0.648, JPT:1.0;0.744 FUNCTIONAL_SNP rs10801655 chr1 189600151 Intergenic 7 123472 CEU:0.959;0.92, CHB:0.895;0.728 FUNCTIONAL_SNP rs10801657 chr1 189604612 Intergenic 7 119011 CEU:1.0;0.959, CHB:0.896;0.764, JPT:1.0;0.751 LEAD_SNP rs1400544 chr1 189861404 Intergenic 7 ASSOCIATION 17903303 Subclinical atherosclerosis traits (other) 5.22184874962 RPS3AP9 - FAM5C FUNCTIONAL_SNP rs7532113 chr1 189852453 Intergenic 5a 8951 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.846 FUNCTIONAL_SNP rs7539739 chr1 189865412 Intergenic 6 4008 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs10920037 chr1 189859513 Intergenic 6 1891 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7539966 chr1 189865628 Intergenic 6 4224 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10920039 chr1 189859719 Intergenic 7 1685 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7522802 chr1 189858473 Intergenic 7 2931 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1935881 chr1 190066386 Intergenic 7 ASSOCIATION 17903301 Echocardiographic traits 5.22184874962 FAM5C FUNCTIONAL_SNP rs6427980 chr1 190069943 Intron 7 3557 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 LEAD_SNP rs2053302 chr1 190841673 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 5.39794000867 FAM5C - RGS18 FUNCTIONAL_SNP rs2105423 chr1 190832971 Intergenic 2b 8702 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs7521393 chr1 190833868 Intergenic 5a 7805 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs12039354 chr1 190862268 Intergenic 5b 20595 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs2419925 chr1 190819195 Intergenic 5b 22478 CEU:0.947;0.852, CHB:1.0;0.675, JPT:1.0;0.697, YRI:0.962;0.756 FUNCTIONAL_SNP rs1370882 chr1 190833695 Intergenic 5b 7978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs1438533 chr1 190833559 Intergenic 5b 8114 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs1156625 chr1 190835394 Intergenic 6 6279 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs1156626 chr1 190835135 Intergenic 6 6538 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs1156627 chr1 190835000 Intergenic 6 6673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823, YRI:0.962;0.891 FUNCTIONAL_SNP rs1431137 chr1 190923645 Intergenic 6 81972 CEU:0.898;0.806, CHB:1.0;0.697 FUNCTIONAL_SNP rs1936993 chr1 190860403 Intergenic 6 18730 CEU:1.0;0.893, CHB:1.0;0.846 FUNCTIONAL_SNP rs4845175 chr1 190879904 Intergenic 6 38231 CEU:1.0;0.901, CHB:1.0;0.847 FUNCTIONAL_SNP rs1025717 chr1 190851794 Intergenic 6 10121 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs4845257 chr1 190893913 Intergenic 6 52240 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.712 FUNCTIONAL_SNP rs1370880 chr1 190836891 Intergenic 6 4782 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.935 FUNCTIONAL_SNP rs1030922 chr1 190854351 Intergenic 6 12678 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs1170712 chr1 190855787 Intergenic 6 14114 CEU:1.0;0.894, CHB:1.0;0.846 FUNCTIONAL_SNP rs10800974 chr1 190820505 Intergenic 6 21168 CEU:0.943;0.841, CHB:1.0;0.673, JPT:1.0;0.65, YRI:0.957;0.735 FUNCTIONAL_SNP rs10800986 chr1 190848743 Intergenic 6 7070 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs10920810 chr1 190818216 Intergenic 6 23457 CEU:0.943;0.841, CHB:1.0;0.673, JPT:1.0;0.65, YRI:0.954;0.721 FUNCTIONAL_SNP rs10920829 chr1 190857871 Intergenic 6 16198 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs10920837 chr1 190893221 Intergenic 6 51548 CEU:1.0;0.894, CHB:1.0;0.846 FUNCTIONAL_SNP rs1438532 chr1 190834267 Intergenic 6 7406 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs12146125 chr1 190818105 Intergenic 6 23568 CEU:0.943;0.841, CHB:1.0;0.673, JPT:1.0;0.65, YRI:0.956;0.73 FUNCTIONAL_SNP rs7535458 chr1 190853596 Intergenic 7 11923 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.935 FUNCTIONAL_SNP rs1936980 chr1 190876141 Intergenic 7 34468 CEU:1.0;0.894, CHB:1.0;0.846 FUNCTIONAL_SNP rs6684247 chr1 190847263 Intergenic 7 5590 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs1936992 chr1 190825536 Intergenic 7 16137 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.914;0.69 FUNCTIONAL_SNP rs2033797 chr1 190852215 Intergenic 7 10542 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs6686343 chr1 190856627 Intergenic 7 14954 CEU:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs4845251 chr1 190815260 Intergenic 7 26413 CEU:0.946;0.85, CHB:1.0;0.674, JPT:1.0;0.823, YRI:0.962;0.756 FUNCTIONAL_SNP rs12145615 chr1 190891132 Intergenic 7 49459 CEU:1.0;0.901, CHB:1.0;0.847 FUNCTIONAL_SNP rs1370879 chr1 190837105 Intergenic 7 4568 CEU:1.0;1.0, YRI:1.0;0.921 FUNCTIONAL_SNP rs1030921 chr1 190854143 Intergenic 7 12470 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.891 FUNCTIONAL_SNP rs1170703 chr1 190837514 Intergenic 7 4159 CEU:1.0;0.898, CHB:1.0;0.847 FUNCTIONAL_SNP rs12025636 chr1 190901190 Intergenic 7 59517 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.731 FUNCTIONAL_SNP rs7549733 chr1 190916669 Intergenic 7 74996 CEU:0.897;0.805, CHB:1.0;0.847 FUNCTIONAL_SNP rs1438530 chr1 190834375 Intergenic 7 7298 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.838 FUNCTIONAL_SNP rs1438531 chr1 190834358 Intergenic 7 7315 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.965 FUNCTIONAL_SNP rs10800972 chr1 190818256 Intergenic 7 23417 CEU:0.947;0.852, CHB:1.0;0.675, JPT:1.0;0.697, YRI:0.96;0.749 FUNCTIONAL_SNP rs10800989 chr1 190855881 Intergenic 7 14208 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs10920831 chr1 190862150 Intergenic 7 20477 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs10920836 chr1 190891339 Intergenic 7 49666 CEU:1.0;0.894, CHB:1.0;0.846 FUNCTIONAL_SNP rs6699971 chr1 190860691 Intergenic 7 19018 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.922;0.713 FUNCTIONAL_SNP rs12567544 chr1 190913478 Intergenic 7 71805 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2118650 chr1 190823688 Intergenic 7 17985 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.965;0.901 FUNCTIONAL_SNP rs2118652 chr1 190841987 Intergenic 7 314 CEU:1.0;0.901, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.935 LEAD_SNP rs10801047 chr1 191559356 Intergenic 6 ASSOCIATION 17554261 Crohn's disease 7.52287874528 FAM5C - RGS18 FUNCTIONAL_SNP rs6665749 chr1 191577594 Intergenic 2b 18238 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.952;0.829 FUNCTIONAL_SNP rs10920972 chr1 191570865 Intergenic 6 11509 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.855 FUNCTIONAL_SNP rs16833617 chr1 191575904 Intergenic 6 16548 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.916;0.805 FUNCTIONAL_SNP rs1954603 chr1 191558101 Intergenic 7 1255 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.891 FUNCTIONAL_SNP rs6694676 chr1 191575347 Intergenic 7 15991 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.923;0.82 FUNCTIONAL_SNP rs7520824 chr1 191571557 Intergenic 7 12201 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.855 FUNCTIONAL_SNP rs4845287 chr1 191568030 Intergenic 7 8674 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.855 FUNCTIONAL_SNP rs10801045 chr1 191553782 Intergenic 7 5574 CEU:1.0;0.824, CHB:1.0;0.822, JPT:1.0;1.0, YRI:0.954;0.87 LEAD_SNP rs2816316 chr1 192536813 Intergenic 7 ASSOCIATION 20190752 Celiac disease 16.6989700043 RGS21 - RGS1 ASSOCIATION 18311140 Celiac disease 10.5228787453 RGS21 - RGS1 FUNCTIONAL_SNP rs2984920 chr1 192544795 Intergenic 2a 7982 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2816305 chr1 192524269 Intron 3a 12544 CEU:1.0;0.89, CHB:1.0;0.924, JPT:1.0;0.945 FUNCTIONAL_SNP rs7535818 chr1 192545099 Intron 3a 8286 CEU:1.0;1.0 FUNCTIONAL_SNP rs1323292 chr1 192541021 Intergenic 4 4208 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2984919 chr1 192541172 Intergenic 5b 4359 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.522 FUNCTIONAL_SNP rs1547624 chr1 192543837 Intergenic 5b 7024 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.683 FUNCTIONAL_SNP rs4636437 chr1 192536451 Intergenic 6 362 CEU:1.0;1.0, CHB:1.0;0.64, JPT:1.0;0.689 FUNCTIONAL_SNP rs1323296 chr1 192537508 Intergenic 6 695 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.522 FUNCTIONAL_SNP rs1323298 chr1 192519865 Intron 6 16948 CEU:1.0;0.89, CHB:1.0;0.924, JPT:1.0;0.945 FUNCTIONAL_SNP rs2760524 chr1 192530548 Intron 6 6265 CEU:1.0;0.838, CHB:0.918;0.843, JPT:0.942;0.888 FUNCTIONAL_SNP rs1359062 chr1 192541472 Intergenic 6 4659 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs9427573 chr1 192995213 Intron 6 ASSOCIATION 21668797 Cannabis dependence 5.30102999566 UCHL5 LEAD_SNP rs606149 chr1 193921548 Intergenic 4 ASSOCIATION 20516156 Major depressive disorder 5.52287874528 RPL23AP22 - EEF1A1P14 LEAD_SNP rs1890645 chr1 195531423 Intergenic 7 ASSOCIATION 20662065 Neonatal lupus 5.39794000867 EEF1A1P14 - KCNT2 FUNCTIONAL_SNP rs11802846 chr1 195557047 Intergenic 5a 25624 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1548286 chr1 195516792 Intergenic 5b 14631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs7552007 chr1 195483349 Intergenic 6 48074 CEU:1.0;1.0, CHB:1.0;0.835, JPT:1.0;1.0, YRI:0.916;0.774 FUNCTIONAL_SNP rs6669250 chr1 195529022 Intergenic 6 2401 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs12040380 chr1 195503606 Intergenic 6 27817 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;1.0 FUNCTIONAL_SNP rs10921865 chr1 195524821 Intergenic 7 6602 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.734 FUNCTIONAL_SNP rs1339555 chr1 195486814 Intergenic 7 44609 CEU:1.0;1.0, CHB:1.0;0.832, JPT:1.0;1.0, YRI:0.918;0.781 FUNCTIONAL_SNP rs10921869 chr1 195538943 Intergenic 7 7520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2400604 chr1 195531171 Intergenic 7 252 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7517337 chr1 195914273 Intergenic 6 ASSOCIATION 21116278 Total ventricular volume 5.69897000434 EEF1A1P14 - KCNT2 FUNCTIONAL_SNP rs7521473 chr1 195912396 Intergenic 6 1877 CEU:1.0;1.0, CHB:1.0;0.779, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs4657814 chr1 195914569 Intergenic 7 296 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.888, YRI:1.0;1.0 LEAD_SNP rs7512769 chr1 196042662 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.69897000434 EEF1A1P14 - KCNT2 FUNCTIONAL_SNP rs2094028 chr1 196150496 Intergenic 2b 107834 CEU:1.0;0.893 FUNCTIONAL_SNP rs10922044 chr1 196129391 Intergenic 5b 86729 CEU:1.0;0.888 FUNCTIONAL_SNP rs10801525 chr1 196162311 Intergenic 5b 119649 CEU:1.0;0.893 FUNCTIONAL_SNP rs12239650 chr1 196128767 Intergenic 6 86105 CEU:1.0;0.88 FUNCTIONAL_SNP rs12132584 chr1 196123070 Intergenic 6 80408 CEU:1.0;0.889 FUNCTIONAL_SNP rs6671997 chr1 196062126 Intergenic 6 19464 CEU:1.0;0.946 FUNCTIONAL_SNP rs10754180 chr1 196136924 Intergenic 7 94262 CEU:1.0;0.893 FUNCTIONAL_SNP rs12039965 chr1 196144245 Intergenic 7 101583 CEU:1.0;0.888 FUNCTIONAL_SNP rs10922022 chr1 196059994 Intergenic 7 17332 CEU:1.0;0.94 FUNCTIONAL_SNP rs10922013 chr1 196027872 Intron 7 14790 CEU:1.0;1.0, YRI:0.912;0.833 FUNCTIONAL_SNP rs12122832 chr1 196125008 Intergenic 7 82346 CEU:1.0;0.893 FUNCTIONAL_SNP rs12124759 chr1 196040041 Intergenic 7 2621 CEU:1.0;1.0 FUNCTIONAL_SNP rs12062715 chr1 196171426 Intergenic 7 128764 CEU:1.0;0.888 LEAD_SNP rs1329424 chr1 196646176 Intron 7 ASSOCIATION 20385819 Age-related macular degeneration 15.2218487496 CFH FUNCTIONAL_SNP rs1061147 chr1 196654324 Coding 7 8148 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0, YRI:0.939;0.52 FUNCTIONAL_SNP rs2860102 chr1 196668319 Intron 3a 22143 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:0.949;0.647 FUNCTIONAL_SNP rs10922102 chr1 196668287 Intron 4 22111 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:0.951;0.702 FUNCTIONAL_SNP rs1329422 chr1 196655280 Intron 5a 9104 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:0.951;0.73 FUNCTIONAL_SNP rs482934 chr1 196658497 Intron 5b 12321 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;0.745 FUNCTIONAL_SNP rs10801553 chr1 196655743 Intron 6 9567 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0, YRI:0.947;0.743 FUNCTIONAL_SNP rs10922094 chr1 196661505 Intron 6 15329 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:0.951;0.731 FUNCTIONAL_SNP rs12038333 chr1 196672454 Intron 6 26278 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0, YRI:0.947;0.743 FUNCTIONAL_SNP rs572515 chr1 196646261 Intron 6 85 CEU:1.0;1.0, CHB:1.0;0.789, JPT:1.0;1.0, YRI:1.0;0.723 FUNCTIONAL_SNP rs2300430 chr1 196655713 Intron 6 9537 CEU:1.0;0.961, CHB:1.0;0.741, JPT:1.0;1.0, YRI:0.946;0.706 FUNCTIONAL_SNP rs1329421 chr1 196656205 Intron 7 10029 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:0.946;0.633 FUNCTIONAL_SNP rs10801554 chr1 196657655 Intron 7 11479 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:0.946;0.848 FUNCTIONAL_SNP rs10801555 chr1 196660261 Intron 7 14085 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0, YRI:0.947;0.743 FUNCTIONAL_SNP rs10801556 chr1 196660464 Intron 7 14288 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0, YRI:0.83;0.619 FUNCTIONAL_SNP rs10754199 chr1 196670839 Intron 7 24663 CEU:1.0;1.0, CHB:1.0;0.74, JPT:1.0;1.0, YRI:0.947;0.743 FUNCTIONAL_SNP rs12045503 chr1 196672473 Intron 7 26297 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:0.952;0.732 FUNCTIONAL_SNP rs7529589 chr1 196658279 Intron 7 12103 CEU:1.0;1.0, CHB:0.785;0.616, JPT:1.0;1.0, YRI:0.939;0.52 FUNCTIONAL_SNP rs4658046 chr1 196670757 Intron 7 24581 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0, YRI:0.947;0.743 FUNCTIONAL_SNP rs514943 chr1 196663913 Intron 7 17737 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0, YRI:1.0;0.724 LEAD_SNP rs1061170 chr1 196659237 Coding 7 ASSOCIATION 21665990 Age-related macular degeneration 261.0 CFH ASSOCIATION 20385826 Age-related macular degeneration 116.397940009 CFH FUNCTIONAL_SNP rs10801554 chr1 196657655 Intron 7 1582 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.716 LEAD_SNP rs10737680 chr1 196679455 Intron 5b ASSOCIATION 20385819 Age-related macular degeneration 75.6989700043 CFH FUNCTIONAL_SNP rs1329428 chr1 196702810 Intron 5b 23355 CEU:1.0;1.0, CHB:1.0;0.909, JPT:0.946;0.811, YRI:1.0;1.0 FUNCTIONAL_SNP rs10922106 chr1 196691464 Intron 7 12009 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs7535263 chr1 196682346 Intron 7 2891 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.727 FUNCTIONAL_SNP rs7540032 chr1 196701284 Intron 7 21829 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;0.854, YRI:1.0;1.0 FUNCTIONAL_SNP rs3753395 chr1 196686652 Intron 7 7197 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.727 FUNCTIONAL_SNP rs1410996 chr1 196696933 Intron 7 17478 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.727 LEAD_SNP rs6677604 chr1 196686918 Intron 5b ASSOCIATION 21399633 Nephropathy 9.52287874528 CFH FUNCTIONAL_SNP rs7519758 chr1 196825287 Intron 5b 138369 CEU:1.0;1.0, CHB:1.0;0.779, JPT:1.0;1.0 FUNCTIONAL_SNP rs7542235 chr1 196823613 Intron 6 136695 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:0.921;0.816 FUNCTIONAL_SNP rs2019727 chr1 196674714 Intron 7 12204 CEU:1.0;1.0, CHB:1.0;0.779, JPT:1.0;0.569, YRI:1.0;1.0 FUNCTIONAL_SNP rs12144939 chr1 196698945 Intron 7 12027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;0.891 FUNCTIONAL_SNP rs16840522 chr1 196710916 Intron 7 23998 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16840639 chr1 196824773 Intron 7 137855 CEU:1.0;1.0, CHB:1.0;0.779, JPT:1.0;1.0, YRI:0.921;0.816 LEAD_SNP rs1410996 chr1 196696933 Intron 7 ASSOCIATION 20385826 Age-related macular degeneration 110.698970004 CFH FUNCTIONAL_SNP rs10737680 chr1 196679455 Intron 5b 17478 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.727 FUNCTIONAL_SNP rs1329428 chr1 196702810 Intron 5b 5877 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.862, YRI:1.0;0.707 FUNCTIONAL_SNP rs10922106 chr1 196691464 Intron 7 5469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.726 FUNCTIONAL_SNP rs7535263 chr1 196682346 Intron 7 14587 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7540032 chr1 196701284 Intron 7 4351 CEU:1.0;1.0, CHB:1.0;0.856, JPT:1.0;0.861, YRI:1.0;0.69 FUNCTIONAL_SNP rs3753395 chr1 196686652 Intron 7 10281 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs380390 chr1 196701051 Intron 6 ASSOCIATION Age-related macular degeneration 7.39794000867 CFH FUNCTIONAL_SNP rs381974 chr1 196692672 Intron 2a 8379 CEU:1.0;1.0, CHB:1.0;0.847, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs393955 chr1 196692470 Intron 5b 8581 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs379489 chr1 196693451 Intron 6 7600 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs395544 chr1 196698272 Intron 7 2779 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1329428 chr1 196702810 Intron 5b ASSOCIATION 20861866 Age-related macular degeneration 63.5228787453 CFH FUNCTIONAL_SNP rs10737680 chr1 196679455 Intron 5b 23355 CEU:1.0;1.0, CHB:1.0;0.909, JPT:0.946;0.811, YRI:1.0;1.0 FUNCTIONAL_SNP rs10922106 chr1 196691464 Intron 7 11346 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.854, YRI:1.0;0.958 FUNCTIONAL_SNP rs7535263 chr1 196682346 Intron 7 20464 CEU:1.0;0.96, CHB:1.0;0.909, JPT:1.0;0.862, YRI:1.0;0.707 FUNCTIONAL_SNP rs7540032 chr1 196701284 Intron 7 1526 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3753395 chr1 196686652 Intron 7 16158 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.862, YRI:1.0;0.707 FUNCTIONAL_SNP rs1410996 chr1 196696933 Intron 7 5877 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.862, YRI:1.0;0.707 LEAD_SNP rs426736 chr1 196760417 Intron 7 ASSOCIATION 20694013 Meningococcal disease 12.3010299957 CFHR3 FUNCTIONAL_SNP rs1065489 chr1 196709774 Coding 7 50643 CEU:1.0;1.0, CHB:0.951;0.864, JPT:1.0;0.952 FUNCTIONAL_SNP rs3753396 chr1 196695742 Coding 7 64675 CEU:1.0;0.922, CHB:0.902;0.776, JPT:1.0;0.911 FUNCTIONAL_SNP rs370953 chr1 196764365 Exon,non-coding 7 3948 CEU:1.0;1.0, CHB:0.948;0.816, JPT:1.0;0.95 FUNCTIONAL_SNP rs378283 chr1 196758286 Exon,non-coding 7 2131 CEU:1.0;0.93, CHB:1.0;0.913, JPT:1.0;0.783 FUNCTIONAL_SNP rs377298 chr1 196758541 Exon,non-coding 7 1876 CEU:1.0;0.928, CHB:1.0;0.915, JPT:1.0;0.792 FUNCTIONAL_SNP rs385390 chr1 196743927 Exon,non-coding 5b 16490 CEU:1.0;1.0, CHB:1.0;0.956, JPT:1.0;0.954, YRI:0.934;0.818 FUNCTIONAL_SNP rs643781 chr1 196760180 Intron 6 237 CEU:1.0;0.859, CHB:0.948;0.898, JPT:1.0;0.818 FUNCTIONAL_SNP rs11799380 chr1 196708455 Intron 6 51962 CEU:1.0;1.0, CHB:0.942;0.839, JPT:1.0;0.95 FUNCTIONAL_SNP rs370789 chr1 196756240 Intron 6 4177 CEU:1.0;0.93, CHB:1.0;0.796, JPT:1.0;0.669 FUNCTIONAL_SNP rs371075 chr1 196776836 Intergenic 7 16419 CEU:1.0;1.0, CHB:0.95;0.789, JPT:1.0;0.954, YRI:1.0;0.938 FUNCTIONAL_SNP rs10489456 chr1 196687515 Intron 7 72902 CEU:1.0;1.0 FUNCTIONAL_SNP rs449847 chr1 196731148 Intergenic 7 29269 CEU:1.0;0.838, YRI:1.0;0.692 FUNCTIONAL_SNP rs11801630 chr1 196692148 Intron 7 68269 CEU:0.922;0.849, CHB:0.9;0.809, JPT:1.0;0.902 FUNCTIONAL_SNP rs421820 chr1 196756300 Intron 7 4117 CEU:1.0;1.0, CHB:0.951;0.864, JPT:1.0;0.951, YRI:1.0;0.743 FUNCTIONAL_SNP rs742855 chr1 196705520 Intron 7 54897 CEU:1.0;1.0, CHB:0.905;0.819, JPT:1.0;0.907 FUNCTIONAL_SNP rs11582939 chr1 196710157 Intron 7 50260 CEU:1.0;1.0, CHB:0.951;0.864, JPT:1.0;0.952 FUNCTIONAL_SNP rs70620 chr1 196704997 Intron 7 55420 CEU:1.0;1.0, CHB:0.9;0.811, JPT:1.0;0.911 FUNCTIONAL_SNP rs11799595 chr1 196700322 Intron 7 60095 CEU:1.0;0.925, CHB:0.9;0.809, JPT:1.0;0.905 FUNCTIONAL_SNP rs644598 chr1 196766577 Intergenic 7 6160 CEU:1.0;0.927, CHB:0.95;0.789, JPT:1.0;0.954, YRI:1.0;0.938 LEAD_SNP rs6428370 chr1 196844593 Intron 6 ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 5.15490195999 CFHR1 - CFHR4 FUNCTIONAL_SNP rs7417769 chr1 196876458 Coding 7 31865 CEU:0.953;0.869, CHB:1.0;0.705, JPT:1.0;1.0, YRI:0.863;0.557 FUNCTIONAL_SNP rs12723250 chr1 196930094 Intergenic 5a 85501 CEU:0.915;0.837, CHB:1.0;0.706, JPT:1.0;0.934 FUNCTIONAL_SNP rs10801575 chr1 196852781 Intron 6 8188 CEU:0.958;0.917, CHB:1.0;0.83, JPT:1.0;1.0, YRI:0.865;0.56 FUNCTIONAL_SNP rs3748556 chr1 196926956 Intron 6 82363 CEU:0.915;0.837, CHB:1.0;0.706, JPT:1.0;0.935 FUNCTIONAL_SNP rs424535 chr1 196709223 Intron 6 135370 CEU:1.0;0.882, YRI:0.877;0.686 FUNCTIONAL_SNP rs12240143 chr1 196845017 Intron 6 424 CEU:1.0;1.0, CHB:1.0;0.848, JPT:1.0;0.811, YRI:1.0;0.892 FUNCTIONAL_SNP rs2336502 chr1 196842574 Intron 6 2019 CEU:1.0;1.0, CHB:1.0;0.93, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs16840607 chr1 196823030 Intron 7 21563 CEU:1.0;0.956, CHB:1.0;0.848, JPT:1.0;1.0 FUNCTIONAL_SNP rs3828032 chr1 196920178 Intron 7 75585 CEU:0.915;0.837, CHB:1.0;0.706, JPT:1.0;0.935 FUNCTIONAL_SNP rs6428363 chr1 196843711 Intron 7 882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs411854 chr1 196762117 Intron 7 82476 CEU:1.0;0.813 FUNCTIONAL_SNP rs9427934 chr1 196922860 Intron 7 78267 CEU:0.915;0.837, CHB:1.0;0.722, JPT:1.0;0.934 LEAD_SNP rs2786098 chr1 197325908 Intron 5b ASSOCIATION 20032318 Asthma 12.6989700043 CRB1 FUNCTIONAL_SNP rs6685222 chr1 197408660 Exon,non-coding 7 82752 CEU:1.0;0.951 FUNCTIONAL_SNP rs2786119 chr1 197329535 Exon,non-coding 5b 3627 CEU:1.0;1.0, CHB:1.0;0.885, JPT:1.0;0.881 FUNCTIONAL_SNP rs10922234 chr1 197436039 Intron 3a 110131 CEU:1.0;0.858 FUNCTIONAL_SNP rs2759656 chr1 197352969 Intron 4 27061 CEU:1.0;0.951, CHB:0.936;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs10801603 chr1 197337830 Intron 5a 11922 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs2759661 chr1 197363308 Intron 5a 37400 CEU:1.0;0.951 FUNCTIONAL_SNP rs12134409 chr1 197392067 Intron 5b 66159 CEU:1.0;0.951 FUNCTIONAL_SNP rs2821125 chr1 197312162 Intron 6 13746 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs2821132 chr1 197379842 Intron 6 53934 CEU:1.0;0.951 FUNCTIONAL_SNP rs12023045 chr1 197452162 Intergenic 6 126254 CEU:1.0;0.858 FUNCTIONAL_SNP rs17554990 chr1 197396108 Intron 6 70200 CEU:1.0;0.951 FUNCTIONAL_SNP rs2821107 chr1 197343950 Intron 6 18042 CEU:1.0;0.951, CHB:1.0;0.94, JPT:1.0;1.0 FUNCTIONAL_SNP rs2494269 chr1 197365149 Intron 6 39241 CEU:0.95;0.859 FUNCTIONAL_SNP rs2786116 chr1 197333779 Intron 6 7871 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2476019 chr1 197366143 Intron 6 40235 CEU:1.0;0.951 FUNCTIONAL_SNP rs2786101 chr1 197320786 Intron 7 5122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs2786117 chr1 197332157 Intron 7 6249 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;0.881 FUNCTIONAL_SNP rs1337167 chr1 197316435 Intron 7 9473 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.866 FUNCTIONAL_SNP rs1337168 chr1 197316239 Intron 7 9669 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs12563307 chr1 197453203 Intergenic 7 127295 CEU:1.0;0.858 FUNCTIONAL_SNP rs2476023 chr1 197351039 Intron 7 25131 CEU:1.0;0.951, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs2821115 chr1 197330185 Intron 7 4277 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2821116 chr1 197329041 Intron 7 3133 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2821117 chr1 197328594 Intron 7 2686 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1998598 chr1 197727642 Intron 7 ASSOCIATION 21102463 Crohn's disease 8.04575749056 DENND1B FUNCTIONAL_SNP rs12092948 chr1 197689967 Intron 6 37675 CEU:1.0;0.913, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.776 FUNCTIONAL_SNP rs17564924 chr1 197574134 Intron 6 153508 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.776 FUNCTIONAL_SNP rs2477073 chr1 197622528 Intron 7 105114 CEU:1.0;0.867, CHB:1.0;0.841, JPT:1.0;0.86 FUNCTIONAL_SNP rs1775452 chr1 197628029 Intron 7 99613 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12354257 chr1 197674344 Intron 7 53298 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.776 FUNCTIONAL_SNP rs11799915 chr1 197582780 Intron 7 144862 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs12134279 chr1 197781198 Intergenic 5b ASSOCIATION 21399635 Primary biliary cirrhosis 13.6989700043 RPL24P5 - C1orf53 FUNCTIONAL_SNP rs17641524 chr1 197704717 Coding 5b 76481 CEU:1.0;0.941, JPT:1.0;0.531 FUNCTIONAL_SNP rs16841912 chr1 197702476 Intron 5a 78722 CEU:1.0;0.945, CHB:0.926;0.858, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs2488398 chr1 197701376 Intron 5a 79822 CEU:1.0;0.939, CHB:0.922;0.85, JPT:1.0;0.922 FUNCTIONAL_SNP rs2488401 chr1 197702401 Intron 5a 78797 CEU:1.0;0.883, CHB:0.922;0.85, JPT:1.0;1.0 FUNCTIONAL_SNP rs1539414 chr1 197743506 Intron 5a 37692 CEU:1.0;1.0, CHB:0.926;0.857, JPT:1.0;1.0 FUNCTIONAL_SNP rs16841842 chr1 197611682 Intron 5b 169516 CEU:1.0;0.941, CHB:0.926;0.857, JPT:1.0;1.0 FUNCTIONAL_SNP rs12121863 chr1 197785420 Intergenic 6 4222 CEU:1.0;0.827, CHB:1.0;0.869, JPT:1.0;0.937, YRI:1.0;0.611 FUNCTIONAL_SNP rs2488389 chr1 197631141 Intron 6 150057 CEU:1.0;0.94, CHB:0.925;0.856, JPT:1.0;1.0 FUNCTIONAL_SNP rs2488393 chr1 197722240 Intron 6 58958 CEU:1.0;0.945, CHB:0.93;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2477077 chr1 197671115 Intron 7 110083 CEU:0.94;0.883, CHB:0.925;0.855, JPT:1.0;1.0 FUNCTIONAL_SNP rs10737693 chr1 197599030 Intron 7 182168 CEU:1.0;0.941, CHB:0.926;0.857, JPT:1.0;1.0 FUNCTIONAL_SNP rs16841904 chr1 197701992 Intron 7 79206 CEU:1.0;0.941, CHB:0.926;0.857, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs12117045 chr1 197638716 Intron 7 142482 CEU:0.939;0.831, CHB:0.926;0.857, JPT:1.0;1.0 FUNCTIONAL_SNP rs2488397 chr1 197701279 Intron 7 79919 CEU:1.0;0.945, CHB:0.93;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2224873 chr1 197645449 Intron 7 135749 CEU:0.94;0.883, JPT:1.0;0.531 FUNCTIONAL_SNP rs3900909 chr1 197757846 Intergenic 7 23352 CEU:1.0;0.827, CHB:1.0;0.857, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs12125942 chr1 197788562 Intergenic 7 7364 CEU:1.0;0.827, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.88 LEAD_SNP rs12127588 chr1 198595506 Intergenic 7 ASSOCIATION 20139978 Hematological and biochemical traits 9.15490195999 ATP6V1G3 - PTPRC LEAD_SNP rs16844716 chr1 199356516 Intron 5a ASSOCIATION 21546767 Dialysis-related mortality 5.04575749056 RPL23AP16 - NR5A2 LEAD_SNP rs3790844 chr1 200007432 Intron 5b ASSOCIATION 20101243 Pancreatic cancer 9.69897000434 NR5A2 LEAD_SNP rs7512898 chr1 200672906 Intergenic 5a ASSOCIATION 19389651 Electrocardiographic conduction measures 5.30102999566 DDX59 - CAMSAP1L1 LEAD_SNP rs7554511 chr1 200877562 Intron 4 ASSOCIATION 21297633 Ulcerative colitis 12.6989700043 C1orf106 ASSOCIATION 19915572 Ulcerative colitis 6.0 C1orf106 FUNCTIONAL_SNP rs2279943 chr1 201012042 Exon,non-coding 4 134480 CEU:0.955;0.806 FUNCTIONAL_SNP rs965321 chr1 201005502 Exon,non-coding 5b 127940 CEU:0.955;0.806 FUNCTIONAL_SNP rs3208703 chr1 200939642 Exon,non-coding 5b 62080 CEU:0.955;0.874, YRI:0.783;0.505 FUNCTIONAL_SNP rs370411 chr1 200892263 Intergenic 3a 14701 CEU:0.954;0.803 FUNCTIONAL_SNP rs12132349 chr1 200875242 Intron 4 2320 CEU:1.0;0.956, YRI:1.0;0.933 FUNCTIONAL_SNP rs296547 chr1 200892137 Intergenic 5a 14575 CEU:0.955;0.805 FUNCTIONAL_SNP rs7522462 chr1 200881595 Intron 5b 4033 CEU:1.0;1.0, YRI:1.0;0.766 FUNCTIONAL_SNP rs378672 chr1 200886333 Intergenic 5b 8771 CEU:0.913;0.8 FUNCTIONAL_SNP rs6701496 chr1 201007828 Intron 5b 130266 CEU:0.913;0.8 FUNCTIONAL_SNP rs2297909 chr1 200960307 Intron 5b 82745 CEU:0.956;0.914 FUNCTIONAL_SNP rs11579874 chr1 200920362 Intergenic 5b 42800 CEU:0.957;0.878, YRI:0.864;0.657 FUNCTIONAL_SNP rs12131796 chr1 200878727 Intron 5b 1165 CEU:1.0;1.0, YRI:0.939;0.882 FUNCTIONAL_SNP rs12126806 chr1 200963825 Intron 5b 86263 CEU:0.956;0.877 FUNCTIONAL_SNP rs296546 chr1 200891091 Intergenic 5b 13529 CEU:0.956;0.877 FUNCTIONAL_SNP rs10800746 chr1 200881392 Intron 5b 3830 CEU:1.0;1.0 FUNCTIONAL_SNP rs10494828 chr1 200957032 Intron 5b 79470 CEU:0.956;0.877, YRI:0.783;0.505 FUNCTIONAL_SNP rs404339 chr1 200886891 Intergenic 5b 9329 CEU:0.957;0.878, YRI:0.751;0.531 FUNCTIONAL_SNP rs11584383 chr1 200935866 Intergenic 5b 58304 CEU:0.956;0.877 FUNCTIONAL_SNP rs11583328 chr1 201002173 Intergenic 6 124611 CEU:0.913;0.8 FUNCTIONAL_SNP rs11576681 chr1 201004051 Intergenic 6 126489 CEU:0.913;0.8 FUNCTIONAL_SNP rs17419032 chr1 200998531 Intergenic 7 120969 CEU:0.915;0.837 FUNCTIONAL_SNP rs12122809 chr1 201014966 Intron 7 137404 CEU:0.909;0.826 FUNCTIONAL_SNP rs11583546 chr1 200902607 Intergenic 7 25045 CEU:0.947;0.852, YRI:0.918;0.599 FUNCTIONAL_SNP rs296543 chr1 200889833 Intergenic 7 12271 CEU:0.957;0.878, YRI:0.751;0.531 FUNCTIONAL_SNP rs12122721 chr1 200984480 Intron 7 106918 CEU:0.956;0.877 FUNCTIONAL_SNP rs169850 chr1 200929144 Intergenic 7 51582 CEU:0.943;0.889 LEAD_SNP rs296547 chr1 200892137 Intergenic 5a ASSOCIATION 20190752 Celiac disease 8.39794000867 C1orf81 FUNCTIONAL_SNP rs370411 chr1 200892263 Intergenic 3a 126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7554511 chr1 200877562 Intron 4 14575 CEU:0.955;0.805 FUNCTIONAL_SNP rs7522462 chr1 200881595 Intron 5b 10542 CEU:0.955;0.805 FUNCTIONAL_SNP rs378672 chr1 200886333 Intergenic 5b 5804 CEU:1.0;0.921 FUNCTIONAL_SNP rs11579874 chr1 200920362 Intergenic 5b 28225 CEU:0.956;0.842 FUNCTIONAL_SNP rs12131796 chr1 200878727 Intron 5b 13410 CEU:0.955;0.837 FUNCTIONAL_SNP rs296546 chr1 200891091 Intergenic 5b 1046 CEU:1.0;0.92 FUNCTIONAL_SNP rs10800746 chr1 200881392 Intron 5b 10745 CEU:0.954;0.803 FUNCTIONAL_SNP rs404339 chr1 200886891 Intergenic 5b 5246 CEU:1.0;0.921 FUNCTIONAL_SNP rs11583546 chr1 200902607 Intergenic 7 10470 CEU:0.947;0.812 FUNCTIONAL_SNP rs296543 chr1 200889833 Intergenic 7 2304 CEU:1.0;0.921 FUNCTIONAL_SNP rs296551 chr1 200895458 Intergenic 7 3321 CEU:1.0;0.836, JPT:1.0;0.708, YRI:1.0;0.646 FUNCTIONAL_SNP rs169850 chr1 200929144 Intergenic 7 37007 CEU:0.941;0.837 LEAD_SNP rs11584383 chr1 200935866 Intergenic 5b ASSOCIATION 20228799 Ulcerative colitis 6.69897000434 C1orf81 - KIF21B ASSOCIATION 18587394 Crohn's disease 11.0 C1orf81 - KIF21B FUNCTIONAL_SNP rs2279943 chr1 201012042 Exon,non-coding 4 76176 CEU:1.0;0.847 FUNCTIONAL_SNP rs965321 chr1 201005502 Exon,non-coding 5b 69636 CEU:1.0;0.847 FUNCTIONAL_SNP rs3208703 chr1 200939642 Exon,non-coding 5b 3776 CEU:1.0;1.0, YRI:1.0;0.775 FUNCTIONAL_SNP rs11589573 chr1 200975115 Intron 4 39249 CEU:0.952;0.907 FUNCTIONAL_SNP rs7554511 chr1 200877562 Intron 4 58304 CEU:0.956;0.877 FUNCTIONAL_SNP rs12132349 chr1 200875242 Intron 4 60624 CEU:0.952;0.828 FUNCTIONAL_SNP rs7522462 chr1 200881595 Intron 5b 54271 CEU:0.956;0.877, YRI:0.844;0.514 FUNCTIONAL_SNP rs6701496 chr1 201007828 Intron 5b 71962 CEU:1.0;0.92 FUNCTIONAL_SNP rs2297909 chr1 200960307 Intron 5b 24441 CEU:1.0;0.957, YRI:1.0;0.846 FUNCTIONAL_SNP rs11579874 chr1 200920362 Intergenic 5b 15504 CEU:1.0;0.92, YRI:0.861;0.614 FUNCTIONAL_SNP rs12131796 chr1 200878727 Intron 5b 57139 CEU:0.955;0.874 FUNCTIONAL_SNP rs12126806 chr1 200963825 Intron 5b 27959 CEU:1.0;1.0 FUNCTIONAL_SNP rs296546 chr1 200891091 Intergenic 5b 44775 CEU:0.955;0.837 FUNCTIONAL_SNP rs10800746 chr1 200881392 Intron 5b 54474 CEU:0.956;0.875 FUNCTIONAL_SNP rs10494828 chr1 200957032 Intron 5b 21166 CEU:1.0;1.0, YRI:1.0;0.775 FUNCTIONAL_SNP rs404339 chr1 200886891 Intergenic 5b 48975 CEU:0.955;0.839 FUNCTIONAL_SNP rs11583328 chr1 201002173 Intergenic 6 66307 CEU:1.0;0.92 FUNCTIONAL_SNP rs11576681 chr1 201004051 Intergenic 6 68185 CEU:1.0;0.92 FUNCTIONAL_SNP rs17419032 chr1 200998531 Intergenic 7 62665 CEU:1.0;0.959 FUNCTIONAL_SNP rs12122809 chr1 201014966 Intron 7 79100 CEU:0.953;0.869 FUNCTIONAL_SNP rs11583546 chr1 200902607 Intergenic 7 33259 CEU:1.0;0.902 FUNCTIONAL_SNP rs296543 chr1 200889833 Intergenic 7 46033 CEU:0.955;0.839 FUNCTIONAL_SNP rs12122721 chr1 200984480 Intron 7 48614 CEU:1.0;1.0 FUNCTIONAL_SNP rs169850 chr1 200929144 Intergenic 7 6722 CEU:1.0;0.944 LEAD_SNP rs2297909 chr1 200960307 Intron 5b ASSOCIATION 21743469 Ankylosing spondylitis 11.3010299957 KIF21B FUNCTIONAL_SNP rs2279943 chr1 201012042 Exon,non-coding 4 51735 CEU:1.0;0.88, CHB:0.901;0.531, JPT:0.813;0.561 FUNCTIONAL_SNP rs965321 chr1 201005502 Exon,non-coding 5b 45195 CEU:1.0;0.88 FUNCTIONAL_SNP rs3208703 chr1 200939642 Exon,non-coding 5b 20665 CEU:1.0;0.956, YRI:1.0;0.655 FUNCTIONAL_SNP rs10920091 chr1 200975064 Intron 4 14757 CEU:1.0;0.806, CHB:0.865;0.702, JPT:1.0;0.926 FUNCTIONAL_SNP rs11589573 chr1 200975115 Intron 4 14808 CEU:0.949;0.858 FUNCTIONAL_SNP rs7554511 chr1 200877562 Intron 4 82745 CEU:0.956;0.914 FUNCTIONAL_SNP rs12132349 chr1 200875242 Intron 4 85065 CEU:0.952;0.865 FUNCTIONAL_SNP rs10920090 chr1 200972454 Intron 5b 12147 CEU:1.0;0.809 FUNCTIONAL_SNP rs7522462 chr1 200881595 Intron 5b 78712 CEU:0.956;0.914 FUNCTIONAL_SNP rs6701496 chr1 201007828 Intron 5b 47521 CEU:0.955;0.874 FUNCTIONAL_SNP rs11579874 chr1 200920362 Intergenic 5b 39945 CEU:1.0;0.958, CHB:1.0;0.878, JPT:1.0;1.0, YRI:0.854;0.511 FUNCTIONAL_SNP rs12131796 chr1 200878727 Intron 5b 81580 CEU:0.955;0.913 FUNCTIONAL_SNP rs12126806 chr1 200963825 Intron 5b 3518 CEU:1.0;0.957 FUNCTIONAL_SNP rs296546 chr1 200891091 Intergenic 5b 69216 CEU:0.955;0.872, CHB:0.932;0.815, JPT:1.0;1.0 FUNCTIONAL_SNP rs10800746 chr1 200881392 Intron 5b 78915 CEU:0.956;0.913 FUNCTIONAL_SNP rs10494828 chr1 200957032 Intron 5b 3275 CEU:1.0;0.957, YRI:1.0;0.655 FUNCTIONAL_SNP rs404339 chr1 200886891 Intergenic 5b 73416 CEU:0.955;0.874, CHB:0.932;0.815, JPT:1.0;1.0 FUNCTIONAL_SNP rs11584383 chr1 200935866 Intergenic 5b 24441 CEU:1.0;0.957, YRI:1.0;0.846 FUNCTIONAL_SNP rs11583328 chr1 201002173 Intergenic 6 41866 CEU:0.955;0.874 FUNCTIONAL_SNP rs11576681 chr1 201004051 Intergenic 6 43744 CEU:0.955;0.874 FUNCTIONAL_SNP rs17419032 chr1 200998531 Intergenic 7 38224 CEU:0.956;0.915 FUNCTIONAL_SNP rs12122809 chr1 201014966 Intron 7 54659 CEU:0.906;0.82 FUNCTIONAL_SNP rs11583546 chr1 200902607 Intergenic 7 57700 CEU:1.0;0.948 FUNCTIONAL_SNP rs296543 chr1 200889833 Intergenic 7 70474 CEU:0.955;0.874, CHB:0.932;0.815, JPT:1.0;1.0 FUNCTIONAL_SNP rs12122721 chr1 200984480 Intron 7 24173 CEU:1.0;0.957 FUNCTIONAL_SNP rs169850 chr1 200929144 Intergenic 7 31163 CEU:1.0;1.0, CHB:1.0;0.67, JPT:1.0;0.513 LEAD_SNP rs860554 chr1 201262432 Intron 7 ASSOCIATION 19165232 Panic disorder 7.30102999566 PKP1 LEAD_SNP rs4950928 chr1 203155882 Intergenic 4 ASSOCIATION 18403759 YKL-40 levels 13.0 CHI3L1 LEAD_SNP rs3795578 chr1 204112984 Intron 5b ASSOCIATION 21177773 Response to acetaminophen (hepatotoxicity) 5.15490195999 ETNK2 LEAD_SNP rs12143943 chr1 204572071 Intergenic 5b ASSOCIATION 19734545 Cognitive performance 5.30102999566 MDM4 - LRRN2 FUNCTIONAL_SNP rs868097 chr1 204580139 Intron 6 8068 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7541449 chr1 204578308 Intron 6 6237 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1563827 chr1 204579139 Intron 7 7068 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1668873 chr1 205235990 Intron 4 ASSOCIATION 19820697 Mean platelet volume 20.0 TMCC2 FUNCTIONAL_SNP rs1768586 chr1 205238275 Coding 5b 2285 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;0.673, YRI:1.0;1.0 FUNCTIONAL_SNP rs1668867 chr1 205240251 Coding 4 4261 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.673 FUNCTIONAL_SNP rs1779411 chr1 205238530 Coding 5b 2540 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.696 FUNCTIONAL_SNP rs2836 chr1 205111761 Exon,non-coding 6 124229 CEU:1.0;0.803, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs1172147 chr1 205225457 Exon,non-coding 2b 10533 CEU:1.0;0.914, CHB:1.0;0.741, JPT:1.0;0.673 FUNCTIONAL_SNP rs1151787 chr1 205254238 Intergenic 2b 18248 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs17345837 chr1 205263122 Intergenic 2b 27132 CEU:1.0;0.956, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs1668871 chr1 205237137 Intron 4 1147 CEU:1.0;0.914, YRI:1.0;0.654 FUNCTIONAL_SNP rs1768587 chr1 205236432 Intron 4 442 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4951184 chr1 205240659 Intron 4 4669 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.673, YRI:1.0;1.0 FUNCTIONAL_SNP rs1172129 chr1 205244972 Intergenic 4 8982 CEU:1.0;0.881 FUNCTIONAL_SNP rs1172130 chr1 205244953 Intergenic 4 8963 CEU:1.0;0.914 FUNCTIONAL_SNP rs1172159 chr1 205207512 Intron 4 28478 CEU:0.951;0.862, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4400674 chr1 205218425 Intron 4 17565 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1172111 chr1 205232980 Intron 4 3010 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.673, YRI:1.0;1.0 FUNCTIONAL_SNP rs6692706 chr1 205158561 Intron 4 77429 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs748012 chr1 205216573 Intron 4 19417 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7367930 chr1 205235512 Intron 4 478 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12128254 chr1 205268097 Intergenic 4 32107 CEU:1.0;0.956, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs11576867 chr1 205064676 Intron 5a 171314 CEU:1.0;0.803, CHB:1.0;0.741, JPT:1.0;0.673 FUNCTIONAL_SNP rs1668869 chr1 205239779 Intron 5b 3789 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17345816 chr1 205262868 Intergenic 5b 26878 CEU:1.0;0.956, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs1151784 chr1 205232447 Intron 5b 3543 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1151785 chr1 205232299 Intron 5b 3691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1172139 chr1 205213962 Intron 5b 22028 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1172161 chr1 205206495 Intron 5b 29495 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1172137 chr1 205246061 Intergenic 5b 10071 CEU:1.0;0.862 FUNCTIONAL_SNP rs12140422 chr1 205187981 Intergenic 6 48009 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1172125 chr1 205258442 Intergenic 6 22452 CEU:1.0;0.914 FUNCTIONAL_SNP rs1180734 chr1 205255438 Intergenic 6 19448 CEU:1.0;0.956 FUNCTIONAL_SNP rs7531256 chr1 205191202 Intergenic 6 44788 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12144980 chr1 205185104 Intergenic 6 50886 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11577406 chr1 205065733 Intron 6 170257 CEU:1.0;0.803, CHB:1.0;0.741, JPT:1.0;0.673 FUNCTIONAL_SNP rs12125465 chr1 205074854 Intron 7 161136 CEU:1.0;0.803, CHB:1.0;0.741, JPT:1.0;0.73 FUNCTIONAL_SNP rs1172152 chr1 205220718 Intron 7 15272 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12092492 chr1 205251880 Intergenic 7 15890 CEU:1.0;0.955, JPT:1.0;0.568 FUNCTIONAL_SNP rs11240360 chr1 205083865 Intron 7 152125 CEU:1.0;0.803, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs3738155 chr1 205074424 Intron 7 161566 CEU:1.0;0.801, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs1172136 chr1 205247097 Intergenic 7 11107 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs12748961 chr1 205676263 Intergenic 5a ASSOCIATION 21738478 White blood cell types 7.39794000867 SLC45A3 - NUCKS1 FUNCTIONAL_SNP rs3805 chr1 205683355 Exon,non-coding 5a 7092 CEU:1.0;1.0, CHB:1.0;0.956, JPT:0.952;0.907, YRI:1.0;1.0 LEAD_SNP rs823128 chr1 205713378 Intron 4 ASSOCIATION 19915575 Parkinson's disease 7.15490195999 NUCKS1 FUNCTIONAL_SNP rs823135 chr1 205738166 Exon,non-coding 5b 24788 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:0.958;0.763 FUNCTIONAL_SNP rs823136 chr1 205738251 Exon,non-coding 5b 24873 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:0.917;0.725 FUNCTIONAL_SNP rs823138 chr1 205739192 Exon,non-coding 5b 25814 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:0.953;0.766 FUNCTIONAL_SNP rs844005 chr1 205737450 Exon,non-coding 7 24072 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:0.957;0.759 FUNCTIONAL_SNP rs865402 chr1 205719857 Intergenic 4 6479 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs823142 chr1 205741816 Intron 4 28438 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:0.961;0.856 FUNCTIONAL_SNP rs823153 chr1 205736563 Intergenic 4 23185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:0.957;0.759 FUNCTIONAL_SNP rs16856135 chr1 205637966 Intron 5b 75412 CEU:1.0;1.0, JPT:0.767;0.589 FUNCTIONAL_SNP rs823113 chr1 205711237 Intron 5b 2141 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12404824 chr1 205655820 Intergenic 5b 57558 CEU:1.0;1.0, CHB:0.932;0.815, JPT:0.856;0.643 FUNCTIONAL_SNP rs1775144 chr1 205756012 Intergenic 6 42634 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:0.922;0.82 FUNCTIONAL_SNP rs823098 chr1 205670726 Intergenic 6 42652 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;0.811, YRI:0.893;0.511 FUNCTIONAL_SNP rs823108 chr1 205693601 Intron 6 19777 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1620334 chr1 205697845 Intron 6 15533 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12402185 chr1 205655549 Intergenic 7 57829 CEU:1.0;1.0, CHB:0.932;0.815, JPT:0.883;0.699 FUNCTIONAL_SNP rs823093 chr1 205689227 Intron 7 24151 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs823117 chr1 205723513 Intergenic 7 10135 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs823123 chr1 205725346 Intergenic 7 11968 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.718 FUNCTIONAL_SNP rs823146 chr1 205732814 Intergenic 7 19436 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:0.916;0.697 FUNCTIONAL_SNP rs823147 chr1 205733138 Intergenic 7 19760 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877, YRI:0.952;0.762 FUNCTIONAL_SNP rs1772146 chr1 205696521 Intron 7 16857 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1772147 chr1 205696671 Intron 7 16707 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs947211 chr1 205752665 Intergenic 7 ASSOCIATION 19915576 Parkinson's disease 11.6989700043 RAB7L1 - SLC41A1 FUNCTIONAL_SNP rs823144 chr1 205744546 Exon,non-coding 2b 8119 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs885224 chr1 205753097 Intergenic 5b 432 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 LEAD_SNP rs823156 chr1 205764640 Intron 5a ASSOCIATION 21738487 Parkinson's disease 7.0 SLC41A1 LEAD_SNP rs11240594 chr1 205896235 Intron 7 ASSOCIATION 21107309 Response to antipsychotic treatment 7.0 SLC26A9 FUNCTIONAL_SNP rs7538856 chr1 205894017 Intron 6 2218 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs3024505 chr1 206939904 Intergenic 2b ASSOCIATION 21297633 Ulcerative colitis 16.2218487496 RPS14P1 - IL10 ASSOCIATION 21102463 Crohn's disease 13.6989700043 RPS14P1 - IL10 ASSOCIATION 20228799 Ulcerative colitis 8.0 RPS14P1 - IL10 ASSOCIATION 19430480 Type 1 diabetes 8.69897000434 RPS14P1 - IL10 ASSOCIATION 18836448 Ulcerative colitis 12.0 RPS14P1 - IL10 FUNCTIONAL_SNP rs3024493 chr1 206943968 Intron 2b 4064 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3024495 chr1 206942413 Intron 5a 2509 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3024493 chr1 206943968 Intron 2b ASSOCIATION 20228798 Ulcerative colitis 12.0 IL10 ASSOCIATION 19915572 Ulcerative colitis 7.09691001301 IL10 FUNCTIONAL_SNP rs3024505 chr1 206939904 Intergenic 2b 4064 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3024495 chr1 206942413 Intron 5a 1555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1518111 chr1 206944645 Intron 4 ASSOCIATION 20622878 Behcet's disease 17.3979400087 IL10 FUNCTIONAL_SNP rs1800872 chr1 206946407 Intergenic 5a 1762 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1800871 chr1 206946634 Intergenic 5b 1989 CEU:1.0;0.928, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3024490 chr1 206945311 Intron 6 666 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;0.946, YRI:1.0;1.0 LEAD_SNP rs1800871 chr1 206946634 Intergenic 5b ASSOCIATION 20622879 Behcet's disease 14.0 IL10 FUNCTIONAL_SNP rs1518111 chr1 206944645 Intron 4 1989 CEU:1.0;0.928, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1800872 chr1 206946407 Intergenic 5a 227 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1554286 chr1 206944233 Intron 5a 2401 CEU:1.0;0.851, CHB:1.0;0.93, JPT:1.0;0.941, YRI:1.0;1.0 FUNCTIONAL_SNP rs3024490 chr1 206945311 Intron 6 1323 CEU:1.0;0.928, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;1.0 LEAD_SNP rs3813948 chr1 207269858 Intron 7 ASSOCIATION 20212171 Plasma C4b binding protein levels 9.39794000867 C4BPB LEAD_SNP rs17045328 chr1 207652176 Intron 7 ASSOCIATION 21490949 Type 2 diabetes 5.15490195999 CR2 FUNCTIONAL_SNP rs11808746 chr1 207624861 Intergenic 7 27315 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3818361 chr1 207784968 Intron 6 ASSOCIATION 21460840 Alzheimer's disease 13.3979400087 CR1 FUNCTIONAL_SNP rs4844600 chr1 207679307 Coding 7 105661 CEU:1.0;0.944, CHB:0.812;0.561, JPT:0.937;0.784 FUNCTIONAL_SNP rs2296160 chr1 207795320 Coding 7 10352 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6701713 chr1 207786289 Intron 4 1321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4844610 chr1 207802552 Intron 5a 17584 CEU:1.0;0.947 FUNCTIONAL_SNP rs6656401 chr1 207692049 Intron 5b 92919 CEU:0.947;0.897 FUNCTIONAL_SNP rs1408077 chr1 207804141 Intron 7 19173 CEU:1.0;0.948, CHB:1.0;0.947, JPT:1.0;1.0 FUNCTIONAL_SNP rs1408078 chr1 207800555 Intron 7 15587 CEU:1.0;0.944, CHB:1.0;0.947, JPT:1.0;1.0 LEAD_SNP rs6701713 chr1 207786289 Intron 4 ASSOCIATION 21460841 Alzheimer's disease (late onset) 9.30102999566 CR1 FUNCTIONAL_SNP rs4844600 chr1 207679307 Coding 7 106982 CEU:1.0;0.944, CHB:0.812;0.561, JPT:0.937;0.784 FUNCTIONAL_SNP rs2296160 chr1 207795320 Coding 7 9031 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4844610 chr1 207802552 Intron 5a 16263 CEU:1.0;0.947 FUNCTIONAL_SNP rs6656401 chr1 207692049 Intron 5b 94240 CEU:0.947;0.897 FUNCTIONAL_SNP rs3818361 chr1 207784968 Intron 6 1321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1408077 chr1 207804141 Intron 7 17852 CEU:1.0;0.948, CHB:1.0;0.947, JPT:1.0;1.0 FUNCTIONAL_SNP rs1408078 chr1 207800555 Intron 7 14266 CEU:1.0;0.944, CHB:1.0;0.947, JPT:1.0;1.0 LEAD_SNP rs12034383 chr1 207803595 Intron 5b ASSOCIATION 21700265 Erythrocyte sedimentation rate 27.6989700043 CR1 FUNCTIONAL_SNP rs3886100 chr1 207739127 Intron 2b 64468 CEU:1.0;0.847, CHB:0.951;0.864, JPT:1.0;0.953, YRI:1.0;0.536 FUNCTIONAL_SNP rs7542544 chr1 207786223 Intron 4 17372 CEU:1.0;0.959, CHB:0.952;0.906, JPT:1.0;0.95, YRI:1.0;0.536 FUNCTIONAL_SNP rs2274566 chr1 207753345 Intron 5a 50250 CEU:1.0;0.923, CHB:0.953;0.908, JPT:1.0;0.953, YRI:1.0;0.536 FUNCTIONAL_SNP rs11576522 chr1 207789269 Intron 5b 14326 CEU:0.956;0.81, CHB:0.953;0.908, JPT:1.0;1.0, YRI:1.0;0.536 FUNCTIONAL_SNP rs12041437 chr1 207803264 Intron 5b 331 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11803956 chr1 207803021 Intron 6 574 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.685 FUNCTIONAL_SNP rs7519119 chr1 207786152 Intron 7 17443 CEU:1.0;0.953, CHB:0.946;0.85, JPT:1.0;1.0 LEAD_SNP rs7527798 chr1 207872290 Intron 4 ASSOCIATION 21700265 Erythrocyte sedimentation rate 8.69897000434 CR1L FUNCTIONAL_SNP rs17186897 chr1 207839505 Intron 5b 32785 CEU:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4844614 chr1 207875175 Intron 7 ASSOCIATION 19060910 LDL cholesterol 6.69897000434 CR1L LEAD_SNP rs12731740 chr1 208024820 Intron 7 ASSOCIATION 19396169 Biomedical quantitative traits 8.52287874528 C1orf132 LEAD_SNP rs2745967 chr1 208128722 Intergenic 5a ASSOCIATION 20639392 Resting heart rate 7.15490195999 CD34 - PLXNA2 FUNCTIONAL_SNP rs11579848 chr1 208128855 Intergenic 4 133 CEU:1.0;0.852, CHB:1.0;0.79, JPT:1.0;0.659 FUNCTIONAL_SNP rs11578508 chr1 208129065 Intergenic 5a 343 CEU:1.0;0.852, CHB:1.0;0.79, JPT:1.0;0.659 FUNCTIONAL_SNP rs11579530 chr1 208130418 Intergenic 5b 1696 CEU:1.0;0.852, CHB:1.0;0.79, JPT:1.0;0.659 FUNCTIONAL_SNP rs11581407 chr1 208131281 Intergenic 5b 2559 CEU:1.0;0.852, CHB:1.0;0.79, JPT:1.0;0.658 FUNCTIONAL_SNP rs11118962 chr1 208134272 Intergenic 5b 5550 CEU:1.0;0.852, CHB:1.0;0.79, JPT:1.0;0.659 FUNCTIONAL_SNP rs11579772 chr1 208128373 Intergenic 5b 349 CEU:1.0;0.852, CHB:1.0;0.79, JPT:1.0;0.659 FUNCTIONAL_SNP rs1212304 chr1 208118579 Intergenic 6 10143 CEU:1.0;0.821, CHB:1.0;0.602, JPT:1.0;1.0, YRI:0.902;0.54 FUNCTIONAL_SNP rs7517152 chr1 208127073 Intergenic 6 1649 CEU:1.0;0.818, CHB:1.0;0.79, JPT:1.0;0.659 FUNCTIONAL_SNP rs1074327 chr1 208127490 Intergenic 7 1232 CEU:1.0;0.852, CHB:1.0;0.79, JPT:1.0;0.659 FUNCTIONAL_SNP rs1932825 chr1 208125773 Intergenic 7 2949 CEU:1.0;0.852, CHB:1.0;0.79, JPT:1.0;0.659 FUNCTIONAL_SNP rs1028400 chr1 208113731 Intergenic 7 14991 CEU:1.0;0.821, CHB:1.0;0.602, JPT:1.0;1.0, YRI:1.0;0.545 FUNCTIONAL_SNP rs12065224 chr1 208129688 Intergenic 7 966 CEU:1.0;0.852, CHB:1.0;0.79, JPT:1.0;0.659 FUNCTIONAL_SNP rs12066493 chr1 208130104 Intergenic 7 1382 CEU:1.0;0.852, CHB:1.0;0.79, JPT:1.0;0.659 FUNCTIONAL_SNP rs7552993 chr1 208130905 Intergenic 7 2183 CEU:1.0;0.848, CHB:1.0;0.79, JPT:1.0;0.659 LEAD_SNP rs17259784 chr1 208757586 Intergenic 5b ASSOCIATION 21348951 Cardiac hypertrophy 5.22184874962 PLXNA2 - RPS26P13 FUNCTIONAL_SNP rs6678378 chr1 208764835 Intergenic 7 7249 CEU:1.0;0.887, YRI:1.0;0.66 FUNCTIONAL_SNP rs17259798 chr1 208763541 Intergenic 7 5955 CEU:0.934;0.871, YRI:1.0;1.0 FUNCTIONAL_SNP rs17187582 chr1 208755804 Intergenic 7 1782 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10863790 chr1 209988047 Intergenic 5b ASSOCIATION 20436469 Cleft lip 14.0 IRF6 - C1orf107 FUNCTIONAL_SNP rs4844496 chr1 210030755 Exon,non-coding 5b 42708 CEU:1.0;1.0, CHB:0.813;0.561, JPT:0.921;0.547 FUNCTIONAL_SNP rs1883332 chr1 210046786 Intergenic 4 58739 CEU:1.0;1.0, CHB:0.818;0.599 FUNCTIONAL_SNP rs17015268 chr1 209988989 Intergenic 4 942 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2235377 chr1 209975392 Intron 4 12655 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12405750 chr1 209977844 Intron 5a 10203 CEU:1.0;1.0 FUNCTIONAL_SNP rs12081405 chr1 209952266 Intron 5a 35781 CEU:1.0;1.0, CHB:1.0;0.636, JPT:0.922;0.696 FUNCTIONAL_SNP rs12064085 chr1 210050077 Intergenic 5b 62030 CEU:1.0;1.0 FUNCTIONAL_SNP rs12083685 chr1 209951602 Intron 5b 36445 CEU:1.0;1.0, CHB:1.0;0.646, JPT:0.946;0.849 FUNCTIONAL_SNP rs12080691 chr1 210007416 Intron 6 19369 CEU:1.0;1.0 FUNCTIONAL_SNP rs12058100 chr1 209950132 Intron 6 37915 CEU:1.0;1.0 FUNCTIONAL_SNP rs17015217 chr1 209966629 Intron 6 21418 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.838 FUNCTIONAL_SNP rs4140636 chr1 209947885 Intron 6 40162 CEU:1.0;1.0, CHB:1.0;0.646, JPT:0.946;0.849 FUNCTIONAL_SNP rs10489343 chr1 209984824 Intergenic 6 3223 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12075674 chr1 209995470 Intergenic 7 7423 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4329516 chr1 210022901 Intron 7 34854 CEU:1.0;1.0 FUNCTIONAL_SNP rs17015255 chr1 209982738 Intergenic 7 5309 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs642961 chr1 209989270 Intergenic 4 ASSOCIATION 19270707 Nonsyndromic cleft lip with or without cleft palate 5.69897000434 IRF6 - C1orf107 LEAD_SNP rs17706439 chr1 213855588 Intergenic 6 ASSOCIATION 20031603 RR interval (heart rate) 5.52287874528 RPL31P13 - PROX1 FUNCTIONAL_SNP rs17757324 chr1 213855331 Intergenic 5a 257 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10465695 chr1 213856570 Intergenic 6 982 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4518871 chr1 213853968 Intergenic 7 1620 CEU:1.0;0.933 LEAD_SNP rs340874 chr1 214159256 Intron 5b ASSOCIATION 20081858 Fasting glucose-related traits 5.30102999566 RPL31P13 - PROX1 ASSOCIATION 20081858 Fasting glucose-related traits 11.15490196 RPL31P13 - PROX1 LEAD_SNP rs438034 chr1 214830617 Coding 7 ASSOCIATION 21659360 Response to antineoplastic agents 5.30102999566 CENPF FUNCTIONAL_SNP rs2070064 chr1 214787130 Coding 5b 43487 CEU:0.957;0.878, JPT:1.0;0.526 FUNCTIONAL_SNP rs3795521 chr1 214814571 Coding 7 16046 CEU:0.96;0.885, JPT:1.0;0.526 FUNCTIONAL_SNP rs3748697 chr1 214820099 Coding 7 10518 CEU:1.0;0.962, JPT:1.0;0.526 FUNCTIONAL_SNP rs7289 chr1 214837110 Coding 7 6493 CEU:0.961;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.89 FUNCTIONAL_SNP rs179813 chr1 214827062 Exon,non-coding 7 3555 CEU:1.0;0.808, CHB:1.0;0.565, JPT:1.0;0.601 FUNCTIONAL_SNP rs12117230 chr1 214868263 Intergenic 2b 37646 CEU:0.958;0.815 FUNCTIONAL_SNP rs335546 chr1 214839175 Intergenic 4 8558 CEU:0.961;0.923, CHB:1.0;0.779, JPT:1.0;0.877, YRI:0.883;0.779 FUNCTIONAL_SNP rs2923166 chr1 214831679 Intron 5b 1062 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;0.864, YRI:1.0;0.887 FUNCTIONAL_SNP rs435043 chr1 214828812 Intron 5b 1805 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs335523 chr1 214826364 Intron 6 4253 CEU:1.0;0.855, CHB:1.0;0.632, JPT:1.0;0.632, YRI:1.0;0.536 FUNCTIONAL_SNP rs6700334 chr1 214870167 Intergenic 6 39550 CEU:0.954;0.803 FUNCTIONAL_SNP rs7553478 chr1 214870992 Intergenic 6 40375 CEU:0.958;0.815 FUNCTIONAL_SNP rs376776 chr1 214830142 Intron 6 475 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.883 FUNCTIONAL_SNP rs12117398 chr1 214868797 Intergenic 7 38180 CEU:0.958;0.815 FUNCTIONAL_SNP rs369801 chr1 214829916 Intron 7 701 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs6682571 chr1 214872403 Intergenic 7 41786 CEU:0.958;0.815 FUNCTIONAL_SNP rs374934 chr1 214828350 Intron 7 2267 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6678047 chr1 214863126 Intergenic 7 32509 CEU:0.959;0.849, JPT:0.852;0.565 FUNCTIONAL_SNP rs335527 chr1 214825754 Intron 7 4863 CEU:1.0;0.96, CHB:0.85;0.505, JPT:1.0;0.575, YRI:1.0;0.58 FUNCTIONAL_SNP rs444971 chr1 214831429 Intron 7 812 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs6671279 chr1 214872304 Intergenic 7 41687 CEU:0.958;0.815 FUNCTIONAL_SNP rs12121403 chr1 214807473 Intron 7 23144 CEU:0.96;0.885, JPT:1.0;0.526 FUNCTIONAL_SNP rs377293 chr1 214833534 Intron 7 2917 CEU:0.961;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs440660 chr1 214831084 Intron 7 467 CEU:1.0;0.872, CHB:1.0;1.0, JPT:1.0;0.843 FUNCTIONAL_SNP rs390110 chr1 214828433 Intron 7 2184 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.859 FUNCTIONAL_SNP rs448617 chr1 214831287 Intron 7 670 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 LEAD_SNP rs12757165 chr1 216716537 Intron 7 ASSOCIATION 21348951 Cardiac hypertrophy 7.0 ESRRG FUNCTIONAL_SNP rs12145418 chr1 216716320 Intron 4 217 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.95, YRI:1.0;0.88 FUNCTIONAL_SNP rs4147271 chr1 216717338 Intron 5a 801 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs4846528 chr1 216727323 Intron 5b 10786 CEU:1.0;1.0, CHB:1.0;0.596, JPT:1.0;0.777 FUNCTIONAL_SNP rs10442688 chr1 216726333 Intron 6 9796 CEU:1.0;1.0, CHB:1.0;0.882, JPT:1.0;0.945 FUNCTIONAL_SNP rs6673295 chr1 216721098 Intron 6 4561 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.901, YRI:1.0;1.0 FUNCTIONAL_SNP rs7534782 chr1 216726728 Intron 6 10191 CEU:1.0;1.0, CHB:1.0;0.778, JPT:1.0;0.947 FUNCTIONAL_SNP rs17611421 chr1 216725875 Intron 7 9338 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.901 FUNCTIONAL_SNP rs11117612 chr1 216722328 Intron 7 5791 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs11117613 chr1 216722387 Intron 7 5850 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.901, YRI:1.0;0.88 FUNCTIONAL_SNP rs10495027 chr1 216722622 Intron 7 6085 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.855, YRI:1.0;0.88 FUNCTIONAL_SNP rs10495029 chr1 216725983 Intron 7 9446 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.95 FUNCTIONAL_SNP rs3929399 chr1 216718378 Intron 7 1841 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs10442683 chr1 216728033 Intron 7 11496 CEU:1.0;1.0, CHB:1.0;0.814, JPT:1.0;0.876 FUNCTIONAL_SNP rs4147269 chr1 216716976 Intron 7 439 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs4294475 chr1 216718217 Intron 7 1680 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6673524 chr1 216721370 Intron 7 4833 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.901, YRI:1.0;1.0 LEAD_SNP rs1436900 chr1 217058479 Intron 6 ASSOCIATION 20395239 Optic disc size (cup) 5.15490195999 ESRRG FUNCTIONAL_SNP rs2043670 chr1 217061060 Intron 5a 2581 CEU:1.0;0.961, YRI:1.0;1.0 FUNCTIONAL_SNP rs1370150 chr1 217059640 Intron 7 1161 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2576264 chr1 217055987 Intron 7 2492 CEU:1.0;0.923, YRI:1.0;1.0 LEAD_SNP rs1497828 chr1 217527024 Intergenic 7 ASSOCIATION 21546767 Dialysis-related mortality 5.39794000867 ESRRG - GPATCH2 FUNCTIONAL_SNP rs2646810 chr1 217523112 Intergenic 7 3912 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1566178 chr1 217526431 Intergenic 7 593 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1018040 chr1 218705814 Intergenic 6 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.30102999566 TGFB2 - LYPLAL1 ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.09691001301 TGFB2 - LYPLAL1 LEAD_SNP rs2605100 chr1 219644224 Intergenic 5b ASSOCIATION 19557161 Adiposity 7.52287874528 LOC728510 FUNCTIONAL_SNP rs1340098 chr1 219649771 Intergenic 5a 5547 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0 FUNCTIONAL_SNP rs2820427 chr1 219657124 Intergenic 5a 12900 CEU:1.0;0.955, CHB:1.0;0.745, JPT:1.0;0.888 FUNCTIONAL_SNP rs2605091 chr1 219640305 Intergenic 5b 3919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2605092 chr1 219640389 Intergenic 5b 3835 CEU:1.0;0.957, CHB:1.0;0.787, JPT:1.0;0.862 FUNCTIONAL_SNP rs2605097 chr1 219642109 Intergenic 5b 2115 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1531095 chr1 219656094 Intergenic 5b 11870 CEU:1.0;0.954, CHB:1.0;0.685, JPT:1.0;0.873 FUNCTIONAL_SNP rs2605108 chr1 219652009 Intergenic 6 7785 CEU:1.0;0.955, CHB:1.0;0.692, JPT:1.0;0.863 FUNCTIONAL_SNP rs1531096 chr1 219656701 Intergenic 6 12477 CEU:1.0;0.955, CHB:1.0;0.91, JPT:1.0;1.0 FUNCTIONAL_SNP rs2605101 chr1 219644496 Intergenic 6 272 CEU:1.0;0.955, CHB:1.0;0.788, JPT:1.0;0.877 FUNCTIONAL_SNP rs2605109 chr1 219653354 Intergenic 6 9130 CEU:1.0;0.955, CHB:0.906;0.647, JPT:1.0;0.888 FUNCTIONAL_SNP rs2820436 chr1 219640680 Intergenic 6 3544 CEU:1.0;0.956, CHB:1.0;0.788, JPT:1.0;0.876 FUNCTIONAL_SNP rs2605095 chr1 219641450 Intergenic 7 2774 CEU:1.0;0.957, CHB:1.0;0.777, JPT:1.0;0.888 FUNCTIONAL_SNP rs2605096 chr1 219641900 Intergenic 7 2324 CEU:1.0;0.957, CHB:1.0;0.798, JPT:1.0;0.888 FUNCTIONAL_SNP rs2605098 chr1 219643649 Intergenic 7 575 CEU:1.0;0.957, CHB:1.0;0.798, JPT:1.0;0.888 FUNCTIONAL_SNP rs2605107 chr1 219650741 Intergenic 7 6517 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0 FUNCTIONAL_SNP rs2605110 chr1 219654392 Intergenic 7 10168 CEU:1.0;0.957, CHB:1.0;0.745, JPT:1.0;0.888 FUNCTIONAL_SNP rs2791550 chr1 219655369 Intergenic 7 11145 CEU:1.0;0.957, CHB:1.0;0.744, JPT:1.0;0.888 FUNCTIONAL_SNP rs2791551 chr1 219655031 Intergenic 7 10807 CEU:1.0;0.957, CHB:1.0;0.691, JPT:1.0;0.887 FUNCTIONAL_SNP rs2791552 chr1 219652033 Intergenic 7 7809 CEU:1.0;0.955, CHB:1.0;0.707, JPT:1.0;0.888 FUNCTIONAL_SNP rs2820468 chr1 219673705 Intergenic 7 29481 CEU:0.946;0.809, CHB:1.0;0.516 FUNCTIONAL_SNP rs1563353 chr1 219653026 Intergenic 7 8802 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0 FUNCTIONAL_SNP rs1563355 chr1 219653101 Intergenic 7 8877 CEU:1.0;0.955, CHB:1.0;0.745, JPT:1.0;0.888 FUNCTIONAL_SNP rs1563352 chr1 219652795 Intergenic 7 8571 CEU:1.0;0.955, JPT:1.0;0.887 FUNCTIONAL_SNP rs2820430 chr1 219651779 Intergenic 7 7555 CEU:1.0;1.0, CHB:0.898;0.735, JPT:1.0;1.0 LEAD_SNP rs4846567 chr1 219750717 Intergenic 5b ASSOCIATION 20935629 Waist-hip ratio 32.3010299957 LYPLAL1 - ZC3H11B FUNCTIONAL_SNP rs2820443 chr1 219753509 Intergenic 2b 2792 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2785981 chr1 219717774 Intergenic 4 32943 CEU:1.0;0.836, CHB:0.944;0.844, JPT:0.938;0.879, YRI:1.0;0.66 FUNCTIONAL_SNP rs1415288 chr1 219742545 Intergenic 5a 8172 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2820427 chr1 219657124 Intergenic 5a 93593 CEU:0.951;0.825 FUNCTIONAL_SNP rs1572505 chr1 219708773 Intergenic 5b 41944 CEU:1.0;0.836, CHB:0.944;0.844, JPT:0.938;0.879, YRI:1.0;0.66 FUNCTIONAL_SNP rs4846565 chr1 219722104 Intergenic 5b 28613 CEU:1.0;0.836, CHB:0.944;0.844, JPT:0.938;0.879, YRI:1.0;0.66 FUNCTIONAL_SNP rs3001032 chr1 219727779 Intergenic 6 22938 CEU:1.0;0.913, CHB:0.944;0.844, JPT:0.936;0.824 FUNCTIONAL_SNP rs10779358 chr1 219713730 Intergenic 6 36987 CEU:1.0;0.836, CHB:0.944;0.844, JPT:0.936;0.824 FUNCTIONAL_SNP rs2820446 chr1 219748818 Intergenic 6 1899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1415293 chr1 219730006 Intergenic 7 20711 CEU:1.0;0.908, CHB:0.942;0.839, JPT:0.932;0.869 FUNCTIONAL_SNP rs2785990 chr1 219687432 Intergenic 7 63285 CEU:1.0;0.8, CHB:0.866;0.601, JPT:0.934;0.773 FUNCTIONAL_SNP rs2785998 chr1 219734998 Intergenic 7 15719 CEU:1.0;0.955, CHB:0.944;0.844, JPT:0.938;0.879, YRI:1.0;0.66 FUNCTIONAL_SNP rs1563355 chr1 219653101 Intergenic 7 97616 CEU:0.951;0.825 FUNCTIONAL_SNP rs4846302 chr1 219730586 Intron 7 20131 CEU:1.0;0.955, CHB:0.944;0.844, JPT:0.938;0.879, YRI:1.0;0.66 FUNCTIONAL_SNP rs2494196 chr1 219762581 Intergenic 7 11864 CEU:1.0;0.825, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs1337098 chr1 219710186 Intergenic 7 40531 CEU:1.0;0.836, CHB:0.94;0.836, JPT:0.938;0.879 FUNCTIONAL_SNP rs1337101 chr1 219726100 Intergenic 7 24617 CEU:1.0;0.913, CHB:0.944;0.844, JPT:0.935;0.874, YRI:1.0;0.66 FUNCTIONAL_SNP rs2820441 chr1 219734960 Intergenic 7 15757 CEU:1.0;0.955, CHB:0.944;0.844, JPT:0.938;0.879, YRI:1.0;0.66 FUNCTIONAL_SNP rs2820444 chr1 219741820 Intergenic 7 8897 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2820449 chr1 219714999 Intergenic 7 35718 CEU:1.0;0.836, CHB:0.944;0.844, JPT:0.938;0.879 FUNCTIONAL_SNP rs4500327 chr1 219705205 Intergenic 7 45512 CEU:1.0;0.8, CHB:0.93;0.654, JPT:0.783;0.54, YRI:1.0;0.66 FUNCTIONAL_SNP rs2820468 chr1 219673705 Intergenic 7 77012 CEU:1.0;0.814, CHB:0.927;0.644, JPT:0.927;0.859 LEAD_SNP rs337161 chr1 220914920 Intergenic 5b ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 5.52287874528 C1orf115 - MOSC2 LEAD_SNP rs1494373 chr1 220929356 Intron 6 ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 5.22184874962 MOSC2 LEAD_SNP rs6693017 chr1 220977333 Intron 4 ASSOCIATION 21493818 Monocyte early outgrowth colony forming units 6.52287874528 MOSC1 FUNCTIONAL_SNP rs17008835 chr1 220979429 Intron 7 2096 CEU:1.0;0.89, CHB:1.0;0.618, JPT:1.0;0.782 FUNCTIONAL_SNP rs7530493 chr1 220989700 Intergenic 7 12367 CEU:1.0;0.89, CHB:1.0;0.944, JPT:1.0;0.951 LEAD_SNP rs12073837 chr1 221010205 Intergenic 7 ASSOCIATION 21326311 F-cell distribution 5.69897000434 LOC100129376 FUNCTIONAL_SNP rs1494368 chr1 221004168 Exon,non-coding 7 6037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs2378425 chr1 221016058 Intergenic 5b 5853 CEU:1.0;0.944, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.816 FUNCTIONAL_SNP rs1335919 chr1 221018385 Intergenic 6 8180 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs1494372 chr1 221014621 Intergenic 7 4416 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs984676 chr1 221008422 Intergenic 7 1783 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11118620 chr1 221028508 Intergenic 6 ASSOCIATION 20445134 Heart failure 5.15490195999 LOC100129376 FUNCTIONAL_SNP rs4587570 chr1 221034035 Intergenic 7 5527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11118622 chr1 221042175 Intergenic 7 13667 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12733856 chr1 221551539 Intergenic 6 ASSOCIATION 20400778 Mortality among heart failure patients 5.52287874528 HLX - DUSP10 FUNCTIONAL_SNP rs4382729 chr1 221509332 Exon,non-coding 4 42207 CEU:1.0;0.939 FUNCTIONAL_SNP rs3123738 chr1 221555332 Intergenic 4 3793 CEU:1.0;0.939 FUNCTIONAL_SNP rs6685472 chr1 221508934 Intron 4 42605 CEU:1.0;0.938 FUNCTIONAL_SNP rs7532900 chr1 221537345 Intergenic 5b 14194 CEU:1.0;0.936 FUNCTIONAL_SNP rs6666470 chr1 221491463 Intergenic 5b 60076 CEU:1.0;0.939 FUNCTIONAL_SNP rs4846343 chr1 221488155 Intergenic 6 63384 CEU:1.0;0.936 FUNCTIONAL_SNP rs6660101 chr1 221484024 Intergenic 6 67515 CEU:1.0;0.939 FUNCTIONAL_SNP rs1459234 chr1 221550092 Intergenic 6 1447 CEU:0.938;0.879 FUNCTIONAL_SNP rs1380256 chr1 221554701 Intergenic 7 3162 CEU:1.0;0.938 FUNCTIONAL_SNP rs11590194 chr1 221517523 Intergenic 7 34016 CEU:1.0;0.921 FUNCTIONAL_SNP rs11584695 chr1 221503370 Intergenic 7 48169 CEU:1.0;0.938 FUNCTIONAL_SNP rs4399167 chr1 221493176 Intergenic 7 58363 CEU:1.0;0.939 FUNCTIONAL_SNP rs11578843 chr1 221547600 Intergenic 7 3939 CEU:1.0;0.939 FUNCTIONAL_SNP rs4846714 chr1 221542076 Intergenic 7 9463 CEU:1.0;0.939 LEAD_SNP rs12032381 chr1 221617076 Intergenic 7 ASSOCIATION 20971583 Dupuytren's disease 5.22184874962 HLX - DUSP10 LEAD_SNP rs6691170 chr1 222045446 Intergenic 7 ASSOCIATION 20972440 Colorectal cancer 9.0 DUSP10 - CICP13 FUNCTIONAL_SNP rs6604675 chr1 222039285 Intergenic 2b 6161 CEU:1.0;0.85, YRI:1.0;0.96 FUNCTIONAL_SNP rs7550628 chr1 222039315 Intergenic 4 6131 CEU:1.0;0.85 FUNCTIONAL_SNP rs6604678 chr1 222051929 Intergenic 5b 6483 CEU:1.0;0.92, YRI:1.0;0.908 FUNCTIONAL_SNP rs10863664 chr1 222027190 Intergenic 6 18256 CEU:1.0;0.85 FUNCTIONAL_SNP rs12118052 chr1 222046282 Intergenic 6 836 CEU:1.0;0.961, YRI:1.0;0.96 FUNCTIONAL_SNP rs12130910 chr1 222038372 Intergenic 6 7074 CEU:1.0;0.85, YRI:1.0;0.96 FUNCTIONAL_SNP rs4384245 chr1 222041715 Intergenic 6 3731 CEU:1.0;0.846, YRI:1.0;0.96 FUNCTIONAL_SNP rs6699132 chr1 222037975 Intergenic 6 7471 CEU:1.0;0.85, YRI:1.0;0.96 FUNCTIONAL_SNP rs6604676 chr1 222042179 Intergenic 7 3267 CEU:1.0;0.85, YRI:1.0;0.96 FUNCTIONAL_SNP rs6604677 chr1 222042217 Intergenic 7 3229 CEU:1.0;0.848, YRI:1.0;0.96 FUNCTIONAL_SNP rs11118875 chr1 222039967 Intergenic 7 5479 CEU:1.0;0.85, YRI:1.0;0.96 FUNCTIONAL_SNP rs7544478 chr1 222039715 Intergenic 7 5731 CEU:1.0;0.816, YRI:1.0;0.96 FUNCTIONAL_SNP rs11579490 chr1 222050467 Intergenic 7 5021 CEU:1.0;0.924, YRI:1.0;0.96 LEAD_SNP rs6687758 chr1 222164948 Intergenic 6 ASSOCIATION 21685912 Progressive supranuclear palsy 7.22184874962 DUSP10 - CICP13 ASSOCIATION 20972440 Colorectal cancer 8.69897000434 DUSP10 - CICP13 FUNCTIONAL_SNP rs17442058 chr1 222180150 Intergenic 2b 15202 CEU:1.0;1.0 FUNCTIONAL_SNP rs11118926 chr1 222187123 Intergenic 5a 22175 CEU:1.0;1.0 FUNCTIONAL_SNP rs17011200 chr1 222191505 Intergenic 5b 26557 CEU:1.0;1.0 FUNCTIONAL_SNP rs12121134 chr1 222194880 Intergenic 5b 29932 CEU:1.0;1.0 FUNCTIONAL_SNP rs6695584 chr1 222161989 Intergenic 5b 2959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs12125383 chr1 222168434 Intergenic 5b 3486 CEU:1.0;1.0 FUNCTIONAL_SNP rs12135286 chr1 222218761 Intron 6 53813 CEU:1.0;1.0 FUNCTIONAL_SNP rs17011182 chr1 222164327 Intergenic 6 621 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs17495159 chr1 222189593 Intergenic 6 24645 CEU:1.0;1.0 FUNCTIONAL_SNP rs6691195 chr1 222162373 Intergenic 6 2575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs12125368 chr1 222198672 Intergenic 7 33724 CEU:1.0;1.0 FUNCTIONAL_SNP rs12739936 chr1 222183189 Intergenic 7 18241 CEU:1.0;1.0 FUNCTIONAL_SNP rs17442323 chr1 222192964 Intergenic 7 28016 CEU:1.0;1.0 LEAD_SNP rs873549 chr1 222271767 Intron 7 ASSOCIATION 20711176 Keloid 22.2218487496 DUSP10 - CICP13 FUNCTIONAL_SNP rs11118946 chr1 222269793 Intron 2b 1974 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11118947 chr1 222269805 Intron 2b 1962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs873548 chr1 222271940 Intron 4 173 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10863688 chr1 222266774 Intron 5a 4993 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs753962 chr1 222273064 Intron 5b 1297 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1348270 chr1 222270261 Intron 5b 1506 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6604701 chr1 222267500 Intron 6 4267 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7549980 chr1 222268498 Intron 6 3269 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1530313 chr1 222274010 Intron 6 2243 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.941 FUNCTIONAL_SNP rs7552392 chr1 222268691 Intron 7 3076 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2378519 chr1 222273868 Intron 7 2101 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs7534878 chr1 222274917 Intron 7 3150 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6678815 chr1 222277369 Intron 7 5602 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.888 FUNCTIONAL_SNP rs6703147 chr1 222268765 Intron 7 3002 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7517086 chr1 222271325 Intron 7 442 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7546082 chr1 222266101 Intron 7 5666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17465637 chr1 222823529 Intron 6 ASSOCIATION 21378990 Coronary heart disease 8.0 MIA3 ASSOCIATION 19198609 Myocardial infarction (early onset) 9.0 MIA3 ASSOCIATION 17634449 Coronary heart disease 6.0 MIA3 FUNCTIONAL_SNP rs2133189 chr1 222814442 Intron 7 9087 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.953, YRI:1.0;0.864 FUNCTIONAL_SNP rs17163358 chr1 222820639 Intron 7 2890 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.953, YRI:1.0;0.864 FUNCTIONAL_SNP rs17011681 chr1 222825088 Intron 7 1559 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2291832 chr1 222826481 Intron 7 2952 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.953, YRI:1.0;0.864 FUNCTIONAL_SNP rs2291834 chr1 222832295 Intron 7 8766 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs6683071 chr1 222923351 Coding 4 ASSOCIATION 19734545 Cognitive performance 5.39794000867 FAM177B FUNCTIONAL_SNP rs12073392 chr1 222926678 Intergenic 6 3327 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 LEAD_SNP rs11579964 chr1 224538940 Intron 7 ASSOCIATION 21042317 Major depressive disorder 5.39794000867 NVL - CNIH4 LEAD_SNP rs1390401 chr1 227797950 Intron 6 ASSOCIATION 18391952 Height 8.30102999566 ZNF678 FUNCTIONAL_SNP rs3942992 chr1 227772396 Intron 7 25554 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs801112 chr1 228996622 Intergenic 5a ASSOCIATION 20844546 Endometriosis 5.30102999566 RHOU - ISCA1P2 LEAD_SNP rs801114 chr1 228997835 Intergenic 5b ASSOCIATION 18849993 Basal cell carcinoma (cutaneous) 11.2218487496 RHOU - ISCA1P2 LEAD_SNP rs2144300 chr1 230294916 Intron 4 ASSOCIATION 18193043 HDL cholesterol 13.5228787453 GALNT2 ASSOCIATION 18193043 Triglycerides 6.09691001301 GALNT2 FUNCTIONAL_SNP rs4846913 chr1 230294715 Intron 4 201 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17315646 chr1 230295307 Intron 4 391 CEU:1.0;0.96, CHB:1.0;0.878, JPT:1.0;0.824, YRI:1.0;1.0 FUNCTIONAL_SNP rs4846914 chr1 230295691 Intron 5b 775 CEU:1.0;0.96, CHB:1.0;0.878, JPT:1.0;0.824, YRI:1.0;1.0 FUNCTIONAL_SNP rs10127775 chr1 230295789 Intron 5b 873 CEU:1.0;0.96, CHB:1.0;0.878, JPT:1.0;0.824, YRI:1.0;1.0 LEAD_SNP rs4846914 chr1 230295691 Intron 5b ASSOCIATION 19060906 HDL cholesterol 7.39794000867 GALNT2 ASSOCIATION 18193044 HDL cholesterol 12.6989700043 GALNT2 ASSOCIATION 18193044 Triglycerides 14.15490196 GALNT2 FUNCTIONAL_SNP rs4846913 chr1 230294715 Intron 4 976 CEU:1.0;1.0, CHB:1.0;0.878, JPT:1.0;0.824, YRI:1.0;1.0 FUNCTIONAL_SNP rs2144300 chr1 230294916 Intron 4 775 CEU:1.0;0.96, CHB:1.0;0.878, JPT:1.0;0.824, YRI:1.0;1.0 FUNCTIONAL_SNP rs17315646 chr1 230295307 Intron 4 384 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10127775 chr1 230295789 Intron 5b 98 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10489615 chr1 230304988 Intron 6 ASSOCIATION 20864672 HDL cholesterol 8.39794000867 GALNT2 FUNCTIONAL_SNP rs4846922 chr1 230307182 Intron 2b 2194 CEU:1.0;0.921 FUNCTIONAL_SNP rs4846913 chr1 230294715 Intron 4 10273 CEU:1.0;0.96, CHB:1.0;0.692, JPT:0.92;0.583 FUNCTIONAL_SNP rs2144300 chr1 230294916 Intron 4 10072 CEU:1.0;0.922, CHB:1.0;0.692, JPT:0.92;0.583 FUNCTIONAL_SNP rs17315646 chr1 230295307 Intron 4 9681 CEU:1.0;0.96, CHB:1.0;0.788, JPT:0.933;0.728 FUNCTIONAL_SNP rs4846914 chr1 230295691 Intron 5b 9297 CEU:1.0;0.96, CHB:1.0;0.788, JPT:0.933;0.728 FUNCTIONAL_SNP rs1321257 chr1 230305312 Intron 5b 324 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11122450 chr1 230301811 Intron 5b 3177 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2281719 chr1 230297659 Intron 5b 7329 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs10127775 chr1 230295789 Intron 5b 9199 CEU:1.0;0.96, CHB:1.0;0.788, JPT:0.933;0.728 FUNCTIONAL_SNP rs10779835 chr1 230299949 Intron 7 5039 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs701157 chr1 230674826 Intergenic 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.39794000867 PGBD5 - RPS24P4 LEAD_SNP rs12042938 chr1 231816842 Intron 6 ASSOCIATION 21483430 Neuranatomic and neurocognitive phenotypes 35.3979400087 DISC1 FUNCTIONAL_SNP rs4366301 chr1 231806286 Intron 6 10556 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1094653 chr1 231794794 Intron 6 22048 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.893 FUNCTIONAL_SNP rs10864693 chr1 231804093 Intron 7 12749 CEU:1.0;0.85, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs1417585 chr1 231803604 Intron 7 13238 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.893 LEAD_SNP rs12044355 chr1 231844347 Intron 7 ASSOCIATION 19118814 Alzheimer's disease 5.04575749056 DISC1 FUNCTIONAL_SNP rs6693517 chr1 231852444 Intron 5a 8097 CEU:1.0;0.951, CHB:1.0;0.898, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10429979 chr1 231843569 Intron 5b 778 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12043433 chr1 231843591 Intron 5b 756 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11122323 chr1 231848933 Intron 7 4586 CEU:1.0;0.953, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12045248 chr1 231850748 Intron 7 6401 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6696914 chr1 231853480 Intron 7 9133 CEU:1.0;0.953, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1954175 chr1 231855410 Intron 7 11063 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 LEAD_SNP rs2793086 chr1 231899704 Intron 7 ASSOCIATION 21659360 Response to antineoplastic agents 5.04575749056 DISC1 FUNCTIONAL_SNP rs1538976 chr1 231897629 Intron 4 2075 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1538977 chr1 231897303 Intron 5b 2401 CEU:1.0;0.883, YRI:1.0;0.61 FUNCTIONAL_SNP rs1538978 chr1 231896915 Intron 7 2789 CEU:1.0;0.936, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs16856202 chr1 232155151 Intron 7 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 5.09691001301 DISC1 LEAD_SNP rs10746514 chr1 232246027 Intergenic 5b ASSOCIATION 20339536 Response to statin therapy 6.0 DISC2 - SIPA1L2 FUNCTIONAL_SNP rs1888601 chr1 232266922 Intergenic 3a 20895 CEU:1.0;0.817, CHB:1.0;0.579, JPT:1.0;0.823 FUNCTIONAL_SNP rs867844 chr1 232266278 Intergenic 5b 20251 CEU:1.0;0.817, CHB:1.0;0.577, JPT:1.0;0.823 FUNCTIONAL_SNP rs1576618 chr1 232244331 Intergenic 6 1696 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.935;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs10864720 chr1 232271232 Intergenic 6 25205 CEU:1.0;0.817, CHB:1.0;0.579, JPT:1.0;0.823 FUNCTIONAL_SNP rs12039526 chr1 232272599 Intergenic 7 26572 CEU:1.0;0.812, CHB:0.904;0.508, JPT:1.0;0.82 LEAD_SNP rs669408 chr1 232519150 Intergenic 3a ASSOCIATION 20694011 Immunoglobulin A 6.0 DISC2 - SIPA1L2 LEAD_SNP rs12027542 chr1 233340154 Intron 7 ASSOCIATION 21490949 Type 2 diabetes 6.39794000867 PCNXL2 FUNCTIONAL_SNP rs16858825 chr1 233325832 Intron 6 14322 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10910200 chr1 233643856 Intergenic 6 ASSOCIATION 21441570 Diabetic retinopathy 5.22184874962 KIAA1804 - KCNK1 FUNCTIONAL_SNP rs1557129 chr1 233643110 Intergenic 5b 746 CEU:1.0;0.904 LEAD_SNP rs10489896 chr1 234583618 Intron 6 ASSOCIATION 17903297 Cognitive test performance 5.22184874962 TARBP1 FUNCTIONAL_SNP rs2102596 chr1 234584231 Coding 7 613 CEU:0.942;0.887, CHB:1.0;1.0, JPT:1.0;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs6586387 chr1 234585541 Intron 6 1923 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.945 FUNCTIONAL_SNP rs4920243 chr1 234579368 Intron 6 4250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs3768286 chr1 234581891 Intron 6 1727 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs10489895 chr1 234581403 Intron 7 2215 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs4920242 chr1 234579091 Intron 7 4527 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.951 LEAD_SNP rs744487 chr1 234726012 Intergenic 7 ASSOCIATION 21347282 Coronary heart disease 5.30102999566 TARBP1 - IRF2BP2 FUNCTIONAL_SNP rs11581667 chr1 234726356 Intergenic 5b 344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.838 LEAD_SNP rs2069084 chr1 234984988 Intergenic 3a ASSOCIATION 20041166 HIV-1 control 5.22184874962 PP2672 - TOMM20 FUNCTIONAL_SNP rs2673947 chr1 234981742 Intergenic 3a 3246 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7536491 chr1 234991851 Intergenic 3a 6863 CEU:0.912;0.831 FUNCTIONAL_SNP rs2796163 chr1 234978669 Intergenic 4 6319 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2786023 chr1 234981565 Intergenic 5a 3423 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs966121 chr1 234982074 Intergenic 5a 2914 CEU:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs2796162 chr1 234976072 Intergenic 5b 8916 CEU:1.0;0.828 FUNCTIONAL_SNP rs2673945 chr1 234987706 Intergenic 5b 2718 CEU:1.0;0.906, YRI:1.0;0.913 FUNCTIONAL_SNP rs10495354 chr1 234990732 Intergenic 5b 5744 CEU:1.0;1.0, YRI:0.871;0.504 FUNCTIONAL_SNP rs2796160 chr1 234966277 Intergenic 6 18711 CEU:1.0;0.828, YRI:1.0;0.872 FUNCTIONAL_SNP rs822828 chr1 234962633 Intergenic 6 22355 CEU:1.0;0.913, YRI:1.0;0.804 FUNCTIONAL_SNP rs822842 chr1 234973323 Intergenic 6 11665 CEU:1.0;0.828, YRI:1.0;0.914 FUNCTIONAL_SNP rs2802975 chr1 234989370 Intergenic 6 4382 CEU:1.0;0.906, YRI:1.0;0.835 FUNCTIONAL_SNP rs2796161 chr1 234967951 Intergenic 7 17037 CEU:1.0;0.906, YRI:1.0;0.766 FUNCTIONAL_SNP rs2796166 chr1 234984583 Intergenic 7 405 CEU:1.0;0.913, YRI:1.0;1.0 FUNCTIONAL_SNP rs2488212 chr1 234974278 Intergenic 7 10710 CEU:1.0;0.828, YRI:1.0;0.956 FUNCTIONAL_SNP rs2673943 chr1 234988968 Intergenic 7 3980 CEU:1.0;0.913, YRI:1.0;0.956 FUNCTIONAL_SNP rs2802980 chr1 234976380 Intergenic 7 8608 CEU:1.0;0.912 FUNCTIONAL_SNP rs2802982 chr1 234966544 Intergenic 7 18444 CEU:1.0;0.828, YRI:0.953;0.908 FUNCTIONAL_SNP rs822829 chr1 234962529 Intergenic 7 22459 CEU:1.0;0.913 FUNCTIONAL_SNP rs822841 chr1 234972552 Intergenic 7 12436 CEU:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs2673979 chr1 234965012 Intergenic 7 19976 CEU:1.0;0.913, YRI:1.0;0.804 FUNCTIONAL_SNP rs883278 chr1 234990504 Intergenic 7 5516 CEU:1.0;0.906, YRI:0.9;0.81 FUNCTIONAL_SNP rs2674007 chr1 234968658 Intergenic 7 16330 CEU:1.0;0.913, YRI:1.0;0.875 LEAD_SNP rs6429082 chr1 235600129 Intron 6 ASSOCIATION 19557161 Adiposity 6.52287874528 TBCE FUNCTIONAL_SNP rs1305557 chr1 235627837 Exon,non-coding 5b 27708 CEU:1.0;0.962, CHB:0.94;0.884, JPT:1.0;1.0 FUNCTIONAL_SNP rs4659520 chr1 235575321 Intron 2b 24808 CEU:1.0;0.855, CHB:1.0;0.891, JPT:1.0;0.747 FUNCTIONAL_SNP rs6675944 chr1 235572669 Intron 4 27460 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs291391 chr1 235649955 Intron 5a 49826 CEU:1.0;0.817, CHB:1.0;0.885, JPT:1.0;0.867 FUNCTIONAL_SNP rs704708 chr1 235620134 Intron 6 20005 CEU:1.0;0.962, CHB:0.94;0.884, JPT:1.0;1.0 FUNCTIONAL_SNP rs704710 chr1 235621026 Intron 6 20897 CEU:1.0;0.962, CHB:0.937;0.826, JPT:1.0;1.0 FUNCTIONAL_SNP rs12405889 chr1 235597252 Intron 6 2877 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.536 FUNCTIONAL_SNP rs2291688 chr1 235594250 Intron 6 5879 CEU:1.0;0.889, CHB:1.0;0.891, JPT:1.0;0.953, YRI:1.0;0.557 FUNCTIONAL_SNP rs704709 chr1 235620964 Intron 7 20835 CEU:1.0;0.962, CHB:0.94;0.884, JPT:1.0;1.0 FUNCTIONAL_SNP rs2055127 chr1 235598973 Intron 7 1156 CEU:1.0;0.961, CHB:1.0;0.942, JPT:1.0;0.953, YRI:1.0;0.544 FUNCTIONAL_SNP rs834143 chr1 235626406 Intron 7 26277 CEU:1.0;0.961, CHB:0.94;0.883, JPT:1.0;1.0 LEAD_SNP rs291353 chr1 235720898 Intron 4 ASSOCIATION 17903295 Aging traits 5.22184874962 GNG4 LEAD_SNP rs3768080 chr1 236179869 Intron 7 ASSOCIATION 21478494 Cutaneous nevi 7.15490195999 NID1 FUNCTIONAL_SNP rs2031487 chr1 236175339 Coding 5b 4530 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.92 FUNCTIONAL_SNP rs10803214 chr1 236165216 Intron 4 14653 CEU:0.958;0.882, CHB:1.0;0.811, JPT:1.0;0.842, YRI:1.0;0.925 FUNCTIONAL_SNP rs10754833 chr1 236184931 Intron 4 5062 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.935;0.823, YRI:1.0;0.92 FUNCTIONAL_SNP rs10737895 chr1 236185068 Intron 4 5199 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.935;0.823, YRI:1.0;0.92 FUNCTIONAL_SNP rs10803226 chr1 236184355 Intron 5b 4486 CEU:1.0;0.918, CHB:1.0;1.0, JPT:0.935;0.823, YRI:1.0;0.92 FUNCTIONAL_SNP rs4660144 chr1 236163904 Intron 5b 15965 CEU:0.917;0.807, CHB:1.0;0.74, JPT:0.938;0.746 FUNCTIONAL_SNP rs10927275 chr1 236184642 Intron 6 4773 CEU:1.0;0.958 FUNCTIONAL_SNP rs4660147 chr1 236197412 Intron 6 17543 CEU:1.0;0.88, CHB:1.0;0.91 FUNCTIONAL_SNP rs9662380 chr1 236178606 Intron 7 1263 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9726926 chr1 236166591 Intron 7 13278 CEU:1.0;0.958, CHB:0.888;0.65, JPT:1.0;0.884, YRI:0.907;0.506 FUNCTIONAL_SNP rs3754237 chr1 236177182 Intron 7 2687 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942, YRI:1.0;1.0 LEAD_SNP rs7520258 chr1 236313127 Intron 5b ASSOCIATION 21107309 Working memory 6.30102999566 GPR137B LEAD_SNP rs7554607 chr1 237266603 Intron 5a ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 5.69897000434 RYR2 FUNCTIONAL_SNP rs7511682 chr1 237266263 Intron 7 340 CEU:1.0;0.882 LEAD_SNP rs2819770 chr1 237911004 Intron 6 ASSOCIATION 17903301 Exercise treadmill test traits 5.39794000867 RYR2 FUNCTIONAL_SNP rs10925500 chr1 237892645 Intron 5a 18359 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2685298 chr1 237907184 Intron 5b 3820 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2819742 chr1 237990122 Intron 6 ASSOCIATION 21386754 Response to cerivastatin 6.69897000434 RYR2 FUNCTIONAL_SNP rs790888 chr1 237978001 Intron 7 12121 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.819;0.67 FUNCTIONAL_SNP rs2794835 chr1 237981677 Intron 7 8445 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 LEAD_SNP rs2499604 chr1 238103501 Intron 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (AST) 5.69897000434 ZP4 - TRNAP23P FUNCTIONAL_SNP rs2451620 chr1 238102080 Intron 4 1421 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs2499606 chr1 238102779 Intron 6 722 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.616 FUNCTIONAL_SNP rs2499601 chr1 238104895 Intron 7 1394 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2451615 chr1 238104241 Intron 7 740 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2820037 chr1 239436542 Intron 7 ASSOCIATION 17554300 Hypertension 6.09691001301 RPL39P10 - CHRM3 FUNCTIONAL_SNP rs2820038 chr1 239436607 Intron 5a 65 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2820040 chr1 239436876 Intron 5a 334 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2820041 chr1 239437737 Intron 5b 1195 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2820042 chr1 239437829 Intron 5b 1287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2790670 chr1 239442090 Intron 7 5548 CEU:1.0;0.889, CHB:1.0;0.846, JPT:1.0;1.0, YRI:1.0;0.908 FUNCTIONAL_SNP rs2493999 chr1 239440091 Intron 7 3549 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2820044 chr1 239438375 Intron 7 1833 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2820046 chr1 239439310 Intron 7 2768 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1339730 chr1 239438693 Intron 7 2151 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9428827 chr1 239437200 Intron 7 658 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6677208 chr1 239601969 Intron 7 ASSOCIATION 21507922 Platelet counts 5.52287874528 RPL39P10 - CHRM3 LEAD_SNP rs17672135 chr1 240445596 Intron 5b ASSOCIATION 17554300 Coronary heart disease 5.69897000434 FMN2 FUNCTIONAL_SNP rs1456648 chr1 240445712 Intron 7 116 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12569163 chr1 241878547 Intron 6 ASSOCIATION 20923822 Radiation response 5.69897000434 WDR64 LEAD_SNP rs4132509 chr1 243943084 Intron 7 ASSOCIATION 20031603 RR interval (heart rate) 5.69897000434 AKT3 FUNCTIONAL_SNP rs6675851 chr1 243787494 Intron 4 155590 CEU:1.0;1.0, CHB:1.0;0.739, JPT:1.0;0.873 FUNCTIONAL_SNP rs7534117 chr1 243964902 Intron 4 21818 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs10927059 chr1 243852079 Intron 5b 91005 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.871;0.699 FUNCTIONAL_SNP rs7519673 chr1 243993123 Intron 5b 50039 CEU:1.0;0.828, CHB:1.0;0.946, JPT:0.923;0.744 FUNCTIONAL_SNP rs2290754 chr1 243806268 Intron 5b 136816 CEU:1.0;1.0, CHB:1.0;0.739, JPT:1.0;0.873, YRI:0.83;0.662 FUNCTIONAL_SNP rs10927047 chr1 243803677 Intron 5b 139407 CEU:1.0;0.913, CHB:1.0;0.739, JPT:1.0;0.696 FUNCTIONAL_SNP rs10803161 chr1 243990770 Intron 5b 47686 CEU:1.0;1.0, CHB:1.0;0.796, JPT:1.0;0.934, YRI:1.0;0.842 FUNCTIONAL_SNP rs12032342 chr1 243834360 Intron 6 108724 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.812 FUNCTIONAL_SNP rs10927065 chr1 243914611 Intron 6 28473 CEU:1.0;0.828, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs10927051 chr1 243805936 Intron 6 137148 CEU:1.0;1.0 FUNCTIONAL_SNP rs320320 chr1 243835186 Intron 6 107898 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs320339 chr1 243870910 Intron 6 72174 CEU:1.0;0.827, CHB:0.939;0.79, JPT:1.0;1.0 FUNCTIONAL_SNP rs7517921 chr1 243856420 Intron 6 86664 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.871;0.699 FUNCTIONAL_SNP rs10927076 chr1 243958293 Intron 6 15209 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.812 FUNCTIONAL_SNP rs9287269 chr1 243954551 Intron 6 11467 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1458023 chr1 243886673 Intron 6 56411 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.529 FUNCTIONAL_SNP rs12124113 chr1 243904366 Intron 7 38718 CEU:1.0;0.828, CHB:1.0;0.849, JPT:1.0;1.0, YRI:1.0;0.574 FUNCTIONAL_SNP rs12021907 chr1 243995640 Intron 7 52556 CEU:1.0;0.828, CHB:1.0;0.844, JPT:1.0;0.812 FUNCTIONAL_SNP rs12034588 chr1 243784392 Intron 7 158692 CEU:1.0;1.0, CHB:1.0;0.709, JPT:1.0;0.683 FUNCTIONAL_SNP rs2881275 chr1 243918313 Intron 7 24771 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs9782958 chr1 243892972 Intron 7 50112 CEU:1.0;0.918, CHB:1.0;0.849, JPT:1.0;1.0, YRI:0.951;0.612 FUNCTIONAL_SNP rs12048930 chr1 243940076 Intron 7 3008 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.843 FUNCTIONAL_SNP rs2125230 chr1 243885848 Intron 7 57236 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.791;0.626 FUNCTIONAL_SNP rs320305 chr1 243859909 Intron 7 83175 CEU:1.0;0.828, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10927046 chr1 243801190 Intron 7 141894 CEU:1.0;0.913, CHB:1.0;0.739, JPT:1.0;0.696 FUNCTIONAL_SNP rs12049228 chr1 243995271 Intron 7 52187 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs10803152 chr1 243846167 Intron 7 96917 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4553169 chr1 243900640 Intron 7 42444 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10803158 chr1 243923229 Intron 7 19855 CEU:1.0;1.0, CHB:0.94;0.791, JPT:1.0;1.0 FUNCTIONAL_SNP rs12037013 chr1 243784207 Intron 7 158877 CEU:1.0;0.913, CHB:1.0;0.739, JPT:1.0;0.696 FUNCTIONAL_SNP rs10927067 chr1 243923244 Intron 7 19840 CEU:1.0;1.0, CHB:0.94;0.791, JPT:1.0;1.0 FUNCTIONAL_SNP rs1458024 chr1 243937445 Intron 7 5639 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9782883 chr1 243892532 Intron 7 50552 CEU:1.0;1.0, CHB:1.0;0.849, JPT:1.0;1.0, YRI:0.949;0.565 FUNCTIONAL_SNP rs6671475 chr1 243789342 Intron 7 153742 CEU:1.0;0.918, CHB:1.0;0.739, JPT:1.0;0.873, YRI:0.871;0.699 FUNCTIONAL_SNP rs10754807 chr1 243804158 Intron 7 138926 CEU:1.0;1.0, CHB:1.0;0.739, JPT:1.0;0.873 FUNCTIONAL_SNP rs6429433 chr1 243857994 Intron 7 85090 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.791;0.626 FUNCTIONAL_SNP rs12031994 chr1 243917309 Intron 7 25775 CEU:1.0;0.828, CHB:1.0;1.0, JPT:1.0;0.812 LEAD_SNP rs10927101 chr1 244173872 Intron 5b ASSOCIATION 21441570 Diabetic retinopathy 5.69897000434 AKT3 - ZNF238 FUNCTIONAL_SNP rs11580734 chr1 244173339 Exon,non-coding 7 533 CEU:0.954;0.909, YRI:1.0;0.743 FUNCTIONAL_SNP rs523878 chr1 244163092 Intron 7 10780 CEU:1.0;0.84, YRI:0.795;0.546 FUNCTIONAL_SNP rs536441 chr1 244160904 Intron 7 12968 CEU:1.0;0.84 LEAD_SNP rs476141 chr1 244176424 Intron 7 ASSOCIATION 21441570 Diabetic retinopathy 7.0 AKT3 - ZNF238 FUNCTIONAL_SNP rs1711347 chr1 244161982 Intron 4 14442 CEU:1.0;0.885, JPT:0.938;0.709 FUNCTIONAL_SNP rs512825 chr1 244170194 Intron 7 6230 CEU:1.0;0.96, JPT:0.936;0.671, YRI:0.786;0.577 LEAD_SNP rs10924270 chr1 245804664 Intron 6 ASSOCIATION 20595579 Longevity 9.52287874528 KIF26B LEAD_SNP rs3738443 chr1 247348189 Intergenic 6 ASSOCIATION 21314694 Alcohol dependence 5.39794000867 ZNF124 - VN1R17P FUNCTIONAL_SNP rs4582838 chr1 247373571 Intergenic 4 25382 CEU:1.0;0.939 FUNCTIONAL_SNP rs4351686 chr1 247353330 Intergenic 5a 5141 CEU:1.0;0.855, CHB:1.0;0.939, JPT:0.926;0.857 FUNCTIONAL_SNP rs2892054 chr1 247367105 Intergenic 5b 18916 CEU:0.943;0.8, CHB:1.0;0.945, JPT:1.0;0.868 FUNCTIONAL_SNP rs7546908 chr1 247363833 Intergenic 5b 15644 CEU:0.943;0.8, CHB:1.0;0.945, JPT:1.0;0.93 FUNCTIONAL_SNP rs10924968 chr1 247400259 Intron 5b 52070 CEU:1.0;0.894 FUNCTIONAL_SNP rs6660351 chr1 247347828 Intergenic 5b 361 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;0.927 FUNCTIONAL_SNP rs1115202 chr1 247353180 Intergenic 6 4991 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs12569042 chr1 247366380 Intergenic 6 18191 CEU:0.943;0.8, CHB:1.0;0.945, JPT:1.0;0.868 FUNCTIONAL_SNP rs6684181 chr1 247347971 Intergenic 7 218 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs4551629 chr1 247375050 Intron 7 26861 CEU:0.938;0.828, CHB:0.906;0.521, JPT:1.0;0.619 FUNCTIONAL_SNP rs12562191 chr1 247397529 Intron 7 49340 CEU:1.0;0.894, JPT:1.0;0.657 FUNCTIONAL_SNP rs6668154 chr1 247351283 Intergenic 7 3094 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;0.93 LEAD_SNP rs1539019 chr1 247600301 Intron 6 ASSOCIATION 20031576 Fibrinogen 8.0 NLRP3 FUNCTIONAL_SNP rs10925025 chr1 247601160 Intron 3a 859 CEU:0.954;0.835, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.509 FUNCTIONAL_SNP rs10925026 chr1 247604258 Intron 6 3957 CEU:0.954;0.835, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.894;0.634 LEAD_SNP rs12239046 chr1 247601595 Intron 3a ASSOCIATION 21300955 C-reactive protein 15.0 NLRP3 FUNCTIONAL_SNP rs10925025 chr1 247601160 Intron 3a 435 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10925026 chr1 247604258 Intron 6 2663 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4925546 chr1 247602968 Intron 6 1373 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.717 FUNCTIONAL_SNP rs10157379 chr1 247605599 Intron 7 4004 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.68 LEAD_SNP rs1881797 chr1 247689532 Intron 6 ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 5.15490195999 OR2W5 - OR2C3 FUNCTIONAL_SNP rs7527856 chr1 247688139 Exon,non-coding 7 1393 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1881794 chr1 247682920 Intron 5b 6612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7550918 chr1 247675559 Intron 6 13973 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;0.789, YRI:1.0;0.909 FUNCTIONAL_SNP rs4551631 chr1 247667663 Intergenic 7 21869 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2387038 chr1 247674919 Intron 7 14613 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs11204538 chr1 248046272 Intron 6 ASSOCIATION 20139978 Hematological and biochemical traits 7.69897000434 TRIM58 - OR2W3 LEAD_SNP rs4481887 chr1 248496863 Intergenic 7 ASSOCIATION 20585627 Common traits (Other) 23.15490196 OR2M7 - OR14C36 FUNCTIONAL_SNP rs10888338 chr1 248436611 Coding 7 60252 CEU:1.0;0.946, CHB:1.0;0.778, JPT:1.0;1.0 FUNCTIONAL_SNP rs7555310 chr1 248487638 Coding 6 9225 CEU:1.0;0.91, CHB:1.0;0.904, JPT:1.0;1.0 FUNCTIONAL_SNP rs4916130 chr1 248487338 Coding 7 9525 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4244184 chr1 248486895 Exon,non-coding 7 9968 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs4244185 chr1 248486913 Exon,non-coding 7 9950 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10888352 chr1 248451965 Intergenic 3a 44898 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6587450 chr1 248480496 Intergenic 5a 16367 CEU:1.0;0.909, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs4427440 chr1 248480337 Intergenic 5a 16526 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs4593862 chr1 248480176 Intergenic 5a 16687 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.763 FUNCTIONAL_SNP rs4508046 chr1 248488988 Intergenic 5a 7875 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4244179 chr1 248470984 Intergenic 5b 25879 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.845;0.619 FUNCTIONAL_SNP rs4244180 chr1 248471033 Intergenic 5b 25830 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs6587444 chr1 248438452 Intergenic 6 58411 CEU:1.0;0.91, CHB:1.0;0.824, JPT:1.0;1.0, YRI:1.0;0.728 FUNCTIONAL_SNP rs7534188 chr1 248434303 Intergenic 6 62560 CEU:1.0;0.869, CHB:1.0;0.824, JPT:1.0;1.0 FUNCTIONAL_SNP rs7517319 chr1 248466408 Intergenic 6 30455 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4534422 chr1 248479482 Intergenic 6 17381 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs4534423 chr1 248474993 Intergenic 6 21870 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10888344 chr1 248446655 Intergenic 6 50208 CEU:1.0;0.909, CHB:1.0;0.796, JPT:1.0;1.0 FUNCTIONAL_SNP rs10888348 chr1 248448610 Intergenic 6 48253 CEU:0.948;0.816, CHB:1.0;0.822, JPT:1.0;1.0 FUNCTIONAL_SNP rs10888349 chr1 248448625 Intergenic 6 48238 CEU:1.0;0.91, CHB:1.0;0.824, JPT:1.0;1.0 FUNCTIONAL_SNP rs10888351 chr1 248451608 Intergenic 6 45255 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.61 FUNCTIONAL_SNP rs4244178 chr1 248468441 Intergenic 6 28422 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.863;0.656 FUNCTIONAL_SNP rs4244181 chr1 248471118 Intergenic 6 25745 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs4244186 chr1 248493319 Intergenic 6 3544 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs4564179 chr1 248472422 Intergenic 6 24441 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4336885 chr1 248473168 Intergenic 6 23695 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs6681339 chr1 248482761 Intergenic 6 14102 CEU:1.0;0.903, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4453080 chr1 248474671 Intergenic 6 22192 CEU:1.0;0.9, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6671702 chr1 248482851 Intergenic 6 14012 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4341391 chr1 248475720 Intergenic 6 21143 CEU:1.0;0.897, CHB:1.0;0.888, JPT:1.0;0.91, YRI:0.755;0.507 FUNCTIONAL_SNP rs7524700 chr1 248472816 Intergenic 6 24047 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs4409694 chr1 248485498 Intergenic 6 11365 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4497248 chr1 248450525 Intergenic 6 46338 CEU:1.0;0.909, CHB:1.0;0.824, JPT:1.0;1.0, YRI:1.0;0.664 FUNCTIONAL_SNP rs9660769 chr1 248484558 Intergenic 6 12305 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.763 FUNCTIONAL_SNP rs4423045 chr1 248479495 Intergenic 6 17368 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4575112 chr1 248473534 Intergenic 6 23329 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4578248 chr1 248434069 Intergenic 6 62794 CEU:1.0;0.869, CHB:1.0;0.824, JPT:1.0;1.0 FUNCTIONAL_SNP rs4472779 chr1 248474603 Intergenic 6 22260 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5009868 chr1 248474495 Intergenic 6 22368 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs10788769 chr1 248457426 Intergenic 6 39437 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6669290 chr1 248476804 Intergenic 6 20059 CEU:1.0;0.909, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10788775 chr1 248471945 Intergenic 6 24918 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10788770 chr1 248457474 Intergenic 6 39389 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.902, YRI:0.724;0.524 FUNCTIONAL_SNP rs4517383 chr1 248426484 Intergenic 7 70379 CEU:1.0;0.869, CHB:1.0;0.824, JPT:1.0;1.0 FUNCTIONAL_SNP rs4309013 chr1 248480768 Intergenic 7 16095 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs4586010 chr1 248437568 Intergenic 7 59295 CEU:1.0;0.91, CHB:1.0;0.824, JPT:1.0;1.0 FUNCTIONAL_SNP rs11204636 chr1 248492409 Intergenic 7 4454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4430369 chr1 248464330 Intergenic 7 32533 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.866 FUNCTIONAL_SNP rs4381224 chr1 248456826 Intergenic 7 40037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.754;0.507 FUNCTIONAL_SNP rs6587445 chr1 248440915 Intergenic 7 55948 CEU:1.0;0.91, CHB:1.0;0.824, JPT:1.0;1.0 FUNCTIONAL_SNP rs1339990 chr1 248509495 Intergenic 7 12632 CEU:1.0;0.953, CHB:0.895;0.8, JPT:1.0;0.778 FUNCTIONAL_SNP rs1339992 chr1 248509182 Intergenic 7 12319 CEU:1.0;0.953, CHB:0.895;0.8, JPT:1.0;0.778 FUNCTIONAL_SNP rs10158180 chr1 248481423 Intergenic 7 15440 CEU:1.0;0.909, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.783 FUNCTIONAL_SNP rs4307598 chr1 248474544 Intergenic 7 22319 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs4460676 chr1 248431781 Intergenic 7 65082 CEU:1.0;0.851, CHB:1.0;0.822, JPT:1.0;1.0 FUNCTIONAL_SNP rs10888358 chr1 248471467 Intergenic 7 25396 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs6663817 chr1 248495613 Intergenic 7 1250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.81, YRI:0.845;0.618 FUNCTIONAL_SNP rs10888337 chr1 248428227 Intergenic 7 68636 CEU:1.0;0.831, CHB:1.0;0.824, JPT:1.0;1.0 FUNCTIONAL_SNP rs10888340 chr1 248440381 Intergenic 7 56482 CEU:1.0;0.901, CHB:0.87;0.672, JPT:1.0;1.0, YRI:1.0;0.781 FUNCTIONAL_SNP rs10888347 chr1 248448566 Intergenic 7 48297 CEU:1.0;0.902, CHB:1.0;0.811, JPT:1.0;1.0, YRI:1.0;0.705 FUNCTIONAL_SNP rs10888356 chr1 248465044 Intergenic 7 31819 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10888362 chr1 248483975 Intergenic 7 12888 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4559544 chr1 248412507 Intergenic 7 84356 CEU:1.0;0.906, JPT:1.0;0.91 FUNCTIONAL_SNP rs6686911 chr1 248476969 Intergenic 7 19894 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4376768 chr1 248476088 Intergenic 7 20775 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10157089 chr1 248488157 Intergenic 7 8706 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4244172 chr1 248466838 Intergenic 7 30025 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10749646 chr1 248429719 Intergenic 7 67144 CEU:1.0;0.869, CHB:1.0;0.796, JPT:1.0;1.0 FUNCTIONAL_SNP rs4244182 chr1 248471174 Intergenic 7 25689 CEU:1.0;0.942, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.791 FUNCTIONAL_SNP rs4453079 chr1 248468839 Intergenic 7 28024 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4244187 chr1 248493511 Intergenic 7 3352 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs4295906 chr1 248429861 Intergenic 7 67002 CEU:1.0;0.869, CHB:0.892;0.72, JPT:1.0;0.842 FUNCTIONAL_SNP rs7545751 chr1 248478094 Intergenic 7 18769 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.839, YRI:1.0;1.0 FUNCTIONAL_SNP rs4306162 chr1 248468509 Intergenic 7 28354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12039929 chr1 248482018 Intergenic 7 14845 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.784 FUNCTIONAL_SNP rs10749653 chr1 248481384 Intergenic 7 15479 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12744455 chr1 248479960 Intergenic 7 16903 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4244183 chr1 248471222 Intergenic 7 25641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4390208 chr1 248472211 Intergenic 7 24652 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7412034 chr1 248434150 Intergenic 7 62713 CEU:1.0;0.823, CHB:1.0;0.824, JPT:1.0;1.0 FUNCTIONAL_SNP rs4372295 chr1 248464871 Intergenic 7 31992 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6681423 chr1 248482834 Intergenic 7 14029 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4486480 chr1 248449714 Intergenic 7 47149 CEU:1.0;0.91, CHB:1.0;0.796, JPT:1.0;1.0, YRI:1.0;0.879 FUNCTIONAL_SNP rs10158431 chr1 248481253 Intergenic 7 15610 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4360553 chr1 248467092 Intergenic 7 29771 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12042602 chr1 248482053 Intergenic 7 14810 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs4489592 chr1 248470697 Intergenic 7 26166 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs6697863 chr1 248495588 Intergenic 7 1275 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.792, YRI:1.0;1.0 FUNCTIONAL_SNP rs7527822 chr1 248467301 Intergenic 7 29562 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7521689 chr1 248435831 Intergenic 7 61032 CEU:1.0;0.869, CHB:1.0;0.824, JPT:1.0;1.0, YRI:0.757;0.573 FUNCTIONAL_SNP rs4916121 chr1 248432003 Intergenic 7 64860 CEU:0.947;0.851, CHB:1.0;0.824, JPT:1.0;1.0, YRI:0.757;0.573 FUNCTIONAL_SNP rs10788765 chr1 248445642 Intergenic 7 51221 CEU:1.0;0.91, CHB:1.0;0.824, JPT:1.0;1.0 FUNCTIONAL_SNP rs10788776 chr1 248479177 Intergenic 7 17686 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6689193 chr1 248482900 Intergenic 7 13963 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.784 FUNCTIONAL_SNP rs10788779 chr1 248481661 Intergenic 7 15202 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4512685 chr1 248446246 Intergenic 7 50617 CEU:1.0;0.903, CHB:1.0;0.754, JPT:1.0;1.0 FUNCTIONAL_SNP rs7513161 chr1 248453422 Intergenic 7 43441 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10127803 chr1 248476196 Intergenic 7 20667 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6666690 chr1 248465323 Intergenic 7 31540 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4579792 chr1 248463742 Intergenic 7 33121 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.665 FUNCTIONAL_SNP rs10888360 chr1 248479282 Intergenic 7 17581 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7525344 chr1 248467565 Intergenic 7 29298 CEU:0.949;0.901, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.728 FUNCTIONAL_SNP rs10736379 chr1 248455876 Intergenic 7 40987 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4282853 chr1 248475127 Intergenic 7 21736 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs9651175 chr1 248446888 Intergenic 7 49975 CEU:1.0;0.91, CHB:1.0;0.824, JPT:1.0;1.0 FUNCTIONAL_SNP rs10788778 chr1 248481551 Intergenic 7 15312 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs4554750 chr1 248496530 Intergenic 7 333 CEU:1.0;0.944, CHB:1.0;0.904, JPT:1.0;0.896, YRI:1.0;1.0 LEAD_SNP rs11542478 chr2 38938 Exon,non-coding 7 ASSOCIATION 21130836 Information processing speed 5.04575749056 FAM110C LEAD_SNP rs300774 chr2 112496 Intergenic 6 ASSOCIATION 21423239 Suicide attempts in bipolar disorder 7.30102999566 FAM110C - SH3YL1 FUNCTIONAL_SNP rs405258 chr2 145646 Intergenic 3a 33150 CEU:1.0;0.851, CHB:1.0;0.794, JPT:1.0;0.755 FUNCTIONAL_SNP rs437409 chr2 142137 Intergenic 4 29641 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.673 FUNCTIONAL_SNP rs300797 chr2 107140 Intergenic 5a 5356 CEU:1.0;0.918, CHB:1.0;0.888, JPT:1.0;0.673 FUNCTIONAL_SNP rs365967 chr2 123233 Intergenic 5b 10737 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.927;0.859 FUNCTIONAL_SNP rs300708 chr2 140449 Intergenic 5b 27953 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.673 FUNCTIONAL_SNP rs300707 chr2 141324 Intergenic 6 28828 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.673 FUNCTIONAL_SNP rs300709 chr2 139743 Intergenic 6 27247 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.673 FUNCTIONAL_SNP rs300715 chr2 137962 Intergenic 6 25466 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.673 FUNCTIONAL_SNP rs300717 chr2 136638 Intergenic 6 24142 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300722 chr2 134249 Intergenic 6 21753 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.673 FUNCTIONAL_SNP rs300723 chr2 134131 Intergenic 6 21635 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300726 chr2 132490 Intergenic 6 19994 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300727 chr2 132469 Intergenic 6 19973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300729 chr2 131788 Intergenic 6 19292 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs375613 chr2 130618 Intergenic 6 18122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs436446 chr2 106409 Intergenic 6 6087 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6732024 chr2 148410 Intergenic 6 35914 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs408074 chr2 150853 Intergenic 7 38357 CEU:1.0;0.846, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300692 chr2 181415 Intergenic 7 68919 CEU:1.0;0.923, CHB:0.895;0.8, JPT:1.0;1.0 FUNCTIONAL_SNP rs393008 chr2 125639 Intergenic 7 13143 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.927;0.859 FUNCTIONAL_SNP rs300710 chr2 139574 Intergenic 7 27078 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300712 chr2 138903 Intergenic 7 26407 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300719 chr2 136203 Intergenic 7 23707 CEU:1.0;0.878, CHB:1.0;1.0, JPT:1.0;0.756 FUNCTIONAL_SNP rs300720 chr2 134472 Intergenic 7 21976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300721 chr2 134436 Intergenic 7 21940 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;0.756 FUNCTIONAL_SNP rs300728 chr2 131828 Intergenic 7 19332 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.673 FUNCTIONAL_SNP rs300732 chr2 166725 Intergenic 7 54229 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300734 chr2 167167 Intergenic 7 54671 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300735 chr2 167739 Intergenic 7 55243 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300737 chr2 170576 Intergenic 7 58080 CEU:1.0;0.922, CHB:1.0;0.797, JPT:1.0;0.846 FUNCTIONAL_SNP rs300739 chr2 161605 Intergenic 7 49109 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs400978 chr2 119437 Intergenic 7 6941 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7562639 chr2 117690 Intergenic 7 5194 CEU:1.0;1.0, CHB:1.0;0.595, JPT:1.0;0.545, YRI:1.0;0.55 FUNCTIONAL_SNP rs409572 chr2 153302 Intergenic 7 40806 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs300773 chr2 115035 Intergenic 7 2539 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs300778 chr2 111964 Intergenic 7 532 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.673, YRI:1.0;0.55 FUNCTIONAL_SNP rs300779 chr2 111486 Intergenic 7 1010 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs441469 chr2 129028 Intergenic 7 16532 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4643574 chr2 315215 Intergenic 5b ASSOCIATION 20125193 Cognitive test performance 5.30102999566 FAM150B - TMEM18 LEAD_SNP rs2947411 chr2 614168 Intergenic 7 ASSOCIATION 21102462 Menarche (age at onset) 7.69897000434 FAM150B - TMEM18 FUNCTIONAL_SNP rs12463617 chr2 629244 Intergenic 2b 15076 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs13393304 chr2 637830 Intergenic 2b 23662 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs1320338 chr2 649347 Intergenic 2b 35179 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs2867131 chr2 610603 Intergenic 2b 3565 CEU:1.0;0.828, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs6734363 chr2 635200 Intergenic 4 21032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6744646 chr2 628504 Intergenic 4 14336 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6744653 chr2 628524 Intergenic 4 14356 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.73 FUNCTIONAL_SNP rs6548238 chr2 634905 Intergenic 4 20737 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs10193244 chr2 647580 Intergenic 4 33412 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6728726 chr2 623976 Intergenic 5b 9808 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6719518 chr2 623935 Intergenic 5b 9767 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7576624 chr2 625029 Intergenic 5b 10861 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7576635 chr2 625057 Intergenic 5b 10889 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs939582 chr2 622723 Intergenic 5b 8555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs939583 chr2 622531 Intergenic 5b 8363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs939584 chr2 621558 Intergenic 5b 7390 CEU:1.0;0.905, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4854344 chr2 638144 Intergenic 5b 23976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs4854345 chr2 638190 Intergenic 5b 24022 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs4854349 chr2 647861 Intergenic 5b 33693 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs13401686 chr2 650519 Intergenic 5b 36351 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs4452188 chr2 648810 Intergenic 5b 34642 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.73 FUNCTIONAL_SNP rs6755502 chr2 635721 Intergenic 5b 21553 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;0.845 FUNCTIONAL_SNP rs13415094 chr2 653093 Intergenic 5b 38925 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs11127483 chr2 623691 Intergenic 5b 9523 CEU:1.0;0.898, CHB:1.0;0.846, JPT:1.0;1.0 FUNCTIONAL_SNP rs11127484 chr2 623798 Intergenic 5b 9630 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4613321 chr2 650647 Intergenic 5b 36479 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs5017303 chr2 630995 Intergenic 5b 16827 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs13007080 chr2 630024 Intergenic 5b 15856 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs13007086 chr2 630034 Intergenic 5b 15866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs13386964 chr2 650828 Intergenic 5b 36660 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs13388043 chr2 637597 Intergenic 5b 23429 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6548237 chr2 621461 Intergenic 5b 7293 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13386517 chr2 650479 Intergenic 5b 36311 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6711012 chr2 624034 Intergenic 5b 9866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13386627 chr2 650560 Intergenic 5b 36392 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs1320330 chr2 622225 Intergenic 5b 8057 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1320331 chr2 622161 Intergenic 5b 7993 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1320336 chr2 650012 Intergenic 5b 35844 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.82 FUNCTIONAL_SNP rs1320337 chr2 649867 Intergenic 5b 35699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs2867122 chr2 624581 Intergenic 5b 10413 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2867123 chr2 624524 Intergenic 5b 10356 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2867124 chr2 622857 Intergenic 5b 8689 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2867125 chr2 622827 Intergenic 5b 8659 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2903492 chr2 624678 Intergenic 5b 10510 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4423631 chr2 648758 Intergenic 5b 34590 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs13021737 chr2 632348 Intergenic 6 18180 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.739 FUNCTIONAL_SNP rs7561317 chr2 644953 Intergenic 6 30785 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs12992154 chr2 632300 Intergenic 6 18132 CEU:1.0;1.0 FUNCTIONAL_SNP rs5017300 chr2 631099 Intergenic 6 16931 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs7585056 chr2 631528 Intergenic 6 17360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.822 FUNCTIONAL_SNP rs2867109 chr2 651030 Intergenic 6 36862 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs12714415 chr2 651430 Intergenic 6 37262 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.845 FUNCTIONAL_SNP rs6743060 chr2 629510 Intergenic 7 15342 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs10188334 chr2 653874 Intergenic 7 39706 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.82 FUNCTIONAL_SNP rs4854348 chr2 647760 Intergenic 7 33592 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6731348 chr2 630339 Intergenic 7 16171 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs13012571 chr2 632550 Intergenic 7 18382 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs13397165 chr2 653354 Intergenic 7 39186 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6732471 chr2 629914 Intergenic 7 15746 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs11127485 chr2 632028 Intergenic 7 17860 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs11127491 chr2 646145 Intergenic 7 31977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs7567570 chr2 615140 Intergenic 7 972 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6752470 chr2 629694 Intergenic 7 15526 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs10190052 chr2 646674 Intergenic 7 32506 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.845 FUNCTIONAL_SNP rs10173167 chr2 646767 Intergenic 7 32599 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs7608050 chr2 652247 Intergenic 7 38079 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.845 FUNCTIONAL_SNP rs7570198 chr2 648198 Intergenic 7 34030 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.845 FUNCTIONAL_SNP rs2860323 chr2 614210 Intergenic 7 42 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7574359 chr2 652542 Intergenic 7 38374 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs12623218 chr2 632146 Intergenic 7 17978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs7604609 chr2 643303 Intergenic 7 29135 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs7601028 chr2 642499 Intergenic 7 28331 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.822 FUNCTIONAL_SNP rs12995480 chr2 629881 Intergenic 7 15713 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs2867108 chr2 650143 Intergenic 7 35975 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs2867110 chr2 651105 Intergenic 7 36937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs2867112 chr2 651349 Intergenic 7 37181 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs2867113 chr2 651365 Intergenic 7 37197 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6725549 chr2 630323 Intergenic 7 16155 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.788 FUNCTIONAL_SNP rs12714414 chr2 651407 Intergenic 7 37239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs10189761 chr2 646364 Intergenic 7 32196 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs13396935 chr2 653195 Intergenic 7 39027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6719980 chr2 651507 Intergenic 7 37339 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6731688 chr2 630662 Intergenic 7 16494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.82 FUNCTIONAL_SNP rs7571957 chr2 646803 Intergenic 7 32635 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 LEAD_SNP rs2867125 chr2 622827 Intergenic 5b ASSOCIATION 20935630 Body mass index 48.5228787453 FAM150B - TMEM18 FUNCTIONAL_SNP rs12463617 chr2 629244 Intergenic 2b 6417 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs1320338 chr2 649347 Intergenic 2b 26520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs13393304 chr2 637830 Intergenic 2b 15003 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs2867131 chr2 610603 Intergenic 2b 12224 CEU:1.0;0.828, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs6734363 chr2 635200 Intergenic 4 12373 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs6744646 chr2 628504 Intergenic 4 5677 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;0.608 FUNCTIONAL_SNP rs6744653 chr2 628524 Intergenic 4 5697 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.757 FUNCTIONAL_SNP rs6548238 chr2 634905 Intergenic 4 12078 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;0.783 FUNCTIONAL_SNP rs10193244 chr2 647580 Intergenic 4 24753 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs6728726 chr2 623976 Intergenic 5b 1149 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6719518 chr2 623935 Intergenic 5b 1108 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7576624 chr2 625029 Intergenic 5b 2202 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7576635 chr2 625057 Intergenic 5b 2230 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs939582 chr2 622723 Intergenic 5b 104 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs939583 chr2 622531 Intergenic 5b 296 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs939584 chr2 621558 Intergenic 5b 1269 CEU:1.0;0.905, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.847;0.717 FUNCTIONAL_SNP rs4854344 chr2 638144 Intergenic 5b 15317 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs4854345 chr2 638190 Intergenic 5b 15363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs4854349 chr2 647861 Intergenic 5b 25034 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs13401686 chr2 650519 Intergenic 5b 27692 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs4452188 chr2 648810 Intergenic 5b 25983 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.757 FUNCTIONAL_SNP rs6755502 chr2 635721 Intergenic 5b 12894 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs13415094 chr2 653093 Intergenic 5b 30266 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs11127483 chr2 623691 Intergenic 5b 864 CEU:1.0;0.898, CHB:1.0;0.846, JPT:1.0;1.0, YRI:1.0;0.791 FUNCTIONAL_SNP rs11127484 chr2 623798 Intergenic 5b 971 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4613321 chr2 650647 Intergenic 5b 27820 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs5017303 chr2 630995 Intergenic 5b 8168 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs13007080 chr2 630024 Intergenic 5b 7197 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs13007086 chr2 630034 Intergenic 5b 7207 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs13386964 chr2 650828 Intergenic 5b 28001 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs13388043 chr2 637597 Intergenic 5b 14770 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs6548237 chr2 621461 Intergenic 5b 1366 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13386517 chr2 650479 Intergenic 5b 27652 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs6711012 chr2 624034 Intergenic 5b 1207 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13386627 chr2 650560 Intergenic 5b 27733 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs1320330 chr2 622225 Intergenic 5b 602 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.7 FUNCTIONAL_SNP rs1320331 chr2 622161 Intergenic 5b 666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1320336 chr2 650012 Intergenic 5b 27185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.843 FUNCTIONAL_SNP rs1320337 chr2 649867 Intergenic 5b 27040 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs2867122 chr2 624581 Intergenic 5b 1754 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2867123 chr2 624524 Intergenic 5b 1697 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2867124 chr2 622857 Intergenic 5b 30 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2903492 chr2 624678 Intergenic 5b 1851 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4423631 chr2 648758 Intergenic 5b 25931 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs13021737 chr2 632348 Intergenic 6 9521 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.789 FUNCTIONAL_SNP rs7561317 chr2 644953 Intergenic 6 22126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs12992154 chr2 632300 Intergenic 6 9473 CEU:1.0;1.0, YRI:1.0;0.76 FUNCTIONAL_SNP rs5017300 chr2 631099 Intergenic 6 8272 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs7585056 chr2 631528 Intergenic 6 8701 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846, YRI:1.0;1.0 FUNCTIONAL_SNP rs2867109 chr2 651030 Intergenic 6 28203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs12714415 chr2 651430 Intergenic 6 28603 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs6743060 chr2 629510 Intergenic 7 6683 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs10188334 chr2 653874 Intergenic 7 31047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.843 FUNCTIONAL_SNP rs12995480 chr2 629881 Intergenic 7 7054 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs4854348 chr2 647760 Intergenic 7 24933 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs6731348 chr2 630339 Intergenic 7 7512 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs13012571 chr2 632550 Intergenic 7 9723 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs13397165 chr2 653354 Intergenic 7 30527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs6732471 chr2 629914 Intergenic 7 7087 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;0.734 FUNCTIONAL_SNP rs11127485 chr2 632028 Intergenic 7 9201 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs11127491 chr2 646145 Intergenic 7 23318 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs7567570 chr2 615140 Intergenic 7 7687 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6752470 chr2 629694 Intergenic 7 6867 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs10190052 chr2 646674 Intergenic 7 23847 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.863 FUNCTIONAL_SNP rs10173167 chr2 646767 Intergenic 7 23940 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs7608050 chr2 652247 Intergenic 7 29420 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.862 FUNCTIONAL_SNP rs7570198 chr2 648198 Intergenic 7 25371 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs2860323 chr2 614210 Intergenic 7 8617 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2947411 chr2 614168 Intergenic 7 8659 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7574359 chr2 652542 Intergenic 7 29715 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs12623218 chr2 632146 Intergenic 7 9319 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs7604609 chr2 643303 Intergenic 7 20476 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs7601028 chr2 642499 Intergenic 7 19672 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs2867108 chr2 650143 Intergenic 7 27316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs2867110 chr2 651105 Intergenic 7 28278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs2867112 chr2 651349 Intergenic 7 28522 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs2867113 chr2 651365 Intergenic 7 28538 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs6725549 chr2 630323 Intergenic 7 7496 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.821 FUNCTIONAL_SNP rs12714414 chr2 651407 Intergenic 7 28580 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs10189761 chr2 646364 Intergenic 7 23537 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs13396935 chr2 653195 Intergenic 7 30368 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs6719980 chr2 651507 Intergenic 7 28680 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs6731688 chr2 630662 Intergenic 7 7835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.844 FUNCTIONAL_SNP rs7571957 chr2 646803 Intergenic 7 23976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 LEAD_SNP rs6548238 chr2 634905 Intergenic 4 ASSOCIATION 19079261 Body mass index 18.0 FAM150B - TMEM18 FUNCTIONAL_SNP rs11127484 chr2 623798 Intergenic 5b 11107 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864, YRI:1.0;0.803 FUNCTIONAL_SNP rs1320331 chr2 622161 Intergenic 5b 12744 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864, YRI:1.0;0.803 FUNCTIONAL_SNP rs5017300 chr2 631099 Intergenic 6 3806 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.803 FUNCTIONAL_SNP rs7585056 chr2 631528 Intergenic 6 3377 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs6752470 chr2 629694 Intergenic 7 5211 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 LEAD_SNP rs7561317 chr2 644953 Intergenic 6 ASSOCIATION 19079260 Body mass index 16.3979400087 FAM150B - TMEM18 ASSOCIATION 19079260 Weight 17.6989700043 FAM150B - TMEM18 FUNCTIONAL_SNP rs1320338 chr2 649347 Intergenic 2b 4394 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4452188 chr2 648810 Intergenic 5b 3857 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs4854344 chr2 638144 Intergenic 5b 6809 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs13401686 chr2 650519 Intergenic 5b 5566 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13415094 chr2 653093 Intergenic 5b 8140 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs4613321 chr2 650647 Intergenic 5b 5694 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13386964 chr2 650828 Intergenic 5b 5875 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13386517 chr2 650479 Intergenic 5b 5526 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13386627 chr2 650560 Intergenic 5b 5607 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4423631 chr2 648758 Intergenic 5b 3805 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2867109 chr2 651030 Intergenic 6 6077 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12714415 chr2 651430 Intergenic 6 6477 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs11127491 chr2 646145 Intergenic 7 1192 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10190052 chr2 646674 Intergenic 7 1721 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10173167 chr2 646767 Intergenic 7 1814 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7608050 chr2 652247 Intergenic 7 7294 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;0.905 FUNCTIONAL_SNP rs7574359 chr2 652542 Intergenic 7 7589 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs7604609 chr2 643303 Intergenic 7 1650 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7601028 chr2 642499 Intergenic 7 2454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2867108 chr2 650143 Intergenic 7 5190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2867110 chr2 651105 Intergenic 7 6152 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2867112 chr2 651349 Intergenic 7 6396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2867113 chr2 651365 Intergenic 7 6412 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12714414 chr2 651407 Intergenic 7 6454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10189761 chr2 646364 Intergenic 7 1411 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6719980 chr2 651507 Intergenic 7 6554 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs7571957 chr2 646803 Intergenic 7 1850 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.808 LEAD_SNP rs6735179 chr2 1777150 Intergenic 5b ASSOCIATION 20195266 Response to antipsychotic treatment 7.0 PXDN - MYT1L FUNCTIONAL_SNP rs10048704 chr2 1777819 Intergenic 2b 669 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.601 FUNCTIONAL_SNP rs12475777 chr2 1773830 Intergenic 4 3320 CEU:1.0;0.813 FUNCTIONAL_SNP rs6745451 chr2 1776761 Intergenic 4 389 CEU:1.0;0.858 FUNCTIONAL_SNP rs1424921 chr2 1771874 Intergenic 5b 5276 CEU:1.0;0.951, CHB:1.0;0.707, JPT:1.0;0.638, YRI:0.958;0.918 FUNCTIONAL_SNP rs4143566 chr2 1771399 Intergenic 5b 5751 CEU:0.947;0.852, CHB:0.93;0.631, JPT:0.918;0.535, YRI:0.947;0.897 FUNCTIONAL_SNP rs6548058 chr2 1775108 Intergenic 5b 2042 CEU:1.0;0.808 FUNCTIONAL_SNP rs1124200 chr2 1778558 Intergenic 5b 1408 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs13432051 chr2 1770911 Intergenic 5b 6239 CEU:1.0;0.951, CHB:1.0;0.764, JPT:1.0;0.638 FUNCTIONAL_SNP rs6723862 chr2 1779260 Intergenic 7 2110 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;0.95, YRI:0.952;0.793 FUNCTIONAL_SNP rs12474950 chr2 1779683 Intergenic 7 2533 CEU:1.0;1.0, CHB:1.0;0.946, JPT:0.943;0.888, YRI:1.0;0.633 LEAD_SNP rs2241685 chr2 1925993 Intron 7 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.09691001301 MYT1L LEAD_SNP rs10199521 chr2 2519513 Intergenic 5b ASSOCIATION 21441570 Diabetic retinopathy 5.52287874528 MYT1L - TSSC1 FUNCTIONAL_SNP rs938141 chr2 2521840 Intergenic 5b 2327 CEU:1.0;1.0, JPT:1.0;0.523 FUNCTIONAL_SNP rs10199516 chr2 2519521 Intergenic 5b 8 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2668843 chr2 2521301 Intergenic 6 1788 CEU:1.0;1.0, JPT:1.0;0.523 FUNCTIONAL_SNP rs1706859 chr2 2517233 Intergenic 6 2280 CEU:1.0;0.946 FUNCTIONAL_SNP rs880464 chr2 2522589 Intergenic 7 3076 CEU:1.0;0.893 FUNCTIONAL_SNP rs2668841 chr2 2518798 Intergenic 7 715 CEU:1.0;0.946 LEAD_SNP rs11677370 chr2 3841420 Intergenic 6 ASSOCIATION 21490949 Type 2 diabetes 5.52287874528 DCDC2C - SOX11 LEAD_SNP rs1377638 chr2 5293525 Intergenic 7 ASSOCIATION 20595579 Longevity 6.52287874528 DCDC2C - SOX11 FUNCTIONAL_SNP rs10929427 chr2 5300664 Intergenic 5b 7139 CEU:1.0;0.828, CHB:1.0;0.909, JPT:1.0;0.903, YRI:1.0;1.0 FUNCTIONAL_SNP rs16863430 chr2 5293922 Intergenic 6 397 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs1377641 chr2 5300019 Intergenic 6 6494 CEU:1.0;0.827, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs13016681 chr2 5294941 Intergenic 6 1416 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16863424 chr2 5293199 Intergenic 7 326 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11696066 chr2 5295956 Intergenic 7 2431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs1377642 chr2 5300104 Intergenic 7 6579 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10495517 chr2 5296140 Intergenic 7 2615 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16863433 chr2 5294380 Intergenic 7 855 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 LEAD_SNP rs16864170 chr2 5907880 Intergenic 7 ASSOCIATION 20383146 Chronic kidney disease 6.69897000434 SOX11 - FLJ42418 FUNCTIONAL_SNP rs1157164 chr2 5974838 Intergenic 4 66958 CEU:1.0;0.866 FUNCTIONAL_SNP rs16864193 chr2 5921095 Intergenic 5a 13215 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2709453 chr2 5974622 Intergenic 5a 66742 CEU:1.0;0.866 FUNCTIONAL_SNP rs16864162 chr2 5906254 Intergenic 5b 1626 CEU:1.0;1.0 FUNCTIONAL_SNP rs16864239 chr2 5937663 Intergenic 6 29783 CEU:1.0;1.0 FUNCTIONAL_SNP rs16864344 chr2 5972896 Intergenic 6 65016 CEU:1.0;0.866 FUNCTIONAL_SNP rs16864330 chr2 5965206 Intergenic 6 57326 CEU:1.0;0.866 FUNCTIONAL_SNP rs2563999 chr2 5973886 Intergenic 6 66006 CEU:1.0;0.866 FUNCTIONAL_SNP rs2564002 chr2 5975588 Intergenic 7 67708 CEU:1.0;0.848 FUNCTIONAL_SNP rs2709450 chr2 5974386 Intergenic 7 66506 CEU:1.0;0.866 FUNCTIONAL_SNP rs10187762 chr2 5975505 Intergenic 7 67625 CEU:1.0;0.866 FUNCTIONAL_SNP rs2722583 chr2 5942145 Intergenic 7 34265 CEU:1.0;1.0 FUNCTIONAL_SNP rs16864155 chr2 5902740 Intergenic 7 5140 CEU:1.0;1.0 LEAD_SNP rs1405262 chr2 6134940 Intergenic 7 ASSOCIATION 20041166 HIV-1 control 5.22184874962 SOX11 - FLJ42418 FUNCTIONAL_SNP rs2609087 chr2 6128566 Intergenic 5a 6374 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.907 FUNCTIONAL_SNP rs2609090 chr2 6131940 Intergenic 5b 3000 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12473006 chr2 6161972 Intergenic 6 27032 CEU:1.0;1.0, CHB:0.947;0.779, JPT:1.0;0.907 FUNCTIONAL_SNP rs16864620 chr2 6180072 Intergenic 6 45132 CEU:1.0;1.0, CHB:0.935;0.574, JPT:0.839;0.64 FUNCTIONAL_SNP rs12464178 chr2 6153942 Intergenic 7 19002 CEU:1.0;1.0, CHB:0.947;0.779, JPT:1.0;0.909 FUNCTIONAL_SNP rs1405260 chr2 6165399 Intergenic 7 30459 CEU:1.0;1.0, CHB:0.944;0.734, JPT:0.95;0.86 FUNCTIONAL_SNP rs16864622 chr2 6180693 Intergenic 7 45753 CEU:1.0;1.0, CHB:0.935;0.574, JPT:0.839;0.64 LEAD_SNP rs6741819 chr2 7147973 Intron 2b ASSOCIATION 20195266 Response to antipsychotic treatment 6.69897000434 RNF144A FUNCTIONAL_SNP rs700943 chr2 7126569 Intron 5b 21404 CEU:1.0;0.831, CHB:1.0;0.65, JPT:1.0;1.0 FUNCTIONAL_SNP rs10495549 chr2 7142367 Intron 6 5606 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10495548 chr2 7137435 Intron 7 10538 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs771263 chr2 7128967 Intron 7 19006 CEU:1.0;0.831, CHB:1.0;0.65, JPT:1.0;1.0 FUNCTIONAL_SNP rs771265 chr2 7129744 Intron 7 18229 CEU:1.0;0.831, CHB:1.0;0.65, JPT:1.0;1.0 FUNCTIONAL_SNP rs771266 chr2 7130931 Intron 7 17042 CEU:1.0;0.831, CHB:1.0;0.65, JPT:1.0;1.0 FUNCTIONAL_SNP rs2292931 chr2 7137488 Intron 7 10485 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13008689 chr2 8530256 Intergenic 5a ASSOCIATION 20834067 Longevity 6.0 RNF144A - ID2 FUNCTIONAL_SNP rs12692353 chr2 8530204 Intergenic 5a 52 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13009356 chr2 8530522 Intergenic 7 266 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7587928 chr2 8949070 Intron 6 ASSOCIATION 21507922 Neutrophil count 6.69897000434 KIDINS220 FUNCTIONAL_SNP rs13010033 chr2 8940116 Intron 6 8954 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;0.863, YRI:1.0;0.956 LEAD_SNP rs1109670 chr2 9250038 Intergenic 7 ASSOCIATION 19010793 Multiple sclerosis 5.04575749056 RPL30P3 - ASAP2 LEAD_SNP rs2357266 chr2 9924387 Intergenic 6 ASSOCIATION 20707712 Self-rated health 5.39794000867 YWHAQ - TAF1B LEAD_SNP rs6739054 chr2 11220562 Intergenic 5b ASSOCIATION 20125193 Cognitive test performance 5.69897000434 KCNF1 - RPL6P4 LEAD_SNP rs6716724 chr2 11510948 Intergenic 4 ASSOCIATION 21658281 Sudden cardiac arrest 6.22184874962 LOC650157 FUNCTIONAL_SNP rs4641909 chr2 11504916 Intron 4 6032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs13024110 chr2 11506499 Intergenic 5a 4449 CEU:0.928;0.86, CHB:1.0;0.943, JPT:1.0;0.816, YRI:1.0;0.644 FUNCTIONAL_SNP rs4668722 chr2 11509480 Intergenic 7 1468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.603 FUNCTIONAL_SNP rs10202323 chr2 11512429 Intergenic 7 1481 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs17605562 chr2 12037179 Intergenic 7 ASSOCIATION 19896111 Hair morphology 5.04575749056 LPIN1 - ST13P1 LEAD_SNP rs10929808 chr2 12568996 Intron 5b ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.39794000867 ST13P1 - TRIB2 FUNCTIONAL_SNP rs6736172 chr2 12569011 Intron 5b 15 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.706 FUNCTIONAL_SNP rs4668761 chr2 12561059 Intron 7 7937 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs16858813 chr2 12544698 Intron 7 24298 CEU:1.0;1.0, CHB:0.952;0.907, JPT:0.951;0.905, YRI:1.0;0.607 FUNCTIONAL_SNP rs10177407 chr2 12565967 Intron 7 3029 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 LEAD_SNP rs1534422 chr2 12640741 Intron 7 ASSOCIATION 19430480 Type 1 diabetes 5.69897000434 ST13P1 - TRIB2 LEAD_SNP rs7581919 chr2 15664756 Intron 5b ASSOCIATION 20585324 Conduct disorder (case status) 5.09691001301 NBAS LEAD_SNP rs7586898 chr2 15961599 Intergenic 7 ASSOCIATION 19896111 Hair morphology 5.69897000434 DDX1 - RPLP1P5 FUNCTIONAL_SNP rs2380693 chr2 15958429 Intergenic 4 3170 CEU:1.0;0.863 FUNCTIONAL_SNP rs4585001 chr2 15958254 Intergenic 5a 3345 CEU:1.0;0.856 FUNCTIONAL_SNP rs4468787 chr2 15958285 Intergenic 5a 3314 CEU:1.0;0.863 FUNCTIONAL_SNP rs4669002 chr2 15957408 Intergenic 5a 4191 CEU:1.0;0.863 FUNCTIONAL_SNP rs7598030 chr2 15957549 Intergenic 5a 4050 CEU:1.0;0.863 FUNCTIONAL_SNP rs7564786 chr2 15955908 Intergenic 5a 5691 CEU:1.0;0.863 FUNCTIONAL_SNP rs7567886 chr2 15956348 Intergenic 5b 5251 CEU:1.0;0.863 FUNCTIONAL_SNP rs12476579 chr2 15956607 Intergenic 5b 4992 CEU:1.0;0.848 FUNCTIONAL_SNP rs11676338 chr2 15955510 Intergenic 5b 6089 CEU:1.0;0.863 FUNCTIONAL_SNP rs4668998 chr2 15953638 Intergenic 5b 7961 CEU:1.0;0.863 FUNCTIONAL_SNP rs4668999 chr2 15953808 Intergenic 5b 7791 CEU:1.0;0.863, YRI:0.895;0.692 FUNCTIONAL_SNP rs7569101 chr2 15951457 Intergenic 5b 10142 CEU:1.0;0.822, CHB:1.0;0.957, JPT:1.0;1.0, YRI:1.0;0.609 FUNCTIONAL_SNP rs7578959 chr2 15956143 Intergenic 5b 5456 CEU:1.0;0.863 FUNCTIONAL_SNP rs12991492 chr2 15954652 Intergenic 5b 6947 CEU:1.0;0.863 FUNCTIONAL_SNP rs4668467 chr2 15952315 Intergenic 5b 9284 CEU:1.0;0.863 FUNCTIONAL_SNP rs4233843 chr2 15953702 Intergenic 5b 7897 CEU:1.0;0.863 FUNCTIONAL_SNP rs7591293 chr2 15956192 Intergenic 5b 5407 CEU:1.0;0.863 FUNCTIONAL_SNP rs11901571 chr2 15955093 Intergenic 6 6506 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12472318 chr2 15956656 Intergenic 6 4943 CEU:1.0;0.856 FUNCTIONAL_SNP rs7583876 chr2 15952212 Intergenic 7 9387 CEU:1.0;0.805, CHB:1.0;0.955, JPT:1.0;1.0, YRI:0.942;0.636 FUNCTIONAL_SNP rs7571850 chr2 15957763 Intergenic 7 3836 CEU:1.0;0.863 FUNCTIONAL_SNP rs2380695 chr2 15958962 Intergenic 7 2637 CEU:1.0;0.847 FUNCTIONAL_SNP rs2380696 chr2 15958990 Intergenic 7 2609 CEU:1.0;0.863 FUNCTIONAL_SNP rs2380697 chr2 15959355 Intergenic 7 2244 CEU:1.0;0.863 FUNCTIONAL_SNP rs2380698 chr2 15959366 Intergenic 7 2233 CEU:1.0;0.856 FUNCTIONAL_SNP rs7571746 chr2 15957702 Intergenic 7 3897 CEU:1.0;0.863 FUNCTIONAL_SNP rs11887025 chr2 15961256 Intergenic 7 343 CEU:1.0;0.856 FUNCTIONAL_SNP rs12472394 chr2 15956721 Intergenic 7 4878 CEU:1.0;0.863 FUNCTIONAL_SNP rs4668995 chr2 15953274 Intergenic 7 8325 CEU:1.0;0.863 FUNCTIONAL_SNP rs4668996 chr2 15953381 Intergenic 7 8218 CEU:1.0;0.847 FUNCTIONAL_SNP rs4669001 chr2 15957255 Intergenic 7 4344 CEU:1.0;0.838 FUNCTIONAL_SNP rs11692763 chr2 15955533 Intergenic 7 6066 CEU:1.0;0.863 FUNCTIONAL_SNP rs9678949 chr2 15953045 Intergenic 7 8554 CEU:1.0;0.863 FUNCTIONAL_SNP rs10929393 chr2 15958063 Intergenic 7 3536 CEU:1.0;0.822, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs16984239 chr2 18234446 Intron 7 ASSOCIATION 17362836 Amyotrophic lateral sclerosis 5.69897000434 KCNS3 - RDH14 LEAD_SNP rs7580332 chr2 18540644 Intron 7 ASSOCIATION 18084291 Amyotrophic lateral sclerosis 5.04575749056 KCNS3 - RDH14 FUNCTIONAL_SNP rs7562205 chr2 18539036 Intron 5b 1608 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1027157 chr2 18544761 Intergenic 5b 4117 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs7570149 chr2 18541472 Intron 6 828 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7592367 chr2 18540686 Intron 7 42 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12621767 chr2 18542037 Intron 7 1393 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1876040 chr2 19134748 Intergenic 5b ASSOCIATION 20125193 Cognitive test performance 7.22184874962 NT5C1B - OSR1 LEAD_SNP rs7565124 chr2 20261685 Intergenic 7 ASSOCIATION 21621269 Major depressive disorder 5.69897000434 LAPTM4A - RPS16P2 FUNCTIONAL_SNP rs12472043 chr2 20256838 Intergenic 7 4847 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12471796 chr2 20256192 Intergenic 7 5493 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13021401 chr2 20688519 Intergenic 5a ASSOCIATION 21750679 Systemic sclerosis 5.52287874528 RHOB - RPS25P3 FUNCTIONAL_SNP rs342089 chr2 20699667 Exon,non-coding 6 11148 CEU:1.0;0.834, CHB:1.0;0.949, JPT:1.0;0.953, YRI:1.0;0.792 FUNCTIONAL_SNP rs13010768 chr2 20699625 Exon,non-coding 6 11106 CEU:1.0;0.838, CHB:1.0;0.949, JPT:1.0;0.953, YRI:1.0;0.792 FUNCTIONAL_SNP rs342063 chr2 20690564 Intergenic 4 2045 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs342072 chr2 20685154 Intergenic 5b 3365 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs12995242 chr2 20686657 Intergenic 5b 1862 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs342093 chr2 20697744 Intergenic 6 9225 CEU:1.0;1.0, CHB:0.943;0.89, JPT:1.0;1.0 FUNCTIONAL_SNP rs342094 chr2 20697704 Intergenic 6 9185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.788;0.513 FUNCTIONAL_SNP rs676621 chr2 20684161 Intergenic 7 4358 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs13017877 chr2 20699997 Intron 7 11478 CEU:1.0;0.838, CHB:1.0;0.949, JPT:1.0;0.909, YRI:1.0;0.792 FUNCTIONAL_SNP rs342064 chr2 20689804 Intergenic 7 1285 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs342069 chr2 20685595 Intergenic 7 2924 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs342070 chr2 20685471 Intergenic 7 3048 CEU:1.0;1.0, CHB:0.947;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs342091 chr2 20698085 Intergenic 7 9566 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:0.788;0.513 FUNCTIONAL_SNP rs12993933 chr2 20686771 Intergenic 7 1748 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0, YRI:1.0;0.701 LEAD_SNP rs13385191 chr2 20888265 Intron 6 ASSOCIATION 20676098 Prostate cancer 7.09691001301 C2orf43 LEAD_SNP rs4971516 chr2 20903015 Intron 6 ASSOCIATION 21059979 LDL cholesterol 39.6989700043 C2orf43 ASSOCIATION 21059979 LDL cholesterol 51.6989700043 C2orf43 FUNCTIONAL_SNP rs12469741 chr2 20928577 Intron 5a 25562 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864 FUNCTIONAL_SNP rs4971518 chr2 20904997 Intron 6 1982 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs4971532 chr2 20904111 Intron 7 1096 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.89 FUNCTIONAL_SNP rs12467020 chr2 20894422 Intron 7 8593 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs16987997 chr2 20894169 Intron 7 8846 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs4971517 chr2 20904078 Intron 7 1063 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7569328 chr2 21100778 Intergenic 5b ASSOCIATION 21347282 Coronary heart disease 7.0 C2orf43 - APOB LEAD_SNP rs11902417 chr2 21198900 Intergenic 7 ASSOCIATION 20864672 HDL cholesterol 6.39794000867 C2orf43 - APOB FUNCTIONAL_SNP rs676210 chr2 21231524 Coding 5a 32624 CEU:1.0;0.874, CHB:0.942;0.841, JPT:0.947;0.896, YRI:0.934;0.772 FUNCTIONAL_SNP rs1042034 chr2 21225281 Coding 7 26381 CEU:1.0;0.813, CHB:0.942;0.841, JPT:0.883;0.701, YRI:0.927;0.706 FUNCTIONAL_SNP rs7557067 chr2 21208211 Intergenic 4 9311 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.855 FUNCTIONAL_SNP rs673548 chr2 21237544 Intron 5a 38644 CEU:1.0;0.874, CHB:0.944;0.891, JPT:0.941;0.759, YRI:1.0;0.725 FUNCTIONAL_SNP rs2678379 chr2 21226560 Intron 5a 27660 CEU:1.0;0.873, CHB:0.883;0.78, JPT:0.945;0.893, YRI:1.0;0.646 FUNCTIONAL_SNP rs4564803 chr2 21205502 Intergenic 6 6602 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6544366 chr2 21204025 Intergenic 6 5125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs6728178 chr2 21193946 Intergenic 7 4954 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.944 FUNCTIONAL_SNP rs6711016 chr2 21123352 Intergenic 7 75548 CEU:0.931;0.812 FUNCTIONAL_SNP rs10184054 chr2 21203877 Intergenic 7 4977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs6754295 chr2 21206183 Intergenic 7 7283 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.659 LEAD_SNP rs6544366 chr2 21204025 Intergenic 6 ASSOCIATION 20864672 Triglycerides 6.69897000434 C2orf43 - APOB FUNCTIONAL_SNP rs676210 chr2 21231524 Coding 5a 27499 CEU:1.0;0.874, CHB:0.942;0.841, JPT:0.947;0.896, YRI:1.0;0.937 FUNCTIONAL_SNP rs1042034 chr2 21225281 Coding 7 21256 CEU:1.0;0.813, CHB:0.942;0.841, JPT:0.883;0.701, YRI:0.93;0.865 FUNCTIONAL_SNP rs7557067 chr2 21208211 Intergenic 4 4186 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs673548 chr2 21237544 Intron 5a 33519 CEU:1.0;0.874, CHB:0.944;0.891, JPT:0.941;0.759, YRI:1.0;0.601 FUNCTIONAL_SNP rs2678379 chr2 21226560 Intron 5a 22535 CEU:1.0;0.873, CHB:0.883;0.78, JPT:0.945;0.893, YRI:1.0;0.53 FUNCTIONAL_SNP rs4564803 chr2 21205502 Intergenic 6 1477 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs6728178 chr2 21193946 Intergenic 7 10079 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.783 FUNCTIONAL_SNP rs11902417 chr2 21198900 Intergenic 7 5125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs6711016 chr2 21123352 Intergenic 7 80673 CEU:0.931;0.812 FUNCTIONAL_SNP rs10184054 chr2 21203877 Intergenic 7 148 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6754295 chr2 21206183 Intergenic 7 2158 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.546 LEAD_SNP rs6754295 chr2 21206183 Intergenic 7 ASSOCIATION 19060911 HDL cholesterol 7.39794000867 C2orf43 - APOB ASSOCIATION 19060911 Triglycerides 7.52287874528 C2orf43 - APOB LEAD_SNP rs7557067 chr2 21208211 Intergenic 4 ASSOCIATION 19060906 Triglycerides 11.0457574906 C2orf43 - APOB FUNCTIONAL_SNP rs676210 chr2 21231524 Coding 5a 23313 CEU:1.0;0.854, CHB:0.942;0.841, JPT:0.945;0.848, YRI:1.0;0.923 FUNCTIONAL_SNP rs4564803 chr2 21205502 Intergenic 6 2709 CEU:1.0;1.0, CHB:0.947;0.898, JPT:1.0;0.952, YRI:1.0;0.864 FUNCTIONAL_SNP rs6544366 chr2 21204025 Intergenic 6 4186 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs11902417 chr2 21198900 Intergenic 7 9311 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.855 FUNCTIONAL_SNP rs10184054 chr2 21203877 Intergenic 7 4334 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs693 chr2 21232195 Coding 5a ASSOCIATION 19060911 Cholesterol, total 22.0457574906 APOB ASSOCIATION 19060911 LDL cholesterol 16.3979400087 APOB ASSOCIATION 19060910 LDL cholesterol 10.5228787453 APOB ASSOCIATION 18193044 LDL cholesterol 21.0 APOB ASSOCIATION 18193044 Triglycerides 6.69897000434 APOB ASSOCIATION 17463246 Triglycerides 6.15490195999 APOB LEAD_SNP rs673548 chr2 21237544 Intron 5a ASSOCIATION 19060910 Other metabolic traits 7.69897000434 APOB FUNCTIONAL_SNP rs2678379 chr2 21226560 Intron 5a 10984 CEU:1.0;1.0, CHB:0.942;0.888, JPT:1.0;0.853, YRI:1.0;0.859 LEAD_SNP rs515135 chr2 21286057 Intergenic 7 ASSOCIATION 20864672 LDL cholesterol 19.6989700043 APOB - KLHL29 ASSOCIATION 19060906 LDL cholesterol 28.3010299957 APOB - KLHL29 FUNCTIONAL_SNP rs544039 chr2 21398985 Intergenic 2b 112928 CEU:1.0;0.848 FUNCTIONAL_SNP rs1652417 chr2 21396517 Intergenic 3a 110460 CEU:1.0;0.901 FUNCTIONAL_SNP rs1712251 chr2 21396551 Intergenic 4 110494 CEU:1.0;0.849 FUNCTIONAL_SNP rs312985 chr2 21378805 Intergenic 4 92748 CEU:1.0;0.851 FUNCTIONAL_SNP rs1652416 chr2 21396609 Intergenic 4 110552 CEU:1.0;0.901 FUNCTIONAL_SNP rs1652418 chr2 21388456 Intergenic 4 102399 CEU:1.0;0.901 FUNCTIONAL_SNP rs541569 chr2 21398768 Intergenic 4 112711 CEU:1.0;0.857 FUNCTIONAL_SNP rs12714264 chr2 21265518 Intron 5a 20539 CEU:1.0;0.832 FUNCTIONAL_SNP rs529697 chr2 21387948 Intergenic 5a 101891 CEU:1.0;0.857 FUNCTIONAL_SNP rs1367119 chr2 21386375 Intergenic 5b 100318 CEU:1.0;0.898 FUNCTIONAL_SNP rs1367120 chr2 21386304 Intergenic 5b 100247 CEU:1.0;0.901 FUNCTIONAL_SNP rs507616 chr2 21397321 Intergenic 5b 111264 CEU:1.0;0.878 FUNCTIONAL_SNP rs477146 chr2 21396334 Intergenic 5b 110277 CEU:1.0;0.894 FUNCTIONAL_SNP rs522250 chr2 21387113 Intergenic 6 101056 CEU:1.0;0.898 FUNCTIONAL_SNP rs837137 chr2 21377935 Intergenic 6 91878 CEU:1.0;0.857 FUNCTIONAL_SNP rs480787 chr2 21390169 Intergenic 6 104112 CEU:1.0;0.857 FUNCTIONAL_SNP rs578095 chr2 21393866 Intergenic 6 107809 CEU:1.0;0.901 FUNCTIONAL_SNP rs553523 chr2 21394798 Intergenic 6 108741 CEU:1.0;0.897 FUNCTIONAL_SNP rs17041988 chr2 21420697 Intergenic 6 134640 CEU:1.0;0.857 FUNCTIONAL_SNP rs563290 chr2 21288226 Intergenic 6 2169 CEU:1.0;1.0 FUNCTIONAL_SNP rs561850 chr2 21395805 Intergenic 6 109748 CEU:1.0;0.894 FUNCTIONAL_SNP rs312970 chr2 21369815 Intergenic 6 83758 CEU:1.0;0.851 FUNCTIONAL_SNP rs527034 chr2 21382786 Intergenic 6 96729 CEU:1.0;0.851 FUNCTIONAL_SNP rs10169543 chr2 21423989 Intergenic 6 137932 CEU:1.0;0.851 FUNCTIONAL_SNP rs576203 chr2 21393623 Intergenic 6 107566 CEU:1.0;0.851 FUNCTIONAL_SNP rs522963 chr2 21386957 Intergenic 6 100900 CEU:1.0;0.857 FUNCTIONAL_SNP rs486139 chr2 21390674 Intergenic 6 104617 CEU:1.0;0.857 FUNCTIONAL_SNP rs540439 chr2 21391978 Intergenic 6 105921 CEU:1.0;0.897 FUNCTIONAL_SNP rs10221876 chr2 21419809 Intergenic 6 133752 CEU:1.0;0.857 FUNCTIONAL_SNP rs572246 chr2 21385149 Intergenic 6 99092 CEU:1.0;0.942 FUNCTIONAL_SNP rs573314 chr2 21385161 Intergenic 6 99104 CEU:1.0;0.901 FUNCTIONAL_SNP rs17399838 chr2 21368217 Intergenic 6 82160 CEU:0.941;0.836 FUNCTIONAL_SNP rs544655 chr2 21384441 Intergenic 6 98384 CEU:1.0;0.925 FUNCTIONAL_SNP rs538528 chr2 21391740 Intergenic 6 105683 CEU:1.0;0.901 FUNCTIONAL_SNP rs554414 chr2 21394892 Intergenic 6 108835 CEU:1.0;0.937 FUNCTIONAL_SNP rs7578527 chr2 21422403 Intergenic 6 136346 CEU:1.0;0.857 FUNCTIONAL_SNP rs556504 chr2 21395261 Intergenic 6 109204 CEU:1.0;0.901 FUNCTIONAL_SNP rs563280 chr2 21392153 Intergenic 6 106096 CEU:1.0;0.857 FUNCTIONAL_SNP rs496100 chr2 21394614 Intergenic 6 108557 CEU:1.0;0.899 FUNCTIONAL_SNP rs12712940 chr2 21426743 Intergenic 6 140686 CEU:1.0;0.857 FUNCTIONAL_SNP rs563696 chr2 21389430 Intergenic 6 103373 CEU:1.0;0.901 FUNCTIONAL_SNP rs501863 chr2 21390000 Intergenic 7 103943 CEU:1.0;0.893 FUNCTIONAL_SNP rs568938 chr2 21303616 Intergenic 7 17559 CEU:1.0;0.901 FUNCTIONAL_SNP rs483436 chr2 21390407 Intergenic 7 104350 CEU:1.0;1.0 FUNCTIONAL_SNP rs312944 chr2 21325188 Intergenic 7 39131 CEU:1.0;0.897 FUNCTIONAL_SNP rs1712247 chr2 21383951 Intergenic 7 97894 CEU:1.0;0.851 FUNCTIONAL_SNP rs1712250 chr2 21386058 Intergenic 7 100001 CEU:1.0;0.898 FUNCTIONAL_SNP rs548506 chr2 21385541 Intergenic 7 99484 CEU:1.0;0.867 FUNCTIONAL_SNP rs562338 chr2 21288321 Intergenic 7 2264 CEU:1.0;1.0 FUNCTIONAL_SNP rs7567217 chr2 21303470 Intergenic 7 17413 CEU:1.0;0.886 FUNCTIONAL_SNP rs570033 chr2 21399567 Intergenic 7 113510 CEU:1.0;0.857 FUNCTIONAL_SNP rs473269 chr2 21395830 Intergenic 7 109773 CEU:1.0;0.897 FUNCTIONAL_SNP rs1652419 chr2 21385649 Intergenic 7 99592 CEU:1.0;0.897 FUNCTIONAL_SNP rs1652420 chr2 21383881 Intergenic 7 97824 CEU:1.0;0.857 FUNCTIONAL_SNP rs1652421 chr2 21383848 Intergenic 7 97791 CEU:1.0;0.942 FUNCTIONAL_SNP rs560844 chr2 21389108 Intergenic 7 103051 CEU:1.0;0.945 FUNCTIONAL_SNP rs506585 chr2 21397182 Intergenic 7 111125 CEU:1.0;0.851 FUNCTIONAL_SNP rs492255 chr2 21384272 Intergenic 7 98215 CEU:1.0;0.897 FUNCTIONAL_SNP rs478442 chr2 21399216 Intergenic 7 113159 CEU:1.0;0.851 FUNCTIONAL_SNP rs494315 chr2 21400950 Intergenic 7 114893 CEU:1.0;0.857 FUNCTIONAL_SNP rs532225 chr2 21397637 Intergenic 7 111580 CEU:1.0;0.857 FUNCTIONAL_SNP rs5002500 chr2 21399974 Intergenic 7 113917 CEU:1.0;0.857 FUNCTIONAL_SNP rs558342 chr2 21395469 Intergenic 7 109412 CEU:1.0;0.897 FUNCTIONAL_SNP rs4591370 chr2 21383742 Intergenic 7 97685 CEU:1.0;0.851 FUNCTIONAL_SNP rs4560142 chr2 21383717 Intergenic 7 97660 CEU:1.0;0.851 FUNCTIONAL_SNP rs668948 chr2 21291529 Intergenic 7 5472 CEU:1.0;1.0 FUNCTIONAL_SNP rs560408 chr2 21398379 Intergenic 7 112322 CEU:1.0;0.857 FUNCTIONAL_SNP rs581411 chr2 21289432 Intergenic 7 3375 CEU:1.0;1.0 FUNCTIONAL_SNP rs483621 chr2 21397035 Intergenic 7 110978 CEU:1.0;0.857 FUNCTIONAL_SNP rs504616 chr2 21414020 Intergenic 7 127963 CEU:1.0;0.857 FUNCTIONAL_SNP rs538928 chr2 21389019 Intergenic 7 102962 CEU:1.0;0.857 FUNCTIONAL_SNP rs479545 chr2 21389897 Intergenic 7 103840 CEU:0.944;0.843 FUNCTIONAL_SNP rs532300 chr2 21381608 Intergenic 7 95551 CEU:1.0;0.857 FUNCTIONAL_SNP rs559967 chr2 21395598 Intergenic 7 109541 CEU:1.0;0.881 FUNCTIONAL_SNP rs486246 chr2 21406751 Intergenic 7 120694 CEU:1.0;0.857 FUNCTIONAL_SNP rs541041 chr2 21294975 Intergenic 7 8918 CEU:1.0;1.0 FUNCTIONAL_SNP rs478588 chr2 21297149 Intergenic 7 11092 CEU:1.0;0.949 FUNCTIONAL_SNP rs494465 chr2 21401010 Intergenic 7 114953 CEU:1.0;0.857 FUNCTIONAL_SNP rs614303 chr2 21313577 Intergenic 7 27520 CEU:1.0;0.949 FUNCTIONAL_SNP rs1878512 chr2 21420358 Intergenic 7 134301 CEU:1.0;0.849 FUNCTIONAL_SNP rs531380 chr2 21397561 Intergenic 7 111504 CEU:1.0;0.857 FUNCTIONAL_SNP rs17042000 chr2 21422928 Intergenic 7 136871 CEU:1.0;0.857 FUNCTIONAL_SNP rs480732 chr2 21390149 Intergenic 7 104092 CEU:1.0;0.901 FUNCTIONAL_SNP rs574438 chr2 21399961 Intergenic 7 113904 CEU:1.0;0.857 FUNCTIONAL_SNP rs574461 chr2 21400013 Intergenic 7 113956 CEU:1.0;0.901 LEAD_SNP rs562338 chr2 21288321 Intergenic 7 ASSOCIATION 18262040 LDL cholesterol 9.0 APOB - KLHL29 ASSOCIATION 18193043 LDL cholesterol 21.2218487496 APOB - KLHL29 LEAD_SNP rs541041 chr2 21294975 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 5.09691001301 APOB - KLHL29 FUNCTIONAL_SNP rs544039 chr2 21398985 Intergenic 2b 104010 CEU:1.0;0.841 FUNCTIONAL_SNP rs1652417 chr2 21396517 Intergenic 3a 101542 CEU:1.0;0.896, CHB:1.0;1.0 FUNCTIONAL_SNP rs1712251 chr2 21396551 Intergenic 4 101576 CEU:1.0;0.842, CHB:1.0;1.0 FUNCTIONAL_SNP rs312985 chr2 21378805 Intergenic 4 83830 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs1652416 chr2 21396609 Intergenic 4 101634 CEU:1.0;0.896, CHB:1.0;1.0 FUNCTIONAL_SNP rs1652418 chr2 21388456 Intergenic 4 93481 CEU:1.0;0.896, CHB:1.0;1.0 FUNCTIONAL_SNP rs541569 chr2 21398768 Intergenic 4 103793 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs12714264 chr2 21265518 Intron 5a 29457 CEU:1.0;0.832 FUNCTIONAL_SNP rs529697 chr2 21387948 Intergenic 5a 92973 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs1367119 chr2 21386375 Intergenic 5b 91400 CEU:1.0;0.893 FUNCTIONAL_SNP rs507616 chr2 21397321 Intergenic 5b 102346 CEU:1.0;0.871, CHB:1.0;1.0 FUNCTIONAL_SNP rs477146 chr2 21396334 Intergenic 5b 101359 CEU:1.0;0.889, CHB:1.0;1.0 FUNCTIONAL_SNP rs1367120 chr2 21386304 Intergenic 5b 91329 CEU:1.0;0.896, CHB:1.0;1.0 FUNCTIONAL_SNP rs522250 chr2 21387113 Intergenic 6 92138 CEU:1.0;0.893, CHB:1.0;1.0 FUNCTIONAL_SNP rs837137 chr2 21377935 Intergenic 6 82960 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs480787 chr2 21390169 Intergenic 6 95194 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs578095 chr2 21393866 Intergenic 6 98891 CEU:1.0;0.896, CHB:1.0;1.0 FUNCTIONAL_SNP rs553523 chr2 21394798 Intergenic 6 99823 CEU:1.0;0.893, CHB:1.0;1.0 FUNCTIONAL_SNP rs17041988 chr2 21420697 Intergenic 6 125722 CEU:1.0;0.851 FUNCTIONAL_SNP rs563280 chr2 21392153 Intergenic 6 97178 CEU:1.0;0.851 FUNCTIONAL_SNP rs563290 chr2 21288226 Intergenic 6 6749 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.738 FUNCTIONAL_SNP rs561850 chr2 21395805 Intergenic 6 100830 CEU:1.0;0.889, CHB:1.0;1.0 FUNCTIONAL_SNP rs312970 chr2 21369815 Intergenic 6 74840 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs527034 chr2 21382786 Intergenic 6 87811 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs10169543 chr2 21423989 Intergenic 6 129014 CEU:1.0;0.851 FUNCTIONAL_SNP rs576203 chr2 21393623 Intergenic 6 98648 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs522963 chr2 21386957 Intergenic 6 91982 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs486139 chr2 21390674 Intergenic 6 95699 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs540439 chr2 21391978 Intergenic 6 97003 CEU:1.0;0.893, CHB:1.0;1.0 FUNCTIONAL_SNP rs10221876 chr2 21419809 Intergenic 6 124834 CEU:1.0;0.851 FUNCTIONAL_SNP rs572246 chr2 21385149 Intergenic 6 90174 CEU:1.0;0.939, CHB:1.0;1.0 FUNCTIONAL_SNP rs573314 chr2 21385161 Intergenic 6 90186 CEU:1.0;0.896, CHB:1.0;1.0 FUNCTIONAL_SNP rs17399838 chr2 21368217 Intergenic 6 73242 CEU:0.941;0.836, CHB:1.0;1.0 FUNCTIONAL_SNP rs544655 chr2 21384441 Intergenic 6 89466 CEU:1.0;0.92, CHB:1.0;1.0 FUNCTIONAL_SNP rs538528 chr2 21391740 Intergenic 6 96765 CEU:1.0;0.896, CHB:1.0;1.0 FUNCTIONAL_SNP rs554414 chr2 21394892 Intergenic 6 99917 CEU:1.0;0.934 FUNCTIONAL_SNP rs7578527 chr2 21422403 Intergenic 6 127428 CEU:1.0;0.851 FUNCTIONAL_SNP rs556504 chr2 21395261 Intergenic 6 100286 CEU:1.0;0.896, CHB:1.0;1.0 FUNCTIONAL_SNP rs496100 chr2 21394614 Intergenic 6 99639 CEU:1.0;0.895, CHB:1.0;1.0 FUNCTIONAL_SNP rs12712940 chr2 21426743 Intergenic 6 131768 CEU:1.0;0.851 FUNCTIONAL_SNP rs563696 chr2 21389430 Intergenic 6 94455 CEU:1.0;0.896, CHB:1.0;1.0 FUNCTIONAL_SNP rs515135 chr2 21286057 Intergenic 7 8918 CEU:1.0;1.0 FUNCTIONAL_SNP rs501863 chr2 21390000 Intergenic 7 95025 CEU:1.0;0.888 FUNCTIONAL_SNP rs568938 chr2 21303616 Intergenic 7 8641 CEU:1.0;0.897, CHB:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs483436 chr2 21390407 Intergenic 7 95432 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs312944 chr2 21325188 Intergenic 7 30213 CEU:1.0;0.893, CHB:1.0;1.0 FUNCTIONAL_SNP rs1712247 chr2 21383951 Intergenic 7 88976 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs1712250 chr2 21386058 Intergenic 7 91083 CEU:1.0;0.893, CHB:1.0;1.0 FUNCTIONAL_SNP rs548506 chr2 21385541 Intergenic 7 90566 CEU:1.0;0.859, CHB:1.0;1.0 FUNCTIONAL_SNP rs562338 chr2 21288321 Intergenic 7 6654 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.909 FUNCTIONAL_SNP rs570033 chr2 21399567 Intergenic 7 104592 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs473269 chr2 21395830 Intergenic 7 100855 CEU:1.0;0.893, CHB:1.0;1.0 FUNCTIONAL_SNP rs1652419 chr2 21385649 Intergenic 7 90674 CEU:1.0;0.893, CHB:1.0;1.0 FUNCTIONAL_SNP rs1652420 chr2 21383881 Intergenic 7 88906 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs1652421 chr2 21383848 Intergenic 7 88873 CEU:1.0;0.939, CHB:1.0;1.0 FUNCTIONAL_SNP rs560844 chr2 21389108 Intergenic 7 94133 CEU:1.0;0.942, CHB:1.0;1.0 FUNCTIONAL_SNP rs506585 chr2 21397182 Intergenic 7 102207 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs492255 chr2 21384272 Intergenic 7 89297 CEU:1.0;0.893, CHB:1.0;1.0 FUNCTIONAL_SNP rs478442 chr2 21399216 Intergenic 7 104241 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs494315 chr2 21400950 Intergenic 7 105975 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs532225 chr2 21397637 Intergenic 7 102662 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs5002500 chr2 21399974 Intergenic 7 104999 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs558342 chr2 21395469 Intergenic 7 100494 CEU:1.0;0.892, CHB:1.0;1.0 FUNCTIONAL_SNP rs4591370 chr2 21383742 Intergenic 7 88767 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs4560142 chr2 21383717 Intergenic 7 88742 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs668948 chr2 21291529 Intergenic 7 3446 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs560408 chr2 21398379 Intergenic 7 103404 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs581411 chr2 21289432 Intergenic 7 5543 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.657 FUNCTIONAL_SNP rs483621 chr2 21397035 Intergenic 7 102060 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs504616 chr2 21414020 Intergenic 7 119045 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs538928 chr2 21389019 Intergenic 7 94044 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs479545 chr2 21389897 Intergenic 7 94922 CEU:0.941;0.835, CHB:1.0;1.0 FUNCTIONAL_SNP rs532300 chr2 21381608 Intergenic 7 86633 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs559967 chr2 21395598 Intergenic 7 100623 CEU:1.0;0.879, CHB:1.0;1.0 FUNCTIONAL_SNP rs486246 chr2 21406751 Intergenic 7 111776 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs7567217 chr2 21303470 Intergenic 7 8495 CEU:1.0;0.88, CHB:1.0;1.0 FUNCTIONAL_SNP rs478588 chr2 21297149 Intergenic 7 2174 CEU:1.0;0.946, CHB:1.0;1.0, YRI:1.0;0.737 FUNCTIONAL_SNP rs494465 chr2 21401010 Intergenic 7 106035 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs614303 chr2 21313577 Intergenic 7 18602 CEU:1.0;0.946, CHB:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs1878512 chr2 21420358 Intergenic 7 125383 CEU:1.0;0.849 FUNCTIONAL_SNP rs531380 chr2 21397561 Intergenic 7 102586 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs17042000 chr2 21422928 Intergenic 7 127953 CEU:1.0;0.851 FUNCTIONAL_SNP rs480732 chr2 21390149 Intergenic 7 95174 CEU:1.0;0.896, CHB:1.0;1.0 FUNCTIONAL_SNP rs574438 chr2 21399961 Intergenic 7 104986 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs574461 chr2 21400013 Intergenic 7 105038 CEU:1.0;0.896, CHB:1.0;1.0 LEAD_SNP rs4635554 chr2 21389659 Intergenic 7 ASSOCIATION 20657596 Hypertriglyceridemia 6.69897000434 APOB - KLHL29 LEAD_SNP rs219553 chr2 21577743 Intergenic 7 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.15490195999 APOB - KLHL29 LEAD_SNP rs1117324 chr2 21840093 Intergenic 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.52287874528 APOB - KLHL29 FUNCTIONAL_SNP rs6729222 chr2 21843860 Intergenic 5b 3767 CEU:1.0;0.824, JPT:1.0;0.565 FUNCTIONAL_SNP rs7574035 chr2 21852781 Intergenic 5b 12688 CEU:1.0;0.825, JPT:0.894;0.799, YRI:0.909;0.631 FUNCTIONAL_SNP rs1476119 chr2 21830629 Intergenic 5b 9464 CEU:1.0;0.825, CHB:1.0;0.576, JPT:1.0;0.897, YRI:1.0;0.734 FUNCTIONAL_SNP rs17042744 chr2 21824822 Intergenic 5b 15271 CEU:1.0;0.825, CHB:1.0;0.576, JPT:1.0;0.796, YRI:1.0;0.705 FUNCTIONAL_SNP rs1476120 chr2 21832196 Intergenic 6 7897 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs2161900 chr2 21824056 Intergenic 6 16037 CEU:1.0;1.0, CHB:0.909;0.826, JPT:1.0;1.0, YRI:1.0;0.622 FUNCTIONAL_SNP rs6547710 chr2 21845184 Intergenic 6 5091 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs7563186 chr2 21844898 Intergenic 6 4805 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs1991126 chr2 21822998 Intergenic 6 17095 CEU:1.0;1.0, CHB:0.909;0.826, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs1991127 chr2 21830196 Intergenic 6 9897 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs6742615 chr2 21828134 Intergenic 7 11959 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs4665379 chr2 21831713 Intergenic 7 8380 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs7607302 chr2 21832036 Intergenic 7 8057 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs2113625 chr2 21828618 Intergenic 7 11475 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs889961 chr2 21846170 Intergenic 7 6077 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs889962 chr2 21846186 Intergenic 7 6093 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs4665970 chr2 21823323 Intergenic 7 16770 CEU:1.0;1.0, CHB:0.909;0.826, JPT:1.0;0.897, YRI:1.0;0.963 FUNCTIONAL_SNP rs2194558 chr2 21843315 Intergenic 7 3222 CEU:1.0;0.825 FUNCTIONAL_SNP rs6547633 chr2 21832621 Intergenic 7 7472 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs7593678 chr2 21835773 Intergenic 7 4320 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs17680118 chr2 21847562 Intergenic 7 7469 CEU:1.0;0.825, JPT:0.866;0.597 FUNCTIONAL_SNP rs17680142 chr2 21849671 Intergenic 7 9578 CEU:1.0;0.825, JPT:0.866;0.598 FUNCTIONAL_SNP rs6547745 chr2 21852552 Intergenic 7 12459 CEU:1.0;0.825, JPT:0.894;0.799, YRI:0.909;0.631 FUNCTIONAL_SNP rs4665994 chr2 21845701 Intergenic 7 5608 CEU:1.0;0.825, CHB:1.0;0.576, JPT:1.0;0.897, YRI:1.0;0.705 FUNCTIONAL_SNP rs2194571 chr2 21833368 Intergenic 7 6725 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs918897 chr2 21825860 Intergenic 7 14233 CEU:1.0;0.825, CHB:1.0;0.576, JPT:1.0;0.897 FUNCTIONAL_SNP rs918900 chr2 21826118 Intergenic 7 13975 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs2005912 chr2 21842020 Intergenic 7 1927 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs2216880 chr2 21826935 Intergenic 7 13158 CEU:1.0;0.825, JPT:1.0;0.51 FUNCTIONAL_SNP rs1991128 chr2 21830377 Intergenic 7 9716 CEU:1.0;0.825, JPT:1.0;0.51 LEAD_SNP rs17043947 chr2 22736987 Intron 7 ASSOCIATION 20707712 Self-rated health 6.69897000434 APOB - KLHL29 FUNCTIONAL_SNP rs10175489 chr2 22738904 Intron 7 1917 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13015955 chr2 22822159 Intergenic 5a ASSOCIATION 21347282 Coronary heart disease 6.39794000867 APOB - KLHL29 LEAD_SNP rs2681019 chr2 23187504 Intergenic 7 ASSOCIATION 21546767 Dialysis-related mortality 7.09691001301 APOB - KLHL29 LEAD_SNP rs1449984 chr2 23414651 Intergenic 5b ASSOCIATION 20800221 Depression--quantitative trait 5.15490195999 APOB - KLHL29 FUNCTIONAL_SNP rs1449968 chr2 23442158 Intergenic 6 27507 CEU:1.0;0.881 FUNCTIONAL_SNP rs1375864 chr2 23410734 Intergenic 7 3917 CEU:1.0;1.0, CHB:1.0;0.811, JPT:1.0;1.0 LEAD_SNP rs2577720 chr2 23548614 Intergenic 6 ASSOCIATION 21326311 F-cell distribution 5.09691001301 APOB - KLHL29 LEAD_SNP rs4665630 chr2 23898317 Intron 6 ASSOCIATION 21347282 Coronary heart disease 7.0 KLHL29 LEAD_SNP rs7561273 chr2 24247514 Intron 5b ASSOCIATION 19197348 Quantitative traits 5.22184874962 MFSD2B FUNCTIONAL_SNP rs4665652 chr2 24250023 Intergenic 7 2509 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.896, YRI:1.0;1.0 FUNCTIONAL_SNP rs2339940 chr2 24251787 Intergenic 7 4273 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.896, YRI:1.0;0.964 LEAD_SNP rs6707600 chr2 24521766 Intron 7 ASSOCIATION 21107309 Working memory 5.52287874528 ITSN2 LEAD_SNP rs2165738 chr2 24692809 Intergenic 5b ASSOCIATION 18978792 Type 1 diabetes 5.39794000867 RPL36AP13 - NCOA1 LEAD_SNP rs713586 chr2 25158008 Intergenic 5b ASSOCIATION 20935630 Body mass index 21.2218487496 ADCY3 - DNAJC27 FUNCTIONAL_SNP rs11676272 chr2 25141538 Coding 5b 16470 CEU:1.0;0.889, CHB:1.0;0.863, JPT:0.937;0.629 FUNCTIONAL_SNP rs10182181 chr2 25150296 Intergenic 5b 7712 CEU:1.0;0.924, CHB:1.0;0.907, JPT:0.94;0.663 FUNCTIONAL_SNP rs6752378 chr2 25150116 Intergenic 5b 7892 CEU:1.0;0.924, CHB:1.0;0.907, JPT:0.94;0.663 FUNCTIONAL_SNP rs713587 chr2 25158281 Intergenic 5b 273 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2384054 chr2 25156773 Intergenic 7 1235 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4665736 chr2 25187599 Intron 7 ASSOCIATION 20881960 Height 15.15490196 DNAJC27 FUNCTIONAL_SNP rs1172294 chr2 25169200 Exon,non-coding 7 18399 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11125884 chr2 25239264 Intron 6 51665 CEU:0.96;0.922, CHB:0.948;0.818, JPT:0.851;0.724, YRI:1.0;1.0 FUNCTIONAL_SNP rs12466350 chr2 25239969 Intron 6 52370 CEU:0.96;0.922, CHB:0.948;0.818, JPT:0.851;0.724, YRI:1.0;1.0 FUNCTIONAL_SNP rs1077492 chr2 25286435 Intron 6 98836 CEU:0.96;0.922, CHB:0.95;0.86, JPT:0.851;0.724, YRI:1.0;1.0 FUNCTIONAL_SNP rs754536 chr2 25176200 Intron 6 11399 CEU:1.0;0.927, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1982200 chr2 25205427 Intron 7 17828 CEU:0.96;0.922, CHB:0.952;0.905, JPT:0.898;0.769, YRI:1.0;0.792 FUNCTIONAL_SNP rs754537 chr2 25176277 Intron 7 11322 CEU:1.0;0.927, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4665276 chr2 25213333 Intron 7 25734 CEU:0.962;0.926, CHB:0.953;0.908, JPT:0.904;0.78, YRI:1.0;1.0 LEAD_SNP rs6733301 chr2 25276284 Intron 6 ASSOCIATION 18391951 Height 6.09691001301 EFR3B LEAD_SNP rs13428812 chr2 25492467 Intron 6 ASSOCIATION 21102463 Crohn's disease 9.04575749056 DNMT3A FUNCTIONAL_SNP rs7583409 chr2 25491056 Intron 4 1411 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.605 FUNCTIONAL_SNP rs7578575 chr2 25488819 Intron 5b 3648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.574 LEAD_SNP rs11684202 chr2 25887558 Intron 2b ASSOCIATION 21347282 Coronary heart disease 5.22184874962 DTNB FUNCTIONAL_SNP rs6721334 chr2 25892491 Intron 2b 4933 CEU:1.0;0.884, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11681175 chr2 25894532 Intron 4 6974 CEU:1.0;0.916, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17391976 chr2 25894556 Intron 4 6998 CEU:1.0;0.916, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11689092 chr2 25887091 Intron 6 467 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.907, YRI:1.0;1.0 FUNCTIONAL_SNP rs11688001 chr2 25893740 Intron 6 6182 CEU:1.0;0.879, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6715001 chr2 25886631 Intron 6 927 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.907, YRI:1.0;1.0 FUNCTIONAL_SNP rs1465541 chr2 25889403 Intron 7 1845 CEU:1.0;0.844, CHB:1.0;0.935, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1260326 chr2 27730940 Coding 7 ASSOCIATION 21300955 C-reactive protein 39.3010299957 GCKR ASSOCIATION 20657596 Hypertriglyceridemia 8.15490195999 GCKR ASSOCIATION 20383146 Chronic kidney disease 13.5228787453 GCKR ASSOCIATION 20139978 Hematological and biochemical traits 8.39794000867 GCKR ASSOCIATION 20081857 Two-hour glucose challenge 9.52287874528 GCKR ASSOCIATION 19060906 Triglycerides 30.6989700043 GCKR ASSOCIATION 19060910 Other metabolic traits 9.39794000867 GCKR ASSOCIATION 18454146 Waist circumference and related phenotypes 7.39794000867 GCKR FUNCTIONAL_SNP rs780094 chr2 27741237 Intron 4 10297 CEU:1.0;0.919, CHB:0.95;0.86, JPT:0.948;0.816 FUNCTIONAL_SNP rs2950835 chr2 27750545 Intergenic 5b 19605 CEU:0.916;0.839, CHB:0.95;0.86, JPT:0.899;0.77 FUNCTIONAL_SNP rs780093 chr2 27742603 Intron 5b 11663 CEU:1.0;0.919, CHB:0.95;0.86, JPT:0.948;0.816, YRI:0.875;0.614 FUNCTIONAL_SNP rs2911711 chr2 27750546 Intergenic 5b 19606 CEU:0.916;0.839, CHB:0.95;0.86, JPT:0.899;0.77 FUNCTIONAL_SNP rs1260333 chr2 27748624 Intergenic 7 17684 CEU:0.956;0.877, CHB:0.943;0.843, JPT:0.884;0.705 LEAD_SNP rs780094 chr2 27741237 Intron 4 ASSOCIATION 20081858 Fasting glucose-related traits 23.5228787453 GCKR ASSOCIATION 20081858 Fasting glucose-related traits 19.3979400087 GCKR ASSOCIATION 20081858 Fasting glucose-related traits 37.2218487496 GCKR ASSOCIATION 20081858 Fasting insulin-related traits 23.5228787453 GCKR ASSOCIATION 20081858 Fasting insulin-related traits 19.3979400087 GCKR ASSOCIATION 19503597 Serum uric acid 9.0 GCKR ASSOCIATION 19060911 Triglycerides 19.5228787453 GCKR ASSOCIATION 18439548 C-reactive protein 14.15490196 GCKR ASSOCIATION 18193044 Triglycerides 13.5228787453 GCKR ASSOCIATION 18193043 Triglycerides 31.2218487496 GCKR ASSOCIATION 18179892 LDL cholesterol 6.30102999566 GCKR FUNCTIONAL_SNP rs1260326 chr2 27730940 Coding 7 10297 CEU:1.0;0.919, CHB:0.95;0.86, JPT:0.948;0.816 FUNCTIONAL_SNP rs2950835 chr2 27750545 Intergenic 5b 9308 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs780093 chr2 27742603 Intron 5b 1366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.665 FUNCTIONAL_SNP rs2911711 chr2 27750546 Intergenic 5b 9309 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs1260333 chr2 27748624 Intergenic 7 7387 CEU:1.0;0.959, CHB:1.0;1.0, JPT:0.947;0.896 LEAD_SNP rs780093 chr2 27742603 Intron 5b ASSOCIATION 21386085 Triglycerides-Blood Pressure (TG-BP) 9.52287874528 GCKR ASSOCIATION 21386085 Waist Circumference - Triglycerides (WC-TG) 11.6989700043 GCKR ASSOCIATION 21102463 Crohn's disease 10.3010299957 GCKR ASSOCIATION 20884846 Serum urate 16.3979400087 GCKR ASSOCIATION 20705733 Serum calcium 5.15490195999 GCKR FUNCTIONAL_SNP rs1260326 chr2 27730940 Coding 7 11663 CEU:1.0;0.919, CHB:0.95;0.86, JPT:0.948;0.816, YRI:0.875;0.614 FUNCTIONAL_SNP rs780094 chr2 27741237 Intron 4 1366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.665 FUNCTIONAL_SNP rs2950835 chr2 27750545 Intergenic 5b 7942 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs2911711 chr2 27750546 Intergenic 5b 7943 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs1260333 chr2 27748624 Intergenic 7 6021 CEU:1.0;0.959, CHB:1.0;1.0, JPT:0.947;0.896 LEAD_SNP rs1260333 chr2 27748624 Intergenic 7 ASSOCIATION 20864672 Triglycerides 18.6989700043 GCKR - C2orf16 FUNCTIONAL_SNP rs1260326 chr2 27730940 Coding 7 17684 CEU:0.956;0.877, CHB:0.943;0.843, JPT:0.884;0.705 FUNCTIONAL_SNP rs780094 chr2 27741237 Intron 4 7387 CEU:1.0;0.959, CHB:1.0;1.0, JPT:0.947;0.896 FUNCTIONAL_SNP rs2950835 chr2 27750545 Intergenic 5b 1921 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.959 FUNCTIONAL_SNP rs780093 chr2 27742603 Intron 5b 6021 CEU:1.0;0.959, CHB:1.0;1.0, JPT:0.947;0.896 FUNCTIONAL_SNP rs2911711 chr2 27750546 Intergenic 5b 1922 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.961 LEAD_SNP rs1919128 chr2 27801759 Coding 7 ASSOCIATION 21386085 Waist Circumference - Triglycerides (WC-TG) 8.69897000434 C2orf16 FUNCTIONAL_SNP rs1919127 chr2 27801493 Coding 7 266 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2384656 chr2 27832055 Intron 5b 30296 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs13022873 chr2 27815510 Intron 5b 13751 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs6760250 chr2 27812252 Intron 5b 10493 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4665382 chr2 27783801 Intron 5b 17958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4665987 chr2 27755825 Intergenic 6 45934 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.904 FUNCTIONAL_SNP rs4665991 chr2 27766284 Intron 6 35475 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4666002 chr2 27840640 Intron 6 38881 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.94 FUNCTIONAL_SNP rs4666000 chr2 27839369 Intron 6 37610 CEU:1.0;0.901, CHB:1.0;1.0, JPT:1.0;0.95 FUNCTIONAL_SNP rs12467476 chr2 27825715 Intron 7 23956 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4665383 chr2 27791555 Intergenic 7 10204 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13002853 chr2 27853245 Intron 7 51486 CEU:1.0;0.948 FUNCTIONAL_SNP rs12478841 chr2 27811722 Intron 7 9963 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs2068834 chr2 27839539 Intron 7 37780 CEU:1.0;0.896, CHB:1.0;1.0, JPT:1.0;0.95 FUNCTIONAL_SNP rs10208529 chr2 27786188 Intron 7 15571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs13022873 chr2 27815510 Intron 5b ASSOCIATION 21386085 Waist Circumference - Triglycerides (WC-TG) 8.30102999566 ZNF512 FUNCTIONAL_SNP rs1919127 chr2 27801493 Coding 7 14017 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs1919128 chr2 27801759 Coding 7 13751 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs4665382 chr2 27783801 Intron 5b 31709 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs6760250 chr2 27812252 Intron 5b 3258 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.938 FUNCTIONAL_SNP rs2384656 chr2 27832055 Intron 5b 16545 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.945 FUNCTIONAL_SNP rs4665987 chr2 27755825 Intergenic 6 59685 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.906, YRI:1.0;0.945 FUNCTIONAL_SNP rs4665991 chr2 27766284 Intron 6 49226 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs4666000 chr2 27839369 Intron 6 23859 CEU:1.0;0.899, CHB:1.0;0.952, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs4666002 chr2 27840640 Intron 6 25130 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.942 FUNCTIONAL_SNP rs10208529 chr2 27786188 Intron 7 29322 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.945 FUNCTIONAL_SNP rs12467476 chr2 27825715 Intron 7 10205 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4665383 chr2 27791555 Intergenic 7 23955 CEU:1.0;0.944, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs2068834 chr2 27839539 Intron 7 24029 CEU:1.0;0.889, CHB:1.0;0.951, JPT:1.0;0.95, YRI:1.0;0.94 FUNCTIONAL_SNP rs13002853 chr2 27853245 Intron 7 37735 CEU:1.0;0.948 FUNCTIONAL_SNP rs12478841 chr2 27811722 Intron 7 3788 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 LEAD_SNP rs3749147 chr2 27851918 Coding 4 ASSOCIATION 21386085 Waist Circumference - Triglycerides (WC-TG) 9.0 GPN1;CCDC121 LEAD_SNP rs882632 chr2 29280761 Intergenic 7 ASSOCIATION 20125088 Major depressive disorder 5.69897000434 FAM179A - C2orf71 FUNCTIONAL_SNP rs882631 chr2 29280791 Intergenic 7 30 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7579944 chr2 30445026 Intergenic 4 ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 8.0 YPEL5 - LBH FUNCTIONAL_SNP rs10175798 chr2 30449594 Intergenic 2b 4568 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.951, YRI:1.0;0.858 FUNCTIONAL_SNP rs906868 chr2 30448344 Intergenic 4 3318 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.951, YRI:1.0;0.68 FUNCTIONAL_SNP rs12473138 chr2 30447432 Intergenic 5a 2406 CEU:1.0;0.959, CHB:1.0;0.86, JPT:1.0;0.862, YRI:1.0;0.898 FUNCTIONAL_SNP rs1355208 chr2 30445322 Intergenic 5a 296 CEU:1.0;1.0, CHB:1.0;0.562, JPT:1.0;0.702 FUNCTIONAL_SNP rs10173253 chr2 30443460 Intergenic 7 1566 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.949 LEAD_SNP rs647316 chr2 31464829 Intron 4 ASSOCIATION 19820697 Mean platelet volume 10.5228787453 EHD3 FUNCTIONAL_SNP rs649729 chr2 31464385 Intron 7 444 CEU:1.0;0.95, CHB:1.0;0.779 LEAD_SNP rs3769528 chr2 33471192 Intron 7 ASSOCIATION 20189936 Height 7.09691001301 LTBP1 LEAD_SNP rs41464348 chr2 33527299 Intron 7 ASSOCIATION 19893584 Height 5.15490195999 LTBP1 FUNCTIONAL_SNP rs7575377 chr2 33527571 Intron 5b 272 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13385731 chr2 33701890 Intron 4 ASSOCIATION 19838193 Systemic lupus erythematosus 15.0 RASGRP3 LEAD_SNP rs6733379 chr2 34480075 Intron 5b ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.39794000867 SLC25A5P2 - MRPL50P1 LEAD_SNP rs6750486 chr2 35526918 Intergenic 7 ASSOCIATION 20585324 Conduct disorder (symptom count) 5.22184874962 SLC25A5P2 - MRPL50P1 LEAD_SNP rs1863080 chr2 36526436 Intergenic 7 ASSOCIATION 19260139 Anthropometric traits 5.09691001301 MRPL50P1 - RPL21P36 FUNCTIONAL_SNP rs11902532 chr2 36528309 Intergenic 7 1873 CEU:1.0;0.847, CHB:1.0;0.815, JPT:1.0;0.84, YRI:1.0;0.924 LEAD_SNP rs7562790 chr2 36673555 Intron 5b ASSOCIATION 21076409 Ventricular conduction 8.09691001301 CRIM1 FUNCTIONAL_SNP rs888078 chr2 36681193 Intron 4 7638 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.84 FUNCTIONAL_SNP rs3770876 chr2 36679028 Intron 4 5473 CEU:1.0;0.957, CHB:1.0;0.778, JPT:1.0;0.682 FUNCTIONAL_SNP rs2216101 chr2 36640405 Intron 5b 33150 CEU:0.952;0.829, CHB:1.0;0.789, JPT:0.915;0.674 FUNCTIONAL_SNP rs1017154 chr2 36683708 Intron 5b 10153 CEU:1.0;0.836 FUNCTIONAL_SNP rs1523787 chr2 36673774 Intron 5b 219 CEU:1.0;1.0, CHB:1.0;0.773, JPT:1.0;0.671 FUNCTIONAL_SNP rs3770900 chr2 36652816 Intron 7 20739 CEU:0.955;0.836, CHB:0.94;0.687, JPT:1.0;0.682 FUNCTIONAL_SNP rs2840167 chr2 36683316 Intron 7 9761 CEU:0.956;0.915, CHB:1.0;1.0, JPT:1.0;0.8 FUNCTIONAL_SNP rs2160367 chr2 36681619 Intron 7 8064 CEU:1.0;0.918, CHB:1.0;0.778, JPT:0.921;0.62 LEAD_SNP rs17020136 chr2 37248015 Intron 2b ASSOCIATION 21076409 Ventricular conduction 8.69897000434 HEATR5B FUNCTIONAL_SNP rs17020125 chr2 37241050 Coding 7 6965 CEU:1.0;0.946, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs1123648 chr2 37232330 Intron 2b 15685 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.607 FUNCTIONAL_SNP rs6753260 chr2 37238516 Intron 4 9499 CEU:1.0;0.949, CHB:0.952;0.907, JPT:1.0;1.0, YRI:1.0;0.609 FUNCTIONAL_SNP rs3770770 chr2 37192866 Intron 5b 55149 CEU:1.0;0.89, CHB:0.947;0.814, JPT:1.0;0.951 FUNCTIONAL_SNP rs6709006 chr2 37212057 Intron 6 35958 CEU:0.948;0.899, CHB:0.938;0.654, JPT:0.946;0.711 FUNCTIONAL_SNP rs3796041 chr2 37217622 Intron 6 30393 CEU:1.0;0.949, CHB:1.0;0.911, JPT:1.0;0.956 FUNCTIONAL_SNP rs10084334 chr2 37250891 Intron 6 2876 CEU:1.0;0.821, CHB:0.938;0.654, JPT:1.0;0.729 FUNCTIONAL_SNP rs11694342 chr2 37236821 Intron 7 11194 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17038861 chr2 37233265 Intron 7 14750 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6723869 chr2 37220811 Intron 7 27204 CEU:1.0;0.937, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11682782 chr2 37213186 Intron 7 34829 CEU:0.945;0.894, CHB:0.934;0.642, JPT:0.944;0.733 LEAD_SNP rs4352210 chr2 37750980 Intergenic 5b ASSOCIATION 20031603 RR interval (heart rate) 5.69897000434 QPCT - CDC42EP3 FUNCTIONAL_SNP rs10165975 chr2 37757330 Intergenic 5b 6350 CEU:0.952;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.891 FUNCTIONAL_SNP rs4670727 chr2 37760784 Intergenic 5b 9804 CEU:1.0;0.95, CHB:1.0;0.944, JPT:1.0;1.0 FUNCTIONAL_SNP rs12472489 chr2 37752784 Intergenic 6 1804 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs4461243 chr2 37761719 Intergenic 6 10739 CEU:1.0;0.954, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.88;0.693 FUNCTIONAL_SNP rs4538180 chr2 37762760 Intergenic 6 11780 CEU:1.0;0.954, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.917;0.723 FUNCTIONAL_SNP rs4430920 chr2 37757877 Intergenic 7 6897 CEU:0.952;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.736 FUNCTIONAL_SNP rs9309009 chr2 37754020 Intergenic 7 3040 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;0.897, YRI:0.92;0.814 LEAD_SNP rs4670766 chr2 37940542 Intergenic 4 ASSOCIATION 21116278 Total ventricular volume 5.69897000434 CDC42EP3 - FAM82A1 FUNCTIONAL_SNP rs11891785 chr2 37941892 Intergenic 4 1350 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6719744 chr2 37939547 Intergenic 5b 995 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13415952 chr2 37947754 Intergenic 5b 7212 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6706147 chr2 37939616 Intergenic 5b 926 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12470676 chr2 37942862 Intergenic 6 2320 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6706011 chr2 37939491 Intergenic 6 1051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1001708 chr2 37949670 Intergenic 7 9128 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs17511102 chr2 37960613 Intergenic 5b ASSOCIATION 20881960 Height 17.6989700043 CDC42EP3 - FAM82A1 LEAD_SNP rs604381 chr2 37977017 Intergenic 7 ASSOCIATION 18846501 Conduct disorder (interaction) 5.09691001301 CDC42EP3 - FAM82A1 LEAD_SNP rs4670779 chr2 38044344 Intergenic 6 ASSOCIATION 19079262 Bone mineral density (spine) 5.39794000867 LOC344382 LEAD_SNP rs6741148 chr2 38277832 Intron 6 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.39794000867 FAM82A1 LEAD_SNP rs6741892 chr2 38916970 Coding 5a ASSOCIATION 21339755 5-HTT brain serotonin transporter levels 5.30102999566 GALM FUNCTIONAL_SNP rs12712612 chr2 38907605 Intron 5b 9365 CEU:1.0;1.0, CHB:1.0;0.911, JPT:0.936;0.875 FUNCTIONAL_SNP rs12469534 chr2 38912029 Intron 5b 4941 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs13006376 chr2 38914251 Intron 6 2719 CEU:1.0;0.849 FUNCTIONAL_SNP rs17576507 chr2 38910131 Intron 6 6839 CEU:1.0;1.0, CHB:1.0;0.911, JPT:0.936;0.875 FUNCTIONAL_SNP rs4670885 chr2 38910402 Intron 7 6568 CEU:1.0;1.0, CHB:1.0;0.911, JPT:0.936;0.875 FUNCTIONAL_SNP rs13010022 chr2 38909706 Intron 7 7264 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs13383762 chr2 38907001 Intron 7 9969 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.938 FUNCTIONAL_SNP rs17576472 chr2 38903022 Intron 7 13948 CEU:1.0;0.866, CHB:1.0;0.911, JPT:0.936;0.875 FUNCTIONAL_SNP rs12987870 chr2 38936539 Intron 7 19569 CEU:1.0;0.866, JPT:1.0;0.515 LEAD_SNP rs3099950 chr2 39109558 Coding 6 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 5.09691001301 MORN2 LEAD_SNP rs2716734 chr2 39947721 Intergenic 7 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.69897000434 TMEM178 - THUMPD2 LEAD_SNP rs2540226 chr2 39959060 Intergenic 7 ASSOCIATION 18957941 Personality dimensions 5.52287874528 TMEM178 - THUMPD2 LEAD_SNP rs719593 chr2 42004997 Intergenic 5a ASSOCIATION 18846501 Conduct disorder (interaction) 5.30102999566 SLC8A1 - LDHAL3 LEAD_SNP rs4952590 chr2 42276921 Intron 5b ASSOCIATION 19961619 Atopy 5.69897000434 PKDCC FUNCTIONAL_SNP rs1044305 chr2 42284884 Exon,non-coding 7 7963 CEU:0.898;0.806, CHB:0.949;0.858, JPT:1.0;0.859 FUNCTIONAL_SNP rs12475650 chr2 42268956 Intergenic 4 7965 CEU:1.0;0.913, CHB:0.949;0.901, JPT:0.946;0.849 FUNCTIONAL_SNP rs12475676 chr2 42268975 Intergenic 4 7946 CEU:1.0;0.918, CHB:0.949;0.901, JPT:0.948;0.855 FUNCTIONAL_SNP rs12478300 chr2 42219599 Intergenic 4 57322 CEU:1.0;0.918 FUNCTIONAL_SNP rs1550431 chr2 42280970 Intron 4 4049 CEU:1.0;0.913, CHB:1.0;0.908, JPT:1.0;1.0 FUNCTIONAL_SNP rs12472780 chr2 42269245 Intergenic 5a 7676 CEU:1.0;0.913, CHB:0.947;0.896, JPT:0.948;0.855 FUNCTIONAL_SNP rs4952397 chr2 42266513 Intergenic 5a 10408 CEU:1.0;0.913, CHB:0.951;0.904, JPT:0.948;0.855 FUNCTIONAL_SNP rs6758105 chr2 42261600 Intergenic 5a 15321 CEU:1.0;0.918, CHB:0.948;0.857, JPT:0.948;0.855 FUNCTIONAL_SNP rs1078025 chr2 42218334 Intergenic 5b 58587 CEU:1.0;0.918 FUNCTIONAL_SNP rs4952587 chr2 42270131 Intergenic 5b 6790 CEU:1.0;0.918, CHB:0.945;0.893, JPT:0.946;0.849 FUNCTIONAL_SNP rs729559 chr2 42272984 Intergenic 5b 3937 CEU:1.0;0.918, CHB:1.0;1.0, JPT:0.948;0.855 FUNCTIONAL_SNP rs4952562 chr2 42225089 Intergenic 5b 51832 CEU:1.0;0.918 FUNCTIONAL_SNP rs12479347 chr2 42259456 Intergenic 5b 17465 CEU:1.0;0.918, CHB:0.948;0.857, JPT:0.94;0.722 FUNCTIONAL_SNP rs13384438 chr2 42265408 Intergenic 6 11513 CEU:1.0;0.918, CHB:0.951;0.904, JPT:0.948;0.855 FUNCTIONAL_SNP rs13409978 chr2 42265702 Intergenic 6 11219 CEU:1.0;0.918, CHB:0.951;0.904, JPT:0.948;0.855 FUNCTIONAL_SNP rs4952398 chr2 42288769 Intergenic 6 11848 CEU:1.0;0.918, JPT:1.0;0.648 FUNCTIONAL_SNP rs4952400 chr2 42289122 Intergenic 6 12201 CEU:1.0;0.918, JPT:1.0;0.68 FUNCTIONAL_SNP rs12464469 chr2 42260443 Intergenic 6 16478 CEU:1.0;0.913, CHB:0.939;0.791, JPT:0.945;0.847 FUNCTIONAL_SNP rs4468862 chr2 42265846 Intergenic 6 11075 CEU:1.0;0.918, CHB:0.951;0.904, JPT:0.948;0.855 FUNCTIONAL_SNP rs2289410 chr2 42284110 Intron 7 7189 CEU:1.0;0.913, CHB:1.0;0.908, JPT:1.0;0.952 FUNCTIONAL_SNP rs4952579 chr2 42264741 Intergenic 7 12180 CEU:1.0;0.913, CHB:0.947;0.815, JPT:0.948;0.855 FUNCTIONAL_SNP rs4952580 chr2 42266740 Intergenic 7 10181 CEU:1.0;0.918, CHB:0.951;0.904, JPT:0.948;0.855 FUNCTIONAL_SNP rs4952581 chr2 42268444 Intergenic 7 8477 CEU:1.0;0.918, CHB:0.951;0.904, JPT:0.948;0.855 FUNCTIONAL_SNP rs4952582 chr2 42268672 Intergenic 7 8249 CEU:1.0;0.913, CHB:0.946;0.894, JPT:0.945;0.849 FUNCTIONAL_SNP rs4952583 chr2 42268688 Intergenic 7 8233 CEU:1.0;0.913, CHB:0.948;0.899, JPT:0.943;0.843 FUNCTIONAL_SNP rs4952584 chr2 42269287 Intergenic 7 7634 CEU:1.0;0.918, CHB:0.951;0.904, JPT:0.948;0.855 FUNCTIONAL_SNP rs4952586 chr2 42269752 Intergenic 7 7169 CEU:1.0;0.918, CHB:0.951;0.904, JPT:0.948;0.855 FUNCTIONAL_SNP rs12472427 chr2 42260479 Intergenic 7 16442 CEU:1.0;0.889, CHB:0.935;0.821, JPT:0.945;0.893 FUNCTIONAL_SNP rs13431578 chr2 42264301 Intergenic 7 12620 CEU:1.0;0.913, CHB:0.949;0.901, JPT:0.946;0.849 FUNCTIONAL_SNP rs12473667 chr2 42261871 Intergenic 7 15050 CEU:1.0;0.918, CHB:0.951;0.904, JPT:0.948;0.855 FUNCTIONAL_SNP rs1550430 chr2 42227952 Intergenic 7 48969 CEU:1.0;0.918, CHB:0.921;0.503, JPT:0.931;0.604 FUNCTIONAL_SNP rs13384444 chr2 42265449 Intergenic 7 11472 CEU:1.0;0.913, CHB:0.951;0.904, JPT:0.948;0.855 FUNCTIONAL_SNP rs10173801 chr2 42262132 Intergenic 7 14789 CEU:1.0;0.918, CHB:0.949;0.901, JPT:0.943;0.843 FUNCTIONAL_SNP rs12472429 chr2 42260495 Intergenic 7 16426 CEU:1.0;0.906, CHB:0.932;0.728, JPT:0.94;0.884 FUNCTIONAL_SNP rs13384309 chr2 42265288 Intergenic 7 11633 CEU:1.0;0.913, CHB:0.948;0.899, JPT:0.948;0.855 FUNCTIONAL_SNP rs4952566 chr2 42253458 Intergenic 7 23463 CEU:1.0;0.918, CHB:1.0;0.812, JPT:0.946;0.809 FUNCTIONAL_SNP rs4952572 chr2 42263392 Intergenic 7 13529 CEU:1.0;0.918, CHB:0.949;0.901, JPT:0.948;0.855 LEAD_SNP rs930421 chr2 42981239 Exon,non-coding 5b ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.22184874962 MTA3 - OXER1 LEAD_SNP rs6719977 chr2 42985803 Intergenic 7 ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.69897000434 MTA3 - OXER1 LEAD_SNP rs7590268 chr2 43540125 Intron 3a ASSOCIATION 20023658 Nonsyndromic cleft lip with or without cleft palate 7.04575749056 THADA FUNCTIONAL_SNP rs7596480 chr2 43621162 Intron 5a 81037 CEU:1.0;0.858, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs6544656 chr2 43635143 Intron 5b 95018 CEU:1.0;0.902, CHB:1.0;1.0, JPT:1.0;0.584 FUNCTIONAL_SNP rs13035011 chr2 43544117 Intron 7 3992 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;0.632 FUNCTIONAL_SNP rs6729902 chr2 43576968 Intron 7 36843 CEU:0.943;0.889, CHB:1.0;1.0, JPT:1.0;0.79, YRI:0.796;0.5 FUNCTIONAL_SNP rs7600177 chr2 43628055 Intron 7 87930 CEU:1.0;0.902, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs17334310 chr2 43577615 Intron 7 37490 CEU:0.946;0.849, CHB:1.0;1.0, JPT:1.0;0.79, YRI:0.811;0.501 FUNCTIONAL_SNP rs2046916 chr2 43686207 Intron 7 146082 CEU:0.944;0.844, CHB:1.0;1.0, JPT:1.0;0.79, YRI:1.0;0.632 FUNCTIONAL_SNP rs10445925 chr2 43670144 Intron 7 130019 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;0.79, YRI:0.937;0.67 LEAD_SNP rs1465618 chr2 43553949 Intron 6 ASSOCIATION 19767753 Prostate cancer 7.69897000434 THADA FUNCTIONAL_SNP rs4340576 chr2 43555506 Intron 4 1557 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.802;0.545, YRI:1.0;1.0 FUNCTIONAL_SNP rs6714624 chr2 43537711 Intron 6 16238 CEU:1.0;0.842 LEAD_SNP rs6732426 chr2 43587504 Intron 4 ASSOCIATION 19896111 Hair morphology 7.0 THADA FUNCTIONAL_SNP rs3901678 chr2 43587451 Intron 4 53 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.686 LEAD_SNP rs13429458 chr2 43638838 Intron 5b ASSOCIATION 21151128 Polycystic ovary syndrome 22.6989700043 THADA LEAD_SNP rs12478601 chr2 43721508 Intron 5a ASSOCIATION 21151128 Polycystic ovary syndrome 22.5228787453 THADA FUNCTIONAL_SNP rs1472100 chr2 43791363 Exon,non-coding 3a 69855 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;0.88 FUNCTIONAL_SNP rs999949 chr2 43709366 Intron 4 12142 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.934 FUNCTIONAL_SNP rs7559891 chr2 43767039 Intron 4 45531 CEU:1.0;0.96, CHB:1.0;0.95, JPT:1.0;0.847, YRI:1.0;0.829 FUNCTIONAL_SNP rs6544661 chr2 43711925 Intron 5a 9583 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.9, YRI:1.0;1.0 LEAD_SNP rs7578597 chr2 43732823 Coding 6 ASSOCIATION 18372903 Type 2 diabetes 9.0 THADA LEAD_SNP rs10495903 chr2 43806918 Intron 5b ASSOCIATION 21102463 Crohn's disease 13.6989700043 THADA FUNCTIONAL_SNP rs17031095 chr2 43819139 Coding 6 12221 CEU:1.0;0.879 FUNCTIONAL_SNP rs10186307 chr2 43839896 Intergenic 4 32978 CEU:1.0;0.879 FUNCTIONAL_SNP rs7568901 chr2 43814984 Intron 5a 8066 CEU:1.0;0.879 FUNCTIONAL_SNP rs17031133 chr2 43844833 Intergenic 5a 37915 CEU:1.0;0.879, YRI:0.928;0.573 FUNCTIONAL_SNP rs7559723 chr2 43832049 Intergenic 5b 25131 CEU:1.0;0.879 FUNCTIONAL_SNP rs11901680 chr2 43850357 Intergenic 5b 43439 CEU:1.0;0.879 FUNCTIONAL_SNP rs6717791 chr2 43822006 Intron 5b 15088 CEU:1.0;0.879 FUNCTIONAL_SNP rs12469695 chr2 43833258 Intergenic 5b 26340 CEU:1.0;0.879 FUNCTIONAL_SNP rs6712944 chr2 43834118 Intergenic 6 27200 CEU:1.0;0.848 FUNCTIONAL_SNP rs11889803 chr2 43850031 Intergenic 6 43113 CEU:1.0;0.879 FUNCTIONAL_SNP rs10186441 chr2 43840048 Intergenic 6 33130 CEU:1.0;0.879 FUNCTIONAL_SNP rs12474102 chr2 43835570 Intergenic 6 28652 CEU:1.0;0.879 FUNCTIONAL_SNP rs6759383 chr2 43805228 Intron 6 1690 CEU:1.0;0.878 FUNCTIONAL_SNP rs4339008 chr2 43834352 Intergenic 6 27434 CEU:1.0;0.879 FUNCTIONAL_SNP rs12463527 chr2 43815945 Intron 6 9027 CEU:1.0;0.879 FUNCTIONAL_SNP rs7602701 chr2 43841119 Intergenic 7 34201 CEU:1.0;0.879 FUNCTIONAL_SNP rs17031088 chr2 43807090 Intron 7 172 CEU:1.0;0.866 FUNCTIONAL_SNP rs6725688 chr2 43846553 Intergenic 7 39635 CEU:1.0;0.879, YRI:0.928;0.573 FUNCTIONAL_SNP rs12471904 chr2 43840673 Intergenic 7 33755 CEU:1.0;0.879 FUNCTIONAL_SNP rs6715003 chr2 43808659 Intron 7 1741 CEU:1.0;0.879 FUNCTIONAL_SNP rs12473987 chr2 43812180 Intron 7 5262 CEU:1.0;0.879 FUNCTIONAL_SNP rs12474030 chr2 43812317 Intron 7 5399 CEU:1.0;0.879 FUNCTIONAL_SNP rs12467420 chr2 43831150 Intergenic 7 24232 CEU:1.0;0.879 FUNCTIONAL_SNP rs6726404 chr2 43834163 Intergenic 7 27245 CEU:1.0;0.879 FUNCTIONAL_SNP rs11904361 chr2 43848664 Intergenic 7 41746 CEU:1.0;0.879 FUNCTIONAL_SNP rs6731636 chr2 43843046 Intergenic 7 36128 CEU:1.0;0.879 FUNCTIONAL_SNP rs11889544 chr2 43849406 Intergenic 7 42488 CEU:1.0;1.0 FUNCTIONAL_SNP rs7576643 chr2 43841269 Intergenic 7 34351 CEU:1.0;0.879 FUNCTIONAL_SNP rs17031092 chr2 43809248 Intron 7 2330 CEU:1.0;0.879 FUNCTIONAL_SNP rs17031106 chr2 43829056 Intergenic 7 22138 CEU:1.0;0.878 FUNCTIONAL_SNP rs17031116 chr2 43833013 Intergenic 7 26095 CEU:1.0;0.879 FUNCTIONAL_SNP rs17031079 chr2 43804933 Intron 7 1985 CEU:1.0;0.879 LEAD_SNP rs6756629 chr2 44065090 Coding 7 ASSOCIATION 19060911 Cholesterol, total 10.6989700043 ABCG5;ABCG8 ASSOCIATION 19060911 LDL cholesterol 9.52287874528 ABCG5;ABCG8 FUNCTIONAL_SNP rs4953023 chr2 44074000 Intron 6 8910 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 LEAD_SNP rs11887534 chr2 44066247 Coding 4 ASSOCIATION 17632509 Gallstones 14.0 ABCG5;ABCG8 LEAD_SNP rs41360247 chr2 44073656 Intron 7 ASSOCIATION 20529992 Serum phytosterol levels 24.2218487496 ABCG8 FUNCTIONAL_SNP rs11887534 chr2 44066247 Coding 4 7409 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6756629 chr2 44065090 Coding 7 8566 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs4953023 chr2 44074000 Intron 6 344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.585 LEAD_SNP rs6544713 chr2 44073881 Intron 7 ASSOCIATION 19060906 LDL cholesterol 19.6989700043 ABCG8 LEAD_SNP rs4245791 chr2 44074431 Intron 7 ASSOCIATION 20529992 Serum phytosterol levels 49.6989700043 ABCG8 FUNCTIONAL_SNP rs6544713 chr2 44073881 Intron 7 550 CEU:1.0;1.0, YRI:1.0;0.653 FUNCTIONAL_SNP rs4299376 chr2 44072576 Intron 7 1855 CEU:1.0;1.0, YRI:1.0;0.586 LEAD_SNP rs3213787 chr2 45646824 Intron 7 ASSOCIATION 20363506 Glaucoma 8.52287874528 SRBD1 LEAD_SNP rs10495928 chr2 46353166 Intron 7 ASSOCIATION 20139978 Hematological and biochemical traits 7.39794000867 PRKCE ASSOCIATION 19862010 Hemoglobin 12.15490196 PRKCE FUNCTIONAL_SNP rs10168349 chr2 46360907 Intron 6 7741 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs4953318 chr2 46355051 Intron 7 1885 CEU:1.0;1.0, CHB:1.0;0.697, JPT:1.0;0.707 LEAD_SNP rs10168349 chr2 46360907 Intron 6 ASSOCIATION 19862010 Hematocrit 14.3979400087 PRKCE FUNCTIONAL_SNP rs10495928 chr2 46353166 Intron 7 7741 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs4953318 chr2 46355051 Intron 7 5856 CEU:1.0;1.0, CHB:1.0;0.657, JPT:1.0;0.746 LEAD_SNP rs7579899 chr2 46537604 Intron 5b ASSOCIATION 21131975 Renal cell carcinoma 8.69897000434 EPAS1 FUNCTIONAL_SNP rs11125068 chr2 46527816 Intron 2b 9788 CEU:0.956;0.914 FUNCTIONAL_SNP rs1867785 chr2 46534338 Intron 3a 3266 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs2121266 chr2 46535924 Intron 3a 1680 CEU:1.0;0.957, CHB:1.0;0.518 FUNCTIONAL_SNP rs1867787 chr2 46525391 Intron 4 12213 CEU:0.956;0.914 FUNCTIONAL_SNP rs11684885 chr2 46533552 Intron 4 4052 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs10211665 chr2 46526096 Intron 4 11508 CEU:1.0;0.956, CHB:1.0;0.886, JPT:0.743;0.552 FUNCTIONAL_SNP rs11894252 chr2 46533376 Intron 6 4228 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs11689011 chr2 46541176 Intron 7 3572 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.942;0.66 LEAD_SNP rs12623288 chr2 46634645 Intergenic 7 ASSOCIATION 19896111 Hair morphology 5.52287874528 EPAS1 - ATP6V1E2 LEAD_SNP rs2346177 chr2 46642249 Intergenic 6 ASSOCIATION 21347282 Coronary heart disease 5.69897000434 EPAS1 - ATP6V1E2 LEAD_SNP rs17818399 chr2 46826026 Intron 6 ASSOCIATION 20966902 Height 6.52287874528 PIGF LEAD_SNP rs76351433 chr2 47022543 Intergenic 7 ASSOCIATION 21685187 Chronic obstructive pulmonary disease 6.69897000434 SOCS5 - MCFD2 LEAD_SNP rs17540621 chr2 47229839 Intron 5b ASSOCIATION 20339536 Response to statin therapy 5.69897000434 TTC7A FUNCTIONAL_SNP rs10196993 chr2 47240485 Intron 5b 10646 CEU:1.0;1.0 FUNCTIONAL_SNP rs10194115 chr2 47240012 Intron 5b 10173 CEU:1.0;1.0 FUNCTIONAL_SNP rs10193261 chr2 47239142 Intron 5b 9303 CEU:1.0;1.0 FUNCTIONAL_SNP rs17481147 chr2 47223437 Intron 7 6402 CEU:1.0;1.0 LEAD_SNP rs10194115 chr2 47240012 Intron 5b ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 6.30102999566 TTC7A LEAD_SNP rs815815 chr2 47399064 Intron 4 ASSOCIATION 21546767 Dialysis-related mortality 6.15490195999 CALM2 FUNCTIONAL_SNP rs1723484 chr2 47399975 Intron 6 911 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.912 FUNCTIONAL_SNP rs815816 chr2 47398394 Intron 7 670 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.912 LEAD_SNP rs6544997 chr2 47844505 Intergenic 5b ASSOCIATION 19890347 Vitiligo 5.15490195999 KCNK12 - RPL18AP6 LEAD_SNP rs77155169 chr2 48011616 Intron 5b ASSOCIATION 21685187 Chronic obstructive pulmonary disease 6.69897000434 MSH6 LEAD_SNP rs13405728 chr2 48978159 Intron 7 ASSOCIATION 21151128 Polycystic ovary syndrome 20.096910013 LHCGR LEAD_SNP rs7591064 chr2 49177601 Intergenic 7 ASSOCIATION 20923822 Radiation response 5.30102999566 LHCGR - FSHR LEAD_SNP rs2268363 chr2 49201328 Intron 7 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 7.30102999566 FSHR LEAD_SNP rs17039212 chr2 49955497 Intergenic 7 ASSOCIATION 19165918 Systemic lupus erythematosus 5.04575749056 FSHR - RPL7P13 FUNCTIONAL_SNP rs1159704 chr2 49946134 Intergenic 6 9363 CEU:1.0;0.913, CHB:1.0;0.857, JPT:1.0;0.935, YRI:1.0;0.854 LEAD_SNP rs1356888 chr2 50516018 Intron 7 ASSOCIATION 20834067 Longevity 6.0 NRXN1 FUNCTIONAL_SNP rs1520526 chr2 50514746 Intron 6 1272 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1356886 chr2 50515928 Intron 7 90 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10176705 chr2 50744774 Intron 7 ASSOCIATION 20691247 Personality dimensions 5.04575749056 NRXN1 LEAD_SNP rs1160297 chr2 53237320 Intergenic 7 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 6.0 CRYGGP - ASB3 LEAD_SNP rs2357013 chr2 53266129 Intergenic 7 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.22184874962 CRYGGP - ASB3 FUNCTIONAL_SNP rs12053291 chr2 53265185 Intergenic 6 944 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2048310 chr2 53225842 Intergenic 7 40287 CEU:1.0;0.816, CHB:1.0;0.83, JPT:1.0;0.826, YRI:1.0;1.0 LEAD_SNP rs1559040 chr2 54347750 Intron 7 ASSOCIATION 21658281 Sudden cardiac arrest 7.39794000867 ACYP2 FUNCTIONAL_SNP rs13418039 chr2 54320251 Intergenic 2b 27499 CEU:1.0;1.0 FUNCTIONAL_SNP rs10169648 chr2 54331117 Intergenic 4 16633 CEU:1.0;0.913 FUNCTIONAL_SNP rs10176406 chr2 54333348 Intergenic 6 14402 CEU:1.0;0.913 FUNCTIONAL_SNP rs7586592 chr2 54372197 Intron 6 24447 CEU:1.0;0.913, YRI:0.9;0.542 FUNCTIONAL_SNP rs10208690 chr2 54293920 Intron 7 53830 CEU:1.0;0.838 FUNCTIONAL_SNP rs10176342 chr2 54333078 Intergenic 7 14672 CEU:1.0;0.913 FUNCTIONAL_SNP rs10166363 chr2 54330242 Intergenic 7 17508 CEU:1.0;0.913 FUNCTIONAL_SNP rs10172916 chr2 54328968 Intergenic 7 18782 CEU:1.0;0.913 FUNCTIONAL_SNP rs1559039 chr2 54347832 Intron 7 82 CEU:1.0;1.0 LEAD_SNP rs11898505 chr2 54684557 Intron 2b ASSOCIATION 19801982 Bone mineral density (spine) 7.69897000434 SPTBN1 ASSOCIATION 19079262 Bone mineral density (spine) 5.39794000867 SPTBN1 ASSOCIATION 18445777 Bone mineral density (spine) 6.09691001301 SPTBN1 FUNCTIONAL_SNP rs6734097 chr2 54651933 Intergenic 3a 32624 CEU:0.952;0.865 FUNCTIONAL_SNP rs6752877 chr2 54661569 Intergenic 5b 22988 CEU:0.958;0.917 FUNCTIONAL_SNP rs7607093 chr2 54659174 Intergenic 7 25383 CEU:0.955;0.838 LEAD_SNP rs6726292 chr2 55156630 Intron 7 ASSOCIATION 19553259 Obesity (extreme) 6.0 EML6 FUNCTIONAL_SNP rs4399760 chr2 55157492 Intron 7 862 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7577894 chr2 56008904 Intergenic 4 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 6.0 PNPT1 - EFEMP1 FUNCTIONAL_SNP rs1430198 chr2 56002404 Intergenic 5b 6500 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs7560508 chr2 56002372 Intergenic 5b 6532 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs6742316 chr2 56003988 Intergenic 6 4916 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs6723918 chr2 56004139 Intergenic 6 4765 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 LEAD_SNP rs3791679 chr2 56096892 Intron 2b ASSOCIATION 20189936 Height 8.22184874962 EFEMP1 ASSOCIATION 18391951 Height 10.2218487496 EFEMP1 LEAD_SNP rs3791675 chr2 56111309 Intron 6 ASSOCIATION 20397748 Height 6.52287874528 EFEMP1 ASSOCIATION 19893584 Height 5.39794000867 EFEMP1 ASSOCIATION 19396169 Height 8.69897000434 EFEMP1 ASSOCIATION 18391952 Height 11.6989700043 EFEMP1 FUNCTIONAL_SNP rs3791679 chr2 56096892 Intron 2b 14417 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.884, YRI:1.0;0.743 FUNCTIONAL_SNP rs1346789 chr2 56092052 Intergenic 5b 19257 CEU:1.0;0.95, CHB:1.0;0.935, JPT:0.929;0.76, YRI:1.0;0.743 FUNCTIONAL_SNP rs12615158 chr2 56032999 Intergenic 5b 78310 CEU:1.0;0.859 FUNCTIONAL_SNP rs12464737 chr2 56029838 Intergenic 6 81471 CEU:1.0;0.951, CHB:1.0;0.745, JPT:1.0;0.723 FUNCTIONAL_SNP rs4146922 chr2 56067182 Intergenic 6 44127 CEU:0.95;0.903, CHB:1.0;0.788, JPT:1.0;0.775, YRI:1.0;0.743 FUNCTIONAL_SNP rs7563032 chr2 56068441 Intergenic 7 42868 CEU:0.95;0.903, CHB:1.0;0.745, JPT:1.0;0.775, YRI:1.0;0.743 FUNCTIONAL_SNP rs1946545 chr2 56036435 Intergenic 7 74874 CEU:1.0;0.951, CHB:1.0;0.745, JPT:1.0;0.723 FUNCTIONAL_SNP rs10496051 chr2 56034335 Intergenic 7 76974 CEU:1.0;0.951, CHB:1.0;0.745, JPT:1.0;0.723, YRI:1.0;0.743 FUNCTIONAL_SNP rs10496052 chr2 56010473 Intergenic 7 100836 CEU:0.95;0.859, CHB:0.781;0.57, JPT:0.841;0.549 FUNCTIONAL_SNP rs1430202 chr2 56072501 Intergenic 7 38808 CEU:1.0;0.947, CHB:1.0;0.638, JPT:1.0;0.808, YRI:1.0;0.743 FUNCTIONAL_SNP rs7591694 chr2 56072109 Intergenic 7 39200 CEU:1.0;0.944, CHB:1.0;0.745, JPT:1.0;0.775, YRI:1.0;0.743 FUNCTIONAL_SNP rs6730839 chr2 56048107 Intergenic 7 63202 CEU:1.0;0.904, CHB:1.0;0.745, JPT:1.0;0.713 FUNCTIONAL_SNP rs1346786 chr2 56108333 Intron 7 2976 CEU:1.0;0.828, JPT:1.0;0.673 FUNCTIONAL_SNP rs7560657 chr2 56032652 Intergenic 7 78657 CEU:1.0;0.951, CHB:1.0;0.745, JPT:1.0;0.723 FUNCTIONAL_SNP rs4146921 chr2 56067484 Intergenic 7 43825 CEU:0.95;0.903, CHB:1.0;0.745, JPT:1.0;0.775, YRI:1.0;0.743 LEAD_SNP rs6751715 chr2 56363377 Intergenic 7 ASSOCIATION 20041166 HIV-1 control 6.0 EFEMP1 - CCDC85A FUNCTIONAL_SNP rs3850355 chr2 56370879 Intergenic 4 7502 CEU:0.959;0.885, CHB:1.0;0.931, JPT:1.0;1.0 FUNCTIONAL_SNP rs1432554 chr2 56359237 Intergenic 6 4140 CEU:1.0;0.882, CHB:1.0;0.703, JPT:1.0;0.729 FUNCTIONAL_SNP rs17268570 chr2 56361582 Intergenic 7 1795 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.64, YRI:0.95;0.729 LEAD_SNP rs17268785 chr2 56592083 Intron 6 ASSOCIATION 21102462 Menarche (age at onset) 10.0 CCDC85A FUNCTIONAL_SNP rs6760269 chr2 56571508 Intron 5a 20575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.754 FUNCTIONAL_SNP rs17047851 chr2 56596654 Intron 5b 4571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6748308 chr2 56568755 Intron 6 23328 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.754 FUNCTIONAL_SNP rs10200604 chr2 56575020 Intron 6 17063 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.919;0.611 FUNCTIONAL_SNP rs6545572 chr2 56581563 Intron 6 10520 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs6747380 chr2 56587749 Intron 6 4334 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs4672110 chr2 56576447 Intron 6 15636 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.673 FUNCTIONAL_SNP rs7562381 chr2 56582387 Intron 7 9696 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs17047854 chr2 56598309 Intron 7 6226 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6735003 chr2 56581160 Intron 7 10923 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs6545574 chr2 56590564 Intron 7 1519 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6704684 chr2 56596394 Intron 7 4311 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2312147 chr2 58222928 Intron 6 ASSOCIATION 19571808 Schizophrenia 6.52287874528 EIF2S2P7 - VRK2 FUNCTIONAL_SNP rs2678903 chr2 58137930 Intron 3a 84998 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs2678905 chr2 58135872 Intron 5a 87056 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs2683629 chr2 58037369 Intergenic 5a 185559 CEU:1.0;0.854, CHB:0.807;0.614, JPT:0.936;0.779 FUNCTIONAL_SNP rs1518395 chr2 58208074 Intron 5a 14854 CEU:1.0;0.961, CHB:1.0;0.835, JPT:1.0;0.941 FUNCTIONAL_SNP rs986512 chr2 58275666 Intron 5a 52738 CEU:1.0;0.817, CHB:0.919;0.545, JPT:0.934;0.733, YRI:1.0;0.792 FUNCTIONAL_SNP rs1040224 chr2 58139865 Intron 5b 83063 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs2678906 chr2 58134048 Intergenic 5b 88880 CEU:0.959;0.883, CHB:0.937;0.828, JPT:1.0;1.0 FUNCTIONAL_SNP rs10188070 chr2 58299326 Intron 5b 76398 CEU:1.0;0.821, CHB:0.873;0.72, JPT:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs2465804 chr2 58148180 Intron 6 74748 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs2678870 chr2 58153375 Intron 6 69553 CEU:0.921;0.848, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs1474215 chr2 58032029 Intergenic 6 190899 CEU:1.0;0.854, CHB:0.807;0.614, JPT:0.934;0.733 FUNCTIONAL_SNP rs970941 chr2 58166181 Intron 6 56747 CEU:0.904;0.817, CHB:0.931;0.814, JPT:1.0;1.0 FUNCTIONAL_SNP rs2953439 chr2 58039357 Intergenic 6 183571 CEU:1.0;0.854, CHB:0.807;0.614, JPT:0.936;0.779 FUNCTIONAL_SNP rs2683634 chr2 58113995 Intergenic 6 108933 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;0.941 FUNCTIONAL_SNP rs1356545 chr2 58123798 Intergenic 6 99130 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;0.941 FUNCTIONAL_SNP rs1401100 chr2 58168856 Intron 6 54072 CEU:0.96;0.885, CHB:0.873;0.72, JPT:1.0;1.0 FUNCTIONAL_SNP rs6545677 chr2 58211509 Intron 6 11419 CEU:1.0;0.924, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2717002 chr2 58142647 Intron 6 80281 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717006 chr2 58146956 Intron 6 75972 CEU:1.0;0.961, CHB:0.941;0.886, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717036 chr2 58168098 Intron 6 54830 CEU:0.919;0.845, CHB:0.873;0.72, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717071 chr2 58030962 Intergenic 6 191966 CEU:1.0;0.854, CHB:0.807;0.614, JPT:0.934;0.733 FUNCTIONAL_SNP rs2717075 chr2 58032530 Intergenic 6 190398 CEU:1.0;0.854, CHB:0.807;0.614, JPT:0.934;0.733 FUNCTIONAL_SNP rs2683615 chr2 58027493 Intergenic 6 195435 CEU:1.0;0.854, CHB:0.786;0.546, JPT:0.933;0.731 FUNCTIONAL_SNP rs6545664 chr2 58023134 Intergenic 7 199794 CEU:1.0;0.851, CHB:0.794;0.56, JPT:0.933;0.731 FUNCTIONAL_SNP rs6732310 chr2 58210239 Intron 7 12689 CEU:1.0;0.961, CHB:0.941;0.886, JPT:1.0;1.0 FUNCTIONAL_SNP rs1402399 chr2 58045395 Intergenic 7 177533 CEU:0.956;0.811, CHB:0.809;0.654, JPT:0.936;0.779 FUNCTIONAL_SNP rs7598169 chr2 58040729 Intergenic 7 182199 CEU:1.0;0.854, CHB:0.804;0.61, JPT:0.931;0.767 FUNCTIONAL_SNP rs2678880 chr2 58158283 Intron 7 64645 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs2678889 chr2 58164223 Intron 7 58705 CEU:0.921;0.848, CHB:0.873;0.72, JPT:1.0;1.0 FUNCTIONAL_SNP rs2678897 chr2 58169418 Intron 7 53510 CEU:0.921;0.848, CHB:0.934;0.775, JPT:1.0;1.0 FUNCTIONAL_SNP rs2678901 chr2 58138651 Intron 7 84277 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs2678908 chr2 58130327 Intergenic 7 92601 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs2678910 chr2 58112266 Intergenic 7 110662 CEU:1.0;0.961, CHB:0.93;0.721, JPT:1.0;0.829 FUNCTIONAL_SNP rs2683616 chr2 58035555 Intergenic 7 187373 CEU:1.0;0.854, CHB:0.807;0.614, JPT:0.934;0.733 FUNCTIONAL_SNP rs954593 chr2 58027337 Intergenic 7 195591 CEU:1.0;0.854, CHB:0.794;0.56, JPT:0.934;0.733 FUNCTIONAL_SNP rs2683620 chr2 58032553 Intergenic 7 190375 CEU:1.0;0.854, CHB:0.799;0.601, JPT:0.933;0.731 FUNCTIONAL_SNP rs2953441 chr2 58041482 Intergenic 7 181446 CEU:1.0;0.854, CHB:0.807;0.614, JPT:0.934;0.733 FUNCTIONAL_SNP rs2683628 chr2 58036044 Intergenic 7 186884 CEU:1.0;0.854, CHB:0.807;0.614, JPT:0.934;0.733 FUNCTIONAL_SNP rs6545663 chr2 58023009 Intergenic 7 199919 CEU:1.0;0.854, CHB:0.792;0.556, JPT:0.93;0.763 FUNCTIONAL_SNP rs1356544 chr2 58123724 Intergenic 7 99204 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;0.941 FUNCTIONAL_SNP rs2683614 chr2 58026312 Intergenic 7 196616 CEU:1.0;0.854, CHB:0.794;0.56, JPT:0.934;0.733 FUNCTIONAL_SNP rs1518399 chr2 58231314 Intron 7 8386 CEU:0.957;0.844, CHB:0.941;0.886, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717001 chr2 58137618 Intron 7 85310 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717004 chr2 58143854 Intron 7 79074 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717018 chr2 58035491 Intergenic 7 187437 CEU:1.0;0.854, CHB:0.807;0.614, JPT:0.934;0.733 FUNCTIONAL_SNP rs2717019 chr2 58159473 Intron 7 63455 CEU:0.921;0.848, CHB:0.941;0.886, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717023 chr2 58161355 Intron 7 61573 CEU:0.921;0.848, CHB:0.873;0.72, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717024 chr2 58161397 Intron 7 61531 CEU:0.921;0.848, CHB:0.934;0.775, JPT:1.0;1.0 FUNCTIONAL_SNP rs1040225 chr2 58139593 Intron 7 83335 CEU:0.96;0.885, CHB:0.939;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717031 chr2 58166468 Intron 7 56460 CEU:0.921;0.848, CHB:0.873;0.72, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717040 chr2 58169494 Intron 7 53434 CEU:0.96;0.885, CHB:0.873;0.72, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717043 chr2 58179019 Intron 7 43909 CEU:0.961;0.923, CHB:0.941;0.886, JPT:1.0;1.0 FUNCTIONAL_SNP rs2717048 chr2 58025937 Intergenic 7 196991 CEU:1.0;0.854, CHB:0.794;0.56, JPT:0.934;0.733 FUNCTIONAL_SNP rs2717052 chr2 58047263 Intergenic 7 175665 CEU:1.0;0.86, CHB:0.756;0.531, JPT:0.917;0.684 FUNCTIONAL_SNP rs2717054 chr2 58046683 Intergenic 7 176245 CEU:1.0;0.845, CHB:0.772;0.557, JPT:0.924;0.703 FUNCTIONAL_SNP rs2717055 chr2 58044220 Intergenic 7 178708 CEU:1.0;0.854, CHB:0.804;0.61, JPT:0.934;0.733 FUNCTIONAL_SNP rs2717063 chr2 58110969 Intergenic 7 111959 CEU:0.958;0.815, CHB:0.935;0.74, JPT:0.932;0.691 FUNCTIONAL_SNP rs2717068 chr2 58094873 Intergenic 7 128055 CEU:1.0;0.961, CHB:0.805;0.579, JPT:0.874;0.72 FUNCTIONAL_SNP rs2717076 chr2 58061127 Intergenic 7 161801 CEU:1.0;0.854, CHB:0.811;0.622, JPT:1.0;0.841 FUNCTIONAL_SNP rs12713370 chr2 58200748 Intron 7 22180 CEU:1.0;0.961, CHB:1.0;0.835, JPT:1.0;0.941, YRI:1.0;0.534 FUNCTIONAL_SNP rs1568253 chr2 58170004 Intron 7 52924 CEU:0.921;0.848, CHB:0.873;0.72, JPT:1.0;1.0 LEAD_SNP rs17552189 chr2 59072969 Intron 7 ASSOCIATION 21668797 Cannabis dependence 5.39794000867 EIF3FP3 - BCL11A LEAD_SNP rs991964 chr2 59282591 Intron 7 ASSOCIATION 21460842 Uterine fibroids 5.04575749056 EIF3FP3 - BCL11A FUNCTIONAL_SNP rs995990 chr2 59281636 Intron 7 955 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4552176 chr2 59282948 Intron 7 357 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs887912 chr2 59302877 Intergenic 6 ASSOCIATION 20935630 Body mass index 11.6989700043 EIF3FP3 - BCL11A FUNCTIONAL_SNP rs763712 chr2 59311911 Intergenic 5a 9034 CEU:1.0;1.0 FUNCTIONAL_SNP rs6545714 chr2 59307725 Intergenic 5a 4848 CEU:1.0;0.801 FUNCTIONAL_SNP rs980183 chr2 59311536 Intergenic 5a 8659 CEU:1.0;0.801 FUNCTIONAL_SNP rs4671331 chr2 59312675 Intergenic 6 9798 CEU:1.0;0.801 FUNCTIONAL_SNP rs7599151 chr2 59308101 Intergenic 6 5224 CEU:1.0;0.801 FUNCTIONAL_SNP rs759250 chr2 59329153 Intergenic 6 26276 CEU:1.0;1.0 FUNCTIONAL_SNP rs2192497 chr2 59310048 Intergenic 7 7171 CEU:1.0;0.957 FUNCTIONAL_SNP rs7575523 chr2 59335104 Intergenic 7 32227 CEU:1.0;0.801 FUNCTIONAL_SNP rs1016287 chr2 59305625 Intergenic 7 2748 CEU:1.0;0.954 LEAD_SNP rs10490113 chr2 59499347 Intron 7 ASSOCIATION 17903305 Breast cancer 5.30102999566 EIF3FP3 - BCL11A LEAD_SNP rs6712720 chr2 60281608 Intergenic 7 ASSOCIATION 21493818 Monocyte early outgrowth colony forming units 5.39794000867 EIF3FP3 - BCL11A LEAD_SNP rs10202231 chr2 60500144 Intergenic 5b ASSOCIATION 20195266 Response to antipsychotic treatment 6.15490195999 EIF3FP3 - BCL11A FUNCTIONAL_SNP rs10174891 chr2 60490927 Intergenic 6 9217 CEU:0.958;0.846, CHB:1.0;0.627, JPT:1.0;0.822 FUNCTIONAL_SNP rs4672374 chr2 60493062 Intergenic 6 7082 CEU:0.958;0.846, CHB:1.0;0.627, JPT:1.0;0.863 FUNCTIONAL_SNP rs4671383 chr2 60497294 Intergenic 7 2850 CEU:0.958;0.846, CHB:1.0;0.627, JPT:1.0;0.863 FUNCTIONAL_SNP rs7598252 chr2 60517299 Intergenic 7 17155 CEU:0.958;0.848, CHB:0.84;0.642 FUNCTIONAL_SNP rs7598522 chr2 60517506 Intergenic 7 17362 CEU:0.957;0.813, CHB:0.817;0.526 FUNCTIONAL_SNP rs4672377 chr2 60494510 Intergenic 7 5634 CEU:0.958;0.846, CHB:1.0;0.627, JPT:1.0;0.863 FUNCTIONAL_SNP rs4672378 chr2 60501857 Intergenic 7 1713 CEU:1.0;0.923, CHB:1.0;0.627, JPT:1.0;0.863 LEAD_SNP rs243021 chr2 60584819 Intergenic 7 ASSOCIATION 20581827 Type 2 diabetes 14.5228787453 EIF3FP3 - BCL11A FUNCTIONAL_SNP rs243018 chr2 60586707 Exon,non-coding 7 1888 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.943 FUNCTIONAL_SNP rs243091 chr2 60565568 Intergenic 5a 19251 CEU:1.0;1.0, CHB:0.886;0.643, JPT:0.936;0.78 FUNCTIONAL_SNP rs243019 chr2 60585806 Intergenic 5b 987 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.861 FUNCTIONAL_SNP rs243083 chr2 60573870 Intergenic 6 10949 CEU:1.0;1.0, CHB:0.89;0.683, JPT:0.938;0.829 FUNCTIONAL_SNP rs243085 chr2 60572671 Intergenic 6 12148 CEU:1.0;1.0, CHB:0.89;0.683, JPT:0.938;0.829 FUNCTIONAL_SNP rs243088 chr2 60568745 Intergenic 6 16074 CEU:1.0;1.0, CHB:0.886;0.643, JPT:0.938;0.829 FUNCTIONAL_SNP rs243020 chr2 60585028 Intergenic 6 209 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.859 FUNCTIONAL_SNP rs243090 chr2 60565979 Intergenic 7 18840 CEU:1.0;1.0, CHB:0.886;0.643, JPT:0.936;0.78 LEAD_SNP rs2540917 chr2 60608759 Intron 7 ASSOCIATION 19862010 Mean corpuscular volume 14.0 EIF3FP3 - BCL11A FUNCTIONAL_SNP rs925484 chr2 60611437 Intron 2c 2678 CEU:1.0;0.962, YRI:1.0;1.0 FUNCTIONAL_SNP rs13027161 chr2 60607728 Intron 4 1031 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs925483 chr2 60611285 Intron 5a 2526 CEU:1.0;0.96, YRI:1.0;1.0 FUNCTIONAL_SNP rs888082 chr2 60629609 Intergenic 5a 20850 CEU:0.957;0.812 FUNCTIONAL_SNP rs243078 chr2 60615303 Intron 5b 6544 CEU:1.0;0.852 FUNCTIONAL_SNP rs243081 chr2 60613776 Intron 5b 5017 CEU:1.0;0.852 FUNCTIONAL_SNP rs10445937 chr2 60637656 Intergenic 5b 28897 CEU:0.959;0.92 FUNCTIONAL_SNP rs2137281 chr2 60612008 Intron 5b 3249 CEU:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs12476132 chr2 60639904 Intergenic 5b 31145 CEU:0.961;0.923 FUNCTIONAL_SNP rs243066 chr2 60621766 Intergenic 5b 13007 CEU:1.0;0.962, YRI:1.0;1.0 FUNCTIONAL_SNP rs243067 chr2 60621643 Intergenic 5b 12884 CEU:1.0;1.0 FUNCTIONAL_SNP rs243027 chr2 60607007 Intron 6 1752 CEU:0.959;0.92 FUNCTIONAL_SNP rs9967849 chr2 60609474 Intron 6 715 CEU:1.0;0.962 FUNCTIONAL_SNP rs2540913 chr2 60610812 Intron 6 2053 CEU:0.959;0.92, YRI:1.0;0.611 FUNCTIONAL_SNP rs243076 chr2 60617563 Intron 7 8804 CEU:1.0;0.962 FUNCTIONAL_SNP rs243080 chr2 60614572 Intron 7 5813 CEU:1.0;0.926 FUNCTIONAL_SNP rs1553934 chr2 60609896 Intron 7 1137 CEU:1.0;0.96, YRI:1.0;1.0 FUNCTIONAL_SNP rs2668729 chr2 60608383 Intron 7 376 CEU:0.962;0.925 FUNCTIONAL_SNP rs173373 chr2 60605919 Intron 7 2840 CEU:1.0;0.962 FUNCTIONAL_SNP rs2244030 chr2 60612238 Intron 7 3479 CEU:1.0;0.843 FUNCTIONAL_SNP rs13009393 chr2 60633364 Intergenic 7 24605 CEU:1.0;0.96 FUNCTIONAL_SNP rs2137283 chr2 60612457 Intron 7 3698 CEU:1.0;1.0, YRI:1.0;0.611 FUNCTIONAL_SNP rs12464462 chr2 60636416 Intergenic 7 27657 CEU:1.0;0.962 FUNCTIONAL_SNP rs243029 chr2 60606654 Intron 7 2105 CEU:1.0;0.962 FUNCTIONAL_SNP rs243030 chr2 60606571 Intron 7 2188 CEU:1.0;0.962 FUNCTIONAL_SNP rs243032 chr2 60603950 Intron 7 4809 CEU:1.0;0.96 FUNCTIONAL_SNP rs13011022 chr2 60626822 Intergenic 7 18063 CEU:1.0;0.96 FUNCTIONAL_SNP rs2540916 chr2 60608930 Intron 7 171 CEU:0.962;0.925 FUNCTIONAL_SNP rs243063 chr2 60622899 Intergenic 7 14140 CEU:1.0;0.962 FUNCTIONAL_SNP rs243065 chr2 60622064 Intergenic 7 13305 CEU:0.957;0.812 LEAD_SNP rs1427407 chr2 60718043 Intron 5a ASSOCIATION 17767159 F-cell distribution 30.2218487496 BCL11A LEAD_SNP rs766432 chr2 60719970 Intron 5b ASSOCIATION 20183929 Beta thalassemia/hemoglobin E disease 10.0 BCL11A FUNCTIONAL_SNP rs4671393 chr2 60720951 Intron 5b 981 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11886868 chr2 60720246 Intron 7 ASSOCIATION 18245381 Fetal hemoglobin levels 34.15490196 BCL11A FUNCTIONAL_SNP rs7584113 chr2 60721311 Intron 5b 1065 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs7557939 chr2 60721347 Intron 5b 1101 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs10195871 chr2 60720589 Intron 7 343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs1896294 chr2 60719074 Intron 7 1172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs10172646 chr2 60720757 Intron 7 511 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 LEAD_SNP rs1432295 chr2 61066666 Intergenic 4 ASSOCIATION 21037568 Hodgkin's lymphoma 7.69897000434 PAPOLG - RPL21P33 FUNCTIONAL_SNP rs6545832 chr2 61059383 Intergenic 5a 7283 CEU:1.0;0.854, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs5013203 chr2 61054623 Intergenic 5a 12043 CEU:0.958;0.849, JPT:1.0;1.0, YRI:1.0;0.784 LEAD_SNP rs702873 chr2 61081542 Intron 7 ASSOCIATION 20953190 Psoriasis 8.39794000867 RPL21P33 - REL FUNCTIONAL_SNP rs1177205 chr2 61075111 Exon,non-coding 5a 6431 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;0.924, YRI:1.0;0.889 FUNCTIONAL_SNP rs1177206 chr2 61075189 Exon,non-coding 4 6353 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.536 FUNCTIONAL_SNP rs1177207 chr2 61075209 Exon,non-coding 3a 6333 CEU:1.0;1.0, CHB:1.0;0.915, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs750027 chr2 61075987 Exon,non-coding 7 5555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.945 FUNCTIONAL_SNP rs1177212 chr2 61078940 Intron 5b 2602 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs842625 chr2 61080482 Intron 5b 1060 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs842636 chr2 61091950 Intron 5b 10408 CEU:1.0;0.889, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs4672409 chr2 61071302 Intergenic 5b 10240 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.567 FUNCTIONAL_SNP rs1177211 chr2 61078350 Intron 6 3192 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1432297 chr2 61070652 Intergenic 6 10890 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.583 FUNCTIONAL_SNP rs842627 chr2 61082660 Intron 6 1118 CEU:0.961;0.923, CHB:1.0;0.92, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs842631 chr2 61085723 Intron 6 4181 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.637 FUNCTIONAL_SNP rs4672410 chr2 61071656 Intergenic 6 9886 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.583 FUNCTIONAL_SNP rs1177202 chr2 61074576 Intergenic 7 6966 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs842626 chr2 61081184 Intron 7 358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs842636 chr2 61091950 Intron 5b ASSOCIATION 20953189 Psoriasis 5.22184874962 RPL21P33 - REL FUNCTIONAL_SNP rs1177206 chr2 61075189 Exon,non-coding 4 16761 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs842631 chr2 61085723 Intron 6 6227 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.805 LEAD_SNP rs13031237 chr2 61136129 Intron 7 ASSOCIATION 20453842 Rheumatoid arthritis 6.09691001301 REL FUNCTIONAL_SNP rs13017599 chr2 61164331 Intergenic 5b 28202 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs34695944 chr2 61124850 Intron 6 11279 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13026755 chr2 61160619 Intergenic 6 24490 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13019590 chr2 61099420 Intron 6 36709 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs13017599 chr2 61164331 Intergenic 5b ASSOCIATION 19503088 Rheumatoid arthritis 11.6989700043 REL - RPS12P3 LEAD_SNP rs13003464 chr2 61186829 Intron 5b ASSOCIATION 20228799 Ulcerative colitis 8.15490195999 PUS10 ASSOCIATION 20190752 Celiac disease 12.3979400087 PUS10 FUNCTIONAL_SNP rs7608910 chr2 61204856 Intron 6 18027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.585 FUNCTIONAL_SNP rs4560096 chr2 61204917 Intron 7 18088 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.585 LEAD_SNP rs7608910 chr2 61204856 Intron 6 ASSOCIATION 21297633 Ulcerative colitis 13.6989700043 PUS10 FUNCTIONAL_SNP rs13003464 chr2 61186829 Intron 5b 18027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.585 FUNCTIONAL_SNP rs4560096 chr2 61204917 Intron 7 61 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10188217 chr2 61217542 Intron 7 ASSOCIATION 21298027 Crohn's disease and Celiac disease 11.0 PUS10 FUNCTIONAL_SNP rs10207958 chr2 61225330 Intron 6 7788 CEU:1.0;0.854, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7585642 chr2 61212547 Intron 6 4995 CEU:0.961;0.923, CHB:1.0;1.0, JPT:1.0;0.585, YRI:1.0;1.0 FUNCTIONAL_SNP rs9309332 chr2 61216165 Intron 7 1377 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10181042 chr2 61224259 Intron 6 ASSOCIATION 21102463 Crohn's disease 8.15490195999 PUS10 FUNCTIONAL_SNP rs10207958 chr2 61225330 Intron 6 1071 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;0.585, YRI:1.0;1.0 LEAD_SNP rs6545883 chr2 61772257 Intergenic 6 ASSOCIATION 20694014 Tuberculosis 5.30102999566 XPO1 - RPS29P10 FUNCTIONAL_SNP rs7563678 chr2 61741811 Intron 5a 30446 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.862 FUNCTIONAL_SNP rs12713438 chr2 61725501 Intron 6 46756 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:0.96;0.824 LEAD_SNP rs10865331 chr2 62551472 Intergenic 7 ASSOCIATION 21743469 Ankylosing spondylitis 33.15490196 B3GNT2 - TMEM17 ASSOCIATION 20062062 Ankylosing spondylitis 18.6989700043 B3GNT2 - TMEM17 FUNCTIONAL_SNP rs4672505 chr2 62560332 Intergenic 2b 8860 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4672507 chr2 62570573 Intergenic 3a 19101 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;0.694 FUNCTIONAL_SNP rs13024541 chr2 62555737 Intergenic 5a 4265 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs11679753 chr2 62552321 Intergenic 5b 849 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6759003 chr2 62559205 Intergenic 6 7733 CEU:1.0;1.0, CHB:1.0;0.86, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs721048 chr2 63131731 Intron 5b ASSOCIATION 18264098 Prostate cancer 8.09691001301 EHBP1 LEAD_SNP rs6545977 chr2 63301164 Intergenic 7 ASSOCIATION 19767753 Prostate cancer 6.30102999566 OTX1 - RPL27P5 LEAD_SNP rs11683229 chr2 63596836 Intron 7 ASSOCIATION 18464913 Protein quantitative trait loci 5.22184874962 C2orf86 LEAD_SNP rs7604693 chr2 64349202 Intron 7 ASSOCIATION 21221998 Kawasaki disease 5.69897000434 PELI1 LEAD_SNP rs934734 chr2 65595586 Intron 7 ASSOCIATION 20453842 Rheumatoid arthritis 9.30102999566 SPRED2 FUNCTIONAL_SNP rs1866051 chr2 65602149 Intron 3a 6563 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17534670 chr2 65615428 Intron 4 19842 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs702875 chr2 65614197 Intron 5a 18611 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6711791 chr2 65579228 Intron 5b 16358 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.722, YRI:0.95;0.629 LEAD_SNP rs1876518 chr2 65608909 Intron 4 ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 7.69897000434 SPRED2 FUNCTIONAL_SNP rs174847 chr2 65605194 Exon,non-coding 4 3715 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs268139 chr2 65606991 Intron 3a 1918 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs198478 chr2 65607011 Intron 4 1898 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs268122 chr2 65602109 Intron 4 6800 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.927 FUNCTIONAL_SNP rs268131 chr2 65610471 Intron 4 1562 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs268132 chr2 65609677 Intron 4 768 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7559283 chr2 65578368 Intron 4 30541 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;0.722 FUNCTIONAL_SNP rs2661797 chr2 65633190 Intron 5a 24281 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.825 FUNCTIONAL_SNP rs11689314 chr2 65605408 Intron 5a 3501 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs268138 chr2 65607294 Intron 5a 1615 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.722, YRI:1.0;1.0 FUNCTIONAL_SNP rs10186240 chr2 65577651 Intron 5b 31258 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.722 FUNCTIONAL_SNP rs2661794 chr2 65639543 Intron 5b 30634 CEU:1.0;0.918, CHB:1.0;0.642, JPT:1.0;0.788 FUNCTIONAL_SNP rs6738087 chr2 65592325 Intron 5b 16584 CEU:1.0;0.918, CHB:1.0;0.924, JPT:1.0;0.722 FUNCTIONAL_SNP rs1194849 chr2 65606653 Intron 5b 2256 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2661798 chr2 65635688 Intron 5b 26779 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs268136 chr2 65607543 Intron 5b 1366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1396210 chr2 65584274 Intron 5b 24635 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.722 FUNCTIONAL_SNP rs4303705 chr2 65619710 Intron 6 10801 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1039764 chr2 65614613 Intron 7 5704 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs2661796 chr2 65627406 Intron 7 18497 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0 FUNCTIONAL_SNP rs7581149 chr2 65559641 Intron 7 49268 CEU:0.956;0.876, CHB:1.0;1.0, JPT:1.0;0.722 FUNCTIONAL_SNP rs2271198 chr2 65559027 Intron 7 49882 CEU:0.915;0.836, CHB:0.918;0.842, JPT:1.0;0.722 LEAD_SNP rs1457451 chr2 65862378 Intron 7 ASSOCIATION 19084217 Serum markers of iron status 5.52287874528 LOC100131818 LEAD_SNP rs11897119 chr2 66772000 Intron 7 ASSOCIATION 20062060 PR interval 10.3010299957 MEIS1 FUNCTIONAL_SNP rs11677371 chr2 66756413 Intron 4 15587 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.946;0.532 FUNCTIONAL_SNP rs3891585 chr2 66756976 Intron 5b 15024 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.91;0.635 FUNCTIONAL_SNP rs997153 chr2 66771047 Intron 5b 953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4544423 chr2 66750017 Intron 5b 21983 CEU:1.0;0.96, CHB:0.929;0.863, JPT:0.935;0.822 FUNCTIONAL_SNP rs2300481 chr2 66782467 Intron 5b 10467 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs4433986 chr2 66760311 Intron 5b 11689 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.946;0.532 FUNCTIONAL_SNP rs10865355 chr2 66764997 Intron 6 7003 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.91;0.635 FUNCTIONAL_SNP rs10188003 chr2 66773469 Intron 6 1469 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3772026 chr2 66779866 Intron 6 7866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs13029520 chr2 66772962 Intron 7 962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10194077 chr2 66771863 Intron 7 137 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17625694 chr2 66768583 Intron 7 3417 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.547 FUNCTIONAL_SNP rs4430933 chr2 66749610 Intron 7 22390 CEU:1.0;0.961, CHB:0.929;0.863, JPT:0.938;0.829 FUNCTIONAL_SNP rs7603236 chr2 66762411 Intron 7 9589 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942, YRI:0.904;0.62 FUNCTIONAL_SNP rs4316926 chr2 66749108 Intron 7 22892 CEU:1.0;0.96, CHB:0.929;0.863, JPT:0.938;0.829 LEAD_SNP rs2300478 chr2 66781453 Intron 5b ASSOCIATION 17637780 Restless legs syndrome 27.5228787453 MEIS1 LEAD_SNP rs724568 chr2 67942480 Intergenic 7 ASSOCIATION 20038947 Major depressive disorder (broad) 5.30102999566 ETAA1 - C1D LEAD_SNP rs9309413 chr2 68570772 Intergenic 7 ASSOCIATION 19043545 Serum metabolites 8.69897000434 CNRIP1 - PLEK FUNCTIONAL_SNP rs4277504 chr2 68569566 Intergenic 5a 1206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6759864 chr2 68571153 Intergenic 5b 381 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs964585 chr2 68572434 Intergenic 5b 1662 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs964586 chr2 68572897 Intergenic 5b 2125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs964587 chr2 68572911 Intergenic 5b 2139 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7589952 chr2 68570091 Intergenic 6 681 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs736779 chr2 68571919 Intergenic 7 1147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7560374 chr2 68569988 Intergenic 7 784 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.914 FUNCTIONAL_SNP rs6546377 chr2 68570223 Intergenic 7 549 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.827 FUNCTIONAL_SNP rs9309411 chr2 68570461 Intergenic 7 311 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9309412 chr2 68570564 Intergenic 7 208 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17035378 chr2 68598955 Intron 3a ASSOCIATION 20190752 Celiac disease 8.09691001301 PLEK FUNCTIONAL_SNP rs3816281 chr2 68607947 Coding 6 8992 CEU:1.0;0.856, CHB:1.0;0.749, JPT:1.0;0.785 FUNCTIONAL_SNP rs17035355 chr2 68589322 Exon,non-coding 2b 9633 CEU:1.0;0.856, CHB:1.0;0.71, JPT:1.0;0.741, YRI:1.0;0.565 FUNCTIONAL_SNP rs1373199 chr2 68595680 Intron 4 3275 CEU:1.0;0.856, CHB:1.0;0.749, JPT:1.0;0.785, YRI:1.0;0.565 FUNCTIONAL_SNP rs17035374 chr2 68596501 Intron 4 2454 CEU:1.0;0.856, CHB:1.0;0.747, JPT:1.0;0.785 FUNCTIONAL_SNP rs17035375 chr2 68598903 Intron 4 52 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2120334 chr2 68616085 Intron 4 17130 CEU:1.0;0.856, CHB:1.0;0.749, JPT:1.0;0.785 FUNCTIONAL_SNP rs3770650 chr2 68616438 Intron 4 17483 CEU:1.0;0.856, CHB:1.0;0.749, JPT:1.0;0.831 FUNCTIONAL_SNP rs3770648 chr2 68619392 Intron 5a 20437 CEU:1.0;0.856, CHB:1.0;0.749, JPT:1.0;0.785 FUNCTIONAL_SNP rs4854435 chr2 68639717 Intergenic 5a 40762 CEU:1.0;0.856, CHB:1.0;0.749, JPT:1.0;0.785, YRI:1.0;0.6 FUNCTIONAL_SNP rs10167650 chr2 68645560 Intergenic 5a 46605 CEU:0.945;0.806, CHB:1.0;0.887, JPT:1.0;0.772 FUNCTIONAL_SNP rs11688096 chr2 68596042 Intron 5b 2913 CEU:1.0;0.856, CHB:1.0;0.749, JPT:1.0;0.785 FUNCTIONAL_SNP rs9309415 chr2 68605335 Intron 6 6380 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.944;0.564 FUNCTIONAL_SNP rs10210193 chr2 68603530 Intron 6 4575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.941;0.549 FUNCTIONAL_SNP rs2289688 chr2 68620463 Intron 7 21508 CEU:1.0;0.856, CHB:1.0;0.749, JPT:1.0;0.785 FUNCTIONAL_SNP rs2289689 chr2 68620151 Intron 7 21196 CEU:1.0;0.856, CHB:1.0;0.749, JPT:1.0;0.785 FUNCTIONAL_SNP rs10496164 chr2 68610120 Intron 7 11165 CEU:1.0;0.856, CHB:1.0;0.749, JPT:1.0;0.785 FUNCTIONAL_SNP rs7424172 chr2 68632383 Intergenic 7 33428 CEU:1.0;0.856, CHB:0.934;0.818, JPT:1.0;0.785 FUNCTIONAL_SNP rs7355584 chr2 68598289 Intron 7 666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7595717 chr2 68587477 Intergenic 7 11478 CEU:0.946;0.808, CHB:1.0;0.71, JPT:1.0;0.741, YRI:1.0;0.565 FUNCTIONAL_SNP rs4671912 chr2 68602258 Intron 7 3303 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.609 LEAD_SNP rs10496166 chr2 69063909 Exon,non-coding 7 ASSOCIATION 20031603 RR interval (heart rate) 5.39794000867 ARHGAP25 - BMP10 FUNCTIONAL_SNP rs3749133 chr2 69062338 Exon,non-coding 7 1571 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;0.795 FUNCTIONAL_SNP rs2271836 chr2 69060158 Exon,non-coding 5b 3751 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.734 FUNCTIONAL_SNP rs2311422 chr2 69064431 Intron 4 522 CEU:1.0;0.862, CHB:1.0;0.51 FUNCTIONAL_SNP rs11691917 chr2 69034986 Intron 5b 28923 CEU:1.0;0.811, JPT:0.798;0.509 FUNCTIONAL_SNP rs17035964 chr2 69035029 Intron 5b 28880 CEU:1.0;0.82 FUNCTIONAL_SNP rs11891985 chr2 69036013 Intron 6 27896 CEU:1.0;0.82 FUNCTIONAL_SNP rs17035954 chr2 69034249 Intron 6 29660 CEU:1.0;0.82 FUNCTIONAL_SNP rs17035975 chr2 69036201 Intron 7 27708 CEU:1.0;0.82 FUNCTIONAL_SNP rs17545593 chr2 69054428 Intergenic 7 9481 CEU:1.0;0.862 LEAD_SNP rs4254535 chr2 69198388 Intergenic 6 ASSOCIATION 19654303 Lung cancer 5.30102999566 GKN2 - GKN1 FUNCTIONAL_SNP rs7600199 chr2 69199396 Intergenic 5b 1008 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11695768 chr2 69195554 Intergenic 5b 2834 CEU:1.0;0.953, CHB:0.944;0.89, JPT:1.0;0.759 LEAD_SNP rs7577851 chr2 69723710 Intron 7 ASSOCIATION 19772629 Parkinson's disease (age of onset) 5.04575749056 AAK1 FUNCTIONAL_SNP rs6546523 chr2 69708367 Exon,non-coding 7 15343 CEU:1.0;0.805 FUNCTIONAL_SNP rs2312205 chr2 69704941 Intron 5b 18769 CEU:1.0;0.805, CHB:1.0;0.669, JPT:1.0;0.613 FUNCTIONAL_SNP rs11688141 chr2 69704970 Intron 5b 18740 CEU:1.0;0.805 FUNCTIONAL_SNP rs12476268 chr2 69722616 Intron 6 1094 CEU:1.0;0.926 FUNCTIONAL_SNP rs7583591 chr2 69705886 Intron 7 17824 CEU:1.0;0.805 FUNCTIONAL_SNP rs7569000 chr2 69717385 Intron 7 6325 CEU:1.0;0.805 FUNCTIONAL_SNP rs7582735 chr2 69705286 Intron 7 18424 CEU:1.0;0.805 LEAD_SNP rs454305 chr2 70736219 Intron 5b ASSOCIATION 21507922 Neutrophil count 5.30102999566 TGFA LEAD_SNP rs432203 chr2 70764688 Intron 7 ASSOCIATION 20834067 Longevity 6.0 TGFA LEAD_SNP rs2900976 chr2 71958480 Intergenic 7 ASSOCIATION 18464913 Protein quantitative trait loci 6.0 DYSF - RPS20P10 FUNCTIONAL_SNP rs13018971 chr2 71956471 Intergenic 5a 2009 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs4417739 chr2 71958303 Intergenic 6 177 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.935 LEAD_SNP rs13538 chr2 73868328 Coding 5b ASSOCIATION 20383146 Chronic kidney disease 13.3010299957 NAT8 FUNCTIONAL_SNP rs1052162 chr2 73829372 Coding 6 38956 CEU:1.0;0.943 FUNCTIONAL_SNP rs10193972 chr2 73717656 Coding 6 150672 CEU:1.0;0.943 FUNCTIONAL_SNP rs6724782 chr2 73679990 Coding 7 188338 CEU:1.0;0.944 FUNCTIONAL_SNP rs10496192 chr2 73679866 Coding 7 188462 CEU:1.0;0.834 FUNCTIONAL_SNP rs11884776 chr2 73746923 Coding 6 121405 CEU:1.0;0.887, YRI:0.879;0.743 FUNCTIONAL_SNP rs2056486 chr2 73717567 Coding 7 150761 CEU:1.0;0.943 FUNCTIONAL_SNP rs6546836 chr2 73677833 Coding 7 190495 CEU:1.0;0.832 FUNCTIONAL_SNP rs6546837 chr2 73677898 Coding 6 190430 CEU:1.0;0.944 FUNCTIONAL_SNP rs6546838 chr2 73679280 Coding 7 189048 CEU:1.0;0.943 FUNCTIONAL_SNP rs6546839 chr2 73680508 Coding 7 187820 CEU:1.0;0.944 FUNCTIONAL_SNP rs6546858 chr2 73838613 Intergenic 2b 29715 CEU:1.0;1.0 FUNCTIONAL_SNP rs6726694 chr2 73847230 Intergenic 4 21098 CEU:1.0;0.939 FUNCTIONAL_SNP rs6546847 chr2 73785358 Intron 5a 82970 CEU:1.0;1.0 FUNCTIONAL_SNP rs6759452 chr2 73878352 Intron 5b 10024 CEU:1.0;0.887 FUNCTIONAL_SNP rs11689588 chr2 73773691 Intron 5b 94637 CEU:1.0;1.0 FUNCTIONAL_SNP rs10496193 chr2 73773503 Intron 5b 94825 CEU:1.0;0.944 FUNCTIONAL_SNP rs6546856 chr2 73837751 Intergenic 5b 30577 CEU:1.0;0.945 FUNCTIONAL_SNP rs13410232 chr2 73871689 Intergenic 5b 3361 CEU:1.0;1.0 FUNCTIONAL_SNP rs10207220 chr2 73785046 Intron 5b 83282 CEU:1.0;0.944, YRI:0.962;0.776 FUNCTIONAL_SNP rs7583255 chr2 73797996 Intron 6 70332 CEU:1.0;1.0, YRI:0.962;0.776 FUNCTIONAL_SNP rs6735946 chr2 73790058 Intron 6 78270 CEU:1.0;1.0, YRI:0.951;0.823 FUNCTIONAL_SNP rs9807961 chr2 73694043 Intron 6 174285 CEU:1.0;0.943 FUNCTIONAL_SNP rs7594511 chr2 73681639 Intron 6 186689 CEU:1.0;0.944, YRI:0.961;0.772 FUNCTIONAL_SNP rs13427832 chr2 73844818 Intergenic 6 23510 CEU:1.0;0.939 FUNCTIONAL_SNP rs13391552 chr2 73818936 Intron 6 49392 CEU:1.0;0.887, YRI:1.0;0.893 FUNCTIONAL_SNP rs7586463 chr2 73798476 Intron 6 69852 CEU:1.0;0.944, YRI:0.962;0.776 FUNCTIONAL_SNP rs9653557 chr2 73795962 Intron 6 72366 CEU:1.0;0.944, YRI:0.962;0.776 FUNCTIONAL_SNP rs6710438 chr2 73820108 Intron 6 48220 CEU:1.0;0.943, YRI:1.0;0.893 FUNCTIONAL_SNP rs10199224 chr2 73761446 Intron 6 106882 CEU:1.0;0.884, YRI:0.958;0.758 FUNCTIONAL_SNP rs10496191 chr2 73673798 Intron 6 194530 CEU:0.941;0.836 FUNCTIONAL_SNP rs13392691 chr2 73748980 Intron 6 119348 CEU:1.0;0.888 FUNCTIONAL_SNP rs3738848 chr2 73761881 Intron 6 106447 CEU:1.0;0.943 FUNCTIONAL_SNP rs7607014 chr2 73730174 Intron 6 138154 CEU:1.0;0.943, YRI:0.834;0.599 FUNCTIONAL_SNP rs7572722 chr2 73724675 Intron 6 143653 CEU:1.0;0.944, YRI:0.961;0.772 FUNCTIONAL_SNP rs13384952 chr2 73723959 Intron 6 144369 CEU:1.0;0.943 FUNCTIONAL_SNP rs13432605 chr2 73810981 Intron 6 57347 CEU:1.0;0.944, YRI:1.0;0.901 FUNCTIONAL_SNP rs9309473 chr2 73743982 Intron 6 124346 CEU:1.0;1.0, YRI:0.964;0.867 FUNCTIONAL_SNP rs2421555 chr2 73816955 Intron 6 51373 CEU:1.0;0.943 FUNCTIONAL_SNP rs1589576 chr2 73738804 Intron 6 129524 CEU:1.0;0.882 FUNCTIONAL_SNP rs10185080 chr2 73797507 Intron 6 70821 CEU:1.0;0.888, YRI:0.96;0.767 FUNCTIONAL_SNP rs13421462 chr2 73719875 Intron 6 148453 CEU:1.0;0.944, YRI:0.891;0.74 FUNCTIONAL_SNP rs6745480 chr2 73840055 Intergenic 6 28273 CEU:1.0;1.0 FUNCTIONAL_SNP rs1403284 chr2 73726662 Intron 6 141666 CEU:1.0;0.943 FUNCTIONAL_SNP rs6546851 chr2 73833283 Intron 6 35045 CEU:1.0;0.883 FUNCTIONAL_SNP rs6546853 chr2 73833739 Intron 6 34589 CEU:1.0;1.0 FUNCTIONAL_SNP rs6546860 chr2 73844249 Intergenic 6 24079 CEU:1.0;1.0 FUNCTIONAL_SNP rs7603647 chr2 73817238 Intron 6 51090 CEU:1.0;0.888, YRI:1.0;0.901 FUNCTIONAL_SNP rs10197755 chr2 73797623 Intron 6 70705 CEU:1.0;0.888, YRI:0.962;0.776 FUNCTIONAL_SNP rs17009149 chr2 73790368 Intron 6 77960 CEU:1.0;1.0, YRI:0.895;0.773 FUNCTIONAL_SNP rs17009159 chr2 73797762 Intron 7 70566 CEU:1.0;0.944, YRI:0.962;0.776 FUNCTIONAL_SNP rs13398956 chr2 73720258 Intron 7 148070 CEU:1.0;0.944, YRI:0.962;0.776 FUNCTIONAL_SNP rs6756885 chr2 73805172 Intron 7 63156 CEU:1.0;1.0, YRI:1.0;0.553 FUNCTIONAL_SNP rs7566385 chr2 73756817 Intron 7 111511 CEU:1.0;0.832 FUNCTIONAL_SNP rs10469966 chr2 73752368 Intron 7 115960 CEU:0.942;0.839 FUNCTIONAL_SNP rs7607892 chr2 73818707 Intron 7 49621 CEU:1.0;0.882, YRI:0.961;0.856 FUNCTIONAL_SNP rs10173534 chr2 73813432 Intron 7 54896 CEU:1.0;0.944, YRI:0.964;0.867 FUNCTIONAL_SNP rs6756987 chr2 73687077 Intron 7 181251 CEU:1.0;0.944 FUNCTIONAL_SNP rs10198549 chr2 73794404 Intron 7 73924 CEU:1.0;1.0, YRI:0.958;0.76 FUNCTIONAL_SNP rs11126404 chr2 73796924 Intron 7 71404 CEU:1.0;0.944 FUNCTIONAL_SNP rs6704782 chr2 73766454 Intron 7 101874 CEU:0.943;0.888, YRI:0.961;0.829 FUNCTIONAL_SNP rs10206899 chr2 73900900 Intron 7 32572 CEU:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs7604682 chr2 73788026 Intron 7 80302 CEU:1.0;0.944 FUNCTIONAL_SNP rs10175180 chr2 73673123 Intron 7 195205 CEU:1.0;1.0 FUNCTIONAL_SNP rs6711033 chr2 73746643 Intron 7 121685 CEU:1.0;1.0, YRI:0.915;0.608 FUNCTIONAL_SNP rs10186501 chr2 73697844 Intron 7 170484 CEU:1.0;0.943 FUNCTIONAL_SNP rs10189574 chr2 73698518 Intron 7 169810 CEU:1.0;0.943 FUNCTIONAL_SNP rs1114380 chr2 73804708 Intron 7 63620 CEU:1.0;0.943, YRI:1.0;0.797 FUNCTIONAL_SNP rs6745368 chr2 73809974 Intron 7 58354 CEU:1.0;0.944, YRI:0.964;0.867 FUNCTIONAL_SNP rs6740766 chr2 73780913 Intron 7 87415 CEU:1.0;1.0, YRI:0.962;0.776 FUNCTIONAL_SNP rs7558944 chr2 73810909 Intron 7 57419 CEU:1.0;1.0, YRI:0.959;0.852 FUNCTIONAL_SNP rs6705977 chr2 73849170 Intergenic 7 19158 CEU:1.0;1.0 FUNCTIONAL_SNP rs2421577 chr2 73840998 Intergenic 7 27330 CEU:1.0;0.883 FUNCTIONAL_SNP rs7598419 chr2 73798223 Intron 7 70105 CEU:1.0;0.944 FUNCTIONAL_SNP rs11901272 chr2 73720444 Intron 7 147884 CEU:1.0;0.944 FUNCTIONAL_SNP rs11679594 chr2 73779507 Intron 7 88821 CEU:1.0;0.835 FUNCTIONAL_SNP rs10169714 chr2 73808773 Intron 7 59555 CEU:1.0;1.0, YRI:1.0;0.81 FUNCTIONAL_SNP rs10169213 chr2 73787234 Intron 7 81094 CEU:1.0;1.0, YRI:0.964;0.867 FUNCTIONAL_SNP rs10187416 chr2 73713741 Intron 7 154587 CEU:1.0;0.943 FUNCTIONAL_SNP rs6546849 chr2 73831037 Intron 7 37291 CEU:1.0;1.0 FUNCTIONAL_SNP rs6546850 chr2 73831147 Intron 7 37181 CEU:1.0;1.0 FUNCTIONAL_SNP rs6546857 chr2 73837955 Intergenic 7 30373 CEU:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs6546859 chr2 73842055 Intergenic 7 26273 CEU:1.0;1.0 FUNCTIONAL_SNP rs6707146 chr2 73749076 Intron 7 119252 CEU:1.0;0.944 FUNCTIONAL_SNP rs6546852 chr2 73833431 Intron 7 34897 CEU:1.0;1.0 FUNCTIONAL_SNP rs10170849 chr2 73747932 Intron 7 120396 CEU:1.0;0.888 FUNCTIONAL_SNP rs11674602 chr2 73723185 Intron 7 145143 CEU:1.0;0.944, YRI:0.952;0.544 LEAD_SNP rs10206899 chr2 73900900 Intron 7 ASSOCIATION 20383145 Serum creatinine 15.0 ALMS1P FUNCTIONAL_SNP rs1052162 chr2 73829372 Coding 6 71528 CEU:1.0;0.943 FUNCTIONAL_SNP rs10193972 chr2 73717656 Coding 6 183244 CEU:1.0;0.943 FUNCTIONAL_SNP rs13538 chr2 73868328 Coding 5b 32572 CEU:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs11884776 chr2 73746923 Coding 6 153977 CEU:1.0;0.887, YRI:0.874;0.681 FUNCTIONAL_SNP rs2056486 chr2 73717567 Coding 7 183333 CEU:1.0;0.943 FUNCTIONAL_SNP rs6546858 chr2 73838613 Intergenic 2b 62287 CEU:1.0;1.0 FUNCTIONAL_SNP rs6726694 chr2 73847230 Intergenic 4 53670 CEU:1.0;0.939 FUNCTIONAL_SNP rs6546847 chr2 73785358 Intron 5a 115542 CEU:1.0;1.0 FUNCTIONAL_SNP rs6759452 chr2 73878352 Intron 5b 22548 CEU:1.0;0.887 FUNCTIONAL_SNP rs11689588 chr2 73773691 Intron 5b 127209 CEU:1.0;1.0 FUNCTIONAL_SNP rs10496193 chr2 73773503 Intron 5b 127397 CEU:1.0;0.944 FUNCTIONAL_SNP rs6546856 chr2 73837751 Intergenic 5b 63149 CEU:1.0;0.945 FUNCTIONAL_SNP rs13410232 chr2 73871689 Intergenic 5b 29211 CEU:1.0;1.0 FUNCTIONAL_SNP rs10207220 chr2 73785046 Intron 5b 115854 CEU:1.0;0.944, YRI:0.889;0.712 FUNCTIONAL_SNP rs7583255 chr2 73797996 Intron 6 102904 CEU:1.0;1.0, YRI:0.889;0.712 FUNCTIONAL_SNP rs6735946 chr2 73790058 Intron 6 110842 CEU:1.0;1.0, YRI:0.859;0.738 FUNCTIONAL_SNP rs13427832 chr2 73844818 Intergenic 6 56082 CEU:1.0;0.939 FUNCTIONAL_SNP rs7586463 chr2 73798476 Intron 6 102424 CEU:1.0;0.944, YRI:0.889;0.712 FUNCTIONAL_SNP rs6710438 chr2 73820108 Intron 6 80792 CEU:1.0;0.943, YRI:0.924;0.822 FUNCTIONAL_SNP rs10199224 chr2 73761446 Intron 6 139454 CEU:1.0;0.884, YRI:0.879;0.69 FUNCTIONAL_SNP rs13391552 chr2 73818936 Intron 6 81964 CEU:1.0;0.887, YRI:0.924;0.822 FUNCTIONAL_SNP rs13392691 chr2 73748980 Intron 6 151920 CEU:1.0;0.888 FUNCTIONAL_SNP rs3738848 chr2 73761881 Intron 6 139019 CEU:1.0;0.943 FUNCTIONAL_SNP rs7607014 chr2 73730174 Intron 6 170726 CEU:1.0;0.943, YRI:0.763;0.54 FUNCTIONAL_SNP rs7572722 chr2 73724675 Intron 6 176225 CEU:1.0;0.944, YRI:0.887;0.708 FUNCTIONAL_SNP rs13384952 chr2 73723959 Intron 6 176941 CEU:1.0;0.943 FUNCTIONAL_SNP rs10197755 chr2 73797623 Intron 6 103277 CEU:1.0;0.888, YRI:0.889;0.712 FUNCTIONAL_SNP rs13432605 chr2 73810981 Intron 6 89919 CEU:1.0;0.944, YRI:0.929;0.834 FUNCTIONAL_SNP rs9309473 chr2 73743982 Intron 6 156918 CEU:1.0;1.0, YRI:0.896;0.803 FUNCTIONAL_SNP rs2421555 chr2 73816955 Intron 6 83945 CEU:1.0;0.943 FUNCTIONAL_SNP rs9653557 chr2 73795962 Intron 6 104938 CEU:1.0;0.944, YRI:0.889;0.712 FUNCTIONAL_SNP rs1589576 chr2 73738804 Intron 6 162096 CEU:1.0;0.882 FUNCTIONAL_SNP rs10185080 chr2 73797507 Intron 6 103393 CEU:1.0;0.888, YRI:0.884;0.7 FUNCTIONAL_SNP rs6745480 chr2 73840055 Intergenic 6 60845 CEU:1.0;1.0 FUNCTIONAL_SNP rs1403284 chr2 73726662 Intron 6 174238 CEU:1.0;0.943 FUNCTIONAL_SNP rs13421462 chr2 73719875 Intron 6 181025 CEU:1.0;0.944, YRI:0.888;0.686 FUNCTIONAL_SNP rs6546851 chr2 73833283 Intron 6 67617 CEU:1.0;0.883 FUNCTIONAL_SNP rs6546853 chr2 73833739 Intron 6 67161 CEU:1.0;1.0 FUNCTIONAL_SNP rs6546860 chr2 73844249 Intergenic 6 56651 CEU:1.0;1.0 FUNCTIONAL_SNP rs7603647 chr2 73817238 Intron 6 83662 CEU:1.0;0.888, YRI:0.929;0.834 FUNCTIONAL_SNP rs17009149 chr2 73790368 Intron 6 110532 CEU:1.0;1.0, YRI:0.892;0.717 FUNCTIONAL_SNP rs17009159 chr2 73797762 Intron 7 103138 CEU:1.0;0.944, YRI:0.889;0.712 FUNCTIONAL_SNP rs13398956 chr2 73720258 Intron 7 180642 CEU:1.0;0.944, YRI:0.889;0.712 FUNCTIONAL_SNP rs6756885 chr2 73805172 Intron 7 95728 CEU:1.0;1.0 FUNCTIONAL_SNP rs7566385 chr2 73756817 Intron 7 144083 CEU:1.0;0.832 FUNCTIONAL_SNP rs10469966 chr2 73752368 Intron 7 148532 CEU:0.942;0.839 FUNCTIONAL_SNP rs7607892 chr2 73818707 Intron 7 82193 CEU:1.0;0.882, YRI:0.888;0.788 FUNCTIONAL_SNP rs10173534 chr2 73813432 Intron 7 87468 CEU:1.0;0.944, YRI:0.896;0.803 FUNCTIONAL_SNP rs10198549 chr2 73794404 Intron 7 106496 CEU:1.0;1.0, YRI:0.879;0.691 FUNCTIONAL_SNP rs11126404 chr2 73796924 Intron 7 103976 CEU:1.0;0.944 FUNCTIONAL_SNP rs6704782 chr2 73766454 Intron 7 134446 CEU:0.943;0.888, YRI:0.925;0.796 FUNCTIONAL_SNP rs6707146 chr2 73749076 Intron 7 151824 CEU:1.0;0.944 FUNCTIONAL_SNP rs6711033 chr2 73746643 Intron 7 154257 CEU:1.0;1.0, YRI:0.838;0.547 FUNCTIONAL_SNP rs1114380 chr2 73804708 Intron 7 96192 CEU:1.0;0.943, YRI:0.918;0.725 FUNCTIONAL_SNP rs6745368 chr2 73809974 Intron 7 90926 CEU:1.0;0.944, YRI:0.896;0.803 FUNCTIONAL_SNP rs6740766 chr2 73780913 Intron 7 119987 CEU:1.0;1.0, YRI:0.889;0.712 FUNCTIONAL_SNP rs7558944 chr2 73810909 Intron 7 89991 CEU:1.0;1.0, YRI:0.96;0.854 FUNCTIONAL_SNP rs6705977 chr2 73849170 Intergenic 7 51730 CEU:1.0;1.0 FUNCTIONAL_SNP rs2421577 chr2 73840998 Intergenic 7 59902 CEU:1.0;0.883 FUNCTIONAL_SNP rs7598419 chr2 73798223 Intron 7 102677 CEU:1.0;0.944 FUNCTIONAL_SNP rs11901272 chr2 73720444 Intron 7 180456 CEU:1.0;0.944 FUNCTIONAL_SNP rs11679594 chr2 73779507 Intron 7 121393 CEU:1.0;0.835 FUNCTIONAL_SNP rs10169714 chr2 73808773 Intron 7 92127 CEU:1.0;1.0, YRI:0.925;0.743 FUNCTIONAL_SNP rs10169213 chr2 73787234 Intron 7 113666 CEU:1.0;1.0, YRI:0.896;0.803 FUNCTIONAL_SNP rs10187416 chr2 73713741 Intron 7 187159 CEU:1.0;0.943 FUNCTIONAL_SNP rs6546849 chr2 73831037 Intron 7 69863 CEU:1.0;1.0 FUNCTIONAL_SNP rs6546850 chr2 73831147 Intron 7 69753 CEU:1.0;1.0 FUNCTIONAL_SNP rs6546857 chr2 73837955 Intergenic 7 62945 CEU:1.0;0.945, YRI:1.0;0.934 FUNCTIONAL_SNP rs6546859 chr2 73842055 Intergenic 7 58845 CEU:1.0;1.0 FUNCTIONAL_SNP rs7604682 chr2 73788026 Intron 7 112874 CEU:1.0;0.944 FUNCTIONAL_SNP rs6546852 chr2 73833431 Intron 7 67469 CEU:1.0;1.0 FUNCTIONAL_SNP rs10170849 chr2 73747932 Intron 7 152968 CEU:1.0;0.888 FUNCTIONAL_SNP rs11674602 chr2 73723185 Intron 7 177715 CEU:1.0;0.944 LEAD_SNP rs6546886 chr2 74245777 Intergenic 7 ASSOCIATION 21546767 Dialysis-related mortality 5.52287874528 DGUOK - TET3 FUNCTIONAL_SNP rs11886928 chr2 74258529 Intergenic 4 12752 CEU:1.0;0.951, CHB:0.913;0.834, JPT:1.0;1.0, YRI:0.948;0.899 FUNCTIONAL_SNP rs6546887 chr2 74250781 Intergenic 5b 5004 CEU:1.0;0.952, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs10191539 chr2 74269926 Intergenic 6 24149 CEU:1.0;0.952, CHB:0.918;0.843, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs7601526 chr2 74278481 Intron 7 32704 CEU:1.0;0.952, CHB:1.0;0.92, JPT:1.0;1.0, YRI:0.948;0.899 LEAD_SNP rs7595103 chr2 78075244 Intergenic 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.15490195999 RPL38P2 - SNAR-H LEAD_SNP rs13409348 chr2 79539988 Intron 7 ASSOCIATION 19416921 Bipolar disorder 5.52287874528 REG3A - CTNNA2 LEAD_SNP rs399885 chr2 79687252 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.30102999566 REG3A - CTNNA2 FUNCTIONAL_SNP rs410120 chr2 79688779 Intron 5a 1527 CEU:1.0;1.0, JPT:1.0;0.565 FUNCTIONAL_SNP rs6714400 chr2 79655517 Intron 5b 31735 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs10496226 chr2 79660031 Intron 5b 27221 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs6742990 chr2 79655481 Intron 5b 31771 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs452625 chr2 79700151 Intron 6 12899 CEU:1.0;0.833, CHB:0.931;0.542, JPT:0.936;0.622 FUNCTIONAL_SNP rs12623907 chr2 79672431 Intron 6 14821 CEU:1.0;0.833, JPT:0.936;0.622, YRI:1.0;0.649 FUNCTIONAL_SNP rs7570469 chr2 79709354 Intron 6 22102 CEU:1.0;1.0, CHB:1.0;0.829, JPT:1.0;0.906 FUNCTIONAL_SNP rs1868924 chr2 79689205 Intron 6 1953 CEU:1.0;1.0, JPT:1.0;0.533 FUNCTIONAL_SNP rs6754949 chr2 79658119 Intron 6 29133 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs1986232 chr2 79649068 Intron 6 38184 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs10496224 chr2 79659440 Intron 6 27812 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs4852491 chr2 79702775 Intron 6 15523 CEU:1.0;0.833, CHB:0.931;0.542, JPT:0.936;0.622 FUNCTIONAL_SNP rs4852492 chr2 79702840 Intron 6 15588 CEU:1.0;1.0, JPT:1.0;0.566 FUNCTIONAL_SNP rs417597 chr2 79689310 Intron 6 2058 CEU:1.0;0.87 FUNCTIONAL_SNP rs11126730 chr2 79657641 Intron 6 29611 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs6751188 chr2 79657386 Intron 6 29866 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs1122268 chr2 79674460 Intron 6 12792 CEU:1.0;0.814, JPT:0.934;0.641, YRI:1.0;0.596 FUNCTIONAL_SNP rs723933 chr2 79712533 Intron 6 25281 CEU:1.0;0.829, CHB:0.925;0.516, JPT:0.936;0.622, YRI:1.0;0.527 FUNCTIONAL_SNP rs449529 chr2 79701943 Intron 6 14691 CEU:1.0;0.833, CHB:0.931;0.542, JPT:0.936;0.622 FUNCTIONAL_SNP rs2250249 chr2 79698996 Intron 7 11744 CEU:1.0;0.833, JPT:0.82;0.551 FUNCTIONAL_SNP rs449552 chr2 79702028 Intron 7 14776 CEU:1.0;0.826, CHB:0.925;0.516, JPT:0.934;0.59 FUNCTIONAL_SNP rs1451543 chr2 79669531 Intron 7 17721 CEU:1.0;0.833, CHB:0.931;0.542, JPT:0.936;0.622, YRI:1.0;0.649 FUNCTIONAL_SNP rs2902061 chr2 79707315 Intron 7 20063 CEU:1.0;1.0, CHB:1.0;0.829, JPT:1.0;0.906 FUNCTIONAL_SNP rs400482 chr2 79699805 Intron 7 12553 CEU:1.0;0.833, CHB:0.931;0.542, JPT:0.934;0.589 FUNCTIONAL_SNP rs13017219 chr2 79661850 Intron 7 25402 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs6751596 chr2 79657911 Intron 7 29341 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs445551 chr2 79697982 Intron 7 10730 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs416985 chr2 79680137 Intron 7 7115 CEU:1.0;0.829, CHB:0.929;0.534, JPT:0.934;0.615, YRI:1.0;0.637 FUNCTIONAL_SNP rs6722266 chr2 79657338 Intron 7 29914 CEU:1.0;0.842, JPT:1.0;0.533 FUNCTIONAL_SNP rs10496225 chr2 79659644 Intron 7 27608 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs10496228 chr2 79705116 Intron 7 17864 CEU:1.0;1.0, CHB:1.0;0.829, JPT:1.0;0.906 FUNCTIONAL_SNP rs7564015 chr2 79667252 Intron 7 20000 CEU:1.0;0.808, JPT:1.0;0.551 FUNCTIONAL_SNP rs17017080 chr2 79653604 Intron 7 33648 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs4458235 chr2 79710525 Intron 7 23273 CEU:1.0;0.833, JPT:1.0;0.503 FUNCTIONAL_SNP rs17017088 chr2 79655597 Intron 7 31655 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs7569668 chr2 79714377 Intron 7 27125 CEU:1.0;0.825, CHB:0.927;0.545, JPT:0.934;0.615 FUNCTIONAL_SNP rs17040656 chr2 79663355 Intron 7 23897 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs6547242 chr2 79709327 Intron 7 22075 CEU:1.0;0.833, CHB:0.931;0.542, JPT:0.936;0.622 FUNCTIONAL_SNP rs386271 chr2 79702156 Intron 7 14904 CEU:1.0;0.833, CHB:0.931;0.542, JPT:0.936;0.622 FUNCTIONAL_SNP rs993607 chr2 79671224 Intron 7 16028 CEU:1.0;0.833, JPT:0.936;0.622, YRI:1.0;0.61 FUNCTIONAL_SNP rs12616530 chr2 79705040 Intron 7 17788 CEU:1.0;1.0, CHB:1.0;0.829, JPT:1.0;0.906 FUNCTIONAL_SNP rs588259 chr2 79678151 Intron 7 9101 CEU:1.0;0.833, JPT:0.936;0.622, YRI:1.0;0.61 FUNCTIONAL_SNP rs6709617 chr2 79657984 Intron 7 29268 CEU:1.0;0.833 FUNCTIONAL_SNP rs388990 chr2 79684947 Intron 7 2305 CEU:1.0;0.833, CHB:0.931;0.542, JPT:1.0;0.676, YRI:1.0;0.61 FUNCTIONAL_SNP rs6717316 chr2 79703384 Intron 7 16132 CEU:1.0;1.0, JPT:1.0;0.503 FUNCTIONAL_SNP rs12472215 chr2 79652928 Intron 7 34324 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs12620205 chr2 79703501 Intron 7 16249 CEU:1.0;1.0, CHB:1.0;0.829, JPT:1.0;0.906 FUNCTIONAL_SNP rs1159598 chr2 79660978 Intron 7 26274 CEU:1.0;0.842, JPT:1.0;0.56 FUNCTIONAL_SNP rs442291 chr2 79676305 Intron 7 10947 CEU:1.0;0.842 FUNCTIONAL_SNP rs376763 chr2 79679931 Intron 7 7321 CEU:1.0;0.833, CHB:0.931;0.542, JPT:0.936;0.622, YRI:1.0;0.597 FUNCTIONAL_SNP rs11126727 chr2 79654435 Intron 7 32817 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs12478921 chr2 79651259 Intron 7 35993 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs11126731 chr2 79662090 Intron 7 25162 CEU:1.0;0.833, JPT:0.936;0.622 FUNCTIONAL_SNP rs13405677 chr2 79705678 Intron 7 18426 CEU:1.0;1.0, CHB:1.0;0.771, JPT:1.0;0.906 LEAD_SNP rs7570469 chr2 79709354 Intron 6 ASSOCIATION 20195266 Response to antipsychotic treatment 6.22184874962 REG3A - CTNNA2 FUNCTIONAL_SNP rs410120 chr2 79688779 Intron 5a 20575 CEU:1.0;1.0 FUNCTIONAL_SNP rs6714400 chr2 79655517 Intron 5b 53837 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs10496226 chr2 79660031 Intron 5b 49323 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs6742990 chr2 79655481 Intron 5b 53873 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs452625 chr2 79700151 Intron 6 9203 CEU:1.0;0.833, CHB:1.0;0.518, JPT:1.0;0.65 FUNCTIONAL_SNP rs12623907 chr2 79672431 Intron 6 36923 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs1868924 chr2 79689205 Intron 6 20149 CEU:1.0;1.0, JPT:0.929;0.519 FUNCTIONAL_SNP rs6754949 chr2 79658119 Intron 6 51235 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs1986232 chr2 79649068 Intron 6 60286 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs10496224 chr2 79659440 Intron 6 49914 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs4852491 chr2 79702775 Intron 6 6579 CEU:1.0;0.833, CHB:1.0;0.518, JPT:1.0;0.65 FUNCTIONAL_SNP rs4852492 chr2 79702840 Intron 6 6514 CEU:1.0;1.0, JPT:1.0;0.581 FUNCTIONAL_SNP rs417597 chr2 79689310 Intron 6 20044 CEU:1.0;0.87 FUNCTIONAL_SNP rs11126730 chr2 79657641 Intron 6 51713 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs6751188 chr2 79657386 Intron 6 51968 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs1122268 chr2 79674460 Intron 6 34894 CEU:1.0;0.814, JPT:0.934;0.614 FUNCTIONAL_SNP rs723933 chr2 79712533 Intron 6 3179 CEU:1.0;0.829, JPT:1.0;0.65 FUNCTIONAL_SNP rs449529 chr2 79701943 Intron 6 7411 CEU:1.0;0.833, CHB:1.0;0.518, JPT:1.0;0.65 FUNCTIONAL_SNP rs2250249 chr2 79698996 Intron 7 10358 CEU:1.0;0.833, JPT:0.781;0.554 FUNCTIONAL_SNP rs399885 chr2 79687252 Intron 7 22102 CEU:1.0;1.0, CHB:1.0;0.829, JPT:1.0;0.906 FUNCTIONAL_SNP rs449552 chr2 79702028 Intron 7 7326 CEU:1.0;0.826, JPT:1.0;0.62 FUNCTIONAL_SNP rs1451543 chr2 79669531 Intron 7 39823 CEU:1.0;0.833, CHB:1.0;0.518, JPT:0.934;0.567 FUNCTIONAL_SNP rs2902061 chr2 79707315 Intron 7 2039 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs400482 chr2 79699805 Intron 7 9549 CEU:1.0;0.833, CHB:1.0;0.518, JPT:1.0;0.62 FUNCTIONAL_SNP rs13017219 chr2 79661850 Intron 7 47504 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs6751596 chr2 79657911 Intron 7 51443 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs445551 chr2 79697982 Intron 7 11372 CEU:1.0;0.833, JPT:1.0;0.65 FUNCTIONAL_SNP rs416985 chr2 79680137 Intron 7 29217 CEU:1.0;0.829, CHB:1.0;0.51, JPT:0.934;0.59 FUNCTIONAL_SNP rs6722266 chr2 79657338 Intron 7 52016 CEU:1.0;0.842 FUNCTIONAL_SNP rs10496225 chr2 79659644 Intron 7 49710 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs10496228 chr2 79705116 Intron 7 4238 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs7564015 chr2 79667252 Intron 7 42102 CEU:1.0;0.808, YRI:0.844;0.713 FUNCTIONAL_SNP rs17017080 chr2 79653604 Intron 7 55750 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs4458235 chr2 79710525 Intron 7 1171 CEU:1.0;0.833, CHB:1.0;0.543, JPT:1.0;0.569, YRI:1.0;0.926 FUNCTIONAL_SNP rs17017088 chr2 79655597 Intron 7 53757 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs7569668 chr2 79714377 Intron 7 5023 CEU:1.0;0.825, CHB:1.0;0.519, JPT:1.0;0.676 FUNCTIONAL_SNP rs17040656 chr2 79663355 Intron 7 45999 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs6547242 chr2 79709327 Intron 7 27 CEU:1.0;0.833, CHB:1.0;0.518, JPT:1.0;0.65 FUNCTIONAL_SNP rs386271 chr2 79702156 Intron 7 7198 CEU:1.0;0.833, CHB:1.0;0.518, JPT:1.0;0.65 FUNCTIONAL_SNP rs993607 chr2 79671224 Intron 7 38130 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs12616530 chr2 79705040 Intron 7 4314 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs588259 chr2 79678151 Intron 7 31203 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs6709617 chr2 79657984 Intron 7 51370 CEU:1.0;0.833 FUNCTIONAL_SNP rs388990 chr2 79684947 Intron 7 24407 CEU:1.0;0.833, CHB:1.0;0.518, JPT:1.0;0.62 FUNCTIONAL_SNP rs6717316 chr2 79703384 Intron 7 5970 CEU:1.0;1.0, CHB:1.0;0.543, JPT:1.0;0.569, YRI:1.0;0.926 FUNCTIONAL_SNP rs12472215 chr2 79652928 Intron 7 56426 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs12620205 chr2 79703501 Intron 7 5853 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs1159598 chr2 79660978 Intron 7 48376 CEU:1.0;0.842 FUNCTIONAL_SNP rs442291 chr2 79676305 Intron 7 33049 CEU:1.0;0.842, YRI:0.844;0.713 FUNCTIONAL_SNP rs376763 chr2 79679931 Intron 7 29423 CEU:1.0;0.833, CHB:1.0;0.518, JPT:0.934;0.567 FUNCTIONAL_SNP rs11126727 chr2 79654435 Intron 7 54919 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs12478921 chr2 79651259 Intron 7 58095 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs11126731 chr2 79662090 Intron 7 47264 CEU:1.0;0.833, JPT:0.934;0.567 FUNCTIONAL_SNP rs13405677 chr2 79705678 Intron 7 3676 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:0.96;0.887 LEAD_SNP rs11695685 chr2 79922802 Intron 7 ASSOCIATION 18464913 Protein quantitative trait loci 6.30102999566 CTNNA2 FUNCTIONAL_SNP rs11677290 chr2 79921161 Intron 6 1641 CEU:1.0;0.955, CHB:1.0;0.949, JPT:1.0;0.945, YRI:1.0;1.0 LEAD_SNP rs10496265 chr2 81668808 Intergenic 6 ASSOCIATION 17903295 Aging traits 8.0 LRRTM1 - RPL37P10 LEAD_SNP rs10496262 chr2 81751124 Intergenic 6 ASSOCIATION 17903295 Aging traits 6.52287874528 LRRTM1 - RPL37P10 LEAD_SNP rs17022444 chr2 83029469 Intergenic 7 ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 10.0 LRRTM1 - RPL37P10 LEAD_SNP rs13398848 chr2 84245168 Intergenic 6 ASSOCIATION 20585324 Conduct disorder (case status) 5.30102999566 RPL37P10 - FUNDC2P2 FUNCTIONAL_SNP rs3887086 chr2 84217939 Intergenic 5b 27229 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs7608359 chr2 84190104 Intergenic 6 55064 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs4832365 chr2 84226912 Intergenic 6 18256 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs6714384 chr2 84228202 Intergenic 7 16966 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs13392427 chr2 84250941 Intergenic 7 5773 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs4832366 chr2 84227077 Intergenic 7 18091 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs13399167 chr2 84192275 Intergenic 7 52893 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs13417614 chr2 84250915 Intergenic 7 5747 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs7566018 chr2 84198445 Intergenic 7 46723 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.828 FUNCTIONAL_SNP rs6737097 chr2 84177187 Intergenic 7 67981 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs11904304 chr2 84247325 Intergenic 7 2157 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs6742327 chr2 84152114 Intergenic 7 93054 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs10194757 chr2 84198109 Intergenic 7 47059 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs12052840 chr2 84195490 Intergenic 7 49678 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs10168220 chr2 84243782 Intergenic 7 1386 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs10182140 chr2 84194838 Intergenic 7 50330 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.839 LEAD_SNP rs1447537 chr2 84246586 Intergenic 6 ASSOCIATION 20031603 RR interval (heart rate) 5.39794000867 RPL37P10 - FUNDC2P2 FUNCTIONAL_SNP rs763867 chr2 84217982 Intergenic 5b 28604 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7568658 chr2 84211926 Intergenic 6 34660 CEU:1.0;0.955 FUNCTIONAL_SNP rs11126938 chr2 84247221 Intergenic 7 635 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10168056 chr2 84243762 Intergenic 7 2824 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1534238 chr2 84350917 Intergenic 6 ASSOCIATION 20195266 Response to antipsychotic treatment 5.52287874528 RPL37P10 - FUNDC2P2 FUNCTIONAL_SNP rs11884424 chr2 84343393 Intergenic 5a 7524 CEU:0.961;0.923, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs12612847 chr2 84350015 Intergenic 6 902 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11885459 chr2 84349389 Intergenic 6 1528 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7562821 chr2 84340265 Intergenic 6 10652 CEU:0.96;0.921 FUNCTIONAL_SNP rs1918095 chr2 84347241 Intergenic 7 3676 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs7602538 chr2 84354577 Intergenic 7 3660 CEU:0.959;0.885, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs1526700 chr2 84345684 Intergenic 7 5233 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1526701 chr2 84348472 Intergenic 7 2445 CEU:1.0;0.889, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs1405384 chr2 84358932 Intergenic 7 8015 CEU:1.0;0.822, CHB:0.938;0.83, JPT:1.0;1.0 LEAD_SNP rs7577642 chr2 85699750 Intergenic 5b ASSOCIATION 18464913 Protein quantitative trait loci 5.15490195999 RNU7-64P - RPSAP22 LEAD_SNP rs6547705 chr2 87044316 Intron 7 ASSOCIATION 21685912 Progressive supranuclear palsy 8.0 CD8B FUNCTIONAL_SNP rs6743139 chr2 87018452 Exon,non-coding 5b 25864 CEU:1.0;0.941 FUNCTIONAL_SNP rs4832049 chr2 87053719 Intron 5a 9403 CEU:0.936;0.825, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 LEAD_SNP rs12714207 chr2 88315793 Intergenic 4 ASSOCIATION 19414484 Serum bilirubin levels 6.30102999566 RGPD2 - KRCC1 FUNCTIONAL_SNP rs1441649 chr2 88295232 Intergenic 7 20561 CEU:0.946;0.894, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.895 LEAD_SNP rs7571971 chr2 88895351 Intron 7 ASSOCIATION 21685912 Progressive supranuclear palsy 12.3979400087 EIF2AK3 FUNCTIONAL_SNP rs867529 chr2 88913273 Coding 5a 17922 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs1805165 chr2 88874891 Coding 7 20460 CEU:1.0;0.954, CHB:1.0;0.951, JPT:1.0;0.95 FUNCTIONAL_SNP rs13045 chr2 88895123 Coding 7 228 CEU:1.0;0.829, CHB:0.947;0.814, JPT:1.0;0.863 FUNCTIONAL_SNP rs11681299 chr2 88901732 Intron 3a 6381 CEU:1.0;0.956, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs1913671 chr2 88899883 Intron 4 4532 CEU:1.0;0.836, CHB:0.949;0.859, JPT:1.0;0.952 FUNCTIONAL_SNP rs6739095 chr2 88880064 Intron 5a 15287 CEU:1.0;0.836, CHB:0.949;0.859, JPT:1.0;0.952 FUNCTIONAL_SNP rs11898161 chr2 88881648 Intron 5b 13703 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs4332926 chr2 88860264 Intron 5b 35087 CEU:1.0;0.829, CHB:0.949;0.859, JPT:1.0;0.906 FUNCTIONAL_SNP rs6731022 chr2 88917035 Intron 6 21684 CEU:1.0;0.84, CHB:0.949;0.859, JPT:1.0;0.952 FUNCTIONAL_SNP rs4972221 chr2 88870632 Intron 6 24719 CEU:1.0;0.84, CHB:0.949;0.859, JPT:1.0;0.952 FUNCTIONAL_SNP rs1606803 chr2 88933316 Intergenic 7 37965 CEU:1.0;0.956, CHB:1.0;0.909, JPT:1.0;1.0 FUNCTIONAL_SNP rs11684404 chr2 88924622 Intron 7 29271 CEU:1.0;0.836, CHB:0.901;0.812, JPT:1.0;0.952 FUNCTIONAL_SNP rs6547787 chr2 88929736 Intron 7 34385 CEU:1.0;0.836, CHB:0.901;0.812, JPT:1.0;0.952 LEAD_SNP rs11684404 chr2 88924622 Intron 7 ASSOCIATION 20881960 Height 13.0 EIF2AK3 FUNCTIONAL_SNP rs867529 chr2 88913273 Coding 5a 11349 CEU:1.0;0.836, CHB:0.951;0.863, JPT:1.0;0.953 FUNCTIONAL_SNP rs13045 chr2 88895123 Coding 7 29499 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.866 FUNCTIONAL_SNP rs11681299 chr2 88901732 Intron 3a 22890 CEU:1.0;0.875, CHB:0.95;0.86, JPT:1.0;0.953 FUNCTIONAL_SNP rs1913671 chr2 88899883 Intron 4 24739 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.612 FUNCTIONAL_SNP rs6739095 chr2 88880064 Intron 5a 44558 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.612 FUNCTIONAL_SNP rs11898161 chr2 88881648 Intron 5b 42974 CEU:1.0;0.836, CHB:0.951;0.863, JPT:1.0;0.953 FUNCTIONAL_SNP rs4332926 chr2 88860264 Intron 5b 64358 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.952 FUNCTIONAL_SNP rs6731022 chr2 88917035 Intron 6 7587 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs4972221 chr2 88870632 Intron 6 53990 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.612 FUNCTIONAL_SNP rs1606803 chr2 88933316 Intergenic 7 8694 CEU:1.0;0.875, CHB:1.0;0.911, JPT:1.0;0.953 FUNCTIONAL_SNP rs7571971 chr2 88895351 Intron 7 29271 CEU:1.0;0.836, CHB:0.901;0.812, JPT:1.0;0.952 FUNCTIONAL_SNP rs6547787 chr2 88929736 Intron 7 5114 CEU:0.956;0.915, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4907240 chr2 97228039 Intergenic 6 ASSOCIATION 21046636 Event-related brain oscillations 5.39794000867 ARID5A - KIAA1310 FUNCTIONAL_SNP rs11691670 chr2 97238770 Intergenic 5a 10731 CEU:1.0;1.0, CHB:0.946;0.811, JPT:0.949;0.901, YRI:1.0;0.555 FUNCTIONAL_SNP rs6749159 chr2 97267293 Intron 5a 39254 CEU:1.0;1.0, CHB:0.946;0.811, JPT:0.949;0.901, YRI:1.0;0.555 FUNCTIONAL_SNP rs4907241 chr2 97241928 Intergenic 5a 13889 CEU:1.0;1.0, CHB:0.946;0.811, JPT:0.949;0.901, YRI:1.0;0.555 FUNCTIONAL_SNP rs2278563 chr2 97212693 Intron 5b 15346 CEU:1.0;0.956, CHB:0.946;0.811, JPT:1.0;0.951, YRI:1.0;0.555 FUNCTIONAL_SNP rs4907237 chr2 97190497 Intergenic 5b 37542 CEU:1.0;0.831, CHB:0.874;0.594, JPT:1.0;0.559 FUNCTIONAL_SNP rs12469420 chr2 97243305 Intergenic 6 15266 CEU:1.0;1.0, CHB:0.946;0.811, JPT:0.949;0.901, YRI:1.0;0.555 FUNCTIONAL_SNP rs4907242 chr2 97273113 Intron 6 45074 CEU:1.0;0.957, CHB:0.946;0.811, JPT:0.949;0.901, YRI:1.0;0.555 FUNCTIONAL_SNP rs11682934 chr2 97237153 Intergenic 6 9114 CEU:1.0;1.0, CHB:0.946;0.811, JPT:0.949;0.901, YRI:1.0;0.555 FUNCTIONAL_SNP rs7572249 chr2 97343012 Intron 7 114973 CEU:0.953;0.832 FUNCTIONAL_SNP rs10460601 chr2 97252444 Intergenic 7 24405 CEU:1.0;1.0, CHB:0.946;0.811, JPT:0.949;0.901, YRI:1.0;0.555 FUNCTIONAL_SNP rs7575254 chr2 97275760 Intron 7 47721 CEU:1.0;0.957, CHB:0.946;0.811, JPT:0.948;0.898, YRI:1.0;0.555 FUNCTIONAL_SNP rs11678174 chr2 97249103 Intergenic 7 21064 CEU:1.0;0.916, CHB:0.946;0.811, JPT:0.949;0.901, YRI:1.0;0.555 LEAD_SNP rs2314398 chr2 97413488 Intergenic 5b ASSOCIATION 18711365 Bipolar disorder 5.52287874528 LMAN2L - CNNM4 LEAD_SNP rs9948 chr2 97500800 Intron 5a ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.22184874962 CNNM3 FUNCTIONAL_SNP rs9973492 chr2 97498481 Exon,non-coding 4 2319 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13419073 chr2 97507554 Intron 2b 6754 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs1320146 chr2 97507727 Intron 5b 6927 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6576986 chr2 97508320 Intron 5b 7520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6576987 chr2 97512059 Intergenic 5b 11259 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 LEAD_SNP rs12618769 chr2 99239931 Exon,non-coding 5b ASSOCIATION 21738484 Bipolar disorder 6.0 MGAT4A FUNCTIONAL_SNP rs3769693 chr2 99259346 Intron 5b 19415 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.913;0.833 FUNCTIONAL_SNP rs7560357 chr2 99247820 Intron 6 7889 CEU:1.0;1.0, CHB:1.0;0.697, JPT:1.0;0.758, YRI:1.0;0.914 FUNCTIONAL_SNP rs3769694 chr2 99259239 Intron 6 19308 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.897;0.666 FUNCTIONAL_SNP rs6741558 chr2 99258487 Intron 7 18556 CEU:1.0;1.0, CHB:1.0;0.697, JPT:1.0;0.758, YRI:0.913;0.833 FUNCTIONAL_SNP rs17513621 chr2 99246559 Intron 7 6628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.746 FUNCTIONAL_SNP rs17513782 chr2 99260939 Intron 7 21008 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.585 FUNCTIONAL_SNP rs3769695 chr2 99259020 Intron 7 19089 CEU:1.0;1.0, CHB:1.0;0.697, JPT:1.0;0.758, YRI:0.913;0.833 FUNCTIONAL_SNP rs3769696 chr2 99258927 Intron 7 18996 CEU:1.0;1.0, CHB:1.0;0.697, JPT:1.0;0.758, YRI:0.908;0.605 FUNCTIONAL_SNP rs3769697 chr2 99242580 Intron 7 2649 CEU:1.0;0.926, CHB:1.0;0.696, JPT:1.0;0.758, YRI:1.0;1.0 LEAD_SNP rs6733011 chr2 99465502 Intron 7 ASSOCIATION 19416921 Bipolar disorder 5.52287874528 C2orf55 LEAD_SNP rs11676922 chr2 100806940 Intergenic 7 ASSOCIATION 20453842 Rheumatoid arthritis 14.0 AFF3 - LONRF2 FUNCTIONAL_SNP rs11694875 chr2 100732845 Intron 4 74095 CEU:1.0;0.852 FUNCTIONAL_SNP rs6712515 chr2 100806514 Intergenic 5a 426 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:0.961;0.923 FUNCTIONAL_SNP rs4851269 chr2 100830348 Intron 5b 23408 CEU:1.0;0.809, CHB:1.0;0.943, JPT:0.88;0.733 FUNCTIONAL_SNP rs10209110 chr2 100672692 Intron 5b 134248 CEU:1.0;0.822 FUNCTIONAL_SNP rs12995420 chr2 100652578 Intron 5b 154362 CEU:1.0;0.822 FUNCTIONAL_SNP rs6733895 chr2 100666082 Intron 6 140858 CEU:1.0;0.822 FUNCTIONAL_SNP rs11123811 chr2 100760172 Intergenic 6 46768 CEU:0.949;0.857 FUNCTIONAL_SNP rs7605430 chr2 100647552 Intron 6 159388 CEU:1.0;0.813 FUNCTIONAL_SNP rs9653442 chr2 100825367 Intron 6 18427 CEU:1.0;1.0, CHB:0.941;0.885, JPT:0.88;0.733 FUNCTIONAL_SNP rs1160542 chr2 100832155 Intron 6 25215 CEU:1.0;1.0, CHB:0.941;0.885, JPT:0.88;0.733 FUNCTIONAL_SNP rs6732141 chr2 100743492 Intron 6 63448 CEU:0.948;0.814 FUNCTIONAL_SNP rs2871326 chr2 100662010 Intron 7 144930 CEU:1.0;0.822 FUNCTIONAL_SNP rs7580200 chr2 100811903 Intergenic 7 4963 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946 FUNCTIONAL_SNP rs6749757 chr2 100730111 Intron 7 76829 CEU:0.944;0.804 FUNCTIONAL_SNP rs11123805 chr2 100643464 Intron 7 163476 CEU:1.0;0.822 FUNCTIONAL_SNP rs7608424 chr2 100796543 Intergenic 7 10397 CEU:1.0;0.906 FUNCTIONAL_SNP rs12712065 chr2 100761105 Intergenic 7 45835 CEU:0.949;0.857 FUNCTIONAL_SNP rs2309837 chr2 100837567 Intron 7 30627 CEU:1.0;0.809, CHB:0.941;0.885, JPT:0.88;0.733 FUNCTIONAL_SNP rs961788 chr2 100641459 Intron 7 165481 CEU:1.0;0.813 FUNCTIONAL_SNP rs1062143 chr2 100659796 Intron 7 147144 CEU:1.0;0.822 FUNCTIONAL_SNP rs1115910 chr2 100647872 Intron 7 159068 CEU:1.0;0.813 FUNCTIONAL_SNP rs893245 chr2 100814893 Intergenic 7 7953 CEU:1.0;0.818, CHB:1.0;0.945, JPT:1.0;0.902, YRI:0.958;0.847 FUNCTIONAL_SNP rs1160544 chr2 100832218 Intron 7 25278 CEU:1.0;0.818, CHB:0.943;0.889, JPT:0.942;0.799 FUNCTIONAL_SNP rs6740838 chr2 100813499 Intergenic 7 6559 CEU:1.0;0.809, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;0.885 FUNCTIONAL_SNP rs10865035 chr2 100835734 Intron 7 28794 CEU:1.0;1.0, CHB:0.943;0.889, JPT:0.885;0.707 FUNCTIONAL_SNP rs11885529 chr2 100746935 Intron 7 60005 CEU:0.944;0.804 LEAD_SNP rs9653442 chr2 100825367 Intron 6 ASSOCIATION 17554260 Type 1 diabetes 5.30102999566 AFF3 - LONRF2 LEAD_SNP rs10865035 chr2 100835734 Intron 7 ASSOCIATION 20453842 Rheumatoid arthritis 5.69897000434 AFF3 - LONRF2 FUNCTIONAL_SNP rs6712515 chr2 100806514 Intergenic 5a 29220 CEU:1.0;0.963, CHB:0.953;0.909, JPT:0.95;0.79 FUNCTIONAL_SNP rs4851269 chr2 100830348 Intron 5b 5386 CEU:1.0;0.816, CHB:1.0;0.953, JPT:1.0;0.953 FUNCTIONAL_SNP rs11123811 chr2 100760172 Intergenic 6 75562 CEU:0.923;0.82 FUNCTIONAL_SNP rs9653442 chr2 100825367 Intron 6 10367 CEU:1.0;0.96, CHB:0.951;0.905, JPT:1.0;0.953 FUNCTIONAL_SNP rs1160542 chr2 100832155 Intron 6 3579 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs7580200 chr2 100811903 Intergenic 7 23831 CEU:1.0;0.96, CHB:0.951;0.905, JPT:0.946;0.775 FUNCTIONAL_SNP rs7608424 chr2 100796543 Intergenic 7 39191 CEU:0.961;0.856 FUNCTIONAL_SNP rs12712065 chr2 100761105 Intergenic 7 74629 CEU:0.923;0.82 FUNCTIONAL_SNP rs2309837 chr2 100837567 Intron 7 1833 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs11676922 chr2 100806940 Intergenic 7 28794 CEU:1.0;1.0, CHB:0.943;0.889, JPT:0.885;0.707 FUNCTIONAL_SNP rs893245 chr2 100814893 Intergenic 7 20841 CEU:1.0;0.825, CHB:1.0;0.955, JPT:1.0;0.837 FUNCTIONAL_SNP rs1160544 chr2 100832218 Intron 7 3516 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;0.956 FUNCTIONAL_SNP rs6740838 chr2 100813499 Intergenic 7 22235 CEU:1.0;0.816, CHB:0.951;0.905, JPT:0.946;0.775 LEAD_SNP rs2278729 chr2 101668857 Intron 5b ASSOCIATION 20548944 Osteoporosis 7.0 TBC1D8 LEAD_SNP rs6711606 chr2 101922170 Intron 5a ASSOCIATION 20686608 Pancreatic cancer 5.39794000867 RNF149 LEAD_SNP rs2310173 chr2 102663628 Intergenic 6 ASSOCIATION 21297633 Ulcerative colitis 11.5228787453 IL1R2 - IL1R1 ASSOCIATION 20062062 Ankylosing spondylitis 6.30102999566 IL1R2 - IL1R1 FUNCTIONAL_SNP rs10185424 chr2 102662888 Intergenic 4 740 CEU:1.0;1.0, CHB:1.0;0.662, JPT:0.869;0.64 FUNCTIONAL_SNP rs7588933 chr2 102662651 Intergenic 4 977 CEU:1.0;1.0, CHB:1.0;0.62 FUNCTIONAL_SNP rs4851533 chr2 102651670 Intergenic 5b 11958 CEU:1.0;0.96, CHB:1.0;0.578 FUNCTIONAL_SNP rs4851534 chr2 102654399 Intergenic 5b 9229 CEU:1.0;0.96, CHB:1.0;0.62 LEAD_SNP rs1420101 chr2 102957716 Coding 5a ASSOCIATION 19198610 Plasma eosinophil count 13.3010299957 IL1RL1 FUNCTIONAL_SNP rs1035130 chr2 103001402 Coding 7 43686 CEU:1.0;0.91, CHB:0.94;0.717, JPT:1.0;0.818 FUNCTIONAL_SNP rs12905 chr2 102960007 Exon,non-coding 5a 2291 CEU:1.0;0.91, CHB:1.0;0.735, JPT:1.0;0.867 FUNCTIONAL_SNP rs3821204 chr2 102960281 Exon,non-coding 4 2565 CEU:1.0;0.91, CHB:1.0;0.817, JPT:1.0;0.867 FUNCTIONAL_SNP rs3732126 chr2 103013962 Exon,non-coding 5b 56246 CEU:1.0;0.91, CHB:0.941;0.724, JPT:1.0;0.826 FUNCTIONAL_SNP rs17027255 chr2 103090127 Exon,non-coding 7 132411 CEU:1.0;0.91, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs12712142 chr2 102960584 Exon,non-coding 4 2868 CEU:1.0;0.8, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1135354 chr2 103014302 Exon,non-coding 6 56586 CEU:1.0;0.91, CHB:0.941;0.724, JPT:1.0;0.826 FUNCTIONAL_SNP rs10490204 chr2 103056534 Exon,non-coding 5a 98818 CEU:1.0;0.91, CHB:0.937;0.679, JPT:1.0;0.826 FUNCTIONAL_SNP rs4851582 chr2 103051558 Exon,non-coding 3a 93842 CEU:1.0;0.91, CHB:0.939;0.683, JPT:1.0;0.823 FUNCTIONAL_SNP rs17027166 chr2 103055420 Exon,non-coding 7 97704 CEU:1.0;0.91, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs11681718 chr2 103051144 Exon,non-coding 5b 93428 CEU:1.0;0.91, CHB:0.937;0.676, JPT:1.0;0.826 FUNCTIONAL_SNP rs6543119 chr2 102963072 Intron 4 5356 CEU:1.0;0.8, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs950880 chr2 102932562 Intron 4 25154 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11123923 chr2 102967844 Intron 4 10128 CEU:1.0;0.8, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4851011 chr2 103089678 Intergenic 4 131962 CEU:1.0;0.91, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs17026974 chr2 102952360 Intron 4 5356 CEU:1.0;0.91, CHB:1.0;0.735, JPT:1.0;0.867 FUNCTIONAL_SNP rs17027087 chr2 103015918 Intergenic 5a 58202 CEU:1.0;0.91, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs3771156 chr2 103036677 Intron 5a 78961 CEU:1.0;0.91, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs11693955 chr2 103029165 Intergenic 5a 71449 CEU:1.0;0.91, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs873022 chr2 102955683 Intron 5b 2033 CEU:1.0;0.91, CHB:1.0;0.735, JPT:1.0;0.867 FUNCTIONAL_SNP rs3771150 chr2 103060851 Intron 5b 103135 CEU:1.0;0.91, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs4851570 chr2 103006387 Intron 5b 48671 CEU:1.0;0.91, CHB:0.941;0.724, JPT:1.0;0.826 FUNCTIONAL_SNP rs12998521 chr2 102974417 Intron 5b 16701 CEU:1.0;0.8, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs3732123 chr2 103018077 Intergenic 5b 60361 CEU:1.0;0.91, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs2160202 chr2 102986154 Intron 6 28438 CEU:1.0;0.949, CHB:1.0;0.812, JPT:1.0;0.822 FUNCTIONAL_SNP rs12469506 chr2 102965871 Intron 6 8155 CEU:1.0;0.91, CHB:1.0;0.817, JPT:1.0;0.867 FUNCTIONAL_SNP rs17027037 chr2 102994884 Intron 6 37168 CEU:1.0;0.91, CHB:0.941;0.724, JPT:1.0;0.826 FUNCTIONAL_SNP rs2080289 chr2 102995020 Intron 7 37304 CEU:1.0;0.91, CHB:0.941;0.724, JPT:1.0;0.826 FUNCTIONAL_SNP rs17027230 chr2 103079330 Intergenic 7 121614 CEU:1.0;0.91, CHB:0.937;0.679, JPT:1.0;0.823 FUNCTIONAL_SNP rs6710885 chr2 102977537 Intron 7 19821 CEU:1.0;0.8, CHB:1.0;1.0, JPT:1.0;0.907 FUNCTIONAL_SNP rs17027179 chr2 103057159 Intron 7 99443 CEU:1.0;0.91, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs13001325 chr2 102939036 Intron 7 18680 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3732129 chr2 102957532 Intron 7 184 CEU:1.0;0.91, CHB:1.0;0.735, JPT:1.0;0.867 FUNCTIONAL_SNP rs887971 chr2 103041167 Intron 7 83451 CEU:0.952;0.865, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs887972 chr2 103040945 Intron 7 83229 CEU:0.949;0.857, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs17027258 chr2 103091540 Intron 7 133824 CEU:1.0;0.91, CHB:0.936;0.644, JPT:1.0;0.823 FUNCTIONAL_SNP rs17027006 chr2 102965332 Intron 7 7616 CEU:1.0;0.867, CHB:1.0;0.817, JPT:1.0;0.867 FUNCTIONAL_SNP rs12479210 chr2 102949161 Intron 7 8555 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3771171 chr2 102985950 Intron 7 28234 CEU:1.0;0.905, CHB:1.0;0.812, JPT:1.0;0.818 FUNCTIONAL_SNP rs3771172 chr2 102985812 Intron 7 28096 CEU:1.0;0.91, CHB:1.0;0.817, JPT:1.0;0.788 FUNCTIONAL_SNP rs3771177 chr2 102955860 Intron 7 1856 CEU:1.0;0.91, CHB:1.0;0.735, JPT:1.0;0.867 FUNCTIONAL_SNP rs10490203 chr2 103059237 Intron 7 101521 CEU:1.0;0.91, CHB:0.939;0.683, JPT:1.0;0.826 FUNCTIONAL_SNP rs13017455 chr2 102964742 Intron 7 7026 CEU:1.0;0.8, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11683700 chr2 102996805 Intron 7 39089 CEU:1.0;0.904, CHB:0.923;0.659, JPT:0.937;0.747 FUNCTIONAL_SNP rs2287034 chr2 103010588 Intron 7 52872 CEU:1.0;0.91, CHB:0.941;0.724, JPT:1.0;0.826 FUNCTIONAL_SNP rs2287035 chr2 103010530 Intron 7 52814 CEU:1.0;0.91, CHB:0.941;0.724, JPT:1.0;0.826 FUNCTIONAL_SNP rs2287037 chr2 102979028 Intron 7 21312 CEU:1.0;0.8, CHB:1.0;0.952, JPT:1.0;0.909 FUNCTIONAL_SNP rs13019081 chr2 102950822 Intron 7 6894 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs13015714 chr2 102971865 Intergenic 6 ASSOCIATION 18311140 Celiac disease 8.39794000867 IL1RL1 - IL18R1 LEAD_SNP rs3771166 chr2 102986222 Intron 7 ASSOCIATION 20860503 Asthma 8.52287874528 IL18R1 FUNCTIONAL_SNP rs4988956 chr2 102968007 Coding 4 18215 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs4988957 chr2 102968075 Coding 4 18147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs4988958 chr2 102968285 Coding 5b 17937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.915 FUNCTIONAL_SNP rs10206753 chr2 102968362 Coding 7 17860 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs10192036 chr2 102968211 Coding 5b 18011 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs10192157 chr2 102968356 Coding 7 17866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs10204137 chr2 102968212 Coding 5b 18010 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs4988955 chr2 102967928 Intron 3a 18294 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs10176664 chr2 102976172 Intron 4 10050 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7603730 chr2 102974371 Intron 5b 11851 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs10170583 chr2 102974764 Intron 5b 11458 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs6751967 chr2 102967413 Intron 6 18809 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs6749114 chr2 102967587 Intron 6 18635 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs1861245 chr2 102966906 Intron 7 19316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs3755276 chr2 102978459 Intron 7 7763 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13424006 chr2 102967236 Intron 7 18986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.913 FUNCTIONAL_SNP rs1974675 chr2 102986375 Intron 7 153 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1362348 chr2 102984624 Intron 7 1598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10204837 chr2 102977730 Intron 7 8492 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2058660 chr2 103054449 Intron 6 ASSOCIATION 21102463 Crohn's disease 11.6989700043 IL18RAP FUNCTIONAL_SNP rs6543134 chr2 103050458 Exon,non-coding 6 3991 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7559479 chr2 103068787 Exon,non-coding 5b 14338 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs4851009 chr2 103055644 Exon,non-coding 7 1195 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs3755267 chr2 103038587 Intron 3a 15862 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs6746271 chr2 103052995 Intron 4 1454 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1558650 chr2 103060024 Intron 4 5575 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3755268 chr2 103038527 Intron 4 15922 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs1420106 chr2 103035044 Intergenic 4 19405 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs6718157 chr2 103079814 Intergenic 5a 25365 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs2058658 chr2 103054803 Intron 5a 354 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1465321 chr2 102986618 Intron 5a 67831 CEU:1.0;1.0, CHB:0.95;0.903, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs2270297 chr2 102992675 Intron 5b 61774 CEU:1.0;1.0, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs2041756 chr2 103049910 Intron 5b 4539 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs1807782 chr2 103033147 Intergenic 5b 21302 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs3817465 chr2 103039584 Intron 5b 14865 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs6753717 chr2 102993161 Intron 6 61288 CEU:1.0;1.0, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs6761825 chr2 103075561 Intergenic 6 21112 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs6720564 chr2 103079297 Intergenic 6 24848 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs13015714 chr2 102971865 Intergenic 6 82584 CEU:1.0;1.0, CHB:0.953;0.907, JPT:1.0;0.898 FUNCTIONAL_SNP rs6708413 chr2 103063369 Intron 6 8920 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4851008 chr2 103026611 Intergenic 6 27838 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs1468791 chr2 103092021 Intron 6 37572 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs2058622 chr2 102985424 Intron 6 69025 CEU:1.0;1.0, CHB:0.95;0.903, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs2058623 chr2 102986170 Intron 6 68279 CEU:1.0;1.0, CHB:0.951;0.905, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs6737668 chr2 103093081 Intron 7 38632 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs11694658 chr2 103045020 Intron 7 9429 CEU:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs2160232 chr2 103046880 Intron 7 7569 CEU:0.926;0.857, CHB:1.0;0.944, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1035127 chr2 103019919 Intergenic 7 34530 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs6543141 chr2 103076351 Intergenic 7 21902 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs2110734 chr2 103052206 Intron 7 2243 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.791 FUNCTIONAL_SNP rs2110735 chr2 103050925 Intron 7 3524 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs3771170 chr2 102985980 Intron 7 68469 CEU:1.0;0.935, CHB:0.951;0.905, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs6717915 chr2 103079619 Intergenic 7 25170 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs4241210 chr2 103078740 Intergenic 7 24291 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs6734736 chr2 103062880 Intron 7 8431 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6705001 chr2 103076210 Intergenic 7 21761 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs6716784 chr2 103048467 Intron 7 5982 CEU:0.934;0.872, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4851007 chr2 103024813 Intergenic 7 29636 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs2272128 chr2 103039929 Intron 7 14520 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs4851575 chr2 103025203 Intergenic 7 29246 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs4070554 chr2 103074493 Intergenic 7 20044 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs10469840 chr2 103093243 Intron 7 38794 CEU:1.0;0.945, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs990171 chr2 103086770 Intergenic 7 32321 CEU:0.94;0.883, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7597819 chr2 103092906 Intron 7 38457 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs917996 chr2 103082273 Intergenic 7 27824 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs917997 chr2 103070568 Intergenic 7 16119 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs6750020 chr2 102994714 Intron 7 59735 CEU:1.0;1.0, CHB:0.952;0.906, JPT:1.0;1.0, YRI:1.0;0.743 LEAD_SNP rs917997 chr2 103070568 Intergenic 7 ASSOCIATION 20190752 Celiac disease 15.0 IL18RAP - SLC9A4 FUNCTIONAL_SNP rs6543134 chr2 103050458 Exon,non-coding 6 20110 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs7559479 chr2 103068787 Exon,non-coding 5b 1781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4851009 chr2 103055644 Exon,non-coding 7 14924 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.79;0.624 FUNCTIONAL_SNP rs3755267 chr2 103038587 Intron 3a 31981 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.79;0.624 FUNCTIONAL_SNP rs6746271 chr2 103052995 Intron 4 17573 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs1558650 chr2 103060024 Intron 4 10544 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs3755268 chr2 103038527 Intron 4 32041 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.79;0.624 FUNCTIONAL_SNP rs1420106 chr2 103035044 Intergenic 4 35524 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.79;0.624 FUNCTIONAL_SNP rs6718157 chr2 103079814 Intergenic 5a 9246 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2058658 chr2 103054803 Intron 5a 15765 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1465321 chr2 102986618 Intron 5a 83950 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2270297 chr2 102992675 Intron 5b 77893 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.787;0.512 FUNCTIONAL_SNP rs2041756 chr2 103049910 Intron 5b 20658 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.79;0.624 FUNCTIONAL_SNP rs1807782 chr2 103033147 Intergenic 5b 37421 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.787;0.512 FUNCTIONAL_SNP rs3817465 chr2 103039584 Intron 5b 30984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.787;0.512 FUNCTIONAL_SNP rs6753717 chr2 102993161 Intron 6 77407 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.79;0.624 FUNCTIONAL_SNP rs6761825 chr2 103075561 Intergenic 6 4993 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6720564 chr2 103079297 Intergenic 6 8729 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13015714 chr2 102971865 Intergenic 6 98703 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.898 FUNCTIONAL_SNP rs6708413 chr2 103063369 Intron 6 7199 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs4851008 chr2 103026611 Intergenic 6 43957 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.787;0.512 FUNCTIONAL_SNP rs1468791 chr2 103092021 Intron 6 21453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2058622 chr2 102985424 Intron 6 85144 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2058623 chr2 102986170 Intron 6 84398 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.786;0.51 FUNCTIONAL_SNP rs2058660 chr2 103054449 Intron 6 16119 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs6737668 chr2 103093081 Intron 7 22513 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs11694658 chr2 103045020 Intron 7 25548 CEU:1.0;1.0, YRI:0.789;0.622 FUNCTIONAL_SNP rs2160232 chr2 103046880 Intron 7 23688 CEU:0.926;0.857, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs1035127 chr2 103019919 Intergenic 7 50649 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.787;0.512 FUNCTIONAL_SNP rs6543141 chr2 103076351 Intergenic 7 5783 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2110734 chr2 103052206 Intron 7 18362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.791 FUNCTIONAL_SNP rs2110735 chr2 103050925 Intron 7 19643 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.79;0.624 FUNCTIONAL_SNP rs3771170 chr2 102985980 Intron 7 84588 CEU:1.0;0.935, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.786;0.51 FUNCTIONAL_SNP rs6717915 chr2 103079619 Intergenic 7 9051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4241210 chr2 103078740 Intergenic 7 8172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6734736 chr2 103062880 Intron 7 7688 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6705001 chr2 103076210 Intergenic 7 5642 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6716784 chr2 103048467 Intron 7 22101 CEU:0.934;0.872, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs4851007 chr2 103024813 Intergenic 7 45755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.787;0.512 FUNCTIONAL_SNP rs2272128 chr2 103039929 Intron 7 30639 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.787;0.512 FUNCTIONAL_SNP rs4851575 chr2 103025203 Intergenic 7 45365 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4070554 chr2 103074493 Intergenic 7 3925 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10469840 chr2 103093243 Intron 7 22675 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs990171 chr2 103086770 Intergenic 7 16202 CEU:0.94;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7597819 chr2 103092906 Intron 7 22338 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs917996 chr2 103082273 Intergenic 7 11705 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6750020 chr2 102994714 Intron 7 75854 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.739;0.547 LEAD_SNP rs17027258 chr2 103091540 Intron 7 ASSOCIATION 21738478 White blood cell types 5.15490195999 SLC9A4 FUNCTIONAL_SNP rs11123928 chr2 103061286 Intron 7 30254 CEU:1.0;0.868, CHB:1.0;0.902, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6735786 chr2 103770238 Intron 5b ASSOCIATION 19079262 Bone mineral density (hip) 5.69897000434 TMEM182 - RPL23AP27 LEAD_SNP rs12615966 chr2 105378957 Intergenic 7 ASSOCIATION 20686608 Pancreatic cancer 5.15490195999 RPL23AP27 - POU3F3 FUNCTIONAL_SNP rs17030286 chr2 105381220 Intergenic 5a 2263 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs9941579 chr2 105384506 Intergenic 5b 5549 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs17030324 chr2 105403251 Intergenic 6 24294 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs12620555 chr2 105379115 Intergenic 6 158 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs1947308 chr2 105391930 Intergenic 7 12973 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs17020857 chr2 105401306 Intergenic 7 22349 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 LEAD_SNP rs6712932 chr2 105837598 Intergenic 7 ASSOCIATION 17668382 Type 2 diabetes 5.22184874962 MRPS9 - GPR45 FUNCTIONAL_SNP rs10496390 chr2 105838791 Intergenic 5b 1193 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs1978821 chr2 105833235 Intergenic 6 4363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.949;0.857 FUNCTIONAL_SNP rs10170234 chr2 105841841 Intergenic 7 4243 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:0.951;0.862 FUNCTIONAL_SNP rs10210149 chr2 105839324 Intergenic 7 1726 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 LEAD_SNP rs1020064 chr2 105897740 Intron 6 ASSOCIATION 19754311 AIDS 5.15490195999 TGFBRAP1 FUNCTIONAL_SNP rs2576736 chr2 105890971 Intron 5b 6769 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs1030878 chr2 105910598 Intron 5b 12858 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;0.933, YRI:1.0;0.914 FUNCTIONAL_SNP rs2576735 chr2 105888839 Intron 5b 8901 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.911;0.704 FUNCTIONAL_SNP rs920217 chr2 105904662 Intron 6 6922 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17030766 chr2 105911905 Intron 7 14165 CEU:1.0;0.929, CHB:1.0;0.848 FUNCTIONAL_SNP rs2576742 chr2 105898822 Intron 7 1082 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs2576741 chr2 105897964 Intron 7 224 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3828300 chr2 105901107 Intron 7 3367 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1866038 chr2 105878522 Intergenic 7 19218 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877, YRI:1.0;0.829 FUNCTIONAL_SNP rs2679895 chr2 105906480 Intron 7 8740 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 LEAD_SNP rs4676049 chr2 109635257 Intergenic 3a ASSOCIATION 20885792 Alzheimer's disease (late onset) 7.39794000867 EDAR - SH3RF3 FUNCTIONAL_SNP rs17034808 chr2 109636437 Intergenic 5a 1180 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.877, YRI:0.918;0.809 LEAD_SNP rs17483466 chr2 111797458 Intron 5b ASSOCIATION 18758461 Chronic lymphocytic leukemia 9.69897000434 ACOXL LEAD_SNP rs7578982 chr2 111836538 Intron 7 ASSOCIATION 21738478 White blood cell types 6.39794000867 ACOXL FUNCTIONAL_SNP rs4849381 chr2 111834381 Intron 7 2157 CEU:1.0;0.956, CHB:1.0;0.953, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs6738028 chr2 111949327 Intergenic 7 ASSOCIATION 21533175 Serum dehydroepiandrosterone sulphate levels 7.69897000434 BCL2L11 - RPS14P4 FUNCTIONAL_SNP rs6753785 chr2 111923630 Exon,non-coding 7 25697 CEU:1.0;0.857, CHB:0.951;0.827, JPT:1.0;0.792 FUNCTIONAL_SNP rs4849442 chr2 111934219 Intergenic 4 15108 CEU:1.0;0.884, CHB:1.0;0.954, JPT:1.0;0.865 FUNCTIONAL_SNP rs3827536 chr2 111920741 Intron 4 28586 CEU:1.0;0.818, CHB:0.949;0.819, JPT:1.0;0.783, YRI:0.807;0.546 FUNCTIONAL_SNP rs36018702 chr2 111928373 Intergenic 6 20954 CEU:1.0;0.851, CHB:0.949;0.819, JPT:1.0;0.783, YRI:0.807;0.546 FUNCTIONAL_SNP rs616582 chr2 111941995 Intergenic 7 7332 CEU:1.0;0.925, CHB:1.0;0.956, JPT:1.0;0.955, YRI:1.0;0.59 FUNCTIONAL_SNP rs17558117 chr2 111940996 Intergenic 7 8331 CEU:1.0;0.96, CHB:1.0;0.954, JPT:1.0;0.908, YRI:1.0;0.839 LEAD_SNP rs6720394 chr2 111989372 Intron 2b ASSOCIATION 21151127 Primary sclerosing cholangitis 7.39794000867 BCL2L11 - RPS14P4 LEAD_SNP rs6542095 chr2 113529183 Intergenic 6 ASSOCIATION 20844546 Endometriosis 5.52287874528 CKAP2L - IL1A FUNCTIONAL_SNP rs10496445 chr2 113552158 Intergenic 2b 22975 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13009294 chr2 113552678 Intergenic 2b 23495 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.889 FUNCTIONAL_SNP rs4848302 chr2 113551716 Intergenic 3a 22533 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4848301 chr2 113551694 Intergenic 4 22511 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10496444 chr2 113553668 Intergenic 4 24485 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.889 FUNCTIONAL_SNP rs1609682 chr2 113540205 Intron 4 11022 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3783546 chr2 113534830 Intron 4 5647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3783512 chr2 113547809 Intergenic 5a 18626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3783525 chr2 113541819 Intron 5b 12636 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3783550 chr2 113532885 Intron 5b 3702 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3783513 chr2 113547470 Intergenic 7 18287 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12478842 chr2 113550688 Intergenic 7 21505 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12711741 chr2 113553165 Intergenic 7 23982 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.889 LEAD_SNP rs11677416 chr2 113529240 Intergenic 7 ASSOCIATION 21107309 Working memory 6.15490195999 CKAP2L - IL1A FUNCTIONAL_SNP rs17561 chr2 113537223 Coding 4 7983 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2856836 chr2 113532083 Exon,non-coding 7 2843 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6761276 chr2 113832312 Coding 7 ASSOCIATION 18464913 Protein quantitative trait loci 5.15490195999 IL1F10 LEAD_SNP rs6734238 chr2 113841030 Intergenic 5b ASSOCIATION 21300955 C-reactive protein 16.6989700043 IL1F10 - IL1RN FUNCTIONAL_SNP rs6741180 chr2 113844384 Exon,non-coding 7 3354 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.649 FUNCTIONAL_SNP rs4496335 chr2 113844475 Exon,non-coding 7 3445 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13424580 chr2 113852564 Intergenic 5a 11534 CEU:0.956;0.841, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7574159 chr2 113859761 Intergenic 5b 18731 CEU:0.956;0.809, CHB:1.0;0.846, JPT:1.0;1.0 FUNCTIONAL_SNP rs13410964 chr2 113843283 Intergenic 5b 2253 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10188292 chr2 113840443 Intergenic 6 587 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10176274 chr2 113840575 Intergenic 6 455 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10171849 chr2 113865834 Intron 6 24804 CEU:0.957;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13398728 chr2 113842506 Intergenic 6 1476 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.533 FUNCTIONAL_SNP rs6722922 chr2 113841515 Intergenic 6 485 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12328766 chr2 113846738 Intergenic 6 5708 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6743171 chr2 113840058 Intergenic 7 972 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1446509 chr2 113851159 Intergenic 7 10129 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.649 FUNCTIONAL_SNP rs6730516 chr2 113848961 Intergenic 7 7931 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7574427 chr2 113860038 Intergenic 7 19008 CEU:0.957;0.845, CHB:1.0;0.846, JPT:1.0;1.0 FUNCTIONAL_SNP rs13382561 chr2 113863536 Intergenic 7 22506 CEU:0.957;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12329129 chr2 113847007 Intergenic 7 5977 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.643 FUNCTIONAL_SNP rs12328368 chr2 113847144 Intergenic 7 6114 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.649 FUNCTIONAL_SNP rs6738239 chr2 113850792 Intergenic 7 9762 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.649 FUNCTIONAL_SNP rs17207494 chr2 113864010 Intergenic 7 22980 CEU:0.957;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6750559 chr2 113841532 Intergenic 7 502 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.649 FUNCTIONAL_SNP rs6746979 chr2 113854120 Intergenic 7 13090 CEU:0.952;0.826, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9973741 chr2 113853381 Intergenic 7 12351 CEU:0.957;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1446510 chr2 113851517 Intergenic 7 10487 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.649 LEAD_SNP rs272000 chr2 116655795 Intergenic 6 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.04575749056 RPSAP23 - TRNAL46P FUNCTIONAL_SNP rs272017 chr2 116646175 Intergenic 7 9620 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.922 LEAD_SNP rs651477 chr2 119395691 Intergenic 7 ASSOCIATION 19010793 Multiple sclerosis 5.15490195999 INSIG2 - EN1 LEAD_SNP rs17189298 chr2 119845317 Intergenic 6 ASSOCIATION 20932310 T-tau 6.52287874528 MARCO - C1QL2 FUNCTIONAL_SNP rs893769 chr2 119840084 Intergenic 7 5233 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12999348 chr2 119834827 Intergenic 7 10490 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2587695 chr2 120321817 Intron 6 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 6.52287874528 PCDP1 FUNCTIONAL_SNP rs2579623 chr2 120298350 Intergenic 7 23467 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.82 FUNCTIONAL_SNP rs2587706 chr2 120323261 Intron 7 1444 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.886 LEAD_SNP rs7581710 chr2 121195181 Intergenic 5b ASSOCIATION 21552555 Obesity 6.69897000434 INHBB - GLI2 FUNCTIONAL_SNP rs12613245 chr2 121193925 Intergenic 5b 1256 CEU:1.0;1.0, CHB:1.0;0.823, JPT:0.901;0.811 LEAD_SNP rs11122834 chr2 121701289 Intron 5b ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.30102999566 GLI2 LEAD_SNP rs1527243 chr2 123291022 Intergenic 7 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 6.0 TSN - CNTNAP5 FUNCTIONAL_SNP rs12711589 chr2 123294199 Intergenic 7 3177 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;0.924, YRI:1.0;1.0 LEAD_SNP rs17367118 chr2 123641611 Intergenic 4 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.04575749056 TSN - CNTNAP5 LEAD_SNP rs1367248 chr2 124998364 Intron 7 ASSOCIATION 17903302 Tonometry 5.52287874528 CNTNAP5 FUNCTIONAL_SNP rs11679566 chr2 124972048 Intron 5b 26316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs1367245 chr2 124965993 Intron 6 32371 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs4311067 chr2 124958867 Intron 6 39497 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs2420570 chr2 124958632 Intron 7 39732 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.831 LEAD_SNP rs17727261 chr2 125281910 Coding 7 ASSOCIATION 19721433 Response to antipsychotic treatment 6.30102999566 CNTNAP5 LEAD_SNP rs2901331 chr2 125327950 Intron 7 ASSOCIATION 20339536 Response to statin therapy 5.22184874962 CNTNAP5 FUNCTIONAL_SNP rs6739605 chr2 125329041 Intron 7 1091 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17320347 chr2 125329445 Intron 7 1495 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17392176 chr2 125322648 Intron 7 5302 CEU:1.0;0.877 LEAD_SNP rs13418717 chr2 127662897 Intergenic 6 ASSOCIATION 20445134 Heart failure 5.52287874528 GYPC - BIN1 FUNCTIONAL_SNP rs13411741 chr2 127666335 Intergenic 4 3438 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13398472 chr2 127622469 Intergenic 5a 40428 CEU:1.0;1.0 FUNCTIONAL_SNP rs4663053 chr2 127638990 Intergenic 5b 23907 CEU:1.0;1.0 FUNCTIONAL_SNP rs4663054 chr2 127639995 Intergenic 5b 22902 CEU:1.0;1.0, CHB:0.908;0.614, JPT:0.759;0.536 FUNCTIONAL_SNP rs7425345 chr2 127640396 Intergenic 5b 22501 CEU:1.0;1.0, CHB:0.908;0.614, JPT:0.759;0.536 FUNCTIONAL_SNP rs951817 chr2 127664894 Intergenic 6 1997 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13393833 chr2 127653076 Intergenic 6 9821 CEU:1.0;1.0, CHB:1.0;0.517 FUNCTIONAL_SNP rs1397340 chr2 127660818 Intergenic 6 2079 CEU:1.0;0.866 FUNCTIONAL_SNP rs10180994 chr2 127660075 Intergenic 7 2822 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.873 FUNCTIONAL_SNP rs951816 chr2 127665049 Intergenic 7 2152 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12329197 chr2 127645411 Intergenic 7 17486 CEU:1.0;1.0 FUNCTIONAL_SNP rs7572403 chr2 127662420 Intergenic 7 477 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.543 FUNCTIONAL_SNP rs9808009 chr2 127633590 Intergenic 7 29307 CEU:1.0;1.0 FUNCTIONAL_SNP rs13403026 chr2 127618436 Intergenic 7 44461 CEU:1.0;1.0 FUNCTIONAL_SNP rs6733255 chr2 127662386 Intergenic 7 511 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3795874 chr2 127656383 Intergenic 7 6514 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.818 FUNCTIONAL_SNP rs13401458 chr2 127657770 Intron 7 5127 CEU:1.0;1.0, CHB:1.0;0.517 FUNCTIONAL_SNP rs10167924 chr2 127658694 Intron 7 4203 CEU:1.0;1.0, CHB:1.0;0.517 FUNCTIONAL_SNP rs10496658 chr2 127663497 Intergenic 7 600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.522 FUNCTIONAL_SNP rs4452092 chr2 127655112 Intergenic 7 7785 CEU:1.0;1.0, CHB:1.0;0.516 LEAD_SNP rs12989701 chr2 127887985 Intergenic 6 ASSOCIATION 21390209 Alzheimer's disease (late onset) 9.52287874528 BIN1 - CYP27C1 FUNCTIONAL_SNP rs6710467 chr2 127889932 Intergenic 5b 1947 CEU:1.0;1.0 FUNCTIONAL_SNP rs13004848 chr2 127887560 Intergenic 5b 425 CEU:1.0;1.0, CHB:1.0;0.659 FUNCTIONAL_SNP rs873270 chr2 127859418 Intron 5b 28567 CEU:1.0;0.939, CHB:1.0;0.659 FUNCTIONAL_SNP rs4663097 chr2 127861906 Intron 5b 26079 CEU:1.0;0.939 LEAD_SNP rs7561528 chr2 127889637 Intergenic 6 ASSOCIATION 21460841 Alzheimer's disease (late onset) 13.3979400087 BIN1 - CYP27C1 FUNCTIONAL_SNP rs11680911 chr2 127888757 Intergenic 5b 880 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;0.843, YRI:1.0;1.0 LEAD_SNP rs744373 chr2 127894615 Intergenic 5b ASSOCIATION 21627779 Alzheimer's disease 8.69897000434 BIN1 - CYP27C1 ASSOCIATION 21460840 Alzheimer's disease 13.5228787453 BIN1 - CYP27C1 ASSOCIATION 21390209 Alzheimer's disease (late onset) 10.0 BIN1 - CYP27C1 FUNCTIONAL_SNP rs11680911 chr2 127888757 Intergenic 5b 5858 CEU:0.952;0.829 LEAD_SNP rs7567389 chr2 127982645 Intergenic 5b ASSOCIATION 20707712 Self-rated health 5.69897000434 CYP27C1 - ERCC3 FUNCTIONAL_SNP rs1504136 chr2 127977118 Intron 4 5527 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 LEAD_SNP rs1799810 chr2 128176040 Coding 4 ASSOCIATION 20707712 Self-rated health 5.04575749056 PROC LEAD_SNP rs1158867 chr2 128177377 Intron 4 ASSOCIATION 20802025 Plasma levels of Protein C 35.3979400087 PROC FUNCTIONAL_SNP rs1799810 chr2 128176040 Coding 4 1337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6753288 chr2 128169899 Intergenic 4 7478 CEU:0.914;0.835, CHB:1.0;0.554, JPT:1.0;0.6, YRI:0.883;0.666 FUNCTIONAL_SNP rs7599210 chr2 128164177 Intergenic 5b 13200 CEU:0.912;0.833, CHB:1.0;0.591, JPT:1.0;0.599, YRI:1.0;0.774 LEAD_SNP rs4662834 chr2 129478842 Intergenic 5b ASSOCIATION 21106707 Bleomycin sensitivity 5.30102999566 ISCA1P6 - RPL22P7 FUNCTIONAL_SNP rs11684311 chr2 129483795 Intergenic 5b 4953 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.94;0.683 FUNCTIONAL_SNP rs12996713 chr2 129483106 Intergenic 7 4264 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.893 FUNCTIONAL_SNP rs6431023 chr2 129476347 Intergenic 7 2495 CEU:1.0;0.92, CHB:0.95;0.86, JPT:1.0;0.952, YRI:1.0;0.74 LEAD_SNP rs10928927 chr2 130468366 Intergenic 5b ASSOCIATION 21685187 Chronic obstructive pulmonary disease 6.52287874528 ISCA1P6 - RPL22P7 LEAD_SNP rs16831128 chr2 133144392 Intergenic 7 ASSOCIATION 20585324 Conduct disorder (case status) 6.39794000867 FAM201B - GPR39 ASSOCIATION 20585324 Conduct disorder (symptom count) 5.30102999566 FAM201B - GPR39 LEAD_SNP rs1437898 chr2 133746630 Intron 7 ASSOCIATION 19010793 Multiple sclerosis (age of onset) 5.09691001301 NCKAP5 LEAD_SNP rs10496702 chr2 134005569 Intron 4 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.15490195999 NCKAP5 FUNCTIONAL_SNP rs13412008 chr2 134044193 Intron 4 38624 CEU:1.0;0.899, CHB:0.803;0.543, JPT:1.0;0.846 FUNCTIONAL_SNP rs10496704 chr2 134044131 Intron 4 38562 CEU:1.0;0.899, JPT:0.842;0.709 FUNCTIONAL_SNP rs1344727 chr2 134046273 Intron 5a 40704 CEU:1.0;0.899, CHB:0.903;0.687, JPT:0.838;0.606 FUNCTIONAL_SNP rs1344728 chr2 134046297 Intron 5a 40728 CEU:1.0;0.89, CHB:0.809;0.599, JPT:0.842;0.709 FUNCTIONAL_SNP rs13399345 chr2 134043024 Intron 6 37455 CEU:1.0;0.899, JPT:0.842;0.709 FUNCTIONAL_SNP rs10185165 chr2 134039468 Intron 6 33899 CEU:1.0;0.865, JPT:0.842;0.709 FUNCTIONAL_SNP rs4057049 chr2 134019065 Intron 6 13496 CEU:1.0;1.0, CHB:1.0;0.551, JPT:1.0;0.673, YRI:0.946;0.564 FUNCTIONAL_SNP rs13399558 chr2 134043215 Intron 7 37646 CEU:1.0;0.899, JPT:0.842;0.709 FUNCTIONAL_SNP rs10170384 chr2 134039314 Intron 7 33745 CEU:1.0;0.899, CHB:0.798;0.636, JPT:0.813;0.559 FUNCTIONAL_SNP rs1430169 chr2 134033487 Intron 7 27918 CEU:1.0;1.0, CHB:0.742;0.551, JPT:1.0;1.0 FUNCTIONAL_SNP rs6744863 chr2 134007358 Intron 7 1789 CEU:1.0;0.866, CHB:1.0;0.91, JPT:1.0;1.0, YRI:0.878;0.543 FUNCTIONAL_SNP rs12464930 chr2 134035153 Intron 7 29584 CEU:1.0;1.0, JPT:1.0;0.864 FUNCTIONAL_SNP rs12469282 chr2 134044781 Intron 7 39212 CEU:1.0;0.899, CHB:0.803;0.543, JPT:1.0;0.846 FUNCTIONAL_SNP rs17800749 chr2 134003754 Intron 7 1815 CEU:1.0;0.815, CHB:1.0;0.588 FUNCTIONAL_SNP rs7603759 chr2 134015208 Intron 7 9639 CEU:1.0;0.8, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs13430905 chr2 134011993 Intron 7 6424 CEU:1.0;1.0, CHB:1.0;0.628, JPT:1.0;0.673 FUNCTIONAL_SNP rs10496703 chr2 134038625 Intron 7 33056 CEU:1.0;0.899, CHB:0.809;0.599, JPT:1.0;0.846 FUNCTIONAL_SNP rs10193871 chr2 134017053 Intron 7 11484 CEU:1.0;1.0, CHB:1.0;0.57, JPT:1.0;0.864 FUNCTIONAL_SNP rs2217428 chr2 133995700 Intron 7 9869 CEU:1.0;1.0, CHB:1.0;0.628 FUNCTIONAL_SNP rs13413333 chr2 134009296 Intron 7 3727 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;0.863 FUNCTIONAL_SNP rs7600871 chr2 134014961 Intron 7 9392 CEU:1.0;1.0, CHB:1.0;0.628, JPT:1.0;0.673 FUNCTIONAL_SNP rs4589811 chr2 134041922 Intron 7 36353 CEU:1.0;0.899, CHB:0.814;0.662, JPT:1.0;0.846 FUNCTIONAL_SNP rs13431418 chr2 134012499 Intron 7 6930 CEU:1.0;1.0, CHB:1.0;0.628, JPT:1.0;0.673 LEAD_SNP rs7577925 chr2 134040519 Intron 7 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.52287874528 NCKAP5 FUNCTIONAL_SNP rs1367207 chr2 134035868 Intron 7 4651 CEU:1.0;0.957, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.858 LEAD_SNP rs6710823 chr2 135592381 Intergenic 6 ASSOCIATION 21292315 Parkinson's disease 8.15490195999 TMEM163 - ACMSD LEAD_SNP rs882300 chr2 136976255 Intergenic 6 ASSOCIATION 19525953 Multiple sclerosis 7.0 CXCR4 - UBBP1 ASSOCIATION 17903306 Electrocardiographic traits 6.52287874528 CXCR4 - UBBP1 FUNCTIONAL_SNP rs1519523 chr2 136934449 Intergenic 4 41806 CEU:1.0;0.961, CHB:1.0;0.897, JPT:1.0;0.91, YRI:1.0;0.835 FUNCTIONAL_SNP rs1519528 chr2 136973781 Intergenic 4 2474 CEU:1.0;0.962, CHB:1.0;0.897, JPT:1.0;0.91, YRI:1.0;0.835 FUNCTIONAL_SNP rs11692725 chr2 136929883 Intergenic 5b 46372 CEU:1.0;0.962, CHB:1.0;0.895, JPT:1.0;0.91, YRI:1.0;0.834 LEAD_SNP rs4452212 chr2 137015991 Intergenic 7 ASSOCIATION 20421499 Telomere length 5.69897000434 CXCR4 - UBBP1 FUNCTIONAL_SNP rs4072435 chr2 137013901 Intergenic 2b 2090 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs6430612 chr2 137006198 Intergenic 5a 9793 CEU:1.0;1.0 FUNCTIONAL_SNP rs10221893 chr2 137013606 Intergenic 5b 2385 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs13018756 chr2 137008235 Intergenic 7 7756 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12691881 chr2 137029668 Intergenic 7 13677 CEU:1.0;1.0, CHB:1.0;0.659 FUNCTIONAL_SNP rs13024450 chr2 137014611 Intergenic 7 1380 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs13004902 chr2 137027680 Intergenic 7 11689 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs934299 chr2 137338940 Intergenic 7 ASSOCIATION 17903297 Cognitive test performance 5.04575749056 UBBP1 - THSD7B FUNCTIONAL_SNP rs1863808 chr2 137334985 Intergenic 7 3955 CEU:1.0;0.899, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs934298 chr2 137338721 Intergenic 7 219 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 LEAD_SNP rs1427593 chr2 137555224 Intron 6 ASSOCIATION 20686608 Pancreatic cancer 5.15490195999 UBBP1 - THSD7B FUNCTIONAL_SNP rs2710190 chr2 137554697 Intron 6 527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2433920 chr2 137555967 Intron 7 743 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1399645 chr2 140147832 Intergenic 7 ASSOCIATION 19478329 Male infertility 6.04575749056 NXPH2 - MRPS18BP2 LEAD_SNP rs491391 chr2 141362058 Intron 5b ASSOCIATION 20395239 Optic disc size (disc) 6.52287874528 LRP1B FUNCTIONAL_SNP rs6723181 chr2 141348340 Intron 6 13718 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.617 FUNCTIONAL_SNP rs492190 chr2 141355107 Intron 6 6951 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10188432 chr2 141334402 Intron 7 27656 CEU:1.0;0.825, CHB:1.0;1.0 FUNCTIONAL_SNP rs503742 chr2 141364821 Intron 7 2763 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.947 LEAD_SNP rs12474609 chr2 141721142 Intron 7 ASSOCIATION 19367585 Aging 8.22184874962 LRP1B FUNCTIONAL_SNP rs12614115 chr2 141721503 Intron 6 361 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10928081 chr2 141720640 Intron 7 502 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs10928082 chr2 141721159 Intron 7 17 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10210358 chr2 141795620 Intron 7 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.69897000434 LRP1B LEAD_SNP rs12472911 chr2 142228509 Intron 7 ASSOCIATION 21102462 Menarche (age at onset) 6.69897000434 LRP1B FUNCTIONAL_SNP rs6429884 chr2 142225328 Intron 5b 3181 CEU:1.0;0.803, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12618990 chr2 142228325 Intron 5b 184 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3936045 chr2 142227759 Intron 5b 750 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6733988 chr2 142226768 Intron 6 1741 CEU:1.0;0.86, CHB:1.0;1.0, JPT:1.0;0.87, YRI:1.0;0.932 FUNCTIONAL_SNP rs3935991 chr2 142227124 Intron 7 1385 CEU:1.0;0.803, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12464897 chr2 142228672 Intron 7 163 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3936044 chr2 142228111 Intron 7 398 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2890652 chr2 142959931 Intergenic 7 ASSOCIATION 20935630 Body mass index 10.0 RPS16P3 - KYNU FUNCTIONAL_SNP rs2121279 chr2 143043285 Intergenic 5b 83354 CEU:1.0;0.847 FUNCTIONAL_SNP rs17835238 chr2 143043035 Intergenic 6 83104 CEU:1.0;0.848 LEAD_SNP rs10928195 chr2 144428608 Intron 6 ASSOCIATION 19197348 Quantitative traits 5.39794000867 ARHGAP15 LEAD_SNP rs10427255 chr2 146125523 Intergenic 7 ASSOCIATION 20585627 Common traits (Other) 11.0 RPL6P5 - RNU7-2P FUNCTIONAL_SNP rs1516135 chr2 146131844 Intergenic 3a 6321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs13009175 chr2 146122936 Intergenic 5a 2587 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.826 FUNCTIONAL_SNP rs961414 chr2 146113733 Intergenic 5b 11790 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.617 FUNCTIONAL_SNP rs1949331 chr2 146127622 Intergenic 5b 2099 CEU:1.0;0.821, CHB:1.0;0.681, JPT:1.0;0.642 FUNCTIONAL_SNP rs7571606 chr2 146123058 Intergenic 6 2465 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs34338764 chr2 146146452 Intergenic 6 20929 CEU:1.0;0.924 FUNCTIONAL_SNP rs6721116 chr2 146156197 Intergenic 6 30674 CEU:1.0;0.924 FUNCTIONAL_SNP rs4422110 chr2 146114898 Intergenic 6 10625 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.598 FUNCTIONAL_SNP rs1516141 chr2 146152388 Intergenic 6 26865 CEU:1.0;0.924, YRI:0.768;0.569 FUNCTIONAL_SNP rs1533426 chr2 146119018 Intergenic 6 6505 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6430080 chr2 146119647 Intergenic 7 5876 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10211099 chr2 146138909 Intergenic 7 13386 CEU:1.0;0.821, CHB:1.0;0.681, JPT:1.0;0.642 FUNCTIONAL_SNP rs1040173 chr2 146120511 Intergenic 7 5012 CEU:1.0;0.821, CHB:1.0;0.706, JPT:1.0;0.642 FUNCTIONAL_SNP rs13034670 chr2 146122551 Intergenic 7 2972 CEU:1.0;0.821, CHB:1.0;0.681, JPT:1.0;0.642 FUNCTIONAL_SNP rs10204857 chr2 146154475 Intergenic 7 28952 CEU:1.0;0.924, YRI:0.768;0.569 FUNCTIONAL_SNP rs1516136 chr2 146129223 Intergenic 7 3700 CEU:1.0;0.821, CHB:1.0;0.681, JPT:1.0;0.642 FUNCTIONAL_SNP rs2063862 chr2 146145333 Intergenic 7 19810 CEU:1.0;0.924, YRI:0.768;0.569 FUNCTIONAL_SNP rs1996286 chr2 146133472 Intergenic 7 7949 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 LEAD_SNP rs10928302 chr2 147372024 Intergenic 5a ASSOCIATION 20041166 HIV-1 control 5.09691001301 PABPC1P2 - RPL26P14 FUNCTIONAL_SNP rs11888694 chr2 213101319 Intron 6 65729295 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.522 FUNCTIONAL_SNP rs6707771 chr2 147369819 Intergenic 6 2205 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.522 FUNCTIONAL_SNP rs11895389 chr2 147366942 Intergenic 6 5082 CEU:1.0;1.0, CHB:0.874;0.516, JPT:1.0;0.61, YRI:1.0;1.0 FUNCTIONAL_SNP rs6739325 chr2 147398530 Intergenic 6 26506 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12617086 chr2 147368035 Intergenic 6 3989 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0 FUNCTIONAL_SNP rs7559942 chr2 147415821 Intergenic 7 43797 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.543 FUNCTIONAL_SNP rs7591307 chr2 147389019 Intergenic 7 16995 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10928303 chr2 147380204 Intergenic 7 8180 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10928304 chr2 147380400 Intergenic 7 8376 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12329018 chr2 214221459 Intron 7 66849435 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs6720072 chr2 147365709 Intergenic 7 6315 CEU:1.0;1.0, CHB:0.893;0.565, JPT:1.0;0.626, YRI:1.0;1.0 FUNCTIONAL_SNP rs7579221 chr2 147385255 Intergenic 7 13231 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12475739 chr2 147383718 Intergenic 7 11694 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12328053 chr2 147416456 Intergenic 7 44432 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;0.55 FUNCTIONAL_SNP rs4662263 chr2 147422813 Intergenic 7 50789 CEU:1.0;1.0, CHB:1.0;0.863, JPT:0.929;0.808 LEAD_SNP rs7584099 chr2 148478336 Intergenic 6 ASSOCIATION 20339536 Response to statin therapy 6.30102999566 PABPC1P2 - RPL26P14 FUNCTIONAL_SNP rs1406449 chr2 148495285 Intergenic 5b 16949 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.909, YRI:1.0;1.0 FUNCTIONAL_SNP rs6735022 chr2 148471406 Intergenic 6 6930 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2222781 chr2 148511230 Intergenic 6 32894 CEU:0.959;0.885, CHB:1.0;0.954, JPT:1.0;0.909, YRI:0.903;0.744 FUNCTIONAL_SNP rs4502361 chr2 148496105 Intergenic 6 17769 CEU:1.0;0.921, CHB:1.0;0.954, JPT:1.0;0.909, YRI:1.0;0.909 FUNCTIONAL_SNP rs4662545 chr2 148479918 Intergenic 7 1582 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2382109 chr2 148507898 Intergenic 7 29562 CEU:0.959;0.885, CHB:1.0;0.954, JPT:1.0;0.907, YRI:0.903;0.744 FUNCTIONAL_SNP rs11687308 chr2 148504840 Intergenic 7 26504 CEU:0.959;0.884, CHB:1.0;0.954, JPT:1.0;0.909, YRI:1.0;0.909 FUNCTIONAL_SNP rs1881570 chr2 148481765 Intergenic 7 3429 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17678220 chr2 148480425 Intergenic 7 2089 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4662549 chr2 148512171 Intergenic 7 33835 CEU:0.959;0.882, CHB:1.0;0.954, JPT:1.0;0.907 LEAD_SNP rs10191411 chr2 149387968 Intergenic 6 ASSOCIATION 18464913 Protein quantitative trait loci 5.39794000867 RPS29P8 - EPC2 LEAD_SNP rs2121433 chr2 149557860 Intergenic 5b ASSOCIATION 21123754 Alzheimer's disease biomarkers 6.0 EPC2 - UBBP3 FUNCTIONAL_SNP rs1374441 chr2 149558625 Intergenic 5a 765 CEU:1.0;0.821 FUNCTIONAL_SNP rs1120289 chr2 149560615 Intergenic 5b 2755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.909 FUNCTIONAL_SNP rs2121434 chr2 149557825 Intergenic 5b 35 CEU:1.0;0.864 FUNCTIONAL_SNP rs6710423 chr2 149558825 Intergenic 6 965 CEU:1.0;0.864 FUNCTIONAL_SNP rs11894791 chr2 149554621 Intergenic 7 3239 CEU:1.0;0.948, JPT:1.0;0.634, YRI:1.0;1.0 FUNCTIONAL_SNP rs1120288 chr2 149560796 Intergenic 7 2936 CEU:1.0;0.821 FUNCTIONAL_SNP rs4284769 chr2 149561512 Intergenic 7 3652 CEU:1.0;0.864 LEAD_SNP rs4499362 chr2 149568396 Intergenic 7 ASSOCIATION 21123754 Alzheimer's disease biomarkers 6.0 EPC2 - UBBP3 FUNCTIONAL_SNP rs2121434 chr2 149557825 Intergenic 5b 10571 CEU:0.899;0.808, JPT:1.0;0.667 FUNCTIONAL_SNP rs6710423 chr2 149558825 Intergenic 6 9571 CEU:0.899;0.808, JPT:1.0;0.735 FUNCTIONAL_SNP rs4284769 chr2 149561512 Intergenic 7 6884 CEU:0.899;0.808, JPT:1.0;0.735 LEAD_SNP rs11889862 chr2 150697148 Intron 6 ASSOCIATION 19448619 Menopause (age at onset) 5.69897000434 LOC642340 LEAD_SNP rs6716455 chr2 151126403 Intron 5b ASSOCIATION 21529783 Alcoholism (alcohol dependence factor score) 5.04575749056 MMADHC - TRNAE38P ASSOCIATION 21529783 Alcoholism (alcohol use disorder factor score) 6.15490195999 MMADHC - TRNAE38P FUNCTIONAL_SNP rs10190378 chr2 151131188 Intron 7 4785 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6756972 chr2 151104367 Intron 7 22036 CEU:1.0;0.913, JPT:1.0;0.564 LEAD_SNP rs958672 chr2 155070567 Intron 7 ASSOCIATION 17903295 Aging traits 5.69897000434 GALNT13 LEAD_SNP rs707040 chr2 155226677 Intron 7 ASSOCIATION 21658281 Sudden cardiac arrest 5.22184874962 GALNT13 ASSOCIATION 21658281 Sudden cardiac arrest 5.22184874962 GALNT13 FUNCTIONAL_SNP rs12611482 chr2 155258944 Intron 4 32267 CEU:1.0;0.817, CHB:1.0;0.579 FUNCTIONAL_SNP rs2037660 chr2 155232409 Intron 4 5732 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.741 FUNCTIONAL_SNP rs799790 chr2 155239635 Intron 4 12958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.834;0.6 FUNCTIONAL_SNP rs799795 chr2 155242667 Intron 5a 15990 CEU:1.0;1.0, CHB:0.882;0.67, JPT:1.0;0.85 FUNCTIONAL_SNP rs1991081 chr2 155270131 Intron 6 43454 CEU:1.0;0.947, CHB:1.0;0.552 FUNCTIONAL_SNP rs10210987 chr2 155233967 Intron 6 7290 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.741 FUNCTIONAL_SNP rs775343 chr2 155245261 Intron 6 18584 CEU:1.0;1.0, CHB:1.0;0.519 FUNCTIONAL_SNP rs799793 chr2 155241841 Intron 6 15164 CEU:1.0;1.0, CHB:1.0;0.775, JPT:1.0;0.857, YRI:0.822;0.521 FUNCTIONAL_SNP rs799803 chr2 155253314 Intron 6 26637 CEU:1.0;0.846, CHB:1.0;0.552 FUNCTIONAL_SNP rs799804 chr2 155254262 Intron 6 27585 CEU:1.0;0.846, CHB:1.0;0.552 FUNCTIONAL_SNP rs12612408 chr2 155273228 Intron 6 46551 CEU:0.941;0.885, JPT:0.933;0.61 FUNCTIONAL_SNP rs707043 chr2 155243685 Intron 6 17008 CEU:1.0;1.0, CHB:1.0;0.552 FUNCTIONAL_SNP rs707044 chr2 155245509 Intron 6 18832 CEU:1.0;1.0, CHB:1.0;0.552 FUNCTIONAL_SNP rs799740 chr2 155255672 Intron 6 28995 CEU:1.0;0.845, CHB:1.0;0.6 FUNCTIONAL_SNP rs799744 chr2 155255955 Intron 7 29278 CEU:1.0;0.846, CHB:1.0;0.552 FUNCTIONAL_SNP rs799745 chr2 155255980 Intron 7 29303 CEU:1.0;0.846, CHB:1.0;0.552 FUNCTIONAL_SNP rs799746 chr2 155256014 Intron 7 29337 CEU:1.0;0.835, CHB:1.0;0.552 FUNCTIONAL_SNP rs799750 chr2 155257038 Intron 7 30361 CEU:1.0;0.846, CHB:1.0;0.552 FUNCTIONAL_SNP rs2177672 chr2 155232079 Intron 7 5402 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs6760854 chr2 155235144 Intron 7 8467 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.793;0.563 FUNCTIONAL_SNP rs2037663 chr2 155231057 Intron 7 4380 CEU:1.0;0.846, CHB:1.0;0.857, JPT:1.0;0.857, YRI:1.0;0.66 FUNCTIONAL_SNP rs10175148 chr2 155215213 Intron 7 11464 CEU:1.0;0.949, CHB:0.933;0.64, JPT:1.0;0.651 FUNCTIONAL_SNP rs799792 chr2 155239780 Intron 7 13103 CEU:1.0;0.943, CHB:1.0;0.949, JPT:1.0;0.771, YRI:0.867;0.62 FUNCTIONAL_SNP rs2882047 chr2 155235000 Intron 7 8323 CEU:1.0;1.0, CHB:1.0;0.86, JPT:1.0;0.812, YRI:0.871;0.63 FUNCTIONAL_SNP rs799801 chr2 155252077 Intron 7 25400 CEU:1.0;0.815, CHB:1.0;0.536, YRI:0.756;0.522 FUNCTIONAL_SNP rs1154759 chr2 155236334 Intron 7 9657 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;0.903, YRI:0.79;0.578 FUNCTIONAL_SNP rs725585 chr2 155269790 Intron 7 43113 CEU:1.0;0.947, CHB:1.0;0.552 FUNCTIONAL_SNP rs879705 chr2 155264111 Intron 7 37434 CEU:1.0;0.841, CHB:1.0;0.552 FUNCTIONAL_SNP rs12617950 chr2 155234278 Intron 7 7601 CEU:1.0;0.845, CHB:1.0;0.86, JPT:1.0;0.805, YRI:1.0;0.704 FUNCTIONAL_SNP rs719461 chr2 155230619 Intron 7 3942 CEU:1.0;0.846, CHB:1.0;0.86, JPT:1.0;0.857, YRI:1.0;0.741 FUNCTIONAL_SNP rs707046 chr2 155246109 Intron 7 19432 CEU:1.0;1.0, CHB:1.0;0.552 FUNCTIONAL_SNP rs707048 chr2 155247355 Intron 7 20678 CEU:1.0;0.846, CHB:1.0;0.552 FUNCTIONAL_SNP rs707049 chr2 155247371 Intron 7 20694 CEU:1.0;0.845, CHB:1.0;0.552 FUNCTIONAL_SNP rs1405936 chr2 155265623 Intron 7 38946 CEU:1.0;0.947, CHB:1.0;0.552 FUNCTIONAL_SNP rs799739 chr2 155255403 Intron 7 28726 CEU:1.0;0.841, CHB:1.0;0.552 FUNCTIONAL_SNP rs799741 chr2 155255746 Intron 7 29069 CEU:1.0;0.841, CHB:1.0;0.573 FUNCTIONAL_SNP rs799742 chr2 155255929 Intron 7 29252 CEU:1.0;0.846, CHB:1.0;0.552 FUNCTIONAL_SNP rs799743 chr2 155255948 Intron 7 29271 CEU:1.0;0.84, CHB:1.0;0.593 LEAD_SNP rs1918172 chr2 156888500 Intergenic 7 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.30102999566 ATP5A1P2 - NR4A2 FUNCTIONAL_SNP rs1534260 chr2 156894544 Intergenic 7 6044 CEU:1.0;0.866, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs16839962 chr2 156925286 Intergenic 6 ASSOCIATION 20339536 Response to statin therapy 5.04575749056 ATP5A1P2 - NR4A2 LEAD_SNP rs17188434 chr2 157096776 Intergenic 7 ASSOCIATION 21102462 Menarche (age at onset) 9.0 ATP5A1P2 - NR4A2 FUNCTIONAL_SNP rs17247108 chr2 157020734 Intergenic 6 76042 CEU:1.0;0.825 FUNCTIONAL_SNP rs17195587 chr2 157157887 Intergenic 7 61111 CEU:1.0;1.0 FUNCTIONAL_SNP rs13410664 chr2 157106683 Intergenic 7 9907 CEU:1.0;1.0 FUNCTIONAL_SNP rs17187538 chr2 157021763 Intergenic 7 75013 CEU:1.0;0.825 FUNCTIONAL_SNP rs10497170 chr2 156995930 Intergenic 7 100846 CEU:1.0;0.825 FUNCTIONAL_SNP rs4369815 chr2 157126964 Intergenic 7 30188 CEU:1.0;1.0 LEAD_SNP rs7601713 chr2 157552860 Intergenic 7 ASSOCIATION 20031603 QT interval 5.69897000434 GPD2 - RPLP0P7 LEAD_SNP rs10183640 chr2 158780204 Intergenic 3a ASSOCIATION 21658281 Sudden cardiac arrest 6.30102999566 ACVR1 - UPP2 FUNCTIONAL_SNP rs10168822 chr2 158780690 Intergenic 5a 486 CEU:0.958;0.882, CHB:0.897;0.767, JPT:0.94;0.754 LEAD_SNP rs2074955 chr2 158977794 Intron 7 ASSOCIATION 20932310 P-tau181p 7.0 UPP2 LEAD_SNP rs13022357 chr2 160069756 Intron 5b ASSOCIATION 21658281 Sudden cardiac arrest 6.0 TANC1 FUNCTIONAL_SNP rs3821301 chr2 160087535 Exon,non-coding 6 17779 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.904;0.618 FUNCTIONAL_SNP rs12692544 chr2 160082354 Intron 4 12598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.902;0.592 FUNCTIONAL_SNP rs2288111 chr2 160084534 Intron 5b 14778 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.904;0.618 FUNCTIONAL_SNP rs2042494 chr2 160084224 Intron 5b 14468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.91;0.703 FUNCTIONAL_SNP rs2042495 chr2 160084263 Intron 6 14507 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.904;0.618 LEAD_SNP rs4665058 chr2 160190209 Intron 7 ASSOCIATION 21738491 Sudden cardiac arrest 9.69897000434 BAZ2B FUNCTIONAL_SNP rs3815475 chr2 160114315 Coding 7 75894 CEU:1.0;1.0 FUNCTIONAL_SNP rs11903200 chr2 160076309 Coding 7 113900 CEU:1.0;1.0 FUNCTIONAL_SNP rs10490003 chr2 160082890 Intron 4 107319 CEU:1.0;1.0 FUNCTIONAL_SNP rs10189317 chr2 160123107 Intron 5b 67102 CEU:1.0;1.0 FUNCTIONAL_SNP rs2159872 chr2 160178332 Intron 7 11877 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8179587 chr2 160187589 Intron 7 2620 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10490004 chr2 160076140 Intron 7 114069 CEU:1.0;1.0 FUNCTIONAL_SNP rs174230 chr2 160175310 Intergenic 7 14899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.912;0.659 FUNCTIONAL_SNP rs17604548 chr2 160076576 Intron 7 113633 CEU:1.0;1.0 FUNCTIONAL_SNP rs13416694 chr2 160075711 Intron 7 114498 CEU:1.0;1.0 FUNCTIONAL_SNP rs10515928 chr2 160074899 Intron 7 115310 CEU:1.0;1.0 FUNCTIONAL_SNP rs10490005 chr2 160075645 Intron 7 114564 CEU:1.0;1.0 FUNCTIONAL_SNP rs17604955 chr2 160169497 Intergenic 7 20712 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7559010 chr2 160193992 Intron 7 3783 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9287785 chr2 160075009 Intron 7 115200 CEU:1.0;1.0 FUNCTIONAL_SNP rs2241023 chr2 160081336 Intron 7 108873 CEU:1.0;1.0 LEAD_SNP rs4664308 chr2 160917497 Intron 5b ASSOCIATION 21323541 Nephropathy (idiopathic membranous) 28.0457574906 PLA2R1 FUNCTIONAL_SNP rs2305818 chr2 161029218 Coding 6 111721 CEU:0.959;0.883, CHB:0.872;0.716, JPT:1.0;0.901, YRI:1.0;1.0 FUNCTIONAL_SNP rs4665162 chr2 161060184 Intron 5a 142687 CEU:0.957;0.846, CHB:0.872;0.716, JPT:1.0;0.901, YRI:1.0;1.0 FUNCTIONAL_SNP rs6707458 chr2 160914540 Intron 5b 2957 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2198918 chr2 161015052 Intron 5b 97555 CEU:0.954;0.87, CHB:0.872;0.716, JPT:1.0;0.901 FUNCTIONAL_SNP rs2124969 chr2 160989486 Intron 5b 71989 CEU:1.0;0.915, CHB:1.0;0.76, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs4665147 chr2 160917062 Intron 5b 435 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6719686 chr2 160908292 Intron 5b 9205 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17831161 chr2 160909360 Intron 5b 8137 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs925410 chr2 160912652 Intron 5b 4845 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17831251 chr2 160914156 Intron 5b 3341 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16844715 chr2 160915106 Intron 6 2391 CEU:1.0;1.0, CHB:1.0;0.798, JPT:1.0;0.708, YRI:1.0;1.0 FUNCTIONAL_SNP rs877200 chr2 160903723 Intron 7 13774 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0 FUNCTIONAL_SNP rs1870102 chr2 161070582 Intron 7 153085 CEU:0.957;0.846, CHB:0.929;0.716, JPT:1.0;0.855, YRI:1.0;1.0 FUNCTIONAL_SNP rs17831191 chr2 160911332 Intron 7 6165 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6759836 chr2 160912802 Intron 7 4695 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6739867 chr2 160942818 Intergenic 7 25321 CEU:1.0;0.96, CHB:1.0;0.777, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs17218566 chr2 161054748 Intron 7 137251 CEU:0.957;0.846, CHB:0.872;0.716, JPT:1.0;0.901, YRI:1.0;1.0 FUNCTIONAL_SNP rs10929965 chr2 160906931 Intron 7 10566 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2175416 chr2 160904021 Intron 7 13476 CEU:1.0;1.0, CHB:1.0;0.932, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4292050 chr2 160940899 Intergenic 7 23402 CEU:1.0;0.96, CHB:1.0;0.777, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs17341301 chr2 160902420 Intron 7 15077 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.95 FUNCTIONAL_SNP rs17216980 chr2 160960932 Intron 7 43435 CEU:1.0;0.961, CHB:1.0;0.777, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs6731260 chr2 160977769 Intron 7 60272 CEU:1.0;0.961, CHB:1.0;0.777, JPT:1.0;0.95, YRI:1.0;1.0 LEAD_SNP rs7593730 chr2 161171454 Intron 6 ASSOCIATION 20418489 Type 2 diabetes 7.39794000867 RBMS1 FUNCTIONAL_SNP rs10929982 chr2 161236277 Intron 2b 64823 CEU:1.0;0.879, CHB:0.906;0.752, JPT:1.0;0.897, YRI:0.804;0.6 FUNCTIONAL_SNP rs11693602 chr2 161224658 Intron 4 53204 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.926 FUNCTIONAL_SNP rs10929981 chr2 161233795 Intron 4 62341 CEU:1.0;0.879, CHB:1.0;0.834, JPT:1.0;0.897, YRI:0.804;0.6 FUNCTIONAL_SNP rs9287795 chr2 161209788 Intron 4 38334 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.825 FUNCTIONAL_SNP rs12476804 chr2 161194255 Intron 5a 22801 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.862 FUNCTIONAL_SNP rs10209870 chr2 161192545 Intron 5a 21091 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs4410242 chr2 161192070 Intron 5b 20616 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4077463 chr2 161166234 Intron 5b 5220 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs4277476 chr2 161219181 Intron 5b 47727 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4589705 chr2 161176136 Intron 6 4682 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12692592 chr2 161163381 Intron 6 8073 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs6718526 chr2 161214175 Intron 6 42721 CEU:1.0;0.879, CHB:1.0;0.833, JPT:1.0;0.896 FUNCTIONAL_SNP rs6730051 chr2 161216721 Intron 6 45267 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.925 FUNCTIONAL_SNP rs6724146 chr2 161210655 Intron 7 39201 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.926 FUNCTIONAL_SNP rs1110209 chr2 161199498 Intron 7 28044 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12622664 chr2 161179356 Intron 7 7902 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12465609 chr2 161179485 Intron 7 8031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.556 FUNCTIONAL_SNP rs10168504 chr2 161202588 Intron 7 31134 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.857 FUNCTIONAL_SNP rs10929978 chr2 161169956 Intron 7 1498 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs6718070 chr2 161170153 Intron 7 1301 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 LEAD_SNP rs10192369 chr2 161380888 Intergenic 6 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 5.04575749056 RBMS1 - TANK LEAD_SNP rs2270447 chr2 162959748 Intergenic 7 ASSOCIATION 20585627 Common traits (Other) 6.09691001301 EIF3EP2 - GCG FUNCTIONAL_SNP rs12233178 chr2 162952825 Intergenic 7 6923 CEU:1.0;0.848, CHB:0.859;0.617, JPT:1.0;0.652 LEAD_SNP rs1990760 chr2 163124051 Coding 6 ASSOCIATION 20694011 Immunoglobulin A 9.15490195999 IFIH1 ASSOCIATION 19430480 Type 1 diabetes 8.15490195999 IFIH1 ASSOCIATION 17554260 Type 1 diabetes 10.6989700043 IFIH1 LEAD_SNP rs17716942 chr2 163260691 Intron 5b ASSOCIATION 20953190 Psoriasis 13.0 KCNH7 LEAD_SNP rs12476047 chr2 164317876 Intergenic 7 ASSOCIATION 19680635 Response to antipsychotic treatment 5.52287874528 KCNH7 - FIGN LEAD_SNP rs16849225 chr2 164906820 Intron 5b ASSOCIATION 21572416 Blood pressure 10.3979400087 FIGN - GRB14 LEAD_SNP rs10195252 chr2 165513091 Intergenic 7 ASSOCIATION 20935629 Waist-hip ratio 33.3979400087 GRB14 - COBLL1 FUNCTIONAL_SNP rs6717858 chr2 165539661 Exon,non-coding 6 26570 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6713419 chr2 165508300 Intergenic 4 4791 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs10184004 chr2 165508389 Intergenic 5a 4702 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10179126 chr2 165511794 Intergenic 5b 1297 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs1128249 chr2 165528624 Intergenic 5b 15533 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12692735 chr2 165504565 Intergenic 5b 8526 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs6752978 chr2 165552942 Intron 6 39851 CEU:0.914;0.801, CHB:1.0;0.572, JPT:1.0;1.0, YRI:1.0;0.642 FUNCTIONAL_SNP rs3923113 chr2 165501849 Intergenic 7 11242 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;0.696, YRI:0.934;0.772 FUNCTIONAL_SNP rs13389219 chr2 165528876 Intergenic 7 15785 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6738627 chr2 165544450 Intron 7 31359 CEU:0.954;0.8, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs7609045 chr2 165555207 Intron 7 42116 CEU:0.914;0.801, CHB:1.0;0.572, JPT:1.0;1.0, YRI:1.0;0.642 FUNCTIONAL_SNP rs7592412 chr2 165526338 Intergenic 7 13247 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs13432797 chr2 165526587 Intergenic 7 13496 CEU:1.0;0.884, CHB:1.0;0.806, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs6754919 chr2 165507843 Intergenic 7 5248 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs10930133 chr2 165506724 Intergenic 7 6367 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.828 LEAD_SNP rs10221833 chr2 165577164 Intron 5b ASSOCIATION 20339536 Response to statin therapy 5.22184874962 COBLL1 FUNCTIONAL_SNP rs13410987 chr2 165580775 Intron 5a 3611 CEU:1.0;0.917, YRI:0.928;0.803 FUNCTIONAL_SNP rs355793 chr2 165658890 Intron 5b 81726 CEU:1.0;0.862, YRI:0.924;0.591 FUNCTIONAL_SNP rs355847 chr2 165624815 Intron 7 47651 CEU:1.0;1.0, YRI:1.0;0.644 FUNCTIONAL_SNP rs355849 chr2 165625830 Intron 7 48666 CEU:1.0;1.0, YRI:1.0;0.644 FUNCTIONAL_SNP rs427059 chr2 165606954 Intron 7 29790 CEU:1.0;1.0, YRI:1.0;0.644 FUNCTIONAL_SNP rs10178921 chr2 165603512 Intron 7 26348 CEU:1.0;1.0, YRI:1.0;0.644 FUNCTIONAL_SNP rs355829 chr2 165616315 Intron 7 39151 CEU:1.0;1.0, YRI:0.921;0.576 LEAD_SNP rs13424957 chr2 165750390 Intergenic 7 ASSOCIATION 21347282 Coronary heart disease 5.52287874528 COBLL1 - SLC38A11 LEAD_SNP rs776488 chr2 165890733 Intron 7 ASSOCIATION 20585627 Common traits (Other) 6.69897000434 SLC38A11 - SCN3A LEAD_SNP rs6710518 chr2 166583244 Intergenic 7 ASSOCIATION 21533022 Bone mineral density 9.30102999566 CSRNP3 - GALNT3 FUNCTIONAL_SNP rs777346 chr2 166535918 Coding 7 47326 CEU:1.0;0.96, CHB:0.933;0.731, JPT:0.92;0.619 FUNCTIONAL_SNP rs2194754 chr2 166539042 Exon,non-coding 7 44202 CEU:0.957;0.846, CHB:0.939;0.789, JPT:0.92;0.619 FUNCTIONAL_SNP rs13429321 chr2 166605010 Exon,non-coding 6 21766 CEU:1.0;0.818, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1968294 chr2 166618262 Intron 4 35018 CEU:1.0;0.887, CHB:1.0;0.843, JPT:0.925;0.747 FUNCTIONAL_SNP rs12185748 chr2 166576956 Intergenic 5b 6288 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs1895701 chr2 166603087 Intergenic 5b 19843 CEU:1.0;0.923, CHB:1.0;0.946, JPT:1.0;0.775 FUNCTIONAL_SNP rs13431319 chr2 166614577 Intron 5b 31333 CEU:0.956;0.811, CHB:1.0;0.946, JPT:1.0;0.823 FUNCTIONAL_SNP rs6726821 chr2 166578114 Intergenic 5b 5130 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs7586085 chr2 166577489 Intergenic 5b 5755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs777355 chr2 166554037 Intergenic 6 29207 CEU:1.0;1.0, CHB:1.0;0.844, JPT:0.922;0.66 FUNCTIONAL_SNP rs3791848 chr2 166613243 Intron 6 29999 CEU:1.0;0.811, CHB:1.0;0.942, JPT:1.0;0.807 FUNCTIONAL_SNP rs11686403 chr2 166606993 Intron 7 23749 CEU:1.0;0.815, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs13422985 chr2 166620636 Intron 7 37392 CEU:1.0;0.815, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs1863196 chr2 166557510 Intergenic 7 25734 CEU:1.0;0.921, CHB:1.0;0.844, JPT:0.931;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs2303393 chr2 166605800 Intron 7 22556 CEU:1.0;0.815, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2303394 chr2 166605927 Intron 7 22683 CEU:1.0;0.812, CHB:1.0;0.944, JPT:1.0;1.0, YRI:1.0;0.922 FUNCTIONAL_SNP rs4667835 chr2 166615555 Intron 7 32311 CEU:1.0;0.882, CHB:1.0;0.944, JPT:1.0;0.816 FUNCTIONAL_SNP rs13430211 chr2 166622598 Intron 7 39354 CEU:1.0;0.887, CHB:1.0;0.844, JPT:1.0;0.933, YRI:1.0;1.0 FUNCTIONAL_SNP rs1346003 chr2 166597357 Intergenic 7 14113 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs1346004 chr2 166601046 Intergenic 7 17802 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.86;0.74 FUNCTIONAL_SNP rs6710388 chr2 166583141 Intergenic 7 103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3762552 chr2 166614779 Intron 7 31535 CEU:1.0;0.815, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13427924 chr2 166607746 Intron 7 24502 CEU:1.0;0.815, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;0.875 LEAD_SNP rs13015447 chr2 167377978 Intergenic 7 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 5.15490195999 SCN7A - XIRP2 LEAD_SNP rs6749447 chr2 169041386 Intron 5b ASSOCIATION 19114657 Blood pressure 6.69897000434 STK39 LEAD_SNP rs2102808 chr2 169117025 Intergenic 7 ASSOCIATION 21292315 Parkinson's disease 9.39794000867 PHF5GP - LASS6 LEAD_SNP rs13393173 chr2 169389091 Intron 7 ASSOCIATION 18615156 Response to TNF antagonist treatment 5.39794000867 LASS6 LEAD_SNP rs1402837 chr2 169757354 Intron 7 ASSOCIATION 19096518 Glycated hemoglobin levels 9.30102999566 G6PC2 LEAD_SNP rs560887 chr2 169763148 Intron 7 ASSOCIATION 20081858 Fasting glucose-related traits 217.045757491 G6PC2 ASSOCIATION 20081858 Fasting glucose-related traits 65.6989700043 G6PC2 ASSOCIATION 19060910 Other metabolic traits 9.22184874962 G6PC2 ASSOCIATION 19060907 Fasting plasma glucose 57.0 G6PC2 ASSOCIATION 18451265 Fasting plasma glucose 22.3979400087 G6PC2 FUNCTIONAL_SNP rs13431652 chr2 169753415 Intron 5b 9733 CEU:0.953;0.907 FUNCTIONAL_SNP rs573225 chr2 169757541 Intron 6 5607 CEU:1.0;0.954 LEAD_SNP rs563694 chr2 169774071 Intergenic 7 ASSOCIATION 18521185 Fasting plasma glucose 6.39794000867 G6PC2 - ABCB11 FUNCTIONAL_SNP rs537183 chr2 169774646 Intergenic 7 575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs569805 chr2 169782880 Intron 5a ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 7.04575749056 ABCB11 FUNCTIONAL_SNP rs484066 chr2 169782481 Intron 4 399 CEU:1.0;0.956 FUNCTIONAL_SNP rs579060 chr2 169783039 Intron 5a 159 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs552976 chr2 169791438 Intron 5b 8558 CEU:1.0;1.0 FUNCTIONAL_SNP rs853789 chr2 169801488 Intron 6 18608 CEU:1.0;0.951 FUNCTIONAL_SNP rs557462 chr2 169777595 Intergenic 7 5285 CEU:1.0;1.0 FUNCTIONAL_SNP rs494874 chr2 169789306 Intron 7 6426 CEU:1.0;1.0 FUNCTIONAL_SNP rs853787 chr2 169802252 Intron 7 19372 CEU:1.0;0.953 FUNCTIONAL_SNP rs502570 chr2 169774959 Intergenic 7 7921 CEU:1.0;0.865, JPT:1.0;0.741 FUNCTIONAL_SNP rs486981 chr2 169782149 Intron 7 731 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs508506 chr2 169784955 Intron 7 2075 CEU:1.0;1.0 FUNCTIONAL_SNP rs475612 chr2 169776746 Intergenic 7 6134 CEU:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs537183 chr2 169774646 Intergenic 7 8234 CEU:1.0;1.0 FUNCTIONAL_SNP rs485094 chr2 169782353 Intron 7 527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs563694 chr2 169774071 Intergenic 7 8809 CEU:1.0;1.0 LEAD_SNP rs552976 chr2 169791438 Intron 5b ASSOCIATION 20858683 Glycated hemoglobin levels 17.096910013 ABCB11 FUNCTIONAL_SNP rs484066 chr2 169782481 Intron 4 8957 CEU:1.0;0.958 FUNCTIONAL_SNP rs569805 chr2 169782880 Intron 5a 8558 CEU:1.0;1.0 FUNCTIONAL_SNP rs579060 chr2 169783039 Intron 5a 8399 CEU:1.0;1.0 FUNCTIONAL_SNP rs853789 chr2 169801488 Intron 6 10050 CEU:1.0;0.956, JPT:1.0;1.0 FUNCTIONAL_SNP rs557462 chr2 169777595 Intergenic 7 13843 CEU:1.0;1.0 FUNCTIONAL_SNP rs494874 chr2 169789306 Intron 7 2132 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs853787 chr2 169802252 Intron 7 10814 CEU:1.0;0.958 FUNCTIONAL_SNP rs502570 chr2 169774959 Intergenic 7 16479 CEU:1.0;0.878 FUNCTIONAL_SNP rs486981 chr2 169782149 Intron 7 9289 CEU:1.0;1.0 FUNCTIONAL_SNP rs508506 chr2 169784955 Intron 7 6483 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs475612 chr2 169776746 Intergenic 7 14692 CEU:1.0;1.0 FUNCTIONAL_SNP rs537183 chr2 169774646 Intergenic 7 16792 CEU:1.0;1.0 FUNCTIONAL_SNP rs485094 chr2 169782353 Intron 7 9085 CEU:1.0;1.0 FUNCTIONAL_SNP rs563694 chr2 169774071 Intergenic 7 17367 CEU:1.0;1.0 LEAD_SNP rs830998 chr2 170133086 Intron 7 ASSOCIATION 21079607 Anorexia nervosa 5.04575749056 LRP2 FUNCTIONAL_SNP rs831002 chr2 170133752 Intron 7 666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 LEAD_SNP rs2544390 chr2 170204846 Intron 7 ASSOCIATION 20139978 Hematological and biochemical traits 7.39794000867 LRP2 FUNCTIONAL_SNP rs2673172 chr2 170204800 Intron 7 46 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2080401 chr2 171540823 Intron 7 ASSOCIATION 21347282 Coronary heart disease 5.15490195999 HMGB1L4 - SP5 FUNCTIONAL_SNP rs6706901 chr2 171544171 Intron 5b 3348 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 LEAD_SNP rs4668338 chr2 171733225 Intergenic 7 ASSOCIATION 18759275 Serum uric acid 5.52287874528 GAD1 - GORASP2 LEAD_SNP rs4668356 chr2 171822466 Coding 4 ASSOCIATION 20595579 Longevity 6.30102999566 GORASP2 ASSOCIATION 19734545 Cognitive performance 6.0 GORASP2 FUNCTIONAL_SNP rs2883940 chr2 171853359 Intron 3a 30893 CEU:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs2162574 chr2 171774117 Intergenic 4 48349 CEU:1.0;0.801, YRI:0.752;0.523 FUNCTIONAL_SNP rs13017649 chr2 171788913 Intron 4 33553 CEU:1.0;1.0, YRI:0.818;0.513 FUNCTIONAL_SNP rs16859177 chr2 172006576 Intron 4 184110 CEU:1.0;1.0 FUNCTIONAL_SNP rs1863679 chr2 172017906 Intron 4 195440 CEU:1.0;0.907 FUNCTIONAL_SNP rs2557791 chr2 171778809 Intergenic 5a 43657 CEU:1.0;0.801, YRI:0.898;0.543 FUNCTIONAL_SNP rs2356600 chr2 171956263 Intron 5a 133797 CEU:1.0;1.0, YRI:0.949;0.607 FUNCTIONAL_SNP rs16859176 chr2 171993126 Intron 5b 170660 CEU:1.0;1.0 FUNCTIONAL_SNP rs2059723 chr2 171831197 Intergenic 5b 8731 CEU:1.0;0.907 FUNCTIONAL_SNP rs2723248 chr2 171873251 Intron 6 50785 CEU:1.0;0.907, YRI:1.0;0.824 FUNCTIONAL_SNP rs4668342 chr2 171758777 Intergenic 6 63689 CEU:1.0;0.801 FUNCTIONAL_SNP rs16859087 chr2 171855833 Intron 6 33367 CEU:1.0;1.0, YRI:1.0;0.528 FUNCTIONAL_SNP rs7608813 chr2 171803906 Intron 6 18560 CEU:1.0;1.0, YRI:0.899;0.704 FUNCTIONAL_SNP rs2356609 chr2 171983914 Intron 7 161448 CEU:1.0;1.0 FUNCTIONAL_SNP rs16859167 chr2 171983407 Intron 7 160941 CEU:1.0;1.0 FUNCTIONAL_SNP rs6736045 chr2 171950740 Intron 7 128274 CEU:1.0;1.0 FUNCTIONAL_SNP rs2676143 chr2 171805870 Intron 7 16596 CEU:1.0;1.0 FUNCTIONAL_SNP rs2676145 chr2 171790387 Intron 7 32079 CEU:1.0;1.0 FUNCTIONAL_SNP rs2723250 chr2 171871244 Intron 7 48778 CEU:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs2723253 chr2 171833910 Intergenic 7 11444 CEU:1.0;1.0 FUNCTIONAL_SNP rs1035839 chr2 171809485 Intron 7 12981 CEU:1.0;1.0 FUNCTIONAL_SNP rs13389859 chr2 171948875 Intron 7 126409 CEU:1.0;1.0 FUNCTIONAL_SNP rs6753513 chr2 171802159 Intron 7 20307 CEU:1.0;1.0 FUNCTIONAL_SNP rs16859121 chr2 171882754 Intron 7 60288 CEU:1.0;1.0, YRI:1.0;0.519 LEAD_SNP rs12621278 chr2 173311553 Intron 4 ASSOCIATION 19767753 Prostate cancer 22.0457574906 ITGA6 FUNCTIONAL_SNP rs2293648 chr2 173352157 Coding 7 40604 CEU:1.0;1.0, CHB:0.799;0.6, JPT:0.842;0.709 FUNCTIONAL_SNP rs16860634 chr2 173368358 Exon,non-coding 7 56805 CEU:1.0;1.0, CHB:0.799;0.6, JPT:0.842;0.709 FUNCTIONAL_SNP rs1574259 chr2 173313453 Intron 2b 1900 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;0.927 FUNCTIONAL_SNP rs13414928 chr2 173304302 Intron 4 7251 CEU:1.0;1.0, CHB:1.0;0.839, JPT:1.0;0.805 FUNCTIONAL_SNP rs12622724 chr2 173324908 Intron 5b 13355 CEU:1.0;1.0, CHB:1.0;0.729, JPT:0.823;0.677 FUNCTIONAL_SNP rs12052253 chr2 173314713 Intron 5b 3160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3762618 chr2 173305847 Intron 5b 5706 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16860643 chr2 173371278 Intron 5b 59725 CEU:1.0;1.0, CHB:0.799;0.6, JPT:0.842;0.709 FUNCTIONAL_SNP rs1574256 chr2 173313965 Intron 5b 2412 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2293645 chr2 173366960 Intron 6 55407 CEU:1.0;1.0, CHB:0.799;0.6, JPT:0.833;0.694 FUNCTIONAL_SNP rs16860438 chr2 173321413 Intron 6 9860 CEU:1.0;1.0, CHB:1.0;0.752, JPT:1.0;0.863 FUNCTIONAL_SNP rs12613307 chr2 173325244 Intron 6 13691 CEU:1.0;1.0, CHB:1.0;0.77, JPT:0.842;0.709 FUNCTIONAL_SNP rs10930559 chr2 173352824 Intron 6 41271 CEU:1.0;1.0, CHB:0.799;0.6, JPT:0.842;0.709 FUNCTIONAL_SNP rs13410475 chr2 173309618 Intron 7 1935 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16860426 chr2 173319112 Intron 7 7559 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;0.927 FUNCTIONAL_SNP rs12052385 chr2 173316217 Intron 7 4664 CEU:1.0;1.0, CHB:1.0;0.77, JPT:1.0;0.85 FUNCTIONAL_SNP rs2293647 chr2 173344680 Intron 7 33127 CEU:1.0;1.0, CHB:1.0;0.615, JPT:0.815;0.564 FUNCTIONAL_SNP rs10207640 chr2 173307726 Intron 7 3827 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10207654 chr2 173307756 Intron 7 3797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16860478 chr2 173334716 Intron 7 23163 CEU:1.0;1.0, CHB:0.799;0.6, JPT:0.842;0.709 FUNCTIONAL_SNP rs16860515 chr2 173342416 Intron 7 30863 CEU:1.0;1.0, CHB:0.799;0.6, JPT:0.915;0.774 FUNCTIONAL_SNP rs4405725 chr2 173305382 Intron 7 6171 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16860397 chr2 173308194 Intron 7 3359 CEU:1.0;1.0, CHB:1.0;0.77, JPT:1.0;0.85 FUNCTIONAL_SNP rs16860513 chr2 173342367 Intron 7 30814 CEU:1.0;1.0, CHB:0.839;0.61, JPT:0.808;0.597 LEAD_SNP rs6433379 chr2 173620465 Intron 6 ASSOCIATION 20595579 Longevity 8.0 RAPGEF4 FUNCTIONAL_SNP rs10164414 chr2 173623973 Intron 7 3508 CEU:1.0;0.868 FUNCTIONAL_SNP rs10203074 chr2 173616375 Intron 7 4090 CEU:1.0;0.867 FUNCTIONAL_SNP rs10189033 chr2 173641633 Intron 7 21168 CEU:1.0;0.804 FUNCTIONAL_SNP rs13413998 chr2 173617201 Intron 7 3264 CEU:1.0;0.867 FUNCTIONAL_SNP rs10190070 chr2 173615769 Intron 7 4696 CEU:1.0;0.867 LEAD_SNP rs7590983 chr2 174362349 Intergenic 7 ASSOCIATION 19260139 Anthropometric traits 5.22184874962 CDCA7 - RPL5P7 LEAD_SNP rs4972755 chr2 176239849 Intron 7 ASSOCIATION 20351715 Bipolar disorder and major depressive disorder (combined) 5.52287874528 RPS15AP14 - EXTL2P1 FUNCTIONAL_SNP rs2437889 chr2 176270239 Intron 5a 30390 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.826, YRI:0.955;0.722 FUNCTIONAL_SNP rs4274574 chr2 176229796 Intron 5b 10053 CEU:1.0;1.0, CHB:1.0;0.858, JPT:0.95;0.86, YRI:1.0;0.963 FUNCTIONAL_SNP rs7585693 chr2 176263740 Intron 5b 23891 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6739734 chr2 176247301 Intron 6 7452 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4561629 chr2 176246440 Intron 6 6591 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:0.963;0.895 FUNCTIONAL_SNP rs4456669 chr2 176249171 Intron 6 9322 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.956, YRI:1.0;1.0 FUNCTIONAL_SNP rs2461771 chr2 176277378 Intron 7 37529 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.83, YRI:0.881;0.65 FUNCTIONAL_SNP rs2461772 chr2 176273267 Intron 7 33418 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.826, YRI:0.955;0.722 FUNCTIONAL_SNP rs4308106 chr2 176236921 Intron 7 2928 CEU:1.0;1.0, CHB:0.949;0.901, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs10190531 chr2 176241049 Intron 7 1200 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7370441 chr2 176224075 Intron 7 15774 CEU:1.0;1.0, CHB:0.839;0.641, JPT:0.904;0.781 FUNCTIONAL_SNP rs7579257 chr2 176221858 Intron 7 17991 CEU:1.0;1.0, CHB:0.941;0.726, JPT:1.0;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs2437910 chr2 176277484 Intron 7 37635 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.83, YRI:0.875;0.637 FUNCTIONAL_SNP rs4566335 chr2 176261834 Intron 7 21985 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6760300 chr2 176234764 Intron 7 5085 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.956, YRI:1.0;1.0 FUNCTIONAL_SNP rs12052543 chr2 176225885 Intron 7 13964 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.956, YRI:1.0;1.0 FUNCTIONAL_SNP rs4606890 chr2 176244304 Intron 7 4455 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs4496309 chr2 176220710 Intron 7 19139 CEU:1.0;1.0, CHB:0.836;0.634, JPT:0.904;0.781 FUNCTIONAL_SNP rs9973752 chr2 176219945 Intron 7 19904 CEU:1.0;1.0, CHB:0.839;0.641, JPT:0.906;0.786 LEAD_SNP rs2461751 chr2 176289319 Intron 7 ASSOCIATION 19389651 Electrocardiographic conduction measures 5.09691001301 RPS15AP14 - EXTL2P1 FUNCTIONAL_SNP rs2461754 chr2 176288552 Intron 6 767 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2461781 chr2 176294884 Intron 7 5565 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7566934 chr2 176654738 Intergenic 6 ASSOCIATION 21130836 Information processing speed 5.15490195999 RPS15AP14 - EXTL2P1 FUNCTIONAL_SNP rs7594083 chr2 176655240 Intergenic 5b 502 CEU:1.0;0.952, JPT:1.0;0.526, YRI:1.0;1.0 FUNCTIONAL_SNP rs2121429 chr2 176654605 Intergenic 6 133 CEU:1.0;1.0, CHB:1.0;0.794, JPT:1.0;0.775, YRI:1.0;0.89 FUNCTIONAL_SNP rs1446829 chr2 176677084 Intergenic 7 22346 CEU:0.905;0.819, JPT:0.885;0.514 LEAD_SNP rs2592394 chr2 176991779 Intergenic 4 ASSOCIATION 20700443 Serum magnesium levels 6.30102999566 HOXD9 - HOXD8 FUNCTIONAL_SNP rs711822 chr2 176989023 Exon,non-coding 2a 2756 CEU:1.0;0.91, CHB:1.0;0.952, JPT:1.0;0.777, YRI:1.0;0.755 FUNCTIONAL_SNP rs711825 chr2 176993129 Exon,non-coding 2b 1350 CEU:1.0;0.953, CHB:1.0;0.954, JPT:1.0;0.908, YRI:1.0;1.0 FUNCTIONAL_SNP rs10445765 chr2 176987220 Intergenic 4 4559 CEU:1.0;0.869, CHB:1.0;0.953, JPT:1.0;0.822 FUNCTIONAL_SNP rs4972804 chr2 176996023 Intron 5b 4244 CEU:1.0;0.907 FUNCTIONAL_SNP rs2113563 chr2 176999012 Intergenic 5b 7233 CEU:1.0;0.909 LEAD_SNP rs2072590 chr2 177042633 Exon,non-coding 4 ASSOCIATION 20852632 Ovarian cancer 13.3010299957 HOXD3 - HOXD1 FUNCTIONAL_SNP rs711830 chr2 177037311 Exon,non-coding 4 5322 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs717852 chr2 177031623 Intron 5b 11010 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2857540 chr2 177026698 Intron 5b 15935 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4972504 chr2 177018726 Intron 5b 23907 CEU:1.0;0.876, CHB:1.0;0.798, JPT:1.0;0.93, YRI:0.79;0.624 FUNCTIONAL_SNP rs1318778 chr2 177037831 Intergenic 5b 4802 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1529093 chr2 177909595 Intron 5a ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.69897000434 RPL29P8 - HNRNPA3 FUNCTIONAL_SNP rs12105278 chr2 177929191 Intron 5a 19596 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909, YRI:0.904;0.747 FUNCTIONAL_SNP rs7588467 chr2 177917856 Intron 5b 8261 CEU:0.958;0.849, CHB:1.0;0.749, JPT:1.0;0.909 FUNCTIONAL_SNP rs4894234 chr2 177896927 Intron 7 12668 CEU:1.0;0.888, CHB:1.0;0.755, JPT:0.95;0.86 FUNCTIONAL_SNP rs1358622 chr2 177930189 Intron 7 20594 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909, YRI:0.917;0.776 LEAD_SNP rs12476289 chr2 179641975 Coding 7 ASSOCIATION 20031603 QT interval 5.69897000434 TTN LEAD_SNP rs16866933 chr2 180566678 Intron 5b ASSOCIATION 21658281 Sudden cardiac arrest 13.2218487496 ZNF385B LEAD_SNP rs16867321 chr2 181362379 Intergenic 6 ASSOCIATION 21552555 Obesity 5.69897000434 CWC22 - FTHL20 FUNCTIONAL_SNP rs2887180 chr2 181449305 Intron 6 86926 CEU:1.0;0.941, JPT:1.0;0.503, YRI:0.735;0.513 FUNCTIONAL_SNP rs1919155 chr2 181457053 Intron 6 94674 CEU:1.0;0.941, YRI:0.735;0.513 FUNCTIONAL_SNP rs4667228 chr2 181498824 Intron 6 136445 CEU:1.0;0.941 FUNCTIONAL_SNP rs9677293 chr2 181499459 Intron 6 137080 CEU:1.0;0.921, JPT:1.0;0.546 FUNCTIONAL_SNP rs1453060 chr2 181330763 Intergenic 7 31616 CEU:1.0;0.819, CHB:0.927;0.678, JPT:1.0;0.943, YRI:0.95;0.902 FUNCTIONAL_SNP rs1919148 chr2 181501758 Intron 7 139379 CEU:1.0;0.941 FUNCTIONAL_SNP rs16867314 chr2 181336471 Intergenic 7 25908 CEU:1.0;0.827, CHB:0.927;0.678, JPT:1.0;0.943, YRI:1.0;0.95 FUNCTIONAL_SNP rs1358520 chr2 181440081 Intron 7 77702 CEU:1.0;1.0, JPT:1.0;0.503, YRI:0.735;0.513 FUNCTIONAL_SNP rs1358521 chr2 181444628 Intron 7 82249 CEU:1.0;1.0, YRI:0.735;0.513 FUNCTIONAL_SNP rs12464199 chr2 181333307 Intergenic 7 29072 CEU:1.0;0.883, CHB:0.927;0.678, JPT:1.0;0.943, YRI:0.946;0.706 FUNCTIONAL_SNP rs16867322 chr2 181369403 Intergenic 7 7024 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.722 LEAD_SNP rs918959 chr2 181513729 Intron 7 ASSOCIATION 21408207 Systemic lupus erythematosus 5.69897000434 CWC22 - FTHL20 FUNCTIONAL_SNP rs1569159 chr2 181481625 Intron 6 32104 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10490714 chr2 181474215 Intron 6 39514 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.848, YRI:1.0;1.0 FUNCTIONAL_SNP rs16867337 chr2 181471294 Intron 7 42435 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.854, YRI:1.0;1.0 FUNCTIONAL_SNP rs16867346 chr2 181516696 Intron 7 2967 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10490713 chr2 181473920 Intron 7 39809 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.861, YRI:1.0;1.0 LEAD_SNP rs13010713 chr2 181996045 Intron 7 ASSOCIATION 20190752 Celiac disease 10.3010299957 UBE2E3 - ITGA4 FUNCTIONAL_SNP rs4667114 chr2 182035192 Intron 2b 39147 CEU:1.0;0.853, CHB:1.0;0.864, YRI:1.0;0.74 FUNCTIONAL_SNP rs10189776 chr2 182030229 Intron 4 34184 CEU:1.0;0.853, CHB:1.0;0.868, YRI:1.0;0.744 FUNCTIONAL_SNP rs6735551 chr2 182039477 Intron 5b 43432 CEU:1.0;0.853, CHB:0.914;0.597, YRI:1.0;0.716 FUNCTIONAL_SNP rs12615545 chr2 182048452 Intron 5b 52407 CEU:1.0;0.848, CHB:0.913;0.594, JPT:0.803;0.543 FUNCTIONAL_SNP rs4667115 chr2 182035403 Intron 5b 39358 CEU:1.0;0.853, CHB:1.0;0.868, YRI:1.0;0.744 FUNCTIONAL_SNP rs4444479 chr2 182063448 Intron 5b 67403 CEU:1.0;0.82 FUNCTIONAL_SNP rs4666716 chr2 182061996 Intron 5b 65951 CEU:1.0;0.82 FUNCTIONAL_SNP rs4524093 chr2 182055300 Intron 6 59255 CEU:1.0;0.848, CHB:0.914;0.597 FUNCTIONAL_SNP rs6740034 chr2 182036900 Intron 6 40855 CEU:1.0;0.853, CHB:0.914;0.597, YRI:1.0;0.716 FUNCTIONAL_SNP rs7355751 chr2 182090633 Intron 6 94588 CEU:1.0;0.813 FUNCTIONAL_SNP rs12620692 chr2 182038445 Intron 6 42400 CEU:1.0;0.853, CHB:0.914;0.597, YRI:1.0;0.716 FUNCTIONAL_SNP rs1018326 chr2 182007800 Intron 6 11755 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.928 FUNCTIONAL_SNP rs1568257 chr2 182028396 Intron 7 32351 CEU:1.0;0.849, CHB:1.0;0.93, JPT:1.0;0.626, YRI:1.0;0.772 FUNCTIONAL_SNP rs4514841 chr2 182052045 Intron 7 56000 CEU:1.0;0.833, CHB:0.914;0.597 FUNCTIONAL_SNP rs4522566 chr2 182058191 Intron 7 62146 CEU:1.0;0.802 FUNCTIONAL_SNP rs1996501 chr2 182029358 Intron 7 33313 CEU:1.0;0.853, CHB:1.0;0.812, YRI:1.0;0.744 FUNCTIONAL_SNP rs7355617 chr2 182092655 Intron 7 96610 CEU:1.0;0.82 FUNCTIONAL_SNP rs4563183 chr2 182058528 Intron 7 62483 CEU:1.0;0.82 FUNCTIONAL_SNP rs12615998 chr2 182062794 Intron 7 66749 CEU:1.0;0.82 FUNCTIONAL_SNP rs12616042 chr2 182062879 Intron 7 66834 CEU:1.0;0.82 FUNCTIONAL_SNP rs4439920 chr2 182059382 Intron 7 63337 CEU:1.0;0.82 FUNCTIONAL_SNP rs13405121 chr2 182019687 Intron 7 23642 CEU:1.0;0.887, CHB:1.0;0.812, YRI:0.956;0.703 FUNCTIONAL_SNP rs7580110 chr2 182057083 Intron 7 61038 CEU:1.0;0.82 LEAD_SNP rs1018326 chr2 182007800 Intron 6 ASSOCIATION 20062062 Ankylosing spondylitis 5.69897000434 UBE2E3 - ITGA4 FUNCTIONAL_SNP rs4667114 chr2 182035192 Intron 2b 27392 CEU:1.0;0.96, CHB:1.0;0.872, YRI:0.955;0.676 FUNCTIONAL_SNP rs10189776 chr2 182030229 Intron 4 22429 CEU:1.0;0.96, CHB:1.0;0.874, YRI:0.956;0.68 FUNCTIONAL_SNP rs7588217 chr2 181988909 Intron 4 18891 CEU:1.0;0.814, CHB:1.0;1.0, JPT:1.0;0.915, YRI:0.963;0.894 FUNCTIONAL_SNP rs6735551 chr2 182039477 Intron 5b 31677 CEU:1.0;0.96, CHB:0.918;0.611, YRI:0.955;0.653 FUNCTIONAL_SNP rs12615545 chr2 182048452 Intron 5b 40652 CEU:1.0;0.959, CHB:0.919;0.614, JPT:0.805;0.547 FUNCTIONAL_SNP rs4667115 chr2 182035403 Intron 5b 27603 CEU:1.0;0.96, CHB:1.0;0.874, YRI:0.956;0.68 FUNCTIONAL_SNP rs4444479 chr2 182063448 Intron 5b 55648 CEU:1.0;0.922 FUNCTIONAL_SNP rs4666715 chr2 182061840 Intron 5b 54040 CEU:1.0;0.911 FUNCTIONAL_SNP rs4666716 chr2 182061996 Intron 5b 54196 CEU:1.0;0.922 FUNCTIONAL_SNP rs4401183 chr2 182095265 Intron 6 87465 CEU:1.0;0.886 FUNCTIONAL_SNP rs4524093 chr2 182055300 Intron 6 47500 CEU:1.0;0.959, CHB:0.92;0.616 FUNCTIONAL_SNP rs6740034 chr2 182036900 Intron 6 29100 CEU:1.0;0.96, CHB:0.92;0.616, YRI:0.955;0.653 FUNCTIONAL_SNP rs7355751 chr2 182090633 Intron 6 82833 CEU:1.0;0.919 FUNCTIONAL_SNP rs12620692 chr2 182038445 Intron 6 30645 CEU:1.0;0.96, CHB:0.918;0.611, YRI:0.955;0.653 FUNCTIONAL_SNP rs6731186 chr2 181977953 Intergenic 6 29847 CEU:1.0;0.814, CHB:1.0;0.933, JPT:1.0;1.0, YRI:0.963;0.894 FUNCTIONAL_SNP rs1568257 chr2 182028396 Intron 7 20596 CEU:1.0;0.959, CHB:1.0;0.933, JPT:1.0;0.626, YRI:0.957;0.707 FUNCTIONAL_SNP rs4514841 chr2 182052045 Intron 7 44245 CEU:1.0;0.954, CHB:0.92;0.616 FUNCTIONAL_SNP rs4522566 chr2 182058191 Intron 7 50391 CEU:1.0;0.914 FUNCTIONAL_SNP rs1996501 chr2 182029358 Intron 7 21558 CEU:1.0;0.96, CHB:1.0;0.819, YRI:0.956;0.68 FUNCTIONAL_SNP rs7355617 chr2 182092655 Intron 7 84855 CEU:1.0;0.922 FUNCTIONAL_SNP rs4563183 chr2 182058528 Intron 7 50728 CEU:1.0;0.922 FUNCTIONAL_SNP rs10930961 chr2 182094997 Intron 7 87197 CEU:0.953;0.868 FUNCTIONAL_SNP rs13010713 chr2 181996045 Intron 7 11755 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.928 FUNCTIONAL_SNP rs12615998 chr2 182062794 Intron 7 54994 CEU:1.0;0.922 FUNCTIONAL_SNP rs4441425 chr2 182058490 Intron 7 50690 CEU:1.0;0.907 FUNCTIONAL_SNP rs12616042 chr2 182062879 Intron 7 55079 CEU:1.0;0.922 FUNCTIONAL_SNP rs4439920 chr2 182059382 Intron 7 51582 CEU:1.0;0.922 FUNCTIONAL_SNP rs13405121 chr2 182019687 Intron 7 11887 CEU:1.0;1.0, CHB:1.0;0.821, YRI:0.912;0.639 FUNCTIONAL_SNP rs7580110 chr2 182057083 Intron 7 49283 CEU:1.0;0.922 LEAD_SNP rs7602460 chr2 182261869 Intron 7 ASSOCIATION 21041692 Atrioventricular conduction 5.22184874962 UBE2E3 - ITGA4 FUNCTIONAL_SNP rs7602799 chr2 182260252 Intron 6 1617 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 LEAD_SNP rs12988934 chr2 182323665 Intron 5b ASSOCIATION 21738478 White blood cell types 13.6989700043 ITGA4 LEAD_SNP rs993648 chr2 182455994 Intron 7 ASSOCIATION 18521091 Response to iloperidone treatment (QT prolongation) 5.52287874528 CERKL FUNCTIONAL_SNP rs10930973 chr2 182470425 Intron 7 14431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs767463 chr2 182457803 Intron 7 1809 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs993650 chr2 182455848 Intron 7 146 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16867454 chr2 182462485 Intron 7 6491 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.952;0.864 LEAD_SNP rs1344706 chr2 185778428 Intron 7 ASSOCIATION 18677311 Schizophrenia 6.69897000434 ZNF804A LEAD_SNP rs840616 chr2 188196469 Intron 6 ASSOCIATION 21378988 Coronary heart disease 6.15490195999 IMPDH1P7 - CALCRL FUNCTIONAL_SNP rs7586970 chr2 188343497 Coding 5b 147028 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs696092 chr2 188210214 Exon,non-coding 3a 13745 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.679 FUNCTIONAL_SNP rs6753700 chr2 188252411 Exon,non-coding 5a 55942 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176546 chr2 188340396 Intron 2b 143927 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6719550 chr2 188272460 Intron 4 75991 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13430354 chr2 188234520 Intron 4 38051 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs698592 chr2 188214239 Intron 4 17770 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs880890 chr2 188184500 Intron 4 11969 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs840585 chr2 188184435 Intron 4 12034 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3771059 chr2 188336097 Intron 5a 139628 CEU:1.0;0.881, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs3821184 chr2 188249420 Intron 5b 52951 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13424790 chr2 188323852 Intron 5b 127383 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3771078 chr2 188270337 Intron 5b 73868 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs698579 chr2 188229820 Intron 5b 33351 CEU:1.0;0.957, CHB:1.0;0.81, JPT:1.0;0.755 FUNCTIONAL_SNP rs1355520 chr2 188307962 Intron 5b 111493 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2349315 chr2 188269685 Intron 5b 73216 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11897572 chr2 188316181 Intron 5b 119712 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1706262 chr2 188203848 Intron 5b 7379 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4667160 chr2 188166881 Intron 5b 29588 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176498 chr2 188353919 Intron 5b 157450 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840578 chr2 188167105 Intron 5b 29364 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176528 chr2 188345017 Intron 5b 148548 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176580 chr2 188335246 Intron 5b 138777 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176583 chr2 188334401 Intron 5b 137932 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6434219 chr2 188241953 Intron 6 45484 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1912848 chr2 188310305 Intron 6 113836 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10203398 chr2 188315577 Intron 6 119108 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10190916 chr2 188153308 Intron 6 43161 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs10179705 chr2 188315234 Intron 6 118765 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7591567 chr2 188304446 Intron 6 107977 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728667 chr2 188153421 Intron 6 43048 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728673 chr2 188156452 Intron 6 40017 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs3771061 chr2 188332190 Intron 6 135721 CEU:1.0;0.844, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs860860 chr2 188159273 Intron 6 37196 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs844479 chr2 188159178 Intron 6 37291 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs907463 chr2 188185287 Intron 6 11182 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs698590 chr2 188214823 Intron 6 18354 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1540859 chr2 188170060 Intron 6 26409 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1355519 chr2 188308604 Intron 6 112135 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7598858 chr2 188343131 Intron 6 146662 CEU:1.0;0.881, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs1706251 chr2 188155444 Intron 6 41025 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs1706252 chr2 188156578 Intron 6 39891 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs1706253 chr2 188156635 Intron 6 39834 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.696 FUNCTIONAL_SNP rs1706254 chr2 188156908 Intron 6 39561 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs861458 chr2 188157674 Intron 6 38795 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs858919 chr2 188157667 Intron 6 38802 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;0.822 FUNCTIONAL_SNP rs7589163 chr2 188236819 Intron 6 40350 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11903296 chr2 188291723 Intron 6 95254 CEU:1.0;0.868, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840570 chr2 188172677 Intron 6 23792 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840581 chr2 188190584 Intron 6 5885 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840591 chr2 188181424 Intron 6 15045 CEU:0.951;0.825, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs840595 chr2 188179494 Intron 6 16975 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840596 chr2 188178524 Intron 6 17945 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840600 chr2 188159750 Intron 6 36719 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs8176541 chr2 188341047 Intron 6 144578 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840610 chr2 188199002 Intron 6 2533 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9288140 chr2 188254173 Intron 6 57704 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176592 chr2 188332692 Intron 6 136223 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10174456 chr2 188198652 Intron 6 2183 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7576060 chr2 188073163 Intron 6 123306 CEU:1.0;0.959, CHB:0.885;0.784, JPT:1.0;0.846 FUNCTIONAL_SNP rs1918898 chr2 188100639 Intron 7 95830 CEU:1.0;0.959 FUNCTIONAL_SNP rs13390389 chr2 188112487 Intron 7 83982 CEU:1.0;0.959, CHB:1.0;0.888, JPT:1.0;0.846 FUNCTIONAL_SNP rs10931283 chr2 188211443 Intron 7 14974 CEU:0.957;0.916, YRI:0.762;0.51 FUNCTIONAL_SNP rs10931284 chr2 188211610 Intron 7 15141 CEU:1.0;0.958, YRI:1.0;0.793 FUNCTIONAL_SNP rs16829016 chr2 188292458 Intron 7 95989 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13404250 chr2 188116196 Intron 7 80273 CEU:1.0;0.959, CHB:1.0;0.888, JPT:1.0;0.846 FUNCTIONAL_SNP rs858744 chr2 188216783 Intron 7 20314 CEU:0.958;0.919, CHB:1.0;0.897, JPT:1.0;0.864 FUNCTIONAL_SNP rs3821180 chr2 188278035 Intron 7 81566 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs858759 chr2 188235611 Intron 7 39142 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728672 chr2 188156425 Intron 7 40044 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6758089 chr2 188191834 Intron 7 4635 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13430665 chr2 188229007 Intron 7 32538 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2030976 chr2 188243940 Intron 7 47471 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1706246 chr2 188152166 Intron 7 44303 CEU:1.0;0.959, CHB:1.0;0.888, JPT:1.0;0.822 FUNCTIONAL_SNP rs1398061 chr2 188257985 Intron 7 61516 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13031901 chr2 188192019 Intron 7 4450 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176501 chr2 188353663 Intron 7 157194 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840571 chr2 188171676 Intron 7 24793 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840572 chr2 188171253 Intron 7 25216 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840576 chr2 188168350 Intron 7 28119 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840577 chr2 188168059 Intron 7 28410 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840580 chr2 188191051 Intron 7 5418 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840583 chr2 188186320 Intron 7 10149 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840584 chr2 188186079 Intron 7 10390 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840587 chr2 188183805 Intron 7 12664 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840588 chr2 188183781 Intron 7 12688 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840603 chr2 188160901 Intron 7 35568 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs840604 chr2 188160925 Intron 7 35544 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;0.845 FUNCTIONAL_SNP rs840609 chr2 188199583 Intron 7 3114 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840611 chr2 188198446 Intron 7 1977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.917 FUNCTIONAL_SNP rs1528229 chr2 188154489 Intron 7 41980 CEU:1.0;0.956, CHB:1.0;0.778, JPT:1.0;0.822 FUNCTIONAL_SNP rs1528230 chr2 188154825 Intron 7 41644 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs1528233 chr2 188207245 Intron 7 10776 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.718 FUNCTIONAL_SNP rs1528236 chr2 188170151 Intron 7 26318 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13411274 chr2 188236000 Intron 7 39531 CEU:1.0;0.958, CHB:1.0;0.576, JPT:1.0;0.603 LEAD_SNP rs7586970 chr2 188343497 Coding 5b ASSOCIATION 21378988 Coronary heart disease 5.04575749056 TFPI FUNCTIONAL_SNP rs696092 chr2 188210214 Exon,non-coding 3a 133283 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6753700 chr2 188252411 Exon,non-coding 5a 91086 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176546 chr2 188340396 Intron 2b 3101 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs6719550 chr2 188272460 Intron 4 71037 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13430354 chr2 188234520 Intron 4 108977 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs698592 chr2 188214239 Intron 4 129258 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs880890 chr2 188184500 Intron 4 158997 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs840585 chr2 188184435 Intron 4 159062 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176548 chr2 188340335 Intron 4 3162 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;0.545, YRI:1.0;0.664 FUNCTIONAL_SNP rs3771059 chr2 188336097 Intron 5a 7400 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;0.664 FUNCTIONAL_SNP rs11674362 chr2 188318187 Intron 5a 25310 CEU:1.0;0.873, CHB:1.0;1.0, JPT:1.0;0.545 FUNCTIONAL_SNP rs1912846 chr2 188325444 Intron 5b 18053 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;0.545 FUNCTIONAL_SNP rs3821184 chr2 188249420 Intron 5b 94077 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13424790 chr2 188323852 Intron 5b 19645 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.664 FUNCTIONAL_SNP rs3771078 chr2 188270337 Intron 5b 73160 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs698579 chr2 188229820 Intron 5b 113677 CEU:1.0;0.915, CHB:1.0;0.81, JPT:1.0;0.755 FUNCTIONAL_SNP rs1355520 chr2 188307962 Intron 5b 35535 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.664 FUNCTIONAL_SNP rs2349315 chr2 188269685 Intron 5b 73812 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1706262 chr2 188203848 Intron 5b 139649 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4667160 chr2 188166881 Intron 5b 176616 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4140885 chr2 188333064 Intron 5b 10433 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11897572 chr2 188316181 Intron 5b 27316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.664 FUNCTIONAL_SNP rs8176498 chr2 188353919 Intron 5b 10422 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840578 chr2 188167105 Intron 5b 176392 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176528 chr2 188345017 Intron 5b 1520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176580 chr2 188335246 Intron 5b 8251 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.575 FUNCTIONAL_SNP rs8176583 chr2 188334401 Intron 5b 9096 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.949;0.621 FUNCTIONAL_SNP rs6434219 chr2 188241953 Intron 6 101544 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1912848 chr2 188310305 Intron 6 33192 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10203398 chr2 188315577 Intron 6 27920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10190916 chr2 188153308 Intron 6 190189 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs10179705 chr2 188315234 Intron 6 28263 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7591567 chr2 188304446 Intron 6 39051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728667 chr2 188153421 Intron 6 190076 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728673 chr2 188156452 Intron 6 187045 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs3771061 chr2 188332190 Intron 6 11307 CEU:1.0;0.958, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs860860 chr2 188159273 Intron 6 184224 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs844479 chr2 188159178 Intron 6 184319 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs907463 chr2 188185287 Intron 6 158210 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs698590 chr2 188214823 Intron 6 128674 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1540859 chr2 188170060 Intron 6 173437 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1355519 chr2 188308604 Intron 6 34893 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7598858 chr2 188343131 Intron 6 366 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;0.664 FUNCTIONAL_SNP rs1706251 chr2 188155444 Intron 6 188053 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs1706252 chr2 188156578 Intron 6 186919 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs1706253 chr2 188156635 Intron 6 186862 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;0.696 FUNCTIONAL_SNP rs1706254 chr2 188156908 Intron 6 186589 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs861458 chr2 188157674 Intron 6 185823 CEU:1.0;0.909, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs858919 chr2 188157667 Intron 6 185830 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;0.822 FUNCTIONAL_SNP rs7589163 chr2 188236819 Intron 6 106678 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11903296 chr2 188291723 Intron 6 51774 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.523 FUNCTIONAL_SNP rs12104503 chr2 188297133 Intron 6 46364 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;0.545 FUNCTIONAL_SNP rs13418253 chr2 188322434 Intron 6 21063 CEU:0.955;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.839;0.517 FUNCTIONAL_SNP rs840570 chr2 188172677 Intron 6 170820 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840581 chr2 188190584 Intron 6 152913 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840591 chr2 188181424 Intron 6 162073 CEU:0.906;0.821, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs840595 chr2 188179494 Intron 6 164003 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840596 chr2 188178524 Intron 6 164973 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840600 chr2 188159750 Intron 6 183747 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs8176541 chr2 188341047 Intron 6 2450 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840610 chr2 188199002 Intron 6 144495 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840616 chr2 188196469 Intron 6 147028 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9288140 chr2 188254173 Intron 6 89324 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176592 chr2 188332692 Intron 6 10805 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.949;0.621 FUNCTIONAL_SNP rs10174456 chr2 188198652 Intron 6 144845 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1528236 chr2 188170151 Intron 7 173346 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10931283 chr2 188211443 Intron 7 132054 CEU:1.0;0.877 FUNCTIONAL_SNP rs10931284 chr2 188211610 Intron 7 131887 CEU:1.0;0.839 FUNCTIONAL_SNP rs16829016 chr2 188292458 Intron 7 51039 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.727 FUNCTIONAL_SNP rs858744 chr2 188216783 Intron 7 126714 CEU:1.0;0.881, CHB:1.0;0.897, JPT:1.0;0.864 FUNCTIONAL_SNP rs3821180 chr2 188278035 Intron 7 65462 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs858759 chr2 188235611 Intron 7 107886 CEU:0.953;0.867, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728672 chr2 188156425 Intron 7 187072 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs3771067 chr2 188295534 Intron 7 47963 CEU:0.939;0.832, CHB:1.0;0.875, JPT:1.0;0.787, YRI:1.0;0.771 FUNCTIONAL_SNP rs6758089 chr2 188191834 Intron 7 151663 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13430665 chr2 188229007 Intron 7 114490 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2030976 chr2 188243940 Intron 7 99557 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1706246 chr2 188152166 Intron 7 191331 CEU:1.0;0.919, CHB:1.0;0.888, JPT:1.0;0.822 FUNCTIONAL_SNP rs1398061 chr2 188257985 Intron 7 85512 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13031901 chr2 188192019 Intron 7 151478 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8176501 chr2 188353663 Intron 7 10166 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840571 chr2 188171676 Intron 7 171821 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840572 chr2 188171253 Intron 7 172244 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840576 chr2 188168350 Intron 7 175147 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840577 chr2 188168059 Intron 7 175438 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840580 chr2 188191051 Intron 7 152446 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840583 chr2 188186320 Intron 7 157177 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840584 chr2 188186079 Intron 7 157418 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840587 chr2 188183805 Intron 7 159692 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840588 chr2 188183781 Intron 7 159716 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840603 chr2 188160901 Intron 7 182596 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs840604 chr2 188160925 Intron 7 182572 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;0.845 FUNCTIONAL_SNP rs840609 chr2 188199583 Intron 7 143914 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs840611 chr2 188198446 Intron 7 145051 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1528229 chr2 188154489 Intron 7 189008 CEU:1.0;0.955, CHB:1.0;0.778, JPT:1.0;0.822 FUNCTIONAL_SNP rs1528230 chr2 188154825 Intron 7 188672 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs1528233 chr2 188207245 Intron 7 136252 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13411274 chr2 188236000 Intron 7 107497 CEU:1.0;0.917, CHB:1.0;0.576, JPT:1.0;0.603 LEAD_SNP rs10931468 chr2 191538562 Intron 5b ASSOCIATION 21399635 Primary biliary cirrhosis 18.6989700043 NAB1 FUNCTIONAL_SNP rs2286896 chr2 191535576 Intron 4 2986 CEU:1.0;1.0, CHB:0.842;0.676, JPT:0.818;0.524, YRI:0.898;0.806 FUNCTIONAL_SNP rs9678841 chr2 191561760 Intergenic 4 23198 CEU:1.0;0.927, CHB:1.0;0.781, JPT:0.947;0.852, YRI:0.948;0.856 FUNCTIONAL_SNP rs3771317 chr2 191543962 Intron 5a 5400 CEU:1.0;0.927, CHB:1.0;0.953, JPT:1.0;0.951, YRI:0.948;0.856 FUNCTIONAL_SNP rs1860849 chr2 191518860 Intron 5b 19702 CEU:1.0;1.0, YRI:0.898;0.806 FUNCTIONAL_SNP rs4853515 chr2 191552575 Intron 6 14013 CEU:1.0;0.927, CHB:1.0;0.953, JPT:1.0;0.951, YRI:0.948;0.856 FUNCTIONAL_SNP rs4853514 chr2 191517188 Intron 7 21374 CEU:1.0;1.0, YRI:0.793;0.629 FUNCTIONAL_SNP rs887701 chr2 191562927 Intergenic 7 24365 CEU:1.0;0.922, CHB:1.0;0.953, JPT:1.0;0.951, YRI:0.948;0.855 FUNCTIONAL_SNP rs16832798 chr2 191534372 Intron 7 4190 CEU:1.0;1.0, CHB:0.946;0.776, JPT:0.936;0.623, YRI:0.898;0.806 FUNCTIONAL_SNP rs16832836 chr2 191558030 Intergenic 7 19468 CEU:1.0;0.927, CHB:1.0;0.953, JPT:1.0;0.951, YRI:0.948;0.856 FUNCTIONAL_SNP rs1558471 chr2 191506773 Intergenic 7 31789 CEU:1.0;1.0, YRI:0.785;0.585 FUNCTIONAL_SNP rs4853724 chr2 191510532 Intergenic 7 28030 CEU:1.0;1.0, YRI:0.794;0.63 FUNCTIONAL_SNP rs12617955 chr2 191558492 Intergenic 7 19930 CEU:1.0;0.922, CHB:1.0;0.947, JPT:1.0;0.941, YRI:1.0;0.947 LEAD_SNP rs3821236 chr2 191902758 Intron 7 ASSOCIATION 20383147 Systemic sclerosis 8.52287874528 STAT4 ASSOCIATION 19165918 Systemic lupus erythematosus 10.096910013 STAT4 FUNCTIONAL_SNP rs11893432 chr2 191921874 Intron 5b 19116 CEU:1.0;1.0, CHB:1.0;0.908, JPT:0.828;0.618 FUNCTIONAL_SNP rs10168266 chr2 191935804 Intron 7 33046 CEU:1.0;0.899, CHB:1.0;0.744 FUNCTIONAL_SNP rs16833214 chr2 191913642 Intron 7 10884 CEU:1.0;0.945, CHB:0.946;0.85, JPT:1.0;0.854, YRI:1.0;1.0 FUNCTIONAL_SNP rs3024886 chr2 191900449 Intron 7 2309 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7574865 chr2 191964633 Intron 7 ASSOCIATION 21750679 Systemic sclerosis 12.6989700043 STAT4 ASSOCIATION 21408207 Systemic lupus erythematosus 5.09691001301 STAT4 ASSOCIATION 21408207 Systemic lupus erythematosus 19.6989700043 STAT4 ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 9.39794000867 STAT4 ASSOCIATION 20453841 Rheumatoid arthritis 5.69897000434 STAT4 ASSOCIATION 20453842 Rheumatoid arthritis 6.52287874528 STAT4 ASSOCIATION 19838193 Systemic lupus erythematosus 41.3010299957 STAT4 ASSOCIATION 18204098 Systemic lupus erythematosus 13.0457574906 STAT4 FUNCTIONAL_SNP rs7582694 chr2 191970120 Intron 4 5487 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942, YRI:1.0;0.815 FUNCTIONAL_SNP rs7568275 chr2 191966452 Intron 5b 1819 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs10181656 chr2 191969879 Intron 5b 5246 CEU:1.0;0.945, CHB:1.0;0.948, JPT:1.0;0.942, YRI:1.0;1.0 FUNCTIONAL_SNP rs4274624 chr2 191958656 Intron 5b 5977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942, YRI:1.0;1.0 FUNCTIONAL_SNP rs8179673 chr2 191969341 Intron 6 4708 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs10174238 chr2 191973034 Intron 7 8401 CEU:1.0;0.887, JPT:0.831;0.558 FUNCTIONAL_SNP rs11889341 chr2 191943742 Intron 7 20891 CEU:1.0;1.0, CHB:0.944;0.845, JPT:0.925;0.668, YRI:1.0;1.0 LEAD_SNP rs10497721 chr2 192914362 Intron 5a ASSOCIATION 17903298 Diabetes (incident) 6.15490195999 TMEFF2 LEAD_SNP rs13007495 chr2 192955505 Intron 7 ASSOCIATION 21658281 Sudden cardiac arrest 5.39794000867 TMEFF2 LEAD_SNP rs1385351 chr2 193333903 Intergenic 7 ASSOCIATION 20041166 HIV-1 control 5.39794000867 TMEFF2 - PCGEM1 FUNCTIONAL_SNP rs10173564 chr2 193335578 Intergenic 5a 1675 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.933 FUNCTIONAL_SNP rs1484893 chr2 193335659 Intergenic 5a 1756 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.933, YRI:1.0;0.725 FUNCTIONAL_SNP rs13431198 chr2 193339122 Intergenic 6 5219 CEU:1.0;0.945, CHB:1.0;0.83, JPT:0.923;0.792, YRI:1.0;0.637 FUNCTIONAL_SNP rs2357150 chr2 193344575 Intergenic 6 10672 CEU:1.0;0.938 FUNCTIONAL_SNP rs1385352 chr2 193334433 Intergenic 7 530 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;0.923 FUNCTIONAL_SNP rs6733357 chr2 193343003 Intergenic 7 9100 CEU:1.0;0.945, CHB:1.0;0.83, JPT:0.923;0.792, YRI:1.0;0.637 FUNCTIONAL_SNP rs6713179 chr2 193345479 Intergenic 7 11576 CEU:1.0;0.809 FUNCTIONAL_SNP rs1471772 chr2 193347387 Intergenic 7 13484 CEU:1.0;0.945, CHB:1.0;0.626, JPT:0.91;0.659 LEAD_SNP rs700651 chr2 198631714 Intron 7 ASSOCIATION 18997786 Intracranial aneurysm 7.39794000867 BOLL FUNCTIONAL_SNP rs10497806 chr2 198508951 Coding 5b 122763 CEU:0.947;0.852, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs700674 chr2 198693703 Intron 2b 61989 CEU:0.948;0.855, CHB:0.922;0.738, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700675 chr2 198700216 Intron 3a 68502 CEU:0.949;0.901, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700685 chr2 198715972 Intron 4 84258 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0 FUNCTIONAL_SNP rs2341778 chr2 198776546 Intron 4 144832 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700670 chr2 198687284 Intron 5a 55570 CEU:1.0;0.949, CHB:0.923;0.793, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700680 chr2 198707950 Intron 5a 76236 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700690 chr2 198727626 Intron 5a 95912 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1464211 chr2 198798630 Intron 5a 166916 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs1401091 chr2 198790423 Intron 5b 158709 CEU:1.0;0.95, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4850807 chr2 198575975 Intron 5b 55739 CEU:1.0;0.951, CHB:1.0;0.776, JPT:1.0;1.0 FUNCTIONAL_SNP rs4850812 chr2 198743655 Intron 5b 111941 CEU:1.0;0.948, CHB:0.928;0.756, JPT:1.0;1.0 FUNCTIONAL_SNP rs7564924 chr2 198513877 Intron 5b 117837 CEU:0.947;0.852, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs700656 chr2 198653667 Intergenic 5b 21953 CEU:1.0;0.951, CHB:1.0;0.825, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700658 chr2 198655007 Intergenic 5b 23293 CEU:1.0;0.951, CHB:1.0;0.825, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs700663 chr2 198670478 Intron 5b 38764 CEU:1.0;0.951, CHB:1.0;0.825, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1401092 chr2 198792320 Intron 5b 160606 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700683 chr2 198712332 Intron 5b 80618 CEU:1.0;0.951, CHB:0.921;0.736, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700688 chr2 198723833 Intron 5b 92119 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0 FUNCTIONAL_SNP rs1518365 chr2 198809410 Intron 5b 177696 CEU:1.0;0.942, CHB:0.92;0.784, JPT:1.0;1.0, YRI:1.0;0.7 FUNCTIONAL_SNP rs2574832 chr2 198704818 Intron 5b 73104 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4550664 chr2 198691405 Intron 6 59691 CEU:1.0;0.951, CHB:0.928;0.862, JPT:1.0;1.0 FUNCTIONAL_SNP rs34632716 chr2 198542619 Intergenic 6 89095 CEU:1.0;0.951, CHB:1.0;0.776, JPT:1.0;1.0 FUNCTIONAL_SNP rs6708239 chr2 198525084 Intron 6 106630 CEU:0.947;0.852, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs10166328 chr2 198511917 Intron 6 119797 CEU:0.898;0.806, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs10931787 chr2 198520615 Intron 6 111099 CEU:0.947;0.852, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs10931791 chr2 198573612 Intron 6 58102 CEU:1.0;0.95, CHB:1.0;0.776, JPT:1.0;1.0 FUNCTIONAL_SNP rs7557203 chr2 198795650 Intron 6 163936 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs770657 chr2 198674184 Intron 6 42470 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4850809 chr2 198583403 Intron 6 48311 CEU:1.0;0.951, CHB:1.0;0.776, JPT:1.0;1.0 FUNCTIONAL_SNP rs6434943 chr2 198762192 Intron 6 130478 CEU:1.0;1.0, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2060488 chr2 198751637 Intron 6 119923 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9967823 chr2 198531529 Intron 6 100185 CEU:0.945;0.847, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs700638 chr2 198588950 Intron 6 42764 CEU:1.0;0.951, CHB:1.0;0.776, JPT:1.0;1.0 FUNCTIONAL_SNP rs700642 chr2 198600730 Intron 6 30984 CEU:1.0;0.951, CHB:1.0;0.818, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700646 chr2 198608511 Intron 6 23203 CEU:1.0;0.951, CHB:1.0;0.825, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700671 chr2 198690001 Intron 6 58287 CEU:1.0;0.904, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700672 chr2 198691455 Intron 6 59741 CEU:1.0;0.946, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6729473 chr2 198763928 Intron 6 132214 CEU:1.0;0.951, CHB:0.925;0.746, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700686 chr2 198721054 Intron 6 89340 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1518361 chr2 198812874 Intron 6 181160 CEU:1.0;0.944, CHB:0.844;0.662, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs1518367 chr2 198807015 Intron 6 175301 CEU:1.0;0.906 FUNCTIONAL_SNP rs6719832 chr2 198533369 Intron 6 98345 CEU:0.947;0.852, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs1865586 chr2 198758868 Intron 6 127154 CEU:1.0;0.906, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs35730302 chr2 198818626 Intron 6 186912 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs1464209 chr2 198814396 Intron 6 182682 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs1589162 chr2 198782692 Intron 6 150978 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7600862 chr2 198534514 Intron 6 97200 CEU:0.947;0.852, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs1436131 chr2 198731230 Intron 6 99516 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs696817 chr2 198722225 Intron 6 90511 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6757632 chr2 198530266 Intron 7 101448 CEU:0.947;0.852, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs1598469 chr2 198515658 Intron 7 116056 CEU:0.945;0.847, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs11887138 chr2 198805838 Intron 7 174124 CEU:1.0;0.942, CHB:0.924;0.744, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs1401095 chr2 198779867 Intron 7 148153 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1401096 chr2 198823828 Intron 7 192114 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs10931793 chr2 198577585 Intron 7 54129 CEU:1.0;0.951, CHB:1.0;0.776, JPT:1.0;1.0 FUNCTIONAL_SNP rs770661 chr2 198725444 Intron 7 93730 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4850813 chr2 198775982 Intron 7 144268 CEU:1.0;0.94, CHB:0.916;0.775, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13408411 chr2 198825462 Intron 7 193748 CEU:1.0;0.949, CHB:0.925;0.746, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs1902249 chr2 198521356 Intron 7 110358 CEU:0.946;0.85, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs700643 chr2 198601370 Intron 7 30344 CEU:1.0;0.951, CHB:1.0;0.825, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700645 chr2 198605514 Intron 7 26200 CEU:1.0;0.948, CHB:1.0;0.825, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700667 chr2 198677508 Intron 7 45794 CEU:1.0;0.95, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700678 chr2 198705820 Intron 7 74106 CEU:1.0;0.945, CHB:0.913;0.714, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700681 chr2 198711502 Intron 7 79788 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700684 chr2 198713099 Intron 7 81385 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700687 chr2 198721560 Intron 7 89846 CEU:1.0;0.951, CHB:0.922;0.738, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs700692 chr2 198728500 Intron 7 96786 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1518363 chr2 198810131 Intron 7 178417 CEU:1.0;0.944, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;0.7 FUNCTIONAL_SNP rs6757669 chr2 198530355 Intron 7 101359 CEU:0.945;0.847, CHB:1.0;0.69, JPT:0.95;0.86 FUNCTIONAL_SNP rs7561950 chr2 198754244 Intron 7 122530 CEU:1.0;0.951, CHB:0.924;0.796, JPT:1.0;0.66, YRI:1.0;1.0 FUNCTIONAL_SNP rs6741314 chr2 198526088 Intron 7 105626 CEU:0.945;0.847, CHB:1.0;0.69, JPT:0.952;0.866 FUNCTIONAL_SNP rs2037590 chr2 198584775 Intron 7 46939 CEU:1.0;0.951, CHB:1.0;0.774, JPT:1.0;1.0 FUNCTIONAL_SNP rs1983359 chr2 198805098 Intron 7 173384 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs1435568 chr2 198762879 Intron 7 131165 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs1435569 chr2 198718667 Intron 7 86953 CEU:1.0;0.95, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6760891 chr2 198768166 Intron 7 136452 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6734781 chr2 198759973 Intron 7 128259 CEU:1.0;0.902, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4369854 chr2 198800630 Intron 7 168916 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs13000656 chr2 198522126 Intron 7 109588 CEU:0.947;0.852, CHB:0.845;0.555, JPT:0.902;0.813 FUNCTIONAL_SNP rs7604700 chr2 198718630 Intron 7 86916 CEU:1.0;0.951, CHB:0.928;0.756, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs696815 chr2 198688084 Intron 7 56370 CEU:1.0;0.95, CHB:0.928;0.756, JPT:1.0;0.913, YRI:1.0;0.849 LEAD_SNP rs6738825 chr2 198896895 Intron 7 ASSOCIATION 21102463 Crohn's disease 8.39794000867 PLCL1 FUNCTIONAL_SNP rs1064213 chr2 198950240 Coding 6 53345 CEU:1.0;0.855, CHB:1.0;1.0, JPT:0.939;0.882 FUNCTIONAL_SNP rs10192466 chr2 198738019 Intron 3a 158876 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs938929 chr2 198780860 Intron 4 116035 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs7587251 chr2 198930197 Intron 4 33302 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs1369512 chr2 198767132 Intron 5a 129763 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs10497811 chr2 198902909 Intron 5b 6014 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6434945 chr2 198797960 Intron 5b 98935 CEU:1.0;0.924, CHB:1.0;0.945, JPT:1.0;0.943 FUNCTIONAL_SNP rs1518360 chr2 198815303 Intron 5b 81592 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943, YRI:0.766;0.544 FUNCTIONAL_SNP rs1518366 chr2 198809196 Intron 5b 87699 CEU:1.0;0.918, CHB:1.0;0.945, JPT:1.0;0.943 FUNCTIONAL_SNP rs11692344 chr2 198795863 Intron 5b 101032 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs1914690 chr2 198809368 Intron 5b 87527 CEU:1.0;0.915, CHB:1.0;0.945, JPT:1.0;0.941 FUNCTIONAL_SNP rs1318867 chr2 198880481 Intron 5b 16414 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs1371664 chr2 198904465 Intron 6 7570 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10184227 chr2 198894305 Intron 6 2590 CEU:1.0;1.0 FUNCTIONAL_SNP rs10189897 chr2 198813410 Intron 6 83485 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943, YRI:0.766;0.544 FUNCTIONAL_SNP rs13394871 chr2 198846337 Intron 6 50558 CEU:1.0;0.923, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs10198606 chr2 198769739 Intron 6 127156 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs10931796 chr2 198840661 Intron 6 56234 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs10196612 chr2 198894139 Intron 6 2756 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs962210 chr2 198902230 Intron 6 5335 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6753450 chr2 198735031 Intron 6 161864 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs1579695 chr2 198900363 Intron 6 3468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10207433 chr2 198805930 Intron 6 90965 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943, YRI:0.899;0.51 FUNCTIONAL_SNP rs2196172 chr2 198889893 Intron 6 7002 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1607373 chr2 198800532 Intron 6 96363 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943, YRI:0.766;0.544 FUNCTIONAL_SNP rs10177758 chr2 198858917 Intron 6 37978 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943, YRI:0.77;0.572 FUNCTIONAL_SNP rs1401090 chr2 198808578 Intron 6 88317 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs700691 chr2 198727852 Intron 6 169043 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.941 FUNCTIONAL_SNP rs976179 chr2 198880378 Intron 6 16517 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1541953 chr2 198898344 Intron 6 1449 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2880389 chr2 198801707 Intron 6 95188 CEU:1.0;0.818, CHB:1.0;0.945, JPT:1.0;0.943 FUNCTIONAL_SNP rs7571869 chr2 198841615 Intron 6 55280 CEU:1.0;0.924, CHB:1.0;0.798, JPT:0.931;0.767, YRI:0.77;0.572 FUNCTIONAL_SNP rs1595823 chr2 198891799 Intron 6 5096 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs10206714 chr2 198906481 Intron 6 9586 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1866666 chr2 198940607 Intron 6 43712 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs4410288 chr2 198819824 Intron 7 77071 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs1036333 chr2 198943787 Intron 7 46892 CEU:1.0;0.855, CHB:1.0;1.0, JPT:0.939;0.882, YRI:0.906;0.583 FUNCTIONAL_SNP rs10497813 chr2 198914072 Intron 7 17177 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs4850816 chr2 198789765 Intron 7 107130 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs4850817 chr2 198795204 Intron 7 101691 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs2117339 chr2 198915734 Intron 7 18839 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs7587043 chr2 198841729 Intron 7 55166 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs7572733 chr2 198929806 Intron 7 32911 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs700679 chr2 198706916 Intron 7 189979 CEU:0.919;0.812, CHB:1.0;0.946, JPT:1.0;0.938 FUNCTIONAL_SNP rs10497809 chr2 198825668 Intron 7 71227 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943, YRI:0.766;0.544 FUNCTIONAL_SNP rs1518359 chr2 198847383 Intron 7 49512 CEU:1.0;0.863, CHB:1.0;0.941, JPT:1.0;0.933 FUNCTIONAL_SNP rs1518364 chr2 198809975 Intron 7 86920 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943, YRI:0.766;0.544 FUNCTIONAL_SNP rs1595824 chr2 198874006 Intron 7 22889 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11683222 chr2 198884028 Intron 7 12867 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1369511 chr2 198746115 Intron 7 150780 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943 FUNCTIONAL_SNP rs745899 chr2 198908040 Intron 7 11145 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1866664 chr2 198860428 Intron 7 36467 CEU:1.0;0.924, CHB:1.0;0.947, JPT:1.0;0.943, YRI:0.946;0.52 LEAD_SNP rs7595412 chr2 198962243 Intron 6 ASSOCIATION 18776929 Hip bone size 5.69897000434 PLCL1 LEAD_SNP rs988583 chr2 198987935 Intron 7 ASSOCIATION 21507922 Neutrophil count 5.22184874962 PLCL1 LEAD_SNP rs12617311 chr2 199632565 Intron 7 ASSOCIATION 21102462 Menarche (age at onset) 12.2218487496 PLCL1 - SATB2 LEAD_SNP rs1992950 chr2 200290359 Intron 6 ASSOCIATION 20228799 Ulcerative colitis 5.30102999566 SATB2 FUNCTIONAL_SNP rs1014497 chr2 200241229 Intron 2c 49130 CEU:1.0;0.908, CHB:1.0;0.91, JPT:0.93;0.761 FUNCTIONAL_SNP rs10497836 chr2 200288718 Intron 5a 1641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs987281 chr2 200261230 Intron 5b 29129 CEU:1.0;0.908, CHB:1.0;0.909, JPT:0.931;0.766 FUNCTIONAL_SNP rs6708487 chr2 200260143 Intron 5b 30216 CEU:1.0;0.908, CHB:1.0;0.91, JPT:0.931;0.766, YRI:1.0;0.528 FUNCTIONAL_SNP rs1542243 chr2 200295114 Intron 5b 4755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4675576 chr2 200279234 Intron 5b 11125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs2345729 chr2 200294206 Intron 6 3847 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1466032 chr2 200262867 Intron 6 27492 CEU:1.0;0.908, CHB:1.0;0.91, JPT:0.931;0.766 FUNCTIONAL_SNP rs930616 chr2 200185915 Intron 6 104444 CEU:1.0;0.821, CHB:1.0;0.868, JPT:0.931;0.766 FUNCTIONAL_SNP rs1037135 chr2 200194188 Intron 6 96171 CEU:1.0;0.821, CHB:1.0;0.868, JPT:0.931;0.766 FUNCTIONAL_SNP rs1542242 chr2 200294969 Intron 6 4610 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7577003 chr2 200275514 Intron 7 14845 CEU:1.0;0.908, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs895882 chr2 200303015 Intron 7 12656 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs7597624 chr2 200211783 Intron 7 78576 CEU:1.0;0.821, CHB:1.0;0.868, JPT:0.931;0.766 FUNCTIONAL_SNP rs11686971 chr2 200184677 Intron 7 105682 CEU:1.0;0.859, CHB:1.0;0.818, JPT:0.931;0.766 FUNCTIONAL_SNP rs1348813 chr2 200245245 Intron 7 45114 CEU:1.0;0.908, CHB:1.0;0.91, JPT:0.931;0.766 FUNCTIONAL_SNP rs2305262 chr2 200246318 Intron 7 44041 CEU:1.0;0.908, CHB:1.0;0.91, JPT:0.931;0.766 FUNCTIONAL_SNP rs7569519 chr2 200179822 Intron 7 110537 CEU:1.0;0.821, CHB:1.0;0.868, JPT:0.931;0.766 LEAD_SNP rs7605378 chr2 200676926 Intergenic 6 ASSOCIATION 21573128 Osteoporosis 7.69897000434 LOC348751 FUNCTIONAL_SNP rs769957 chr2 200695524 Intron 4 18598 CEU:1.0;0.846, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs796363 chr2 200693668 Intron 5a 16742 CEU:1.0;0.846, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs2346662 chr2 200679158 Intron 5b 2232 CEU:1.0;0.846, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10194076 chr2 200677663 Intron 5b 737 CEU:1.0;0.844, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs2689766 chr2 200697539 Intron 6 20613 CEU:1.0;0.906, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs769954 chr2 200692159 Intron 7 15233 CEU:1.0;0.846, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs2689763 chr2 200689555 Intron 7 12629 CEU:1.0;0.846, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs769958 chr2 200695901 Intron 7 18975 CEU:1.0;0.846, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs2577852 chr2 200687248 Intron 7 10322 CEU:1.0;0.846, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 LEAD_SNP rs1569175 chr2 201021954 Intergenic 6 ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 6.04575749056 C2orf47 - SPATS2L FUNCTIONAL_SNP rs4673704 chr2 200973079 Intergenic 7 48875 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12612420 chr2 201158122 Intergenic 7 ASSOCIATION 19727025 Exercise (leisure time) 5.09691001301 C2orf47 - SPATS2L FUNCTIONAL_SNP rs978656 chr2 201190628 Intron 6 32506 CEU:1.0;0.918 FUNCTIONAL_SNP rs17592517 chr2 201156935 Intergenic 7 1187 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17385675 chr2 202807196 Intergenic 6 ASSOCIATION 20195266 Response to antipsychotic treatment 5.52287874528 CDK15 - FZD7 FUNCTIONAL_SNP rs16838482 chr2 202814422 Intergenic 4 7226 CEU:1.0;1.0 LEAD_SNP rs1521882 chr2 202949851 Intron 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.09691001301 FLJ39061 FUNCTIONAL_SNP rs939745 chr2 202941310 Intron 6 8541 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.87 FUNCTIONAL_SNP rs1521883 chr2 202949672 Intron 7 179 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6725887 chr2 203745885 Intron 6 ASSOCIATION 21378990 Coronary heart disease 9.0 WDR12 ASSOCIATION 19198609 Myocardial infarction (early onset) 8.0 WDR12 FUNCTIONAL_SNP rs35212307 chr2 203765756 Coding 7 19871 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6722332 chr2 203745327 Exon,non-coding 7 558 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2351524 chr2 203880992 Exon,non-coding 5b 135107 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6705330 chr2 203662197 Intron 5a 83688 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs6719001 chr2 203777903 Intron 5b 32018 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4675310 chr2 203880834 Intron 5b 134949 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3845800 chr2 203734365 Intron 6 11520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4510208 chr2 203734866 Intron 7 11019 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7582720 chr2 203753072 Intron 7 7187 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1541853 chr2 203835177 Intron 7 89292 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6435169 chr2 203753016 Intron 7 7131 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7560547 chr2 203757916 Intron 7 12031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7605484 chr2 203724495 Intron 7 21390 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6723704 chr2 203738664 Intergenic 7 7221 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11888559 chr2 204165171 Intergenic 5b ASSOCIATION 20966902 Height 5.69897000434 CYP20A1 LEAD_SNP rs1376877 chr2 204272090 Intron 6 ASSOCIATION 17903303 Subclinical atherosclerosis traits (other) 6.39794000867 ABI2 FUNCTIONAL_SNP rs1048013 chr2 204154552 Coding 6 117538 CEU:0.96;0.921, CHB:1.0;0.948, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs3814365 chr2 204305093 Coding 5b 33003 CEU:1.0;0.923, CHB:0.945;0.847, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs11679740 chr2 204315394 Intron 5a 43304 CEU:1.0;0.961, CHB:0.944;0.892, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs11693128 chr2 204115901 Intron 5b 156189 CEU:0.96;0.921, CHB:1.0;0.948, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs2352079 chr2 204316532 Intron 5b 44442 CEU:1.0;0.961, CHB:0.947;0.896, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs11675251 chr2 204249399 Intron 6 22691 CEU:1.0;0.882, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11686036 chr2 204241639 Intron 7 30451 CEU:1.0;0.961, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2351774 chr2 204099222 Intergenic 7 172868 CEU:0.959;0.883, CHB:1.0;0.948, JPT:1.0;0.945, YRI:1.0;0.907 FUNCTIONAL_SNP rs7581515 chr2 204093040 Intergenic 7 179050 CEU:0.959;0.883, CHB:0.944;0.845, JPT:1.0;0.945, YRI:1.0;0.817 FUNCTIONAL_SNP rs3769678 chr2 204276327 Intron 7 4237 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17477113 chr2 204366453 Intron 7 94363 CEU:1.0;0.961, CHB:0.947;0.896, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11683935 chr2 204377871 Intron 7 105781 CEU:1.0;0.96, CHB:0.947;0.896, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11687186 chr2 204319839 Intron 7 47749 CEU:1.0;0.875, CHB:0.947;0.896, JPT:1.0;0.938, YRI:1.0;1.0 FUNCTIONAL_SNP rs3731694 chr2 204116660 Intron 7 155430 CEU:0.96;0.921, CHB:1.0;0.948, JPT:1.0;0.945, YRI:1.0;0.84 LEAD_SNP rs231735 chr2 204693876 Intergenic 7 ASSOCIATION 19503088 Rheumatoid arthritis 8.22184874962 KRT18P39 - CTLA4 FUNCTIONAL_SNP rs231734 chr2 204694280 Intergenic 6 404 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3115969 chr2 204694805 Intergenic 6 929 CEU:1.0;1.0, CHB:1.0;0.865, JPT:1.0;0.877, YRI:1.0;0.961 FUNCTIONAL_SNP rs863603 chr2 204694974 Intergenic 6 1098 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs231733 chr2 204694465 Intergenic 7 589 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1024161 chr2 204721752 Intergenic 6 ASSOCIATION 20596022 Alopecia areata 12.3979400087 KRT18P39 - CTLA4 FUNCTIONAL_SNP rs231775 chr2 204732714 Coding 7 10962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11571292 chr2 204720139 Intergenic 5a 1613 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs231770 chr2 204729153 Intergenic 5a 7401 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.542 FUNCTIONAL_SNP rs231779 chr2 204734487 Intron 5b 12735 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.707 FUNCTIONAL_SNP rs12992492 chr2 204701554 Intergenic 7 20198 CEU:1.0;0.913, CHB:1.0;0.882, JPT:1.0;0.948 FUNCTIONAL_SNP rs231725 chr2 204740675 Intergenic 7 18923 CEU:1.0;0.803, CHB:1.0;0.898, JPT:1.0;0.778 FUNCTIONAL_SNP rs231726 chr2 204740866 Intergenic 7 19114 CEU:1.0;0.803, CHB:1.0;0.899, JPT:1.0;0.778 FUNCTIONAL_SNP rs231727 chr2 204741550 Intergenic 7 19798 CEU:1.0;0.803, CHB:1.0;0.899, JPT:1.0;0.778 FUNCTIONAL_SNP rs11571315 chr2 204730901 Intergenic 7 9149 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs736611 chr2 204730465 Intergenic 7 8713 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.759 FUNCTIONAL_SNP rs926169 chr2 204722752 Intergenic 7 1000 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1427676 chr2 204741166 Intergenic 7 19414 CEU:1.0;0.803, CHB:1.0;0.899, JPT:1.0;0.778, YRI:0.819;0.515 FUNCTIONAL_SNP rs1427680 chr2 204729795 Intergenic 7 8043 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.759 FUNCTIONAL_SNP rs3116513 chr2 204694611 Intergenic 7 27141 CEU:1.0;0.918, CHB:1.0;0.841, JPT:1.0;0.949 LEAD_SNP rs3087243 chr2 204738919 Intergenic 4 ASSOCIATION 20453842 Rheumatoid arthritis 8.0 CTLA4 ASSOCIATION 19430480 Type 1 diabetes 15.0 CTLA4 ASSOCIATION 18978792 Type 1 diabetes 10.096910013 CTLA4 FUNCTIONAL_SNP rs13030124 chr2 204694263 Intergenic 5a 44656 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs6745050 chr2 204691538 Intergenic 5a 47381 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.5 FUNCTIONAL_SNP rs231811 chr2 204713891 Intergenic 5b 25028 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs1024162 chr2 204722159 Intergenic 5b 16760 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.527 FUNCTIONAL_SNP rs1968351 chr2 204693736 Intergenic 6 45183 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs11571293 chr2 204717713 Intergenic 6 21206 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs231806 chr2 204709349 Intergenic 6 29570 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs11571291 chr2 204721132 Intergenic 7 17787 CEU:0.917;0.807, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.542 FUNCTIONAL_SNP rs11571304 chr2 204708776 Intergenic 7 30143 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs11571316 chr2 204731089 Intergenic 7 7830 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs231804 chr2 204708646 Intergenic 7 30273 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.944 LEAD_SNP rs4675374 chr2 204802578 Intron 7 ASSOCIATION 20190752 Celiac disease 8.22184874962 ICOS FUNCTIONAL_SNP rs3923093 chr2 204798020 Intergenic 5b 4558 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs4522587 chr2 204811623 Intron 5b 9045 CEU:1.0;1.0, CHB:1.0;0.615, YRI:0.875;0.56 FUNCTIONAL_SNP rs11571306 chr2 204799102 Intergenic 5b 3476 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.897 FUNCTIONAL_SNP rs10932031 chr2 204804494 Intron 6 1916 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.812 FUNCTIONAL_SNP rs10932034 chr2 204812993 Intron 7 10415 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.548, YRI:0.821;0.522 FUNCTIONAL_SNP rs4675377 chr2 204814676 Intron 7 12098 CEU:1.0;1.0, YRI:0.935;0.604 FUNCTIONAL_SNP rs11883722 chr2 204800845 Intergenic 7 1733 CEU:1.0;0.928, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4325730 chr2 204797790 Intergenic 7 4788 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;1.0, YRI:0.951;0.904 LEAD_SNP rs2335704 chr2 205864832 Intron 7 ASSOCIATION 20694014 Tuberculosis 5.69897000434 PARD3B LEAD_SNP rs1207421 chr2 206150594 Intron 7 ASSOCIATION 18471798 Knee osteoarthritis 5.22184874962 PARD3B LEAD_SNP rs11884476 chr2 206318593 Intron 7 ASSOCIATION 21502085 AIDS progression 8.52287874528 PARD3B FUNCTIONAL_SNP rs10185378 chr2 206305156 Coding 7 13437 CEU:1.0;1.0, YRI:1.0;0.718 FUNCTIONAL_SNP rs7571625 chr2 206310653 Intron 6 7940 CEU:1.0;1.0, YRI:1.0;0.808 FUNCTIONAL_SNP rs10175496 chr2 206302083 Intron 7 16510 CEU:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs11886997 chr2 206331391 Intron 7 12798 CEU:1.0;1.0 FUNCTIONAL_SNP rs11904683 chr2 206318410 Intron 7 183 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12694024 chr2 206294418 Intron 7 24175 CEU:1.0;1.0, YRI:0.826;0.583 FUNCTIONAL_SNP rs11896375 chr2 206307548 Intron 7 11045 CEU:1.0;1.0, YRI:0.89;0.714 FUNCTIONAL_SNP rs11901511 chr2 206306906 Intron 7 11687 CEU:1.0;1.0, YRI:1.0;0.793 FUNCTIONAL_SNP rs733002 chr2 206317823 Intron 7 770 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12987084 chr2 206305926 Intron 7 12667 CEU:1.0;1.0, YRI:0.89;0.714 FUNCTIONAL_SNP rs7562729 chr2 206313300 Intron 7 5293 CEU:1.0;1.0 LEAD_SNP rs7603514 chr2 206836612 Intergenic 6 ASSOCIATION 19553259 Obesity (extreme) 5.09691001301 NRP2 - INO80D LEAD_SNP rs2277912 chr2 207634236 Intron 7 ASSOCIATION 20966902 Height 5.30102999566 FASTKD2 LEAD_SNP rs2242073 chr2 208994045 Intron 7 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.09691001301 CRYGC LEAD_SNP rs2286963 chr2 211060050 Coding 5b ASSOCIATION 20037589 Serum metabolites 59.5228787453 ACADL FUNCTIONAL_SNP rs7601356 chr2 211056657 Intron 6 3393 CEU:1.0;1.0, CHB:1.0;0.806, JPT:1.0;0.873, YRI:1.0;1.0 FUNCTIONAL_SNP rs12613036 chr2 211007521 Intron 7 52529 CEU:1.0;0.958, CHB:1.0;0.806, JPT:1.0;0.873, YRI:1.0;1.0 FUNCTIONAL_SNP rs7558218 chr2 211103445 Intergenic 7 43395 CEU:1.0;1.0, CHB:1.0;0.851, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs3764913 chr2 211074909 Intron 7 14859 CEU:1.0;1.0, CHB:1.0;0.851, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs3738934 chr2 210874246 Intron 7 185804 CEU:0.955;0.805, CHB:0.749;0.561, JPT:0.855;0.731, YRI:1.0;0.68 FUNCTIONAL_SNP rs7557847 chr2 211133150 Intergenic 7 73100 CEU:1.0;0.959, CHB:0.756;0.53, JPT:1.0;0.797, YRI:1.0;0.9 LEAD_SNP rs12619285 chr2 213824045 Intron 4 ASSOCIATION 19198610 Plasma eosinophil count 9.30102999566 ERBB4 - IKZF2 FUNCTIONAL_SNP rs10189498 chr2 213826151 Intron 4 2106 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.635 FUNCTIONAL_SNP rs7560454 chr2 213818578 Intron 5b 5467 CEU:1.0;1.0, CHB:0.939;0.753, JPT:1.0;0.785 FUNCTIONAL_SNP rs1482577 chr2 213835124 Intron 5b 11079 CEU:1.0;0.91, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.848;0.517 FUNCTIONAL_SNP rs6750754 chr2 213830187 Intron 6 6142 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0, YRI:0.959;0.819 FUNCTIONAL_SNP rs2170572 chr2 213817219 Intron 6 6826 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13022407 chr2 213836206 Intron 7 12161 CEU:1.0;0.91, CHB:1.0;0.907, JPT:1.0;1.0, YRI:0.852;0.526 FUNCTIONAL_SNP rs6740906 chr2 213832722 Intron 7 8677 CEU:1.0;0.91, CHB:1.0;0.863, JPT:1.0;1.0 LEAD_SNP rs3768716 chr2 215635794 Intron 7 ASSOCIATION 21124317 Neuroblastoma 12.3010299957 BARD1 FUNCTIONAL_SNP rs2070096 chr2 215645545 Coding 6 9751 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.863 FUNCTIONAL_SNP rs17488049 chr2 215651750 Intron 5b 15956 CEU:1.0;1.0, CHB:1.0;0.911, JPT:0.922;0.791 FUNCTIONAL_SNP rs3768707 chr2 215645135 Intron 6 9341 CEU:1.0;0.953 FUNCTIONAL_SNP rs3768708 chr2 215645046 Intron 6 9252 CEU:1.0;0.952 FUNCTIONAL_SNP rs17487827 chr2 215644335 Intron 6 8541 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.863 FUNCTIONAL_SNP rs7587476 chr2 215653887 Intron 7 18093 CEU:1.0;0.953 FUNCTIONAL_SNP rs1542173 chr2 215657560 Intron 7 21766 CEU:1.0;0.953 FUNCTIONAL_SNP rs17487792 chr2 215643500 Intron 7 7706 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.863 FUNCTIONAL_SNP rs6726763 chr2 215681580 Intergenic 7 45786 CEU:0.95;0.821 FUNCTIONAL_SNP rs13001462 chr2 215678346 Intergenic 7 42552 CEU:0.95;0.821 LEAD_SNP rs6435862 chr2 215672546 Intron 4 ASSOCIATION 19412175 Neuroblastoma (high-risk) 17.0457574906 BARD1 LEAD_SNP rs7590720 chr2 216898658 Intergenic 5a ASSOCIATION 19581569 Alcohol dependence 8.0 MREG - PECR FUNCTIONAL_SNP rs13006614 chr2 216876204 Intron 5b 22454 CEU:1.0;0.855, CHB:1.0;0.943, JPT:0.934;0.871 FUNCTIONAL_SNP rs1991533 chr2 216908910 Intron 6 10252 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs4674048 chr2 216900023 Intergenic 7 1365 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4674051 chr2 216907512 Intron 7 8854 CEU:1.0;0.947, CHB:1.0;0.943, JPT:1.0;1.0, YRI:0.936;0.737 FUNCTIONAL_SNP rs934154 chr2 216901933 Intergenic 7 3275 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs934156 chr2 216901482 Intergenic 7 2824 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.942 FUNCTIONAL_SNP rs6435930 chr2 216885852 Intergenic 7 12806 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.942 LEAD_SNP rs6435957 chr2 217878209 Intergenic 6 ASSOCIATION 20195514 Primary tooth development (number of teeth) 6.39794000867 TNP1 - DIRC3 FUNCTIONAL_SNP rs10207736 chr2 217863554 Intergenic 7 14655 CEU:1.0;1.0, CHB:1.0;0.851, JPT:1.0;0.888, YRI:0.957;0.812 LEAD_SNP rs13387042 chr2 217905832 Intergenic 7 ASSOCIATION 21263130 Breast cancer 9.69897000434 TNP1 - DIRC3 ASSOCIATION 20872241 Breast cancer 5.04575749056 TNP1 - DIRC3 ASSOCIATION 20453838 Breast cancer 9.69897000434 TNP1 - DIRC3 ASSOCIATION 19330030 Breast cancer 7.69897000434 TNP1 - DIRC3 ASSOCIATION 17529974 Breast cancer 13.0 TNP1 - DIRC3 FUNCTIONAL_SNP rs12613955 chr2 217916052 Intergenic 6 10220 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13426489 chr2 217906246 Intergenic 7 414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13412666 chr2 217905779 Intergenic 7 53 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12620095 chr2 217907514 Intergenic 7 1682 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6721996 chr2 217909463 Intergenic 7 3631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4442975 chr2 217920769 Intergenic 7 14937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.942;0.609 LEAD_SNP rs1351164 chr2 218271898 Intron 7 ASSOCIATION 20881960 Height 13.6989700043 DIRC3 FUNCTIONAL_SNP rs10932715 chr2 218259783 Intron 5b 12115 CEU:1.0;0.82, CHB:1.0;0.911, JPT:0.902;0.813 FUNCTIONAL_SNP rs12232972 chr2 218257272 Intron 6 14626 CEU:1.0;0.82, CHB:1.0;0.911, JPT:0.902;0.813 FUNCTIONAL_SNP rs10183694 chr2 218279923 Intron 6 8025 CEU:1.0;0.928, YRI:0.935;0.822 FUNCTIONAL_SNP rs13388148 chr2 218281500 Intron 7 9602 CEU:1.0;0.807, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs1478581 chr2 218292652 Intron 7 20754 CEU:1.0;0.82, CHB:1.0;0.911, JPT:1.0;0.953 LEAD_SNP rs2571445 chr2 218683154 Coding 5b ASSOCIATION 20010834 Pulmonary function 12.0 TNS1 FUNCTIONAL_SNP rs918949 chr2 218674697 Coding 5b 8457 CEU:1.0;0.96 FUNCTIONAL_SNP rs1063281 chr2 218668732 Exon,non-coding 5b 14422 CEU:1.0;0.96, JPT:0.885;0.645 FUNCTIONAL_SNP rs3791979 chr2 218667372 Exon,non-coding 5b 15782 CEU:1.0;0.96, CHB:0.778;0.524, JPT:0.885;0.645, YRI:0.918;0.638 FUNCTIONAL_SNP rs3088214 chr2 218667836 Exon,non-coding 5b 15318 CEU:1.0;0.96 FUNCTIONAL_SNP rs1035672 chr2 218675199 Intron 5b 7955 CEU:1.0;0.96 FUNCTIONAL_SNP rs1035673 chr2 218675533 Intron 6 7621 CEU:1.0;0.958 FUNCTIONAL_SNP rs12998823 chr2 218673765 Intron 7 9389 CEU:1.0;0.955 LEAD_SNP rs11676348 chr2 219010146 Intergenic 2b ASSOCIATION 21297633 Ulcerative colitis 10.0 CXCR2 - CXCR1 FUNCTIONAL_SNP rs10804264 chr2 218955809 Intergenic 5b 54337 CEU:1.0;0.888, CHB:1.0;0.945, JPT:1.0;1.0, YRI:0.904;0.542 FUNCTIONAL_SNP rs4674258 chr2 218990586 Intergenic 5b 19560 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.715 FUNCTIONAL_SNP rs6436032 chr2 218982862 Intergenic 6 27284 CEU:1.0;0.888, CHB:0.943;0.889, JPT:1.0;1.0, YRI:0.863;0.57 FUNCTIONAL_SNP rs4674250 chr2 218977531 Intergenic 6 32615 CEU:0.959;0.883 FUNCTIONAL_SNP rs13007992 chr2 218964051 Intergenic 7 46095 CEU:1.0;0.924, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.741 LEAD_SNP rs7349332 chr2 219756383 Intron 5b ASSOCIATION 20585627 Common traits (Other) 13.5228787453 WNT10A ASSOCIATION 19896111 Hair morphology 6.0 WNT10A LEAD_SNP rs1052483 chr2 219934348 Intergenic 6 ASSOCIATION 18391951 Height 6.0 IHH - NHEJ1 FUNCTIONAL_SNP rs13386793 chr2 219972574 Intron 5b 38226 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;0.839 FUNCTIONAL_SNP rs12104660 chr2 219972984 Intron 7 38636 CEU:1.0;0.932, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;0.839 LEAD_SNP rs6724465 chr2 219943846 Intron 6 ASSOCIATION 18391952 Height 7.69897000434 NHEJ1 FUNCTIONAL_SNP rs13419740 chr2 219969097 Intron 4 25251 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs13410177 chr2 219974852 Intron 5b 31006 CEU:1.0;0.933, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs7598980 chr2 219968422 Intron 6 24576 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs6752757 chr2 219943801 Intron 7 45 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs16859517 chr2 219949184 Intron 7 ASSOCIATION 20189936 Height 5.30102999566 NHEJ1 LEAD_SNP rs10932886 chr2 221720088 Intergenic 5b ASSOCIATION 20100581 Brain imaging 0 - FUNCTIONAL_SNP rs610510 chr2 221713734 Intergenic 5a 6354 CEU:1.0;0.92 FUNCTIONAL_SNP rs8179787 chr2 221714058 Intergenic 6 6030 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.754 FUNCTIONAL_SNP rs10174155 chr2 221725246 Intergenic 7 5158 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91 FUNCTIONAL_SNP rs646445 chr2 221725511 Intergenic 7 5423 CEU:1.0;0.96, CHB:1.0;0.789, JPT:1.0;0.657 FUNCTIONAL_SNP rs10177014 chr2 221725744 Intergenic 7 5656 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;0.91, YRI:0.943;0.639 FUNCTIONAL_SNP rs631486 chr2 221722531 Intergenic 7 2443 CEU:1.0;0.96, CHB:1.0;0.789, JPT:1.0;0.657 LEAD_SNP rs10498091 chr2 221899444 Intergenic 5a ASSOCIATION 17903301 Echocardiographic traits 5.22184874962 RPL23P4 - EPHA4 FUNCTIONAL_SNP rs12471062 chr2 221905185 Intergenic 5b 5741 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs16862098 chr2 221902103 Intergenic 7 2659 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.844 LEAD_SNP rs824931 chr2 222801699 Intergenic 7 ASSOCIATION 19851299 Body mass index 5.52287874528 RPL23P5 - HSPA9P1 FUNCTIONAL_SNP rs732534 chr2 222811585 Intergenic 5b 9886 CEU:0.954;0.909, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4085400 chr2 222778167 Intergenic 6 23532 CEU:0.954;0.909, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;1.0 FUNCTIONAL_SNP rs824919 chr2 222786132 Intergenic 7 15567 CEU:0.951;0.904, CHB:1.0;1.0, JPT:1.0;0.883, YRI:1.0;1.0 FUNCTIONAL_SNP rs824924 chr2 222795727 Intergenic 7 5972 CEU:0.954;0.909, CHB:1.0;0.94, JPT:1.0;0.897, YRI:1.0;1.0 FUNCTIONAL_SNP rs824938 chr2 222815785 Intergenic 7 14086 CEU:0.954;0.909, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;1.0 LEAD_SNP rs12621643 chr2 223917983 Coding 4 ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 5.52287874528 KCNE4 LEAD_SNP rs1440072 chr2 223936738 Intron 5b ASSOCIATION 20966902 Body mass index 5.39794000867 KCNE4 - TRNAK39P ASSOCIATION 20966902 Waist circumference 6.09691001301 KCNE4 - TRNAK39P LEAD_SNP rs16864755 chr2 224274622 Intergenic 7 ASSOCIATION 20200953 Osteoporosis-related phenotypes 5.39794000867 TRNAK39P - SCG2 LEAD_SNP rs1517484 chr2 226237910 Intergenic 7 ASSOCIATION 18937294 Attention deficit hyperactivity disorder (time to onset) 6.30102999566 DOCK10 - KIAA1486 FUNCTIONAL_SNP rs1517487 chr2 226242191 Intergenic 7 4281 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1517502 chr2 226234751 Intergenic 7 3159 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 LEAD_SNP rs7578326 chr2 227020653 Intergenic 4 ASSOCIATION 20581827 Type 2 diabetes 19.3010299957 KIAA1486 - IRS1 FUNCTIONAL_SNP rs1515098 chr2 227073854 Intergenic 4 53201 CEU:0.954;0.909 FUNCTIONAL_SNP rs2943635 chr2 227077377 Intergenic 5b 56724 CEU:0.954;0.909 FUNCTIONAL_SNP rs2943651 chr2 227047414 Intron 5b 26761 CEU:1.0;0.954 FUNCTIONAL_SNP rs2943634 chr2 227068080 Intergenic 6 47427 CEU:1.0;0.954 FUNCTIONAL_SNP rs2176042 chr2 227058625 Intergenic 6 37972 CEU:0.949;0.901 FUNCTIONAL_SNP rs2943632 chr2 227054381 Intergenic 7 33728 CEU:1.0;0.954 FUNCTIONAL_SNP rs952227 chr2 227062080 Intergenic 7 41427 CEU:1.0;0.954 FUNCTIONAL_SNP rs2943653 chr2 227047771 Intron 7 27118 CEU:1.0;0.954 FUNCTIONAL_SNP rs13405357 chr2 227022036 Intergenic 7 1383 CEU:1.0;0.955, JPT:0.927;0.754 FUNCTIONAL_SNP rs13423088 chr2 227026864 Intergenic 7 6211 CEU:0.954;0.909, JPT:0.927;0.754 FUNCTIONAL_SNP rs2972152 chr2 227066574 Intergenic 7 45921 CEU:0.951;0.905 FUNCTIONAL_SNP rs2972153 chr2 227066471 Intergenic 7 45818 CEU:0.954;0.909 LEAD_SNP rs2943634 chr2 227068080 Intergenic 6 ASSOCIATION 17634449 Coronary heart disease 6.69897000434 KIAA1486 - IRS1 FUNCTIONAL_SNP rs952227 chr2 227062080 Intergenic 7 6000 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2943641 chr2 227093745 Intergenic 7 ASSOCIATION 19734900 Type 2 diabetes and other traits 11.0457574906 KIAA1486 - IRS1 FUNCTIONAL_SNP rs2943645 chr2 227099180 Intergenic 5a 5435 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.711 FUNCTIONAL_SNP rs2943659 chr2 227125254 Intergenic 5a 31509 CEU:1.0;0.942, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs1399626 chr2 227125416 Intergenic 5a 31671 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713548 chr2 227156662 Intergenic 5a 62917 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2673135 chr2 227151596 Intergenic 5a 57851 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2458993 chr2 227156730 Intergenic 5a 62985 CEU:0.955;0.873, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2673142 chr2 227156645 Intergenic 5a 62900 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943656 chr2 227121918 Intergenic 5b 28173 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943646 chr2 227099534 Intergenic 5b 5789 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.711 FUNCTIONAL_SNP rs2943651 chr2 227047414 Intron 5b 46331 CEU:1.0;0.833, JPT:1.0;0.731 FUNCTIONAL_SNP rs1515116 chr2 227176093 Intergenic 5b 82348 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2673140 chr2 227159867 Intergenic 5b 66122 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943634 chr2 227068080 Intergenic 6 25665 CEU:1.0;0.833, CHB:1.0;0.604, JPT:1.0;0.731 FUNCTIONAL_SNP rs2972144 chr2 227101411 Intergenic 6 7666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs925735 chr2 227179630 Intergenic 6 85885 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713540 chr2 227140486 Intergenic 6 46741 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs1399627 chr2 227083411 Intergenic 6 10334 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713549 chr2 227157209 Intergenic 6 63464 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713557 chr2 227171603 Intergenic 6 77858 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs1515104 chr2 227092405 Intergenic 6 1340 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1515110 chr2 227122216 Intergenic 6 28471 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2673131 chr2 227141248 Intergenic 7 47503 CEU:0.954;0.871, CHB:0.813;0.56, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943632 chr2 227054381 Intergenic 7 39364 CEU:1.0;0.833, CHB:1.0;0.603, JPT:1.0;0.731 FUNCTIONAL_SNP rs2943640 chr2 227093585 Intergenic 7 160 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2972143 chr2 227116365 Intergenic 7 22620 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943650 chr2 227105921 Intergenic 7 12176 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs952227 chr2 227062080 Intergenic 7 31665 CEU:1.0;0.833, CHB:1.0;0.604, JPT:1.0;0.731 FUNCTIONAL_SNP rs2943652 chr2 227108446 Intergenic 7 14701 CEU:1.0;0.957, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943653 chr2 227047771 Intron 7 45974 CEU:1.0;0.833, JPT:1.0;0.73 FUNCTIONAL_SNP rs2176040 chr2 227092802 Intergenic 7 943 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs908252 chr2 227180619 Intergenic 7 86874 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943660 chr2 227128543 Intergenic 7 34798 CEU:0.955;0.911, CHB:0.811;0.557, JPT:1.0;1.0 FUNCTIONAL_SNP rs2138157 chr2 227103717 Intergenic 7 9972 CEU:0.956;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713539 chr2 227137125 Intergenic 7 43380 CEU:0.954;0.834, CHB:0.838;0.606, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713541 chr2 227141768 Intergenic 7 48023 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713552 chr2 227181683 Intergenic 7 87938 CEU:0.955;0.873, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713559 chr2 227164504 Intergenic 7 70759 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs1515099 chr2 227128899 Intergenic 7 35154 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs1515100 chr2 227128917 Intergenic 7 35172 CEU:0.955;0.913, CHB:0.837;0.605, JPT:1.0;1.0 FUNCTIONAL_SNP rs1515108 chr2 227123086 Intergenic 7 29341 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2972136 chr2 227107035 Intergenic 7 13290 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2673134 chr2 227145757 Intergenic 7 52012 CEU:0.956;0.913, CHB:0.838;0.606, JPT:1.0;1.0 FUNCTIONAL_SNP rs2972146 chr2 227100698 Intergenic 7 6953 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2972147 chr2 227099854 Intergenic 7 6109 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.942;0.66 FUNCTIONAL_SNP rs2673141 chr2 227159177 Intergenic 7 65432 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943657 chr2 227123439 Intergenic 7 29694 CEU:0.956;0.913, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943658 chr2 227123584 Intergenic 7 29839 CEU:1.0;0.955, CHB:0.838;0.607, JPT:1.0;1.0 LEAD_SNP rs2943650 chr2 227105921 Intergenic 7 ASSOCIATION 21706003 Adiposity 10.3979400087 KIAA1486 - IRS1 FUNCTIONAL_SNP rs2943645 chr2 227099180 Intergenic 5a 6741 CEU:1.0;0.955, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943659 chr2 227125254 Intergenic 5a 19333 CEU:1.0;0.945, CHB:0.875;0.766, JPT:1.0;1.0 FUNCTIONAL_SNP rs1399626 chr2 227125416 Intergenic 5a 19495 CEU:0.953;0.908, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713548 chr2 227156662 Intergenic 5a 50741 CEU:0.957;0.915, CHB:0.875;0.766, JPT:1.0;1.0 FUNCTIONAL_SNP rs2673135 chr2 227151596 Intergenic 5a 45675 CEU:0.957;0.915, CHB:0.875;0.766, JPT:1.0;1.0 FUNCTIONAL_SNP rs2458993 chr2 227156730 Intergenic 5a 50809 CEU:0.956;0.875, CHB:0.875;0.766, JPT:1.0;1.0 FUNCTIONAL_SNP rs2673142 chr2 227156645 Intergenic 5a 50724 CEU:0.953;0.908, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943656 chr2 227121918 Intergenic 5b 15997 CEU:0.953;0.908, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943646 chr2 227099534 Intergenic 5b 6387 CEU:1.0;0.955, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs1515116 chr2 227176093 Intergenic 5b 70172 CEU:0.953;0.908, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2673140 chr2 227159867 Intergenic 5b 53946 CEU:0.953;0.908, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943634 chr2 227068080 Intergenic 6 37841 CEU:1.0;0.825, CHB:0.85;0.505, JPT:1.0;0.731 FUNCTIONAL_SNP rs2972144 chr2 227101411 Intergenic 6 4510 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs925735 chr2 227179630 Intergenic 6 73709 CEU:0.957;0.915, CHB:0.875;0.766, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713540 chr2 227140486 Intergenic 6 34565 CEU:0.957;0.915, CHB:0.875;0.766, JPT:1.0;1.0 FUNCTIONAL_SNP rs1399627 chr2 227083411 Intergenic 6 22510 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713549 chr2 227157209 Intergenic 6 51288 CEU:0.957;0.915, CHB:0.875;0.766, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713557 chr2 227171603 Intergenic 6 65682 CEU:0.957;0.915, CHB:0.875;0.766, JPT:1.0;1.0 FUNCTIONAL_SNP rs1515104 chr2 227092405 Intergenic 6 13516 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs1515110 chr2 227122216 Intergenic 6 16295 CEU:0.953;0.908, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2673131 chr2 227141248 Intergenic 7 35327 CEU:0.955;0.872, CHB:0.861;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943640 chr2 227093585 Intergenic 7 12336 CEU:1.0;0.955, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943641 chr2 227093745 Intergenic 7 12176 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2972143 chr2 227116365 Intergenic 7 10444 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943652 chr2 227108446 Intergenic 7 2525 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943653 chr2 227047771 Intron 7 58150 CEU:1.0;0.825, JPT:1.0;0.73 FUNCTIONAL_SNP rs2176040 chr2 227092802 Intergenic 7 13119 CEU:1.0;1.0, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs908252 chr2 227180619 Intergenic 7 74698 CEU:0.953;0.908, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943660 chr2 227128543 Intergenic 7 22622 CEU:0.955;0.912, CHB:0.86;0.739, JPT:1.0;1.0 FUNCTIONAL_SNP rs2138157 chr2 227103717 Intergenic 7 2204 CEU:0.953;0.908, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713539 chr2 227137125 Intergenic 7 31204 CEU:0.952;0.865, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713541 chr2 227141768 Intergenic 7 35847 CEU:0.953;0.908, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713552 chr2 227181683 Intergenic 7 75762 CEU:0.952;0.865, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2713559 chr2 227164504 Intergenic 7 58583 CEU:0.957;0.915, CHB:0.875;0.766, JPT:1.0;1.0 FUNCTIONAL_SNP rs1515099 chr2 227128899 Intergenic 7 22978 CEU:0.953;0.908, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs1515100 chr2 227128917 Intergenic 7 22996 CEU:0.953;0.907, CHB:0.86;0.739, JPT:1.0;1.0 FUNCTIONAL_SNP rs1515108 chr2 227123086 Intergenic 7 17165 CEU:0.953;0.908, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2972136 chr2 227107035 Intergenic 7 1114 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2673134 chr2 227145757 Intergenic 7 39836 CEU:0.956;0.875, CHB:0.875;0.765, JPT:1.0;1.0 FUNCTIONAL_SNP rs2972146 chr2 227100698 Intergenic 7 5223 CEU:1.0;0.955, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2972147 chr2 227099854 Intergenic 7 6067 CEU:1.0;0.955, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2673141 chr2 227159177 Intergenic 7 53256 CEU:0.957;0.915, CHB:0.875;0.766, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943657 chr2 227123439 Intergenic 7 17518 CEU:0.953;0.908, CHB:0.86;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs2943658 chr2 227123584 Intergenic 7 17663 CEU:1.0;0.952, CHB:0.875;0.766, JPT:1.0;1.0 LEAD_SNP rs7558386 chr2 227562139 Intergenic 7 ASSOCIATION 20932310 P-tau181p 7.0 KIAA1486 - IRS1 LEAD_SNP rs3820928 chr2 227773466 Intron 5b ASSOCIATION 17903307 Pulmonary function traits (other) 5.30102999566 RHBDD1 FUNCTIONAL_SNP rs1429267 chr2 227767593 Intron 3a 5873 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs4675116 chr2 227769607 Intron 4 3859 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4675119 chr2 227774635 Intron 4 1169 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.8, YRI:1.0;0.802 FUNCTIONAL_SNP rs7561378 chr2 227772248 Intron 5b 1218 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10204368 chr2 227774244 Intron 5b 778 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.911 FUNCTIONAL_SNP rs16822905 chr2 227770727 Intron 5b 2739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2396432 chr2 227765891 Intron 5b 7575 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs6752707 chr2 227766822 Intron 5b 6644 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1835159 chr2 227764057 Intron 6 9409 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs11686072 chr2 227777493 Intron 6 4027 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.8, YRI:1.0;1.0 FUNCTIONAL_SNP rs2396431 chr2 227765488 Intron 6 7978 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1346618 chr2 227771988 Intron 6 1478 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1835158 chr2 227763993 Intron 6 9473 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7591163 chr2 228715375 Intergenic 7 ASSOCIATION 17903302 Blood pressure 6.52287874528 CCL20 - TDGF2 FUNCTIONAL_SNP rs7423358 chr2 228704721 Intergenic 4 10654 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.955 FUNCTIONAL_SNP rs4487084 chr2 228713179 Intergenic 5b 2196 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7574255 chr2 228699884 Intergenic 5b 15491 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.959 FUNCTIONAL_SNP rs2056566 chr2 228713241 Intergenic 5b 2134 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2135481 chr2 228706657 Intergenic 6 8718 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.959 LEAD_SNP rs6436839 chr2 229969798 Intron 4 ASSOCIATION 21107309 Reasoning 5.52287874528 PID1 LEAD_SNP rs13397985 chr2 231091223 Intron 4 ASSOCIATION 18758461 Chronic lymphocytic leukemia 9.22184874962 SP140 LEAD_SNP rs7423615 chr2 231116874 Intron 7 ASSOCIATION 21102463 Crohn's disease 12.5228787453 SP140 FUNCTIONAL_SNP rs28445040 chr2 231110582 Coding 7 6292 CEU:1.0;1.0, YRI:1.0;0.704 FUNCTIONAL_SNP rs890581 chr2 231131387 Intron 2b 14513 CEU:1.0;0.894, YRI:1.0;1.0 FUNCTIONAL_SNP rs7563433 chr2 231095678 Intron 3a 21196 CEU:1.0;1.0, YRI:0.886;0.641 FUNCTIONAL_SNP rs13397985 chr2 231091223 Intron 4 25651 CEU:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs10209615 chr2 231089943 Intron 5a 26931 CEU:1.0;0.832 FUNCTIONAL_SNP rs13384787 chr2 231088084 Intron 5b 28790 CEU:1.0;0.887 FUNCTIONAL_SNP rs6743984 chr2 231109329 Intron 6 7545 CEU:1.0;0.945 FUNCTIONAL_SNP rs10202244 chr2 231106935 Intron 7 9939 CEU:1.0;0.887 FUNCTIONAL_SNP rs9989899 chr2 231114131 Intron 7 2743 CEU:1.0;1.0, YRI:1.0;0.608 FUNCTIONAL_SNP rs10201872 chr2 231106724 Intron 7 10150 CEU:1.0;0.887 FUNCTIONAL_SNP rs6436922 chr2 231098040 Intron 7 18834 CEU:1.0;0.945 FUNCTIONAL_SNP rs13385151 chr2 231115976 Intron 7 898 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10198539 chr2 231105646 Intron 7 11228 CEU:1.0;0.877 FUNCTIONAL_SNP rs10498246 chr2 231116417 Intron 7 457 CEU:1.0;1.0 FUNCTIONAL_SNP rs9989835 chr2 231115630 Intron 7 1244 CEU:1.0;1.0, YRI:1.0;0.89 FUNCTIONAL_SNP rs6716753 chr2 231097129 Intron 7 19745 CEU:1.0;0.945 FUNCTIONAL_SNP rs9989746 chr2 231115790 Intron 7 1084 CEU:1.0;0.887 LEAD_SNP rs17275498 chr2 231420401 Intron 7 ASSOCIATION 20125193 Cognitive test performance 5.09691001301 HMGB1L3 - CAB39 LEAD_SNP rs749052 chr2 232796610 Intergenic 7 ASSOCIATION 18391951 Height 6.0 NPPC - DIS3L2 LEAD_SNP rs2580816 chr2 232797966 Intergenic 4 ASSOCIATION 20881960 Height 21.2218487496 NPPC - DIS3L2 LEAD_SNP rs7571816 chr2 233077064 Intron 2b ASSOCIATION 20189936 Height 8.04575749056 DIS3L2 FUNCTIONAL_SNP rs6728302 chr2 233053961 Intron 7 23103 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.907, YRI:1.0;1.0 LEAD_SNP rs6717918 chr2 233155110 Intron 7 ASSOCIATION 19570815 Height 8.52287874528 DIS3L2 FUNCTIONAL_SNP rs6743962 chr2 233181344 Intron 2b 26234 CEU:0.945;0.892, CHB:0.945;0.684, JPT:1.0;0.908 FUNCTIONAL_SNP rs871411 chr2 233180919 Intron 3a 25809 CEU:0.945;0.892, CHB:0.945;0.684, JPT:1.0;0.905 FUNCTIONAL_SNP rs6718438 chr2 233155566 Intron 5b 456 CEU:0.938;0.88, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13020779 chr2 233149600 Intron 5b 5510 CEU:0.935;0.821, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs6746834 chr2 233158817 Intron 6 3707 CEU:0.935;0.821, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11901692 chr2 233149739 Intron 6 5371 CEU:0.935;0.821, CHB:1.0;0.953, JPT:1.0;1.0 LEAD_SNP rs1656402 chr2 233426526 Intron 6 ASSOCIATION 21079520 Non-small cell lung cancer 7.09691001301 EIF4E2 FUNCTIONAL_SNP rs1656399 chr2 233427803 Intron 4 1277 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1729252 chr2 233428582 Intron 4 2056 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1656398 chr2 233427852 Intron 5a 1326 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1071997 chr2 233425541 Intron 5a 985 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6749955 chr2 233437917 Intron 5b 11391 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1550097 chr2 233428275 Intron 5b 1749 CEU:1.0;0.946, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1190454 chr2 233435325 Intron 5b 8799 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1729253 chr2 233428740 Intron 5b 2214 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3111399 chr2 233429810 Intron 5b 3284 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1190439 chr2 233422390 Intron 6 4136 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1190442 chr2 233422205 Intron 7 4321 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1190455 chr2 233435153 Intron 7 8627 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2077929 chr2 233425738 Intron 7 788 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10933436 chr2 233998481 Intron 7 ASSOCIATION 21378990 Coronary heart disease 5.15490195999 INPP5D - ATG16L1 FUNCTIONAL_SNP rs9288685 chr2 233987114 Intron 5b 11367 CEU:0.954;0.801 FUNCTIONAL_SNP rs10933434 chr2 233998108 Intron 6 373 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10933435 chr2 233998146 Intron 6 335 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11693862 chr2 233999081 Intron 7 600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11682728 chr2 233999253 Intron 7 772 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs10933433 chr2 233997982 Intron 7 499 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10210302 chr2 234158839 Intergenic 5b ASSOCIATION 17554300 Crohn's disease 13.3010299957 ATG16L1 FUNCTIONAL_SNP rs2241880 chr2 234183368 Coding 7 24529 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs6431654 chr2 234161769 Intron 4 2930 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs3792112 chr2 234176609 Intron 4 17770 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs12994997 chr2 234173503 Intron 5b 14664 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs2289474 chr2 234181848 Intron 5b 23009 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.911;0.83 FUNCTIONAL_SNP rs6752107 chr2 234161448 Intron 5b 2609 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs3792108 chr2 234184952 Intron 6 26113 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs2241878 chr2 234183718 Intron 6 24879 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.913 FUNCTIONAL_SNP rs12162308 chr2 234172188 Intron 7 13349 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs6708373 chr2 234172846 Intron 7 14007 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.913 FUNCTIONAL_SNP rs10165561 chr2 234172915 Intron 7 14076 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.902 FUNCTIONAL_SNP rs2289472 chr2 234182240 Intron 7 23401 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs2241879 chr2 234183468 Intron 7 24629 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs13391356 chr2 234170369 Intron 7 11530 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 LEAD_SNP rs3828309 chr2 234180410 Intron 4 ASSOCIATION 18587394 Crohn's disease 31.6989700043 ATG16L1 FUNCTIONAL_SNP rs1045100 chr2 234203597 Exon,non-coding 7 23187 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs3792109 chr2 234184417 Exon,non-coding 7 4007 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10192702 chr2 234206750 Intergenic 4 26340 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.946;0.849 FUNCTIONAL_SNP rs3792111 chr2 234179690 Intron 5a 720 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs13411660 chr2 234208258 Intergenic 5b 27848 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.901 FUNCTIONAL_SNP rs7559194 chr2 234206799 Intergenic 6 26389 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.946;0.849 FUNCTIONAL_SNP rs12994971 chr2 234178453 Intron 6 1957 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6431660 chr2 234167234 Intron 6 13176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.943;0.843 FUNCTIONAL_SNP rs13009506 chr2 234175706 Intron 7 4704 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2241880 chr2 234183368 Coding 7 ASSOCIATION 20570966 Crohn's disease 5.52287874528 ATG16L1 ASSOCIATION 17435756 Crohn's disease 13.0 ATG16L1 FUNCTIONAL_SNP rs1045100 chr2 234203597 Exon,non-coding 7 20229 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.705 FUNCTIONAL_SNP rs3792109 chr2 234184417 Exon,non-coding 7 1049 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.75 FUNCTIONAL_SNP rs10187822 chr2 234206474 Intergenic 2b 23106 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10192702 chr2 234206750 Intergenic 4 23382 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.94;0.629 FUNCTIONAL_SNP rs10929322 chr2 234149702 Intergenic 4 33666 CEU:1.0;0.886, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs11679791 chr2 234156536 Intergenic 4 26832 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6431654 chr2 234161769 Intron 4 21599 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs3792112 chr2 234176609 Intron 4 6759 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3828309 chr2 234180410 Intron 4 2958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.75 FUNCTIONAL_SNP rs3792111 chr2 234179690 Intron 5a 3678 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.674 FUNCTIONAL_SNP rs10195395 chr2 234206504 Intergenic 5b 23136 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12994997 chr2 234173503 Intron 5b 9865 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2289474 chr2 234181848 Intron 5b 1520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs13411660 chr2 234208258 Intergenic 5b 24890 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.89;0.652 FUNCTIONAL_SNP rs2880080 chr2 234154139 Intergenic 5b 29229 CEU:1.0;0.961 FUNCTIONAL_SNP rs6752107 chr2 234161448 Intron 5b 21920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs10210302 chr2 234158839 Intergenic 5b 24529 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.871 FUNCTIONAL_SNP rs3792108 chr2 234184952 Intron 6 1584 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7559194 chr2 234206799 Intergenic 6 23431 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.94;0.629 FUNCTIONAL_SNP rs12994971 chr2 234178453 Intron 6 4915 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.734 FUNCTIONAL_SNP rs6431660 chr2 234167234 Intron 6 16134 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.938;0.617 FUNCTIONAL_SNP rs2241878 chr2 234183718 Intron 6 350 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs12162308 chr2 234172188 Intron 7 11180 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs13009506 chr2 234175706 Intron 7 7662 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.75 FUNCTIONAL_SNP rs6708373 chr2 234172846 Intron 7 10522 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs10165561 chr2 234172915 Intron 7 10453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.903 FUNCTIONAL_SNP rs2289472 chr2 234182240 Intron 7 1128 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2241879 chr2 234183468 Intron 7 100 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1596017 chr2 234147930 Intergenic 7 35438 CEU:1.0;0.886, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs13391356 chr2 234170369 Intron 7 12999 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 LEAD_SNP rs3792109 chr2 234184417 Exon,non-coding 7 ASSOCIATION 21102463 Crohn's disease 40.15490196 ATG16L1 FUNCTIONAL_SNP rs2241880 chr2 234183368 Coding 7 1049 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.75 FUNCTIONAL_SNP rs1045100 chr2 234203597 Exon,non-coding 7 19180 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs10187822 chr2 234206474 Intergenic 2b 22057 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10192702 chr2 234206750 Intergenic 4 22333 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.946;0.849 FUNCTIONAL_SNP rs10929322 chr2 234149702 Intergenic 4 34715 CEU:0.958;0.848, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs11679791 chr2 234156536 Intergenic 4 27881 CEU:0.958;0.848, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6431654 chr2 234161769 Intron 4 22648 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.686 FUNCTIONAL_SNP rs3792112 chr2 234176609 Intron 4 7808 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.75 FUNCTIONAL_SNP rs3828309 chr2 234180410 Intron 4 4007 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3792111 chr2 234179690 Intron 5a 4727 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs10195395 chr2 234206504 Intergenic 5b 22087 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12994997 chr2 234173503 Intron 5b 10914 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.75 FUNCTIONAL_SNP rs2289474 chr2 234181848 Intron 5b 2569 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.717 FUNCTIONAL_SNP rs13411660 chr2 234208258 Intergenic 5b 23841 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.901 FUNCTIONAL_SNP rs2880080 chr2 234154139 Intergenic 5b 30278 CEU:0.96;0.922 FUNCTIONAL_SNP rs6752107 chr2 234161448 Intron 5b 22969 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.686 FUNCTIONAL_SNP rs10210302 chr2 234158839 Intergenic 5b 25578 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.942;0.636 FUNCTIONAL_SNP rs3792108 chr2 234184952 Intron 6 535 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.75 FUNCTIONAL_SNP rs7559194 chr2 234206799 Intergenic 6 22382 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.946;0.849 FUNCTIONAL_SNP rs12994971 chr2 234178453 Intron 6 5964 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6431660 chr2 234167234 Intron 6 17183 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.943;0.843 FUNCTIONAL_SNP rs2241878 chr2 234183718 Intron 6 699 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.717 FUNCTIONAL_SNP rs12162308 chr2 234172188 Intron 7 12229 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.686 FUNCTIONAL_SNP rs13009506 chr2 234175706 Intron 7 8711 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6708373 chr2 234172846 Intron 7 11571 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.717 FUNCTIONAL_SNP rs10165561 chr2 234172915 Intron 7 11502 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.641 FUNCTIONAL_SNP rs2289472 chr2 234182240 Intron 7 2177 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.75 FUNCTIONAL_SNP rs2241879 chr2 234183468 Intron 7 949 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.75 FUNCTIONAL_SNP rs3792106 chr2 234190740 Intron 7 6323 CEU:1.0;0.818, CHB:1.0;0.952, JPT:1.0;0.6 FUNCTIONAL_SNP rs1596017 chr2 234147930 Intergenic 7 36487 CEU:0.958;0.848, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs13391356 chr2 234170369 Intron 7 14048 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.686 LEAD_SNP rs838705 chr2 234273242 Intron 5a ASSOCIATION 20705733 Serum calcium 5.04575749056 DGKD LEAD_SNP rs6704644 chr2 234406655 Intron 7 ASSOCIATION 21646302 Bilirubin levels 7.09691001301 USP40 FUNCTIONAL_SNP rs1046976 chr2 234255548 Coding 7 151107 CEU:1.0;0.838, CHB:1.0;1.0 FUNCTIONAL_SNP rs10929178 chr2 234396566 Intron 4 10089 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs11686188 chr2 234451630 Intron 5b 44975 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3820744 chr2 234361548 Intron 5b 45107 CEU:0.917;0.841, CHB:1.0;1.0, JPT:0.857;0.644 FUNCTIONAL_SNP rs3796090 chr2 234390602 Intron 5b 16053 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs3754595 chr2 234370425 Intron 5b 36230 CEU:0.917;0.841, CHB:1.0;1.0, JPT:0.857;0.644 FUNCTIONAL_SNP rs11675254 chr2 234364047 Intron 5b 42608 CEU:0.917;0.841, CHB:1.0;1.0, JPT:0.857;0.644 FUNCTIONAL_SNP rs3796092 chr2 234390469 Intron 5b 16186 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs7587876 chr2 234316032 Intron 6 90623 CEU:0.917;0.841, CHB:1.0;1.0 FUNCTIONAL_SNP rs11675858 chr2 234440053 Intron 6 33398 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs6753242 chr2 234329419 Intron 6 77236 CEU:0.917;0.841, CHB:1.0;1.0 FUNCTIONAL_SNP rs6746234 chr2 234433081 Intron 7 26426 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs13394720 chr2 234502121 Intergenic 4 ASSOCIATION 20041166 HIV-1 control 6.30102999566 UGT1A12P - UGT1A11P FUNCTIONAL_SNP rs1042590 chr2 234526785 Coding 7 24664 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs17868296 chr2 234497246 Intergenic 5a 4875 CEU:1.0;1.0 FUNCTIONAL_SNP rs4132954 chr2 234493876 Intergenic 6 8245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs6757739 chr2 234498128 Intergenic 6 3993 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs4129945 chr2 234493048 Intergenic 7 9073 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13394291 chr2 234501740 Intergenic 7 381 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs17868297 chr2 234498651 Intergenic 7 3470 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.922;0.613 FUNCTIONAL_SNP rs13430633 chr2 234494513 Intergenic 7 7608 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.669 LEAD_SNP rs11892031 chr2 234565283 Intron 3a ASSOCIATION 20972438 Bladder cancer 7.0 UGT1A10;UGT1A8 FUNCTIONAL_SNP rs11893247 chr2 234565254 Intron 4 29 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4402757 chr2 234516455 Intergenic 7 48828 CEU:1.0;1.0 LEAD_SNP rs2602381 chr2 234584324 Intron 7 ASSOCIATION 20732626 Attention deficit hyperactivity disorder 5.39794000867 UGT1A10;UGT1A8;UGT1A9 LEAD_SNP rs887829 chr2 234668570 Intron 7 ASSOCIATION 19419973 Bilirubin levels 69.0 UGT1A10;UGT1A8;UGT1A7;UGT1A6;UGT1A5;UGT1A9;UGT1A4;UGT1A1;UGT1A3 FUNCTIONAL_SNP rs6742078 chr2 234672639 Intron 5b 4069 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs4148325 chr2 234673309 Intron 5b 4739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6742078 chr2 234672639 Intron 5b ASSOCIATION 19414484 Serum bilirubin levels 324.698970004 UGT1A10;UGT1A8;UGT1A7;UGT1A6;UGT1A5;UGT1A9;UGT1A4;UGT1A1;UGT1A3 FUNCTIONAL_SNP rs4148324 chr2 234672722 Intron 5b 83 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs4148325 chr2 234673309 Intron 5b 670 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs887829 chr2 234668570 Intron 7 4069 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 LEAD_SNP rs4148325 chr2 234673309 Intron 5b ASSOCIATION 21646302 Bilirubin levels 61.3010299957 UGT1A10;UGT1A8;UGT1A7;UGT1A6;UGT1A5;UGT1A9;UGT1A4;UGT1A1;UGT1A3 FUNCTIONAL_SNP rs2070959 chr2 234602191 Coding 5b 71118 CEU:1.0;0.951 FUNCTIONAL_SNP rs6714634 chr2 234664765 Exon,non-coding 5b 8544 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10929302 chr2 234665782 Intron 2b 7527 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17863787 chr2 234611094 Intron 4 62215 CEU:1.0;0.951, JPT:1.0;0.601 FUNCTIONAL_SNP rs11695484 chr2 234654449 Intron 4 18860 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17864701 chr2 234652717 Intron 4 20592 CEU:1.0;0.888 FUNCTIONAL_SNP rs6722076 chr2 234647317 Intron 5a 25992 CEU:1.0;0.95, CHB:1.0;0.73, JPT:1.0;0.864 FUNCTIONAL_SNP rs10168416 chr2 234597087 Intron 5a 76222 CEU:1.0;0.904 FUNCTIONAL_SNP rs10173355 chr2 234597321 Intron 5a 75988 CEU:1.0;0.904 FUNCTIONAL_SNP rs6742078 chr2 234672639 Intron 5b 670 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs4148324 chr2 234672722 Intron 5b 587 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.883;0.725 FUNCTIONAL_SNP rs17862875 chr2 234649302 Intron 5b 24007 CEU:1.0;0.904, CHB:1.0;0.731, JPT:1.0;0.864 FUNCTIONAL_SNP rs2741046 chr2 234580249 Intron 6 93060 CEU:1.0;0.813 FUNCTIONAL_SNP rs28899170 chr2 234604230 Intron 6 69079 CEU:1.0;0.904 FUNCTIONAL_SNP rs2602376 chr2 234582051 Intron 6 91258 CEU:1.0;0.813 FUNCTIONAL_SNP rs887829 chr2 234668570 Intron 7 4739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6744284 chr2 234625297 Intron 7 48012 CEU:1.0;0.858, CHB:1.0;0.602, JPT:1.0;0.864 FUNCTIONAL_SNP rs10202865 chr2 234587707 Intron 7 85602 CEU:1.0;0.904 FUNCTIONAL_SNP rs2741044 chr2 234579368 Intron 7 93941 CEU:1.0;0.808 FUNCTIONAL_SNP rs2741045 chr2 234580140 Intron 7 93169 CEU:1.0;0.813 LEAD_SNP rs2361502 chr2 234698790 Intron 6 ASSOCIATION 21646302 Bilirubin levels 22.15490196 HEATR7B1 FUNCTIONAL_SNP rs12986677 chr2 234698976 Intron 6 186 CEU:1.0;0.946, CHB:1.0;1.0, YRI:1.0;0.674 LEAD_SNP rs579327 chr2 234768067 Intergenic 6 ASSOCIATION 20595579 Longevity 7.15490195999 HJURP - MSL3L2 FUNCTIONAL_SNP rs529963 chr2 234758500 Coding 5b 9567 CEU:1.0;1.0 FUNCTIONAL_SNP rs686802 chr2 234766113 Intergenic 4 1954 CEU:1.0;1.0, CHB:1.0;0.779, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs506632 chr2 234763500 Intergenic 4 4567 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs502321 chr2 234766744 Intergenic 4 1323 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs473504 chr2 234762272 Intron 4 5795 CEU:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs686007 chr2 234766253 Intergenic 4 1814 CEU:1.0;1.0 FUNCTIONAL_SNP rs672831 chr2 234766883 Intergenic 5a 1184 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs581377 chr2 234767789 Intergenic 5b 278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs658054 chr2 234767934 Intergenic 5b 133 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs522389 chr2 234760089 Intron 5b 7978 CEU:1.0;1.0 FUNCTIONAL_SNP rs658607 chr2 234767759 Intergenic 5b 308 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs536265 chr2 234757847 Intron 5b 10220 CEU:1.0;1.0 FUNCTIONAL_SNP rs606397 chr2 234758013 Intron 5b 10054 CEU:1.0;1.0 FUNCTIONAL_SNP rs577734 chr2 234768230 Intergenic 5b 163 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs577782 chr2 234768206 Intergenic 5b 139 CEU:1.0;1.0 FUNCTIONAL_SNP rs575194 chr2 234768475 Intergenic 5b 408 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs693637 chr2 234758614 Intron 5b 9453 CEU:1.0;1.0 FUNCTIONAL_SNP rs13417465 chr2 234759947 Intron 5b 8120 CEU:1.0;1.0 FUNCTIONAL_SNP rs498786 chr2 234770721 Intergenic 6 2654 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs498790 chr2 234770722 Intergenic 6 2655 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10173569 chr2 234758767 Intron 6 9300 CEU:1.0;1.0 FUNCTIONAL_SNP rs598759 chr2 234770554 Intergenic 6 2487 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs598760 chr2 234770553 Intergenic 6 2486 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs611563 chr2 234770023 Intergenic 6 1956 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17862907 chr2 234768983 Intergenic 6 916 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs577820 chr2 234769621 Intergenic 6 1554 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs611131 chr2 234770117 Intergenic 6 2050 CEU:1.0;0.905, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs619351 chr2 234757450 Intron 6 10617 CEU:1.0;1.0 FUNCTIONAL_SNP rs611169 chr2 234770090 Intergenic 6 2023 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs628138 chr2 234768647 Intergenic 6 580 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741, YRI:1.0;1.0 FUNCTIONAL_SNP rs17864729 chr2 234768821 Intergenic 6 754 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs498696 chr2 234770688 Intergenic 7 2621 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11562979 chr2 234768785 Intergenic 7 718 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2650888 chr2 234767398 Intergenic 7 669 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs213556 chr2 234753407 Intron 7 14660 CEU:1.0;1.0, CHB:1.0;0.602, YRI:1.0;1.0 FUNCTIONAL_SNP rs11563228 chr2 234769108 Intergenic 7 1041 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11563231 chr2 234759810 Intron 7 8257 CEU:1.0;1.0 FUNCTIONAL_SNP rs13406453 chr2 234765972 Intergenic 7 2095 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs657658 chr2 234768003 Intergenic 7 64 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs566529 chr2 234756811 Intron 7 11256 CEU:1.0;0.927, YRI:1.0;0.532 FUNCTIONAL_SNP rs2173746 chr2 234768730 Intergenic 7 663 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2173747 chr2 234768694 Intergenic 7 627 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13384575 chr2 234759743 Intron 7 8324 CEU:1.0;1.0 FUNCTIONAL_SNP rs501650 chr2 234771043 Intergenic 7 2976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13384669 chr2 234759800 Intron 7 8267 CEU:1.0;1.0 FUNCTIONAL_SNP rs2530796 chr2 234769266 Intergenic 7 1199 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs499703 chr2 234766994 Intergenic 7 1073 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs498680 chr2 234767128 Intergenic 7 939 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs625151 chr2 234769305 Intergenic 7 1238 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10166942 chr2 234825093 Intergenic 6 ASSOCIATION 21666692 Migraine 11.2218487496 TRPM8 FUNCTIONAL_SNP rs11563063 chr2 234821530 Intergenic 2b 3563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs6711120 chr2 234845134 Intron 5a 20041 CEU:1.0;1.0, CHB:0.94;0.835, JPT:0.897;0.767, YRI:1.0;1.0 FUNCTIONAL_SNP rs758275 chr2 234838020 Intron 5b 12927 CEU:1.0;1.0, CHB:0.942;0.887, JPT:0.897;0.767, YRI:1.0;1.0 FUNCTIONAL_SNP rs6724624 chr2 234820578 Intergenic 5b 4515 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs1003540 chr2 234825884 Intergenic 5b 791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10170399 chr2 234826648 Intron 5b 1555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9646720 chr2 234847573 Intron 5b 22480 CEU:1.0;0.842 FUNCTIONAL_SNP rs10490012 chr2 234843494 Intron 5b 18401 CEU:1.0;1.0 FUNCTIONAL_SNP rs2302153 chr2 234847823 Intron 5b 22730 CEU:1.0;0.893 FUNCTIONAL_SNP rs10189040 chr2 234843191 Intron 5b 18098 CEU:1.0;1.0, CHB:0.942;0.887, JPT:0.892;0.756, YRI:1.0;1.0 FUNCTIONAL_SNP rs11892538 chr2 234821445 Intergenic 5b 3648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs6431648 chr2 234833457 Intron 5b 8364 CEU:1.0;1.0, CHB:1.0;0.943, JPT:0.897;0.767, YRI:1.0;1.0 FUNCTIONAL_SNP rs758276 chr2 234837808 Intron 6 12715 CEU:1.0;1.0, CHB:0.942;0.887, JPT:0.897;0.767, YRI:1.0;1.0 FUNCTIONAL_SNP rs1965629 chr2 234824731 Intergenic 6 362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13418652 chr2 234845580 Intron 6 20487 CEU:1.0;1.0 FUNCTIONAL_SNP rs6738979 chr2 234823058 Intergenic 7 2035 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4663983 chr2 234815005 Intergenic 7 10088 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs4663986 chr2 234834455 Intron 7 9362 CEU:1.0;1.0, CHB:1.0;0.943, JPT:0.897;0.767, YRI:1.0;1.0 FUNCTIONAL_SNP rs7604471 chr2 234834176 Intron 7 9083 CEU:1.0;1.0, CHB:1.0;0.943, JPT:0.897;0.767, YRI:1.0;1.0 FUNCTIONAL_SNP rs737636 chr2 234832824 Intron 7 7731 CEU:1.0;1.0, CHB:1.0;0.943, JPT:0.947;0.814, YRI:1.0;1.0 FUNCTIONAL_SNP rs10187654 chr2 234814059 Intergenic 7 11034 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs4233636 chr2 234834402 Intron 7 9309 CEU:1.0;1.0, CHB:1.0;0.943, JPT:0.897;0.767, YRI:1.0;1.0 FUNCTIONAL_SNP rs2362290 chr2 234825369 Intergenic 7 276 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12151790 chr2 235210727 Intergenic 5b ASSOCIATION 20548944 Osteoporosis 6.30102999566 SPP2 - RPS20P12 LEAD_SNP rs6736997 chr2 235615197 Intergenic 7 ASSOCIATION 20686608 Pancreatic cancer 5.22184874962 ARL4C - SH3BP4 LEAD_SNP rs2042831 chr2 235857114 Intergenic 7 ASSOCIATION 20595579 Longevity 6.15490195999 ARL4C - SH3BP4 FUNCTIONAL_SNP rs10200746 chr2 235849911 Intergenic 5a 7203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.849 FUNCTIONAL_SNP rs4663525 chr2 235853314 Intergenic 7 3800 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95 FUNCTIONAL_SNP rs4663526 chr2 235855434 Intergenic 7 1680 CEU:1.0;1.0, YRI:0.737;0.543 FUNCTIONAL_SNP rs2042830 chr2 235857046 Intergenic 7 68 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.736 LEAD_SNP rs11676855 chr2 235900171 Intron 5b ASSOCIATION 21546767 Dialysis-related mortality 5.04575749056 SH3BP4 LEAD_SNP rs13390159 chr2 237156549 Intron 7 ASSOCIATION 20339536 Response to statin therapy 6.69897000434 ASB18 FUNCTIONAL_SNP rs1377450 chr2 237155674 Intron 5b 875 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1377451 chr2 237155599 Intron 5b 950 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7598462 chr2 237158333 Intron 5b 1784 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7598601 chr2 237158685 Intron 7 2136 CEU:1.0;1.0 FUNCTIONAL_SNP rs13416480 chr2 237156676 Intron 7 127 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1377449 chr2 237155847 Intron 7 702 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11904841 chr2 237157540 Intron 7 991 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.763 LEAD_SNP rs2292884 chr2 238443226 Coding 4 ASSOCIATION 21743057 Prostate cancer 7.39794000867 MLPH FUNCTIONAL_SNP rs6760842 chr2 238398165 Intron 2b 45061 CEU:0.947;0.897, JPT:0.919;0.686 FUNCTIONAL_SNP rs880932 chr2 238396963 Intron 3a 46263 CEU:0.946;0.849, JPT:0.822;0.509 FUNCTIONAL_SNP rs6713555 chr2 238398182 Intron 4 45044 CEU:0.946;0.849, JPT:0.847;0.625 FUNCTIONAL_SNP rs7606177 chr2 238394913 Intergenic 4 48313 CEU:0.946;0.849 FUNCTIONAL_SNP rs11896232 chr2 238438124 Intron 4 5102 CEU:1.0;1.0, CHB:0.935;0.822, JPT:0.928;0.805 FUNCTIONAL_SNP rs13425580 chr2 238447168 Intron 4 3942 CEU:1.0;0.949, CHB:1.0;0.835, JPT:1.0;0.815 FUNCTIONAL_SNP rs7586312 chr2 238439389 Intron 5b 3837 CEU:1.0;1.0, CHB:0.94;0.793, JPT:0.932;0.87 FUNCTIONAL_SNP rs13418586 chr2 238445593 Intron 5b 2367 CEU:1.0;0.949, CHB:1.0;0.731, JPT:1.0;0.697 FUNCTIONAL_SNP rs13432426 chr2 238388631 Intergenic 5b 54595 CEU:0.947;0.897, JPT:0.823;0.511 FUNCTIONAL_SNP rs2292885 chr2 238443407 Intron 5b 181 CEU:1.0;0.949, CHB:1.0;0.785, JPT:1.0;0.722 FUNCTIONAL_SNP rs6724766 chr2 238413600 Intron 5b 29626 CEU:0.944;0.845, CHB:0.823;0.642, JPT:0.866;0.749 FUNCTIONAL_SNP rs7569197 chr2 238383073 Intergenic 5b 60153 CEU:0.947;0.897, JPT:0.906;0.571 FUNCTIONAL_SNP rs13429533 chr2 238448712 Intron 5b 5486 CEU:0.946;0.849, CHB:1.0;0.663, JPT:1.0;0.66 FUNCTIONAL_SNP rs6431544 chr2 238417728 Intron 5b 25498 CEU:0.947;0.897, CHB:0.829;0.686, JPT:0.857;0.687 FUNCTIONAL_SNP rs1463795 chr2 238412392 Intron 5b 30834 CEU:0.944;0.845, CHB:0.818;0.6, JPT:0.866;0.749 FUNCTIONAL_SNP rs12471291 chr2 238441751 Intron 5b 1475 CEU:1.0;1.0, CHB:0.938;0.746, JPT:0.932;0.87 FUNCTIONAL_SNP rs6757376 chr2 238400036 Intron 6 43190 CEU:0.946;0.849, JPT:0.847;0.625 FUNCTIONAL_SNP rs7584330 chr2 238387228 Intergenic 7 55998 CEU:0.947;0.897, JPT:0.823;0.511 FUNCTIONAL_SNP rs11891348 chr2 238440449 Intron 7 2777 CEU:1.0;1.0, CHB:0.929;0.759, JPT:0.922;0.79 FUNCTIONAL_SNP rs12465081 chr2 238401784 Intron 7 41442 CEU:0.946;0.849, JPT:0.847;0.625 LEAD_SNP rs6743931 chr2 240418660 Intergenic 4 ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 5.69897000434 MGC16025 - FLJ45964 LEAD_SNP rs1574192 chr2 241308505 Intergenic 4 ASSOCIATION 19023125 Brain imaging in schizophrenia (interaction) 5.39794000867 OTOS - GPC1 LEAD_SNP rs2953145 chr2 241515596 Intron 7 ASSOCIATION 17554300 Bipolar disorder 5.15490195999 RNPEPL1 FUNCTIONAL_SNP rs2953146 chr2 241515252 Intron 5b 344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 LEAD_SNP rs4676406 chr2 241579108 Intergenic 5b ASSOCIATION 21297633 Ulcerative colitis 10.096910013 GPR35 - AQP12B LEAD_SNP rs757978 chr2 242371101 Coding 6 ASSOCIATION 20062064 Chronic lymphocytic leukemia 8.69897000434 FARP2 FUNCTIONAL_SNP rs41342147 chr2 242407588 Coding 5b 36487 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs2074771 chr2 242350944 Intron 5b 20157 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs11689496 chr2 242426399 Intron 5b 55298 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.905;0.561 FUNCTIONAL_SNP rs7601738 chr2 242375813 Intron 6 4712 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs1468445 chr2 242395554 Intron 6 24453 CEU:1.0;1.0 FUNCTIONAL_SNP rs11681497 chr2 242344333 Intron 7 26768 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12479254 chr2 242502956 Intron 4 ASSOCIATION 20171287 Brain structure 6.22184874962 BOK FUNCTIONAL_SNP rs6718026 chr2 242495392 Intron 2b 7564 CEU:1.0;0.846 FUNCTIONAL_SNP rs12469165 chr2 242503543 Intron 4 587 CEU:0.956;0.875 LEAD_SNP rs10510181 chr3 191047 Intergenic 7 ASSOCIATION 21216876 Scoliosis 6.09691001301 - CHL1 FUNCTIONAL_SNP rs1400182 chr3 170611 Intergenic 5a 20436 CEU:0.952;0.827, CHB:0.947;0.814, JPT:0.875;0.624, YRI:0.918;0.678 FUNCTIONAL_SNP rs9819101 chr3 166507 Intergenic 5a 24540 CEU:0.954;0.833, CHB:0.9;0.811, JPT:0.936;0.679 FUNCTIONAL_SNP rs965084 chr3 167098 Intergenic 5b 23949 CEU:0.957;0.844, CHB:0.943;0.804, JPT:0.938;0.684, YRI:0.803;0.605 FUNCTIONAL_SNP rs2386563 chr3 177755 Intergenic 6 13292 CEU:1.0;0.887 FUNCTIONAL_SNP rs1878169 chr3 165112 Intergenic 6 25935 CEU:0.948;0.817, CHB:0.941;0.761, JPT:0.799;0.601 FUNCTIONAL_SNP rs17038327 chr3 190200 Intergenic 6 847 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;0.778 FUNCTIONAL_SNP rs7639674 chr3 172520 Intergenic 7 18527 CEU:0.958;0.846, CHB:1.0;0.953, JPT:0.948;0.857, YRI:0.933;0.726 FUNCTIONAL_SNP rs4684051 chr3 178525 Intergenic 7 12522 CEU:1.0;0.887, CHB:1.0;1.0, JPT:0.948;0.857, YRI:1.0;0.769 FUNCTIONAL_SNP rs1588962 chr3 184035 Intergenic 7 7012 CEU:1.0;0.959, CHB:1.0;0.953, JPT:1.0;0.946 LEAD_SNP rs6764363 chr3 312349 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 5.22184874962 CHL1 LEAD_SNP rs4684585 chr3 883851 Intergenic 6 ASSOCIATION 20339536 Response to statin therapy 6.04575749056 RPSAP32 - CNTN6 FUNCTIONAL_SNP rs11131128 chr3 898183 Intergenic 3a 14332 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.906 FUNCTIONAL_SNP rs4686247 chr3 892951 Intergenic 4 9100 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.906 FUNCTIONAL_SNP rs2313184 chr3 896682 Intergenic 5b 12831 CEU:1.0;1.0 FUNCTIONAL_SNP rs12639429 chr3 892152 Intergenic 6 8301 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.906 FUNCTIONAL_SNP rs6443189 chr3 914685 Intergenic 6 30834 CEU:1.0;1.0, CHB:1.0;0.952, JPT:0.948;0.856 FUNCTIONAL_SNP rs1916758 chr3 913198 Intergenic 6 29347 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.906, YRI:0.945;0.587 FUNCTIONAL_SNP rs12637032 chr3 908745 Intergenic 6 24894 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.906 FUNCTIONAL_SNP rs1403910 chr3 886304 Intergenic 7 2453 CEU:1.0;0.913, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.688 FUNCTIONAL_SNP rs4686226 chr3 885794 Intergenic 7 1943 CEU:0.91;0.829, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs4686228 chr3 887936 Intergenic 7 4085 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs4686241 chr3 892557 Intergenic 7 8706 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.904 FUNCTIONAL_SNP rs7624486 chr3 894845 Intergenic 7 10994 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.906 FUNCTIONAL_SNP rs2222506 chr3 900367 Intergenic 7 16516 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.906 FUNCTIONAL_SNP rs6803115 chr3 886605 Intergenic 7 2754 CEU:1.0;0.913, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs6776251 chr3 903380 Intergenic 7 19529 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.906, YRI:0.949;0.648 FUNCTIONAL_SNP rs1608524 chr3 894191 Intergenic 7 10340 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.906 FUNCTIONAL_SNP rs7642957 chr3 899962 Intergenic 7 16111 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.906, YRI:1.0;0.962 FUNCTIONAL_SNP rs6805972 chr3 887170 Intergenic 7 3319 CEU:1.0;0.913, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs4686244 chr3 892739 Intergenic 7 8888 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.906 FUNCTIONAL_SNP rs2049372 chr3 885128 Intergenic 7 1277 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7645919 chr3 883209 Intergenic 7 642 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2313185 chr3 893517 Intergenic 7 9666 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.903 FUNCTIONAL_SNP rs12634433 chr3 880584 Intergenic 7 3267 CEU:1.0;1.0, CHB:0.946;0.809, JPT:1.0;1.0 FUNCTIONAL_SNP rs6763381 chr3 891873 Intergenic 7 8022 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.906, YRI:1.0;0.961 FUNCTIONAL_SNP rs6782335 chr3 890269 Intergenic 7 6418 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs35964523 chr3 898661 Intergenic 6 ASSOCIATION 20339536 Response to statin therapy 5.09691001301 RPSAP32 - CNTN6 LEAD_SNP rs10510217 chr3 1839693 Intergenic 7 ASSOCIATION 21116278 Total ventricular volume 5.52287874528 RPL23AP39 - RPL21P17 FUNCTIONAL_SNP rs11720558 chr3 1838036 Intergenic 6 1657 CEU:1.0;1.0 FUNCTIONAL_SNP rs9784319 chr3 1829535 Intergenic 6 10158 CEU:1.0;0.913 FUNCTIONAL_SNP rs11720928 chr3 1816205 Intergenic 7 23488 CEU:1.0;0.912 LEAD_SNP rs2619566 chr3 2624938 Intergenic 7 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 5.15490195999 CNTN4 LEAD_SNP rs4370013 chr3 2654691 Intergenic 6 ASSOCIATION 17903302 Blood pressure 5.39794000867 CNTN4 FUNCTIONAL_SNP rs2600305 chr3 2655555 Intergenic 7 864 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.966 LEAD_SNP rs1601875 chr3 3658840 Intergenic 6 ASSOCIATION 18711365 Bipolar disorder 5.15490195999 CRBN - LRRN1 LEAD_SNP rs794185 chr3 4437358 Intergenic 4 ASSOCIATION 20802204 Multiple sclerosis--Brain Glutamate Levels 6.22184874962 SUMF1 LEAD_SNP rs3749380 chr3 6903297 Intergenic 5b ASSOCIATION 19165232 Panic disorder 5.69897000434 GRM7 LEAD_SNP rs13080594 chr3 7403646 Intergenic 7 ASSOCIATION 21368711 Personality dimensions 6.09691001301 GRM7 FUNCTIONAL_SNP rs7647282 chr3 7412044 Intergenic 6 8398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7653827 chr3 7408172 Intergenic 6 4526 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs1391965 chr3 7412608 Intergenic 6 8962 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7647087 chr3 7411815 Intergenic 6 8169 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7647001 chr3 7411730 Intergenic 7 8084 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948 FUNCTIONAL_SNP rs7647276 chr3 7412023 Intergenic 7 8377 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11131072 chr3 7417400 Intergenic 7 13754 CEU:1.0;0.837, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs17654011 chr3 7413301 Intergenic 7 9655 CEU:1.0;0.887, CHB:1.0;0.95, JPT:1.0;1.0 LEAD_SNP rs9870680 chr3 7529555 Intergenic 5b ASSOCIATION 20038947 Major depressive disorder (broad) 6.0 GRM7 LEAD_SNP rs4591494 chr3 7982827 Intergenic 7 ASSOCIATION 17903294 Factor VII 5.04575749056 GRM7 - LMCD1 LEAD_SNP rs6807064 chr3 10535771 Intergenic 4 ASSOCIATION 19043545 Serum metabolites 7.0 ATP2B2 LEAD_SNP rs9990174 chr3 11040439 Intergenic 4 ASSOCIATION 18846501 Conduct disorder (interaction) 5.22184874962 SLC6A1 LEAD_SNP rs6782029 chr3 11675789 Intergenic 4 ASSOCIATION 21079607 Anorexia nervosa 5.04575749056 VGLL4 FUNCTIONAL_SNP rs6769094 chr3 11675810 Intergenic 4 21 CEU:1.0;1.0, CHB:1.0;0.866, JPT:0.943;0.734 LEAD_SNP rs6777876 chr3 11956598 Intergenic 6 ASSOCIATION 21314694 Alcohol dependence 6.39794000867 CYCSP12 - SYN2 LEAD_SNP rs17036101 chr3 12277845 Intergenic 6 ASSOCIATION 18372903 Type 2 diabetes 6.69897000434 TIMP4 - GSTM5P1 FUNCTIONAL_SNP rs13089415 chr3 12301360 Intergenic 7 23515 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13071168 chr3 12275447 Intergenic 7 2398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13081389 chr3 12289800 Intergenic 6 ASSOCIATION 20581827 Type 2 diabetes 6.69897000434 TIMP4 - GSTM5P1 FUNCTIONAL_SNP rs11709119 chr3 12276493 Intergenic 5a 13307 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17036101 chr3 12277845 Intergenic 6 11955 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17036130 chr3 12288288 Intergenic 6 1512 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1596417 chr3 12290898 Intergenic 7 1098 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13089415 chr3 12301360 Intergenic 7 11560 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13071168 chr3 12275447 Intergenic 7 14353 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6771792 chr3 12301472 Intergenic 7 11672 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1562040 chr3 12285405 Intergenic 7 4395 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1801282 chr3 12393125 Intergenic 7 ASSOCIATION 17463246 Type 2 diabetes 5.69897000434 PPARG ASSOCIATION 17463248 Type 2 diabetes 5.69897000434 PPARG ASSOCIATION 17463249 Type 2 diabetes 5.69897000434 PPARG LEAD_SNP rs3729931 chr3 12626516 Intergenic 5a ASSOCIATION 21348951 Cardiac hypertrophy 6.15490195999 RAF1 FUNCTIONAL_SNP rs3806661 chr3 12705855 Intergenic 4 79339 CEU:1.0;0.91, CHB:1.0;0.741, JPT:1.0;0.741 FUNCTIONAL_SNP rs9861472 chr3 12707776 Intergenic 6 81260 CEU:1.0;0.91, CHB:1.0;0.741, JPT:1.0;0.741 FUNCTIONAL_SNP rs9849171 chr3 12622623 Intergenic 7 3893 CEU:1.0;1.0, CHB:1.0;0.74, JPT:1.0;0.741 FUNCTIONAL_SNP rs7617041 chr3 12709167 Intergenic 7 82651 CEU:1.0;0.91, CHB:1.0;0.741, JPT:1.0;0.741 LEAD_SNP rs9846232 chr3 13743132 Intergenic 5b ASSOCIATION 21368711 Personality dimensions 8.0 FBLN2 - TRNASUP4P LEAD_SNP rs9036 chr3 14530721 Intergenic 7 ASSOCIATION 19734545 Cognitive performance 5.52287874528 SLC6A6 LEAD_SNP rs294636 chr3 14899778 Intergenic 7 ASSOCIATION 20595579 Longevity 6.69897000434 FGD5 FUNCTIONAL_SNP rs1689530 chr3 14894363 Intergenic 5b 5415 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4684241 chr3 14882553 Intergenic 7 17225 CEU:1.0;0.948, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs294631 chr3 14902928 Intergenic 7 3150 CEU:1.0;0.894, CHB:1.0;1.0 LEAD_SNP rs6442522 chr3 15440556 Intergenic 2b ASSOCIATION 18759275 Serum uric acid 5.30102999566 HMGN2L7 - METTL6 FUNCTIONAL_SNP rs6762167 chr3 15445037 Intergenic 5b 4481 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13075694 chr3 15450400 Intergenic 7 9844 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2219251 chr3 15429168 Intergenic 7 11388 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11918807 chr3 15446277 Intergenic 7 5721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7651039 chr3 15648004 Intergenic 4 ASSOCIATION 21378990 Coronary heart disease 5.69897000434 BTD LEAD_SNP rs690037 chr3 16395668 Intergenic 6 ASSOCIATION 20395239 Optic disc size (cup) 6.69897000434 RFTN1 FUNCTIONAL_SNP rs690437 chr3 16380890 Intergenic 5b 14778 CEU:1.0;0.884, CHB:0.748;0.56, JPT:0.892;0.69, YRI:1.0;0.53 FUNCTIONAL_SNP rs690573 chr3 16376440 Intergenic 5b 19228 CEU:0.953;0.867 FUNCTIONAL_SNP rs538525 chr3 16376279 Intergenic 5b 19389 CEU:0.957;0.842 FUNCTIONAL_SNP rs574083 chr3 16395513 Intergenic 7 155 CEU:1.0;0.96, CHB:1.0;0.91, JPT:1.0;0.953 FUNCTIONAL_SNP rs690023 chr3 16386354 Intergenic 7 9314 CEU:1.0;0.884, CHB:0.896;0.731, JPT:0.899;0.771 FUNCTIONAL_SNP rs689779 chr3 16393311 Intergenic 7 2357 CEU:0.957;0.845, CHB:0.949;0.821, JPT:1.0;0.909 LEAD_SNP rs12635698 chr3 16408489 Intergenic 5a ASSOCIATION 19553259 Obesity (extreme) 5.30102999566 RFTN1 LEAD_SNP rs1372072 chr3 16955259 Intergenic 5b ASSOCIATION 21399635 Primary biliary cirrhosis 7.69897000434 PLCL2 FUNCTIONAL_SNP rs11928330 chr3 16958367 Intergenic 4 3108 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11928414 chr3 16958463 Intergenic 4 3204 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.911 FUNCTIONAL_SNP rs9876137 chr3 16961265 Intergenic 5b 6006 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs9882937 chr3 16959532 Intergenic 5b 4273 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2014490 chr3 16972211 Intergenic 6 16952 CEU:1.0;0.956, CHB:0.947;0.779, JPT:0.897;0.805, YRI:0.9;0.771 FUNCTIONAL_SNP rs6799397 chr3 16951768 Intergenic 6 3491 CEU:1.0;0.829, CHB:1.0;0.868, JPT:1.0;0.906, YRI:1.0;0.732 FUNCTIONAL_SNP rs4685403 chr3 16957711 Intergenic 7 2452 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs9872237 chr3 16957332 Intergenic 7 2073 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs2881771 chr3 16951650 Intergenic 7 3609 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs11128810 chr3 16960181 Intergenic 7 4922 CEU:1.0;0.829, CHB:1.0;0.868, JPT:1.0;0.906 FUNCTIONAL_SNP rs983545 chr3 16959652 Intergenic 7 4393 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13073817 chr3 18706858 Intergenic 6 ASSOCIATION 21102463 Crohn's disease 8.15490195999 SATB1 - KCNH8 FUNCTIONAL_SNP rs11710774 chr3 18671995 Intergenic 3a 34863 CEU:1.0;0.891, CHB:1.0;1.0 FUNCTIONAL_SNP rs336607 chr3 18659119 Intergenic 5a 47739 CEU:1.0;0.957, JPT:1.0;1.0 FUNCTIONAL_SNP rs336611 chr3 18650507 Intergenic 6 56351 CEU:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs6550516 chr3 18647449 Intergenic 6 59409 CEU:1.0;0.898, JPT:1.0;1.0 FUNCTIONAL_SNP rs6792314 chr3 18673993 Intergenic 6 32865 CEU:1.0;0.957, CHB:1.0;0.659, JPT:1.0;0.79 FUNCTIONAL_SNP rs1398922 chr3 18670160 Intergenic 7 36698 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs447638 chr3 18639392 Intergenic 7 67466 CEU:1.0;0.916, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs11128892 chr3 18684046 Intergenic 7 22812 CEU:1.0;0.908, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs404552 chr3 18652605 Intergenic 7 54253 CEU:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs336609 chr3 18649451 Intergenic 7 57407 CEU:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs336612 chr3 18650561 Intergenic 7 56297 CEU:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs10780005 chr3 18693179 Intergenic 7 13679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs6809854 chr3 18784423 Intergenic 7 ASSOCIATION 20953190 Psoriasis 7.0 SATB1 - KCNH8 FUNCTIONAL_SNP rs7428395 chr3 18819993 Intergenic 6 35570 CEU:1.0;1.0, CHB:0.842;0.708, JPT:1.0;0.903 LEAD_SNP rs2053506 chr3 19375791 Intergenic 5b ASSOCIATION 17903296 Hip geometry 5.39794000867 KCNH8 LEAD_SNP rs11720452 chr3 21248642 Intergenic 7 ASSOCIATION 18711365 Bipolar disorder 5.30102999566 SGOL1 - VENTXP7 LEAD_SNP rs3821396 chr3 21706369 Intergenic 7 ASSOCIATION 18711365 Bipolar disorder 5.30102999566 ZNF385D LEAD_SNP rs1490157 chr3 21719246 Intergenic 6 ASSOCIATION 20522523 Partial epilepsies 5.30102999566 ZNF385D FUNCTIONAL_SNP rs986503 chr3 21714103 Intergenic 4 5143 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.704 FUNCTIONAL_SNP rs2335812 chr3 21689628 Intergenic 5b 29618 CEU:0.951;0.862 FUNCTIONAL_SNP rs12491351 chr3 21713210 Intergenic 5b 6036 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.744 FUNCTIONAL_SNP rs9881055 chr3 21695821 Intergenic 5b 23425 CEU:0.953;0.907 FUNCTIONAL_SNP rs4298061 chr3 21726363 Intergenic 6 7117 CEU:1.0;0.864, CHB:1.0;0.948, JPT:1.0;0.901, YRI:0.871;0.673 FUNCTIONAL_SNP rs11710743 chr3 21732114 Intergenic 7 12868 CEU:0.951;0.862, CHB:1.0;0.95, JPT:0.945;0.849, YRI:0.954;0.694 FUNCTIONAL_SNP rs9839129 chr3 21712555 Intergenic 7 6691 CEU:1.0;1.0, CHB:1.0;0.891, JPT:1.0;1.0, YRI:0.958;0.882 FUNCTIONAL_SNP rs1021351 chr3 21689194 Intergenic 7 30052 CEU:0.953;0.907 FUNCTIONAL_SNP rs9828403 chr3 21710507 Intergenic 7 8739 CEU:0.951;0.862, CHB:0.868;0.559, YRI:0.773;0.528 FUNCTIONAL_SNP rs6550619 chr3 21742649 Intergenic 7 23403 CEU:1.0;0.841, CHB:0.947;0.897, JPT:0.945;0.849 LEAD_SNP rs11719664 chr3 21955198 Intergenic 7 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.69897000434 ZNF385D - HMGB1L5 LEAD_SNP rs2593321 chr3 22122396 Intergenic 6 ASSOCIATION 20205591 HIV-1 control 5.09691001301 ZNF385D - HMGB1L5 FUNCTIONAL_SNP rs1904534 chr3 22123161 Intergenic 7 765 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.94 LEAD_SNP rs9310709 chr3 23093574 Intergenic 7 ASSOCIATION 20686651 Chronic kidney disease and serum creatinine levels 5.69897000434 HMGB1L5 - RPL24P7 LEAD_SNP rs9310736 chr3 24350811 Intergenic 7 ASSOCIATION 20139978 Hematological and biochemical traits 7.52287874528 THRB ASSOCIATION 20139978 Hematological and biochemical traits 9.39794000867 THRB LEAD_SNP rs993804 chr3 25112171 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.0 RPL31P20 - RARB FUNCTIONAL_SNP rs6550939 chr3 25091481 Intergenic 7 20690 CEU:1.0;0.953 FUNCTIONAL_SNP rs6786779 chr3 25090904 Intergenic 7 21267 CEU:1.0;0.953 FUNCTIONAL_SNP rs6791983 chr3 25111890 Intergenic 7 281 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9310769 chr3 25092767 Intergenic 7 19404 CEU:1.0;0.953 FUNCTIONAL_SNP rs9820531 chr3 25092086 Intergenic 7 20085 CEU:1.0;0.953 LEAD_SNP rs1435703 chr3 25560231 Intergenic 7 ASSOCIATION 19553259 Obesity (extreme) 5.39794000867 RARB FUNCTIONAL_SNP rs1435704 chr3 25562516 Intergenic 5a 2285 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17590545 chr3 25544438 Intergenic 6 15793 CEU:1.0;1.0 FUNCTIONAL_SNP rs7609566 chr3 25594185 Intergenic 6 33954 CEU:1.0;1.0 FUNCTIONAL_SNP rs7626008 chr3 25562070 Intergenic 7 1839 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1435702 chr3 25560167 Intergenic 7 64 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7647611 chr3 25562211 Intergenic 7 1980 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4973768 chr3 27416013 Intergenic 6 ASSOCIATION 21263130 Breast cancer 7.69897000434 SLC4A7 ASSOCIATION 20453838 Breast cancer 6.22184874962 SLC4A7 FUNCTIONAL_SNP rs552647 chr3 27353716 Intergenic 2b 62297 CEU:0.958;0.815, CHB:0.843;0.618, JPT:1.0;0.541 FUNCTIONAL_SNP rs1352941 chr3 27368425 Intergenic 3a 47588 CEU:0.958;0.917, CHB:0.918;0.643, JPT:1.0;0.574 FUNCTIONAL_SNP rs616820 chr3 27356779 Intergenic 4 59234 CEU:0.956;0.808, CHB:0.912;0.664, JPT:1.0;0.536 FUNCTIONAL_SNP rs491976 chr3 27367221 Intergenic 4 48792 CEU:0.957;0.844, CHB:0.918;0.643, JPT:1.0;0.608 FUNCTIONAL_SNP rs481519 chr3 27327214 Intergenic 5a 88799 CEU:0.958;0.815, CHB:0.843;0.618, JPT:1.0;0.51 FUNCTIONAL_SNP rs547518 chr3 27358405 Intergenic 5b 57608 CEU:0.958;0.815, CHB:0.837;0.65, JPT:1.0;0.574 FUNCTIONAL_SNP rs633157 chr3 27335350 Intergenic 5b 80663 CEU:0.957;0.812, CHB:0.842;0.615, JPT:1.0;0.536 FUNCTIONAL_SNP rs9842044 chr3 27263248 Intergenic 5b 152765 CEU:0.954;0.836, JPT:1.0;0.51 FUNCTIONAL_SNP rs628802 chr3 27341789 Intergenic 6 74224 CEU:0.956;0.841, CHB:0.832;0.596, JPT:1.0;0.508 FUNCTIONAL_SNP rs3213930 chr3 27297816 Intergenic 6 118197 CEU:0.958;0.815, CHB:0.847;0.668, JPT:1.0;0.574 FUNCTIONAL_SNP rs653465 chr3 27343644 Intergenic 6 72369 CEU:0.958;0.815, CHB:0.843;0.618, JPT:1.0;0.51 FUNCTIONAL_SNP rs1352944 chr3 27374101 Intergenic 6 41912 CEU:0.96;0.885, CHB:0.918;0.643, JPT:1.0;0.574 FUNCTIONAL_SNP rs1051545 chr3 27416999 Intergenic 6 986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7626742 chr3 27268398 Intergenic 6 147615 CEU:0.954;0.834, CHB:0.738;0.503, JPT:1.0;0.603 FUNCTIONAL_SNP rs2034190 chr3 27292557 Intergenic 7 123456 CEU:0.958;0.815, CHB:0.847;0.668, JPT:1.0;0.574 FUNCTIONAL_SNP rs472146 chr3 27337379 Intergenic 7 78634 CEU:1.0;0.849, CHB:0.832;0.596, JPT:1.0;0.564 FUNCTIONAL_SNP rs3920005 chr3 27368884 Intergenic 7 47129 CEU:0.953;0.83, CHB:0.917;0.68, JPT:1.0;0.606 FUNCTIONAL_SNP rs6551183 chr3 27281198 Intergenic 7 134815 CEU:0.957;0.811, CHB:0.839;0.572, JPT:1.0;0.51 FUNCTIONAL_SNP rs2100006 chr3 27273415 Intergenic 7 142598 CEU:0.957;0.812, CHB:0.839;0.572, JPT:1.0;0.51 FUNCTIONAL_SNP rs479566 chr3 27326999 Intergenic 7 89014 CEU:0.957;0.812, CHB:0.843;0.618, JPT:1.0;0.51 FUNCTIONAL_SNP rs2370942 chr3 27286810 Intergenic 7 129203 CEU:0.957;0.812, CHB:0.903;0.639 FUNCTIONAL_SNP rs580057 chr3 27345103 Intergenic 7 70910 CEU:0.958;0.815, CHB:0.843;0.618, JPT:1.0;0.569 FUNCTIONAL_SNP rs487930 chr3 27330335 Intergenic 7 85678 CEU:0.958;0.815, CHB:0.843;0.618, JPT:1.0;0.51 LEAD_SNP rs7617877 chr3 28705764 Intergenic 5b ASSOCIATION 21044948 Parkinson's disease 5.52287874528 RPL34P11 - MESTP4 FUNCTIONAL_SNP rs1461809 chr3 28704607 Intergenic 7 1157 CEU:1.0;0.958, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs6808178 chr3 28705690 Intergenic 7 74 CEU:0.955;0.873, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1530057 chr3 29575463 Intergenic 7 ASSOCIATION 19654303 Lung cancer 5.52287874528 RBMS3 LEAD_SNP rs10510628 chr3 29853403 Intergenic 7 ASSOCIATION 17903296 Bone mineral density 5.52287874528 RBMS3 FUNCTIONAL_SNP rs7629996 chr3 29848405 Intergenic 6 4998 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs2888165 chr3 29850292 Intergenic 7 3111 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 LEAD_SNP rs10510634 chr3 30346968 Intergenic 6 ASSOCIATION 17903298 Fasting plasma glucose 5.30102999566 RPS12P5 - TGFBR2 LEAD_SNP rs3773643 chr3 30710243 Intergenic 6 ASSOCIATION 17903302 Tonometry 6.69897000434 TGFBR2 LEAD_SNP rs17027625 chr3 31445580 Intergenic 6 ASSOCIATION 20041166 HIV-1 control 5.39794000867 THRAP3P1 LEAD_SNP rs1902341 chr3 31795570 Intergenic 5b ASSOCIATION 20610895 Peripheral artery disease 6.30102999566 OSBPL10 FUNCTIONAL_SNP rs1902342 chr3 31795522 Intergenic 5b 48 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12634834 chr3 31793357 Intergenic 6 2213 CEU:1.0;0.96, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.957;0.843 LEAD_SNP rs4380451 chr3 32329497 Intergenic 5b ASSOCIATION 18711365 Bipolar disorder 5.39794000867 CMTM8 LEAD_SNP rs12638540 chr3 32488534 Intergenic 7 ASSOCIATION 20400778 Mortality among heart failure patients 6.52287874528 CMTM7 LEAD_SNP rs9845475 chr3 32842101 Intergenic 4 ASSOCIATION 18937294 Attention deficit hyperactivity disorder (time to onset) 5.39794000867 RPL23AP43 - YPLR6490 LEAD_SNP rs13314993 chr3 33015469 Intergenic 5b ASSOCIATION 20190752 Celiac disease 8.52287874528 CCR4 - GLB1 FUNCTIONAL_SNP rs11129541 chr3 33018582 Intergenic 5b 3113 CEU:1.0;0.958, CHB:0.948;0.899, JPT:1.0;1.0 FUNCTIONAL_SNP rs9826253 chr3 33018097 Intergenic 7 2628 CEU:1.0;0.961, CHB:0.953;0.908, JPT:1.0;1.0, YRI:1.0;0.867 LEAD_SNP rs4678680 chr3 33020035 Intergenic 5b ASSOCIATION 21105107 Hepatocellular carcinoma 6.69897000434 CCR4 - GLB1 LEAD_SNP rs10514688 chr3 34962669 Intergenic 7 ASSOCIATION 17903302 Tonometry 5.22184874962 FECHP1 - KRT8P18 FUNCTIONAL_SNP rs4461374 chr3 34967873 Intergenic 5b 5204 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs885314 chr3 34940732 Intergenic 5b 21937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;0.9 FUNCTIONAL_SNP rs4292188 chr3 34971896 Intergenic 6 9227 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11129640 chr3 35142511 Intergenic 7 ASSOCIATION 21116278 Entorhinal cortical thickness 7.22184874962 FECHP1 - KRT8P18 FUNCTIONAL_SNP rs6786233 chr3 35144053 Intergenic 6 1542 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;0.518 FUNCTIONAL_SNP rs9843390 chr3 35126832 Intergenic 6 15679 CEU:1.0;0.939 FUNCTIONAL_SNP rs13096432 chr3 35166949 Intergenic 7 24438 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6799705 chr3 35982130 Intergenic 7 ASSOCIATION 19734545 Cognitive performance 6.69897000434 RPL36AP17 - STAC LEAD_SNP rs7631605 chr3 37234589 Intergenic 6 ASSOCIATION 20932310 P-tau181p 6.0 UBE2D3P2 - RPS16P4 FUNCTIONAL_SNP rs6786857 chr3 37205015 Intergenic 4 29574 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6800554 chr3 37143879 Intergenic 5a 90710 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs2302507 chr3 37144535 Intergenic 5b 90054 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs2241031 chr3 37090274 Intergenic 6 144315 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs9832138 chr3 37175960 Intergenic 6 58629 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs2286939 chr3 37062040 Intergenic 6 172549 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs963078 chr3 37220509 Intergenic 7 14080 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;0.927, YRI:1.0;1.0 FUNCTIONAL_SNP rs4234259 chr3 37048633 Intergenic 7 185956 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs3733029 chr3 37170750 Intergenic 7 63839 CEU:1.0;0.818, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2302503 chr3 37107470 Intergenic 7 127119 CEU:1.0;0.821, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs7643836 chr3 37148958 Intergenic 7 85631 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs6780799 chr3 37162758 Intergenic 7 71831 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs3774341 chr3 37045233 Intergenic 7 189356 CEU:1.0;0.829, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs6550445 chr3 37066369 Intergenic 7 168220 CEU:1.0;0.807, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs6550447 chr3 37078280 Intergenic 7 156309 CEU:1.0;0.818, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.828 FUNCTIONAL_SNP rs9852378 chr3 37038771 Intergenic 7 195818 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 LEAD_SNP rs189897 chr3 37518545 Intergenic 6 ASSOCIATION 19478819 Nasopharyngeal carcinoma 7.15490195999 ITGA9 LEAD_SNP rs9311171 chr3 37996477 Intergenic 7 ASSOCIATION 17903305 Prostate cancer 5.69897000434 CTDSPL FUNCTIONAL_SNP rs6791946 chr3 37993376 Intergenic 6 3101 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6791072 chr3 37992540 Intergenic 7 3937 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 LEAD_SNP rs2070488 chr3 38442490 Intergenic 7 ASSOCIATION 19389651 Electrocardiographic conduction measures 5.39794000867 XYLB LEAD_SNP rs11129795 chr3 38589163 Intergenic 7 ASSOCIATION 20062063 Electrocardiographic traits 9.30102999566 SCN5A ASSOCIATION 19305409 QT interval 13.3010299957 SCN5A FUNCTIONAL_SNP rs6771881 chr3 38578264 Intergenic 5b 10899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.94;0.834 FUNCTIONAL_SNP rs6781009 chr3 38585434 Intergenic 5b 3729 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6799868 chr3 38601556 Intergenic 5b 12393 CEU:1.0;0.864 FUNCTIONAL_SNP rs12497866 chr3 38575865 Intergenic 7 13298 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs10865879 chr3 38577362 Intergenic 7 11801 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.884 FUNCTIONAL_SNP rs12053903 chr3 38593393 Intergenic 7 4230 CEU:1.0;0.825 FUNCTIONAL_SNP rs6793245 chr3 38599037 Intergenic 7 9874 CEU:0.948;0.815 LEAD_SNP rs12053903 chr3 38593393 Intergenic 7 ASSOCIATION 20062063 Electrocardiographic traits 7.0 SCN5A ASSOCIATION 19305408 QT interval 14.0 SCN5A FUNCTIONAL_SNP rs6771881 chr3 38578264 Intergenic 5b 15129 CEU:1.0;0.825 FUNCTIONAL_SNP rs6781009 chr3 38585434 Intergenic 5b 7959 CEU:1.0;0.867 FUNCTIONAL_SNP rs6799868 chr3 38601556 Intergenic 5b 8163 CEU:1.0;0.954, JPT:1.0;0.532 FUNCTIONAL_SNP rs10865879 chr3 38577362 Intergenic 7 16031 CEU:1.0;0.854 FUNCTIONAL_SNP rs6793245 chr3 38599037 Intergenic 7 5644 CEU:1.0;0.91, JPT:0.94;0.663 FUNCTIONAL_SNP rs7429945 chr3 38591689 Intergenic 7 1704 CEU:0.952;0.827, CHB:1.0;0.952, JPT:0.948;0.817 FUNCTIONAL_SNP rs11129795 chr3 38589163 Intergenic 7 4230 CEU:1.0;0.825 FUNCTIONAL_SNP rs1805126 chr3 38592406 Intergenic 7 987 CEU:0.952;0.827, CHB:1.0;0.952, JPT:0.902;0.814 FUNCTIONAL_SNP rs12497866 chr3 38575865 Intergenic 7 17528 CEU:1.0;0.867 LEAD_SNP rs7638909 chr3 38594973 Intergenic 7 ASSOCIATION 19389651 Electrocardiographic conduction measures 5.69897000434 SCN5A LEAD_SNP rs3922844 chr3 38624253 Intergenic 5b ASSOCIATION 21347284 PR interval 22.5228787453 SCN5A LEAD_SNP rs11708996 chr3 38633923 Intergenic 5b ASSOCIATION 21076409 Ventricular conduction 5.15490195999 SCN5A ASSOCIATION 20062060 PR interval 25.2218487496 SCN5A LEAD_SNP rs11710077 chr3 38657899 Intergenic 5b ASSOCIATION 21076409 Ventricular conduction 6.0 SCN5A LEAD_SNP rs9851724 chr3 38719935 Intergenic 5a ASSOCIATION 21076409 Ventricular conduction 15.2218487496 SCN5A - SCN10A FUNCTIONAL_SNP rs9851710 chr3 38719901 Intergenic 5a 34 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6599234 chr3 38715300 Intergenic 6 4635 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7633988 chr3 38723217 Intergenic 7 3282 CEU:1.0;1.0, CHB:0.936;0.876, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6795970 chr3 38766675 Intergenic 7 ASSOCIATION 20062061 Electrocardiographic traits 14.5228787453 SCN10A ASSOCIATION 20062063 Electrocardiographic traits 8.39794000867 SCN10A ASSOCIATION 20062063 Electrocardiographic traits 58.0 SCN10A FUNCTIONAL_SNP rs6801957 chr3 38767315 Intergenic 4 640 CEU:1.0;0.96, CHB:1.0;0.642, JPT:1.0;0.706 FUNCTIONAL_SNP rs6790396 chr3 38771925 Intergenic 4 5250 CEU:0.946;0.811 FUNCTIONAL_SNP rs10428132 chr3 38777554 Intergenic 5a 10879 CEU:0.96;0.921, CHB:0.901;0.557, JPT:0.91;0.584 FUNCTIONAL_SNP rs6783110 chr3 38752935 Intergenic 5b 13740 CEU:1.0;1.0, JPT:0.917;0.726 FUNCTIONAL_SNP rs6599250 chr3 38784029 Intergenic 5b 17354 CEU:0.96;0.921, CHB:1.0;0.834, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs6599254 chr3 38795555 Intergenic 6 28880 CEU:0.96;0.921, CHB:1.0;0.916, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs6800541 chr3 38774832 Intergenic 7 8157 CEU:0.96;0.921, CHB:1.0;0.916, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs6798015 chr3 38798836 Intergenic 7 32161 CEU:0.956;0.809, CHB:0.886;0.516, JPT:0.897;0.549 FUNCTIONAL_SNP rs4076737 chr3 38764782 Intergenic 7 1893 CEU:1.0;1.0, JPT:0.917;0.726 FUNCTIONAL_SNP rs7433306 chr3 38770639 Intergenic 7 3964 CEU:1.0;0.959, CHB:1.0;0.91, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs9844577 chr3 38788728 Intergenic 7 22053 CEU:0.956;0.877, CHB:0.901;0.812, JPT:0.913;0.714, YRI:1.0;1.0 FUNCTIONAL_SNP rs11924846 chr3 38756566 Intergenic 7 10109 CEU:1.0;1.0, JPT:0.915;0.674 FUNCTIONAL_SNP rs7433723 chr3 38784957 Intergenic 7 18282 CEU:0.96;0.921, JPT:0.91;0.584 LEAD_SNP rs6801957 chr3 38767315 Intergenic 4 ASSOCIATION 21076409 Ventricular conduction 13.5228787453 SCN10A FUNCTIONAL_SNP rs10428132 chr3 38777554 Intergenic 5a 10239 CEU:1.0;0.96, CHB:1.0;0.936, JPT:0.936;0.875 FUNCTIONAL_SNP rs6783110 chr3 38752935 Intergenic 5b 14380 CEU:1.0;0.96 FUNCTIONAL_SNP rs6599250 chr3 38784029 Intergenic 5b 16714 CEU:1.0;0.96, CHB:1.0;0.535, JPT:1.0;0.652 FUNCTIONAL_SNP rs6599254 chr3 38795555 Intergenic 6 28240 CEU:1.0;0.96, CHB:1.0;0.588, JPT:1.0;0.652 FUNCTIONAL_SNP rs6800541 chr3 38774832 Intergenic 7 7517 CEU:1.0;0.96, CHB:1.0;0.588, JPT:1.0;0.652 FUNCTIONAL_SNP rs6798015 chr3 38798836 Intergenic 7 31521 CEU:0.955;0.84, CHB:1.0;0.93, JPT:0.93;0.866 FUNCTIONAL_SNP rs4076737 chr3 38764782 Intergenic 7 2533 CEU:0.96;0.921 FUNCTIONAL_SNP rs6795970 chr3 38766675 Intergenic 7 640 CEU:1.0;0.96, CHB:1.0;0.642, JPT:1.0;0.706 FUNCTIONAL_SNP rs6599251 chr3 38785809 Intergenic 7 18494 CEU:1.0;0.825 FUNCTIONAL_SNP rs6599255 chr3 38796415 Intergenic 7 29100 CEU:0.958;0.817, CHB:1.0;0.938, JPT:0.937;0.827, YRI:1.0;0.521 FUNCTIONAL_SNP rs7433306 chr3 38770639 Intergenic 7 3324 CEU:0.96;0.922, CHB:1.0;0.572, JPT:1.0;0.665 FUNCTIONAL_SNP rs9844577 chr3 38788728 Intergenic 7 21413 CEU:1.0;0.917 FUNCTIONAL_SNP rs11924846 chr3 38756566 Intergenic 7 10749 CEU:1.0;0.96 FUNCTIONAL_SNP rs7433723 chr3 38784957 Intergenic 7 17642 CEU:1.0;0.96, CHB:1.0;0.874, JPT:0.936;0.875, YRI:0.889;0.791 LEAD_SNP rs6800541 chr3 38774832 Intergenic 7 ASSOCIATION 21041692 Atrioventricular conduction 6.30102999566 SCN10A ASSOCIATION 20062060 PR interval 73.6989700043 SCN10A FUNCTIONAL_SNP rs6801957 chr3 38767315 Intergenic 4 7517 CEU:1.0;0.96, CHB:1.0;0.588, JPT:1.0;0.652 FUNCTIONAL_SNP rs6790396 chr3 38771925 Intergenic 4 2907 CEU:1.0;0.905 FUNCTIONAL_SNP rs10428132 chr3 38777554 Intergenic 5a 2722 CEU:1.0;1.0, CHB:1.0;0.628, JPT:1.0;0.652 FUNCTIONAL_SNP rs6783110 chr3 38752935 Intergenic 5b 21897 CEU:0.96;0.921, JPT:1.0;0.797 FUNCTIONAL_SNP rs6599250 chr3 38784029 Intergenic 5b 9197 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6599254 chr3 38795555 Intergenic 6 20723 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6798015 chr3 38798836 Intergenic 7 24004 CEU:1.0;0.886, CHB:1.0;0.594, JPT:1.0;0.625 FUNCTIONAL_SNP rs4076737 chr3 38764782 Intergenic 7 10050 CEU:0.958;0.917, JPT:1.0;0.797 FUNCTIONAL_SNP rs6795970 chr3 38766675 Intergenic 7 8157 CEU:0.96;0.921, CHB:1.0;0.916, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs6599251 chr3 38785809 Intergenic 7 10977 CEU:1.0;0.853 FUNCTIONAL_SNP rs6599255 chr3 38796415 Intergenic 7 21583 CEU:0.958;0.847, CHB:1.0;0.626, JPT:1.0;0.652 FUNCTIONAL_SNP rs7433306 chr3 38770639 Intergenic 7 4193 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9844577 chr3 38788728 Intergenic 7 13896 CEU:1.0;0.959, CHB:1.0;0.904, JPT:1.0;0.787, YRI:1.0;1.0 FUNCTIONAL_SNP rs11924846 chr3 38756566 Intergenic 7 18266 CEU:0.96;0.921, JPT:1.0;0.744 FUNCTIONAL_SNP rs7433723 chr3 38784957 Intergenic 7 10125 CEU:1.0;1.0, CHB:0.895;0.539, JPT:1.0;0.652 LEAD_SNP rs1768208 chr3 39523003 Intron 7 ASSOCIATION 21685912 Progressive supranuclear palsy 16.3010299957 MOBP FUNCTIONAL_SNP rs631312 chr3 39508968 Intergenic 5b 14035 CEU:0.951;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs616147 chr3 39534481 Intron 5b 11478 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1708104 chr3 39534742 Intron 6 11739 CEU:1.0;0.91, CHB:1.0;0.952, JPT:1.0;0.907 FUNCTIONAL_SNP rs545397 chr3 39530083 Intron 7 7080 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1513219 chr3 39533759 Intron 7 10756 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs816488 chr3 39553788 Intron 5b ASSOCIATION 19734545 Cognitive performance 5.39794000867 MOBP FUNCTIONAL_SNP rs816489 chr3 39554439 Intron 6 651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs864643 chr3 39555580 Exon,non-coding 5b ASSOCIATION 18839057 Attention deficit hyperactivity disorder 8.0 MOBP FUNCTIONAL_SNP rs587054 chr3 39565987 Exon,non-coding 5a 10407 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.829, YRI:1.0;0.815 FUNCTIONAL_SNP rs505176 chr3 39566348 Exon,non-coding 6 10768 CEU:1.0;0.89, CHB:1.0;0.939, JPT:1.0;0.941, YRI:1.0;0.878 FUNCTIONAL_SNP rs816491 chr3 39555497 Exon,non-coding 5b 83 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs816492 chr3 39556155 Exon,non-coding 7 575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs704962 chr3 39557120 Exon,non-coding 5b 1540 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.883 FUNCTIONAL_SNP rs1708056 chr3 39573153 Intergenic 2b 17573 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.858, YRI:1.0;0.906 FUNCTIONAL_SNP rs1768134 chr3 39574571 Intergenic 4 18991 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs661366 chr3 39561348 Intron 4 5768 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.884, YRI:1.0;0.88 FUNCTIONAL_SNP rs1768262 chr3 39553276 Intron 5b 2304 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.884, YRI:1.0;0.887 FUNCTIONAL_SNP rs1355733 chr3 39562656 Intron 5b 7076 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.884, YRI:1.0;0.885 FUNCTIONAL_SNP rs581691 chr3 39550735 Intron 6 4845 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.884, YRI:1.0;0.887 FUNCTIONAL_SNP rs689352 chr3 39550766 Intron 6 4814 CEU:1.0;1.0, CHB:1.0;0.85, JPT:1.0;0.931, YRI:1.0;0.903 FUNCTIONAL_SNP rs1513214 chr3 39560265 Intron 6 4685 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.884, YRI:1.0;0.887 FUNCTIONAL_SNP rs816520 chr3 39569713 Intergenic 6 14133 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.876, YRI:1.0;0.887 FUNCTIONAL_SNP rs1708001 chr3 39567205 Intergenic 6 11625 CEU:1.0;0.89, CHB:1.0;0.942, JPT:1.0;1.0, YRI:0.956;0.842 FUNCTIONAL_SNP rs572971 chr3 39561427 Intron 7 5847 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.884, YRI:1.0;0.887 FUNCTIONAL_SNP rs1768127 chr3 39565281 Intron 7 9701 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1340222 chr3 39549803 Intron 7 5777 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.884, YRI:1.0;0.887 FUNCTIONAL_SNP rs1768267 chr3 39560436 Intron 7 4856 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.884, YRI:1.0;0.887 FUNCTIONAL_SNP rs1708002 chr3 39552676 Intron 7 2904 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs602527 chr3 39568784 Intergenic 7 13204 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.884, YRI:1.0;0.887 FUNCTIONAL_SNP rs1707988 chr3 39551526 Intron 7 4054 CEU:1.0;1.0, CHB:1.0;0.857, JPT:1.0;0.871, YRI:1.0;0.901 FUNCTIONAL_SNP rs1708000 chr3 39567136 Intergenic 7 11556 CEU:1.0;0.89, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.883 FUNCTIONAL_SNP rs634338 chr3 39564243 Intron 7 8663 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2542 chr3 39567349 Intergenic 7 11769 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9985399 chr3 40008634 Intron 7 ASSOCIATION 21130836 Information processing speed 5.04575749056 MYRIP FUNCTIONAL_SNP rs6774206 chr3 40018790 Intron 4 10156 CEU:1.0;1.0, CHB:1.0;0.761, JPT:1.0;1.0, YRI:0.956;0.724 FUNCTIONAL_SNP rs12635772 chr3 40005585 Intron 6 3049 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;0.945, YRI:0.959;0.738 FUNCTIONAL_SNP rs6808199 chr3 40013870 Intron 6 5236 CEU:1.0;1.0, YRI:0.955;0.72 FUNCTIONAL_SNP rs4128233 chr3 40045100 Intron 6 36466 CEU:1.0;1.0, CHB:1.0;0.763, JPT:1.0;1.0, YRI:0.962;0.893 FUNCTIONAL_SNP rs6802685 chr3 40007027 Intron 6 1607 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;0.945, YRI:0.915;0.669 FUNCTIONAL_SNP rs7611706 chr3 40012432 Intron 7 3798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.74 FUNCTIONAL_SNP rs4676552 chr3 40048084 Intron 7 39450 CEU:1.0;1.0, CHB:1.0;0.763, JPT:1.0;1.0, YRI:0.962;0.893 FUNCTIONAL_SNP rs17067132 chr3 40002028 Intron 7 6606 CEU:1.0;1.0, CHB:1.0;0.706, JPT:1.0;0.945, YRI:0.96;0.824 FUNCTIONAL_SNP rs9862625 chr3 40014166 Intron 7 5532 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.733 FUNCTIONAL_SNP rs9311228 chr3 40014277 Intron 7 5643 CEU:1.0;1.0, CHB:1.0;0.878, JPT:1.0;0.892, YRI:1.0;0.896 LEAD_SNP rs6599077 chr3 40096618 Intron 4 ASSOCIATION 17903308 Sleep duration 7.0 MYRIP FUNCTIONAL_SNP rs9863428 chr3 40099571 Intron 5b 2953 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9832726 chr3 40097576 Intron 5b 958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7637811 chr3 40096412 Intron 5b 206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4676560 chr3 40097649 Intron 5b 1031 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6766178 chr3 40098109 Intron 5b 1491 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs6763643 chr3 40097991 Intron 5b 1373 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942, YRI:1.0;1.0 FUNCTIONAL_SNP rs9848462 chr3 40097204 Intron 6 586 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6782134 chr3 40100692 Intron 6 4074 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4676563 chr3 40105092 Intron 6 8474 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9860449 chr3 40094033 Intron 6 2585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9860463 chr3 40094062 Intron 6 2556 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9311232 chr3 40105850 Intron 7 9232 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.96 FUNCTIONAL_SNP rs9867011 chr3 40105468 Intron 7 8850 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10510706 chr3 40100257 Intron 7 3639 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11706046 chr3 40104137 Intron 7 7519 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4676562 chr3 40105039 Intron 7 8421 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4676566 chr3 40108636 Intron 7 12018 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs9853925 chr3 40107295 Intron 7 10677 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.965 FUNCTIONAL_SNP rs11920120 chr3 40094795 Intron 7 1823 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9809788 chr3 40103734 Intron 7 7116 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.965 FUNCTIONAL_SNP rs9311231 chr3 40105683 Intron 7 9065 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;1.0 LEAD_SNP rs10490823 chr3 41123735 Intergenic 7 ASSOCIATION 19079262 Bone mineral density (hip) 5.04575749056 RPS27P4 - MRPS31P1 FUNCTIONAL_SNP rs2024219 chr3 41146355 Intergenic 6 22620 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;0.812, YRI:1.0;1.0 FUNCTIONAL_SNP rs107253 chr3 41137232 Intergenic 7 13497 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.84 FUNCTIONAL_SNP rs12488439 chr3 41147971 Intergenic 7 24236 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;0.812, YRI:1.0;0.847 LEAD_SNP rs87938 chr3 41137672 Intergenic 6 ASSOCIATION 19801982 Bone mineral density (hip) 9.09691001301 RPS27P4 - MRPS31P1 FUNCTIONAL_SNP rs107236 chr3 41117745 Intergenic 2b 19927 CEU:1.0;1.0, CHB:1.0;0.735, JPT:1.0;0.583 FUNCTIONAL_SNP rs384934 chr3 41114867 Intergenic 4 22805 CEU:1.0;1.0 FUNCTIONAL_SNP rs383911 chr3 41122345 Intergenic 4 15327 CEU:1.0;1.0, CHB:1.0;0.545, JPT:1.0;0.562 FUNCTIONAL_SNP rs406589 chr3 41125313 Intergenic 4 12359 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.949 FUNCTIONAL_SNP rs430848 chr3 41120417 Intergenic 5a 17255 CEU:1.0;1.0 FUNCTIONAL_SNP rs412476 chr3 41119680 Intergenic 5a 17992 CEU:1.0;1.0 FUNCTIONAL_SNP rs444561 chr3 41127606 Intergenic 5a 10066 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs431052 chr3 41120307 Intergenic 5a 17365 CEU:1.0;1.0 FUNCTIONAL_SNP rs398993 chr3 41143191 Intergenic 5a 5519 CEU:1.0;0.96, CHB:1.0;0.573 FUNCTIONAL_SNP rs385905 chr3 41127511 Intergenic 5a 10161 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.949 FUNCTIONAL_SNP rs431867 chr3 41119907 Intergenic 5a 17765 CEU:1.0;1.0 FUNCTIONAL_SNP rs423170 chr3 41145025 Intergenic 5b 7353 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.943;0.8, YRI:1.0;0.949 FUNCTIONAL_SNP rs87939 chr3 41137844 Intergenic 5b 172 CEU:1.0;1.0, CHB:1.0;0.545, JPT:1.0;0.562 FUNCTIONAL_SNP rs454690 chr3 41179628 Intergenic 5b 41956 CEU:0.917;0.807, YRI:0.782;0.58 FUNCTIONAL_SNP rs376362 chr3 41111939 Intergenic 5b 25733 CEU:1.0;1.0 FUNCTIONAL_SNP rs4437116 chr3 41161343 Intergenic 5b 23671 CEU:0.918;0.843 FUNCTIONAL_SNP rs17280306 chr3 41168084 Intergenic 5b 30412 CEU:0.917;0.807 FUNCTIONAL_SNP rs1156916 chr3 41158322 Intergenic 5b 20650 CEU:0.918;0.843 FUNCTIONAL_SNP rs6772565 chr3 41157267 Intergenic 5b 19595 CEU:0.914;0.835 FUNCTIONAL_SNP rs11720396 chr3 41162974 Intergenic 5b 25302 CEU:0.915;0.838 FUNCTIONAL_SNP rs401680 chr3 41127094 Intergenic 6 10578 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.948 FUNCTIONAL_SNP rs7621892 chr3 41168607 Intergenic 6 30935 CEU:0.917;0.807, CHB:0.709;0.503 FUNCTIONAL_SNP rs2024219 chr3 41146355 Intergenic 6 8683 CEU:0.959;0.92, CHB:1.0;0.545 FUNCTIONAL_SNP rs391459 chr3 41116506 Intergenic 6 21166 CEU:1.0;0.958 FUNCTIONAL_SNP rs367027 chr3 41133421 Intergenic 6 4251 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.949 FUNCTIONAL_SNP rs419918 chr3 41118898 Intergenic 6 18774 CEU:1.0;0.96 FUNCTIONAL_SNP rs428510 chr3 41138172 Intergenic 6 500 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.62 FUNCTIONAL_SNP rs422623 chr3 41123512 Intergenic 6 14160 CEU:1.0;1.0, JPT:1.0;0.562 FUNCTIONAL_SNP rs436448 chr3 41121251 Intergenic 6 16421 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.95 FUNCTIONAL_SNP rs368006 chr3 41141192 Intergenic 7 3520 CEU:1.0;1.0 FUNCTIONAL_SNP rs430727 chr3 41128564 Intergenic 7 9108 CEU:1.0;0.96, CHB:1.0;0.947, JPT:1.0;0.949 FUNCTIONAL_SNP rs12488439 chr3 41147971 Intergenic 7 10299 CEU:0.959;0.92, CHB:1.0;0.545 FUNCTIONAL_SNP rs9832204 chr3 41180345 Intergenic 7 42673 CEU:0.917;0.807 FUNCTIONAL_SNP rs442115 chr3 41118450 Intergenic 7 19222 CEU:1.0;1.0, CHB:1.0;0.773, JPT:1.0;0.641 FUNCTIONAL_SNP rs375583 chr3 41177604 Intergenic 7 39932 CEU:0.917;0.807, YRI:0.734;0.512 FUNCTIONAL_SNP rs11717807 chr3 41113327 Intergenic 7 24345 CEU:1.0;1.0 FUNCTIONAL_SNP rs446717 chr3 41147757 Intergenic 7 10085 CEU:0.916;0.838, CHB:1.0;1.0, JPT:0.938;0.747, YRI:1.0;0.949 FUNCTIONAL_SNP rs378422 chr3 41168253 Intergenic 7 30581 CEU:0.917;0.807, CHB:0.709;0.503, YRI:0.83;0.619 FUNCTIONAL_SNP rs417183 chr3 41168852 Intergenic 7 31180 CEU:0.915;0.804, CHB:0.75;0.532, YRI:0.819;0.57 FUNCTIONAL_SNP rs108606 chr3 41155615 Intergenic 7 17943 CEU:0.957;0.844, CHB:0.944;0.845, JPT:0.884;0.704, YRI:1.0;0.85 FUNCTIONAL_SNP rs440640 chr3 41147769 Intergenic 7 10097 CEU:0.957;0.916, CHB:1.0;0.946, JPT:0.94;0.754, YRI:1.0;0.944 FUNCTIONAL_SNP rs4973920 chr3 41155345 Intergenic 7 17673 CEU:0.957;0.844, CHB:1.0;0.545 FUNCTIONAL_SNP rs401349 chr3 41127215 Intergenic 7 10457 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs10490823 chr3 41123735 Intergenic 7 13937 CEU:1.0;1.0, CHB:1.0;0.545, JPT:1.0;0.562 FUNCTIONAL_SNP rs7632244 chr3 41168955 Intergenic 7 31283 CEU:0.915;0.804 FUNCTIONAL_SNP rs450615 chr3 41133610 Intergenic 7 4062 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs7642431 chr3 41164908 Intergenic 7 27236 CEU:0.917;0.807 FUNCTIONAL_SNP rs378967 chr3 41139102 Intergenic 7 1430 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.849 FUNCTIONAL_SNP rs1984856 chr3 41157575 Intergenic 7 19903 CEU:0.918;0.843, CHB:0.931;0.66 FUNCTIONAL_SNP rs436705 chr3 41116831 Intergenic 7 20841 CEU:1.0;1.0, CHB:1.0;0.735, JPT:1.0;0.583 FUNCTIONAL_SNP rs416486 chr3 41113076 Intergenic 7 24596 CEU:1.0;1.0 FUNCTIONAL_SNP rs428903 chr3 41136713 Intergenic 7 959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.932 FUNCTIONAL_SNP rs415997 chr3 41129297 Intergenic 7 8375 CEU:1.0;1.0, CHB:1.0;0.573, JPT:1.0;0.562 FUNCTIONAL_SNP rs411124 chr3 41135363 Intergenic 7 2309 CEU:1.0;1.0, JPT:1.0;0.562 FUNCTIONAL_SNP rs107253 chr3 41137232 Intergenic 7 440 CEU:1.0;1.0, CHB:1.0;0.545, JPT:1.0;0.562 FUNCTIONAL_SNP rs4974070 chr3 41167353 Intergenic 7 29681 CEU:0.917;0.807 FUNCTIONAL_SNP rs436767 chr3 41153171 Intergenic 7 15499 CEU:0.958;0.919, CHB:1.0;0.573 FUNCTIONAL_SNP rs369145 chr3 41174299 Intergenic 7 36627 CEU:0.917;0.807, CHB:0.709;0.503, YRI:0.781;0.579 FUNCTIONAL_SNP rs399996 chr3 41138550 Intergenic 7 878 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.853 LEAD_SNP rs9815354 chr3 41912651 Intron 6 ASSOCIATION 19430479 Diastolic blood pressure 8.52287874528 ULK4 FUNCTIONAL_SNP rs3774372 chr3 41877414 Coding 6 35237 CEU:0.944;0.891, CHB:1.0;0.851, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6789260 chr3 41776350 Intron 5b 136301 CEU:0.945;0.894, CHB:1.0;0.859, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs9873207 chr3 41884750 Intron 5b 27901 CEU:0.944;0.891, CHB:1.0;0.842, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1994157 chr3 41897482 Intron 6 15169 CEU:0.935;0.875, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9854833 chr3 41775577 Intron 6 137074 CEU:0.944;0.891, CHB:1.0;0.851, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9823254 chr3 41894768 Intron 7 17883 CEU:0.945;0.894, CHB:1.0;0.859, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9846634 chr3 41894049 Intron 7 18602 CEU:0.944;0.845, CHB:1.0;0.859, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs13325965 chr3 41914942 Intron 7 2291 CEU:0.944;0.891, CHB:1.0;0.851, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9850310 chr3 41891098 Intron 7 21553 CEU:0.945;0.894, CHB:1.0;0.859, JPT:1.0;1.0, YRI:1.0;0.94 LEAD_SNP rs2286720 chr3 42448471 Coding 7 ASSOCIATION 21107309 Reasoning 6.0 LYZL4 LEAD_SNP rs17075286 chr3 43230723 Intergenic 6 ASSOCIATION 21057379 Bipolar disorder and schizophrenia 6.09691001301 C3orf39 - SNRK FUNCTIONAL_SNP rs17075234 chr3 43195379 Intergenic 2b 35344 CEU:1.0;1.0 FUNCTIONAL_SNP rs6802999 chr3 43240579 Intergenic 5a 9856 CEU:1.0;1.0, CHB:0.903;0.815, JPT:1.0;0.851 FUNCTIONAL_SNP rs4146792 chr3 43038237 Intron 5b 192486 CEU:1.0;1.0 FUNCTIONAL_SNP rs17075293 chr3 43238452 Intergenic 5b 7729 CEU:1.0;1.0, CHB:0.893;0.721, JPT:1.0;0.851 FUNCTIONAL_SNP rs1875129 chr3 43032955 Intron 5b 197768 CEU:1.0;1.0 FUNCTIONAL_SNP rs4683366 chr3 43254320 Intergenic 6 23597 CEU:1.0;1.0 FUNCTIONAL_SNP rs6767821 chr3 43238338 Intergenic 7 7615 CEU:1.0;1.0, CHB:0.902;0.813, JPT:1.0;0.915 LEAD_SNP rs17279437 chr3 45814094 Coding 5b ASSOCIATION 21572414 Urinary metabolites 18.5228787453 SLC6A20 FUNCTIONAL_SNP rs9867918 chr3 45807699 Intron 4 6395 CEU:1.0;0.815, JPT:1.0;1.0 FUNCTIONAL_SNP rs4327428 chr3 45809329 Intron 7 4765 CEU:1.0;0.899, JPT:1.0;1.0 FUNCTIONAL_SNP rs9857669 chr3 45806066 Intron 7 8028 CEU:1.0;0.815, JPT:1.0;1.0 FUNCTIONAL_SNP rs9818982 chr3 45812514 Intron 7 1580 CEU:1.0;0.899 LEAD_SNP rs13098911 chr3 46235201 Intron 3a ASSOCIATION 20190752 Celiac disease 16.5228787453 XCR1 - CCR1 FUNCTIONAL_SNP rs4987053 chr3 46306700 Coding 6 71499 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs3136667 chr3 46244284 Exon,non-coding 6 9083 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3181080 chr3 46249929 Intron 2a 14728 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs13092160 chr3 46254791 Intron 4 19590 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs11919943 chr3 46266726 Intron 5a 31525 CEU:1.0;0.866, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs10510749 chr3 46180416 Intergenic 5a 54785 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17765307 chr3 46385161 Intergenic 5a 149960 CEU:1.0;1.0, CHB:1.0;0.696 FUNCTIONAL_SNP rs13095946 chr3 46253812 Intron 5b 18611 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs13089543 chr3 46183560 Intergenic 5b 51641 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9832730 chr3 46297711 Intron 5b 62510 CEU:1.0;1.0, CHB:1.0;0.846 FUNCTIONAL_SNP rs2856762 chr3 46413334 Intron 5b 178133 CEU:1.0;0.866, CHB:1.0;0.697 FUNCTIONAL_SNP rs13075270 chr3 46253789 Intron 5b 18588 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs13096808 chr3 46274906 Intron 5b 39705 CEU:1.0;1.0, CHB:1.0;0.585 FUNCTIONAL_SNP rs17282922 chr3 46240172 Intron 5b 4971 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3091310 chr3 46303697 Intron 5b 68496 CEU:1.0;1.0 FUNCTIONAL_SNP rs13080979 chr3 46233690 Intron 5b 1511 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13084057 chr3 46184725 Intergenic 5b 50476 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10510750 chr3 46274886 Intron 5b 39685 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs13096371 chr3 46247096 Intron 5b 11895 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs3181076 chr3 46250733 Intron 6 15532 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs13073976 chr3 46286663 Intron 6 51462 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs1542755 chr3 46272440 Intron 6 37239 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs13097340 chr3 46187118 Intergenic 6 48083 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17282797 chr3 46232765 Intron 6 2436 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6775046 chr3 46268772 Intron 6 33571 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;0.658 FUNCTIONAL_SNP rs13070099 chr3 46253214 Intron 6 18013 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs13062450 chr3 46227171 Intron 6 8030 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13077302 chr3 46329475 Intergenic 6 94274 CEU:1.0;1.0, CHB:1.0;0.846 FUNCTIONAL_SNP rs17282391 chr3 46179481 Intergenic 6 55720 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13096307 chr3 46246953 Intron 6 11752 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs3176825 chr3 46248224 Intron 6 13023 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs3176826 chr3 46247584 Intron 6 12383 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs13096325 chr3 46186838 Intergenic 6 48363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10510748 chr3 46178538 Intergenic 6 56663 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13061548 chr3 46226646 Intron 6 8555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3136672 chr3 46242785 Intron 6 7584 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3136673 chr3 46242616 Intron 6 7415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7620586 chr3 46267737 Intron 6 32536 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0 FUNCTIONAL_SNP rs2373156 chr3 46266379 Intron 7 31178 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs17284138 chr3 46331852 Intergenic 7 96651 CEU:1.0;1.0, CHB:1.0;0.846 FUNCTIONAL_SNP rs11926063 chr3 46263717 Intron 7 28516 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs17284187 chr3 46332999 Intergenic 7 97798 CEU:1.0;1.0, CHB:1.0;0.846 FUNCTIONAL_SNP rs17283712 chr3 46304064 Intron 7 68863 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;0.659 FUNCTIONAL_SNP rs7628489 chr3 46267875 Intron 7 32674 CEU:1.0;1.0, CHB:1.0;0.823 FUNCTIONAL_SNP rs3091314 chr3 46188753 Intergenic 7 46448 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7631551 chr3 46186310 Intergenic 7 48891 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13097666 chr3 46234467 Intron 7 734 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7651539 chr3 46268079 Intron 7 32878 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs17217831 chr3 46305441 Intron 7 70240 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs13100243 chr3 46317898 Intergenic 7 82697 CEU:1.0;1.0, CHB:1.0;0.846 FUNCTIONAL_SNP rs4473594 chr3 46337356 Intergenic 7 102155 CEU:1.0;1.0, CHB:1.0;0.846 FUNCTIONAL_SNP rs13067058 chr3 46273766 Intron 7 38565 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs9810242 chr3 46313334 Intergenic 7 78133 CEU:1.0;1.0, CHB:1.0;0.823 FUNCTIONAL_SNP rs13075836 chr3 46186638 Intergenic 7 48563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13069750 chr3 46224850 Intron 7 10351 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7624155 chr3 46269136 Intron 7 33935 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.658 FUNCTIONAL_SNP rs9838191 chr3 46298901 Intron 7 63700 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 FUNCTIONAL_SNP rs13088766 chr3 46258226 Intron 7 23025 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.659 LEAD_SNP rs9990343 chr3 46339812 Intergenic 4 ASSOCIATION 20171287 Brain structure 6.39794000867 CCR3 - CCR2 FUNCTIONAL_SNP rs6441957 chr3 46339223 Intergenic 5b 589 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.691 FUNCTIONAL_SNP rs6803980 chr3 46342635 Intergenic 7 2823 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.79 LEAD_SNP rs6441961 chr3 46352384 Intergenic 4 ASSOCIATION 18311140 Celiac disease 6.52287874528 CCR3 - CCR2 FUNCTIONAL_SNP rs7372094 chr3 46346271 Intergenic 5a 6113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6441962 chr3 46352759 Intergenic 5b 375 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2157057 chr3 46366269 Intergenic 6 13885 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10865940 chr3 46350367 Intergenic 6 2017 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7374654 chr3 46345787 Intergenic 7 6597 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9856098 chr3 46349905 Intergenic 7 2479 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11130089 chr3 46350358 Intergenic 7 2026 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6441975 chr3 46428190 Intron 6 ASSOCIATION 21502085 AIDS progression 5.30102999566 CCR5 - CCRL2 FUNCTIONAL_SNP rs1015164 chr3 46451680 Intron 6 23490 CEU:1.0;1.0, CHB:1.0;0.789, JPT:1.0;0.85, YRI:1.0;0.792 LEAD_SNP rs1015164 chr3 46451680 Intron 6 ASSOCIATION 21502085 AIDS progression 5.04575749056 CCRL2 - LTF FUNCTIONAL_SNP rs6441975 chr3 46428190 Intron 6 23490 CEU:1.0;1.0, CHB:1.0;0.789, JPT:1.0;0.85, YRI:1.0;0.792 LEAD_SNP rs9876781 chr3 48487338 Intron 6 ASSOCIATION 20834067 Longevity 6.0 ATRIP FUNCTIONAL_SNP rs9883927 chr3 48463711 Intron 2b 23627 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2290822 chr3 48473204 Intergenic 4 14134 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11130171 chr3 48462461 Intron 5b 24877 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7636044 chr3 48484560 Intron 5b 2778 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9849509 chr3 48483432 Intron 5b 3906 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2242150 chr3 48505964 Intron 5b 18626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6794875 chr3 48455626 Intron 5b 31712 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.861 FUNCTIONAL_SNP rs13076076 chr3 48479039 Intron 6 8299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7617480 chr3 49210732 Intron 2b ASSOCIATION 21102462 Menarche (age at onset) 7.52287874528 KLHDC8B FUNCTIONAL_SNP rs13084037 chr3 49214066 Intergenic 4 3334 CEU:1.0;0.939 FUNCTIONAL_SNP rs9831648 chr3 49214303 Intergenic 5b 3571 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11720657 chr3 49392620 Intergenic 6 181888 CEU:0.944;0.803 LEAD_SNP rs9858542 chr3 49701983 Coding 5b ASSOCIATION 19915572 Ulcerative colitis 8.15490195999 BSN ASSOCIATION 17554300 Crohn's disease 7.39794000867 BSN ASSOCIATION 17554261 Crohn's disease 7.30102999566 BSN FUNCTIONAL_SNP rs13085791 chr3 49721798 Coding 7 19815 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;0.77 FUNCTIONAL_SNP rs3197999 chr3 49721532 Coding 7 19549 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;0.695, YRI:1.0;1.0 FUNCTIONAL_SNP rs1801143 chr3 49570200 Coding 6 131783 CEU:1.0;1.0, CHB:1.0;0.55, JPT:1.0;0.601, YRI:0.938;0.567 FUNCTIONAL_SNP rs1131095 chr3 49714225 Coding 5b 12242 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;0.899 FUNCTIONAL_SNP rs34762726 chr3 49689210 Coding 5b 12773 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;0.774 FUNCTIONAL_SNP rs11709525 chr3 49690496 Coding 5b 11487 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;0.813 FUNCTIONAL_SNP rs4625 chr3 49572140 Exon,non-coding 5b 129843 CEU:1.0;1.0, CHB:1.0;0.55, JPT:1.0;0.601, YRI:0.938;0.567 FUNCTIONAL_SNP rs9823546 chr3 49705512 Exon,non-coding 5b 3529 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6766131 chr3 49538932 Intron 4 163051 CEU:1.0;1.0, CHB:1.0;0.55, JPT:1.0;0.601, YRI:0.938;0.567 FUNCTIONAL_SNP rs11130213 chr3 49712297 Intron 4 10314 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs3811697 chr3 49590770 Intron 4 111213 CEU:1.0;1.0, CHB:1.0;0.55, JPT:1.0;0.601, YRI:0.938;0.567 FUNCTIONAL_SNP rs9822268 chr3 49719729 Intron 5b 17746 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.601, YRI:1.0;0.813 FUNCTIONAL_SNP rs6803222 chr3 49665976 Intron 5b 36007 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;0.899 FUNCTIONAL_SNP rs4283605 chr3 49678651 Intron 5b 23332 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;0.813 FUNCTIONAL_SNP rs6770670 chr3 49686682 Intron 5b 15301 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;0.813 FUNCTIONAL_SNP rs11718165 chr3 49696797 Intron 5b 5186 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9882740 chr3 49702484 Intron 5b 501 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;1.0 FUNCTIONAL_SNP rs7622302 chr3 49547561 Intron 6 154422 CEU:1.0;1.0, CHB:1.0;0.55, JPT:1.0;0.601, YRI:0.943;0.759 FUNCTIONAL_SNP rs9827708 chr3 49649989 Intron 6 51994 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;0.813 FUNCTIONAL_SNP rs9811982 chr3 49624377 Intron 7 77606 CEU:1.0;1.0 FUNCTIONAL_SNP rs1873625 chr3 49666964 Intron 7 35019 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;1.0 FUNCTIONAL_SNP rs9837341 chr3 49664767 Intron 7 37216 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;0.899 FUNCTIONAL_SNP rs9875617 chr3 49634696 Intron 7 67287 CEU:1.0;1.0, CHB:1.0;0.55, JPT:1.0;0.601, YRI:0.941;0.686 FUNCTIONAL_SNP rs9858280 chr3 49597737 Intron 7 104246 CEU:1.0;1.0, CHB:1.0;0.55, JPT:1.0;0.601, YRI:0.938;0.567 FUNCTIONAL_SNP rs9812791 chr3 49682311 Intron 7 19672 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;0.854 FUNCTIONAL_SNP rs9827021 chr3 49514764 Intron 7 187219 CEU:1.0;1.0, CHB:1.0;0.55, JPT:1.0;0.601, YRI:0.938;0.567 FUNCTIONAL_SNP rs2172252 chr3 49678307 Intron 7 23676 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;1.0 FUNCTIONAL_SNP rs9858213 chr3 49731861 Intron 7 29878 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.79 FUNCTIONAL_SNP rs9837027 chr3 49597013 Intron 7 104970 CEU:1.0;1.0, CHB:1.0;0.55, JPT:1.0;0.601, YRI:0.938;0.567 FUNCTIONAL_SNP rs9853683 chr3 49512588 Intron 7 189395 CEU:1.0;1.0, CHB:1.0;0.55, JPT:1.0;0.601, YRI:0.941;0.686 FUNCTIONAL_SNP rs7633271 chr3 49555963 Intron 7 146020 CEU:1.0;1.0, CHB:1.0;0.549, JPT:1.0;0.601, YRI:0.939;0.677 LEAD_SNP rs9822268 chr3 49719729 Intron 5b ASSOCIATION 21297633 Ulcerative colitis 16.6989700043 APEH FUNCTIONAL_SNP rs13085791 chr3 49721798 Coding 7 2069 CEU:1.0;1.0, CHB:1.0;0.789, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs3197999 chr3 49721532 Coding 7 1803 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.863, YRI:1.0;0.813 FUNCTIONAL_SNP rs1801143 chr3 49570200 Coding 6 149529 CEU:1.0;1.0, JPT:0.86;0.74, YRI:0.895;0.635 FUNCTIONAL_SNP rs1131095 chr3 49714225 Coding 5b 5504 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;0.904 FUNCTIONAL_SNP rs34762726 chr3 49689210 Coding 5b 30519 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;0.953 FUNCTIONAL_SNP rs9858542 chr3 49701983 Coding 5b 17746 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.601, YRI:1.0;0.813 FUNCTIONAL_SNP rs11709525 chr3 49690496 Coding 5b 29233 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs4625 chr3 49572140 Exon,non-coding 5b 147589 CEU:1.0;1.0, JPT:0.86;0.74, YRI:0.895;0.635 FUNCTIONAL_SNP rs9823546 chr3 49705512 Exon,non-coding 5b 14217 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.601, YRI:1.0;0.839 FUNCTIONAL_SNP rs6766131 chr3 49538932 Intron 4 180797 CEU:1.0;1.0, JPT:0.86;0.74, YRI:0.895;0.635 FUNCTIONAL_SNP rs11130213 chr3 49712297 Intron 4 7432 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.601, YRI:1.0;0.904 FUNCTIONAL_SNP rs3811697 chr3 49590770 Intron 4 128959 CEU:1.0;1.0, CHB:1.0;0.602, JPT:0.86;0.74, YRI:0.895;0.635 FUNCTIONAL_SNP rs6803222 chr3 49665976 Intron 5b 53753 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;0.904 FUNCTIONAL_SNP rs4283605 chr3 49678651 Intron 5b 41078 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs6770670 chr3 49686682 Intron 5b 33047 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs11718165 chr3 49696797 Intron 5b 22932 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.601, YRI:1.0;0.813 FUNCTIONAL_SNP rs9882740 chr3 49702484 Intron 5b 17245 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;0.813 FUNCTIONAL_SNP rs7622302 chr3 49547561 Intron 6 172168 CEU:1.0;1.0, JPT:0.86;0.74, YRI:0.795;0.601 FUNCTIONAL_SNP rs9827708 chr3 49649989 Intron 6 69740 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs9811982 chr3 49624377 Intron 7 95352 CEU:1.0;1.0 FUNCTIONAL_SNP rs9837341 chr3 49664767 Intron 7 54962 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;0.904 FUNCTIONAL_SNP rs9875617 chr3 49634696 Intron 7 85033 CEU:1.0;1.0, JPT:0.86;0.74, YRI:0.85;0.689 FUNCTIONAL_SNP rs1873625 chr3 49666964 Intron 7 52765 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;0.813 FUNCTIONAL_SNP rs9858280 chr3 49597737 Intron 7 121992 CEU:1.0;1.0, JPT:0.86;0.74, YRI:0.895;0.635 FUNCTIONAL_SNP rs9812791 chr3 49682311 Intron 7 37418 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;0.951 FUNCTIONAL_SNP rs2172252 chr3 49678307 Intron 7 41422 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864, YRI:1.0;0.813 FUNCTIONAL_SNP rs9858213 chr3 49731861 Intron 7 12132 CEU:1.0;0.89, CHB:1.0;0.79, JPT:1.0;0.601, YRI:1.0;0.642 FUNCTIONAL_SNP rs9837027 chr3 49597013 Intron 7 122716 CEU:1.0;1.0, JPT:0.86;0.74, YRI:0.895;0.635 FUNCTIONAL_SNP rs7633271 chr3 49555963 Intron 7 163766 CEU:1.0;1.0, JPT:0.86;0.74, YRI:0.845;0.68 LEAD_SNP rs3197999 chr3 49721532 Coding 7 ASSOCIATION 21151127 Primary sclerosing cholangitis 16.0 MST1 ASSOCIATION 21102463 Crohn's disease 16.2218487496 MST1 ASSOCIATION 20228799 Ulcerative colitis 8.39794000867 MST1 ASSOCIATION 18587394 Crohn's disease 12.0 MST1 FUNCTIONAL_SNP rs13085791 chr3 49721798 Coding 7 266 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.77 FUNCTIONAL_SNP rs1801143 chr3 49570200 Coding 6 151332 CEU:1.0;0.946, CHB:1.0;0.551, JPT:1.0;0.863, YRI:0.938;0.567 FUNCTIONAL_SNP rs1131095 chr3 49714225 Coding 5b 7307 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs34762726 chr3 49689210 Coding 5b 32322 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.774 FUNCTIONAL_SNP rs9858542 chr3 49701983 Coding 5b 19549 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;0.695, YRI:1.0;1.0 FUNCTIONAL_SNP rs11709525 chr3 49690496 Coding 5b 31036 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs4625 chr3 49572140 Exon,non-coding 5b 149392 CEU:1.0;0.946, CHB:1.0;0.551, JPT:1.0;0.863, YRI:0.938;0.567 FUNCTIONAL_SNP rs9823546 chr3 49705512 Exon,non-coding 5b 16020 CEU:1.0;0.934, CHB:1.0;1.0, JPT:1.0;0.695, YRI:1.0;1.0 FUNCTIONAL_SNP rs6766131 chr3 49538932 Intron 4 182600 CEU:1.0;0.946, CHB:1.0;0.551, JPT:1.0;0.863, YRI:0.938;0.567 FUNCTIONAL_SNP rs11130213 chr3 49712297 Intron 4 9235 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;0.695, YRI:1.0;0.899 FUNCTIONAL_SNP rs3811697 chr3 49590770 Intron 4 130762 CEU:1.0;0.946, JPT:1.0;0.863, YRI:0.938;0.567 FUNCTIONAL_SNP rs6770670 chr3 49686682 Intron 5b 34850 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs6803222 chr3 49665976 Intron 5b 55556 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs4283605 chr3 49678651 Intron 5b 42881 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs9822268 chr3 49719729 Intron 5b 1803 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.863, YRI:1.0;0.813 FUNCTIONAL_SNP rs11718165 chr3 49696797 Intron 5b 24735 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;0.695, YRI:1.0;1.0 FUNCTIONAL_SNP rs9882740 chr3 49702484 Intron 5b 19048 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7622302 chr3 49547561 Intron 6 173971 CEU:1.0;0.946, CHB:1.0;0.551, JPT:1.0;0.863, YRI:0.943;0.759 FUNCTIONAL_SNP rs9827708 chr3 49649989 Intron 6 71543 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs9811982 chr3 49624377 Intron 7 97155 CEU:1.0;0.946 FUNCTIONAL_SNP rs1873625 chr3 49666964 Intron 7 54568 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9837341 chr3 49664767 Intron 7 56765 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs9875617 chr3 49634696 Intron 7 86836 CEU:1.0;0.946, CHB:1.0;0.551, JPT:1.0;0.863, YRI:0.941;0.686 FUNCTIONAL_SNP rs9858280 chr3 49597737 Intron 7 123795 CEU:1.0;0.946, CHB:1.0;0.551, JPT:1.0;0.863, YRI:0.938;0.567 FUNCTIONAL_SNP rs9812791 chr3 49682311 Intron 7 39221 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs2172252 chr3 49678307 Intron 7 43225 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9858213 chr3 49731861 Intron 7 10329 CEU:1.0;0.841, CHB:1.0;1.0, JPT:1.0;0.695, YRI:1.0;0.79 FUNCTIONAL_SNP rs9837027 chr3 49597013 Intron 7 124519 CEU:1.0;0.946, CHB:1.0;0.551, JPT:1.0;0.863, YRI:0.938;0.567 FUNCTIONAL_SNP rs7633271 chr3 49555963 Intron 7 165569 CEU:1.0;0.946, CHB:1.0;0.549, JPT:1.0;0.863, YRI:0.939;0.677 LEAD_SNP rs6762477 chr3 50093209 Intron 6 ASSOCIATION 21102462 Menarche (age at onset) 7.69897000434 RBM6 FUNCTIONAL_SNP rs868891 chr3 49949071 Coding 5b 144138 CEU:0.955;0.874, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1061474 chr3 50144951 Coding 5b 51742 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;0.897, YRI:1.0;1.0 FUNCTIONAL_SNP rs1138536 chr3 50153356 Coding 6 60147 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;0.897, YRI:1.0;1.0 FUNCTIONAL_SNP rs7061 chr3 50114515 Coding 6 21306 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3796386 chr3 49899795 Coding 5b 193414 CEU:0.955;0.874, CHB:1.0;0.779, JPT:1.0;1.0 FUNCTIONAL_SNP rs2624826 chr3 50155468 Exon,non-coding 6 62259 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;0.897, YRI:1.0;1.0 FUNCTIONAL_SNP rs7615206 chr3 49937505 Intron 4 155704 CEU:0.954;0.872, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2247510 chr3 50126215 Intergenic 4 33006 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs2352984 chr3 49948728 Intron 4 144481 CEU:0.955;0.874, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs2883059 chr3 49902160 Intron 4 191049 CEU:0.955;0.874, CHB:1.0;0.779, JPT:1.0;1.0 FUNCTIONAL_SNP rs6774354 chr3 49961780 Intron 5a 131429 CEU:0.955;0.874, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs11712056 chr3 49914397 Intergenic 5b 178812 CEU:0.955;0.874, CHB:1.0;0.779, JPT:1.0;1.0 FUNCTIONAL_SNP rs7627864 chr3 49926613 Intron 5b 166596 CEU:0.951;0.864, CHB:1.0;0.876, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2526747 chr3 50082914 Intron 5b 10295 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs952594 chr3 49908023 Intergenic 5b 185186 CEU:0.955;0.874, CHB:1.0;0.779, JPT:1.0;1.0 FUNCTIONAL_SNP rs3774759 chr3 49939120 Intron 5b 154089 CEU:0.955;0.874, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2856237 chr3 50158774 Intron 5b 65565 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;0.897 FUNCTIONAL_SNP rs2856238 chr3 50158191 Intron 5b 64982 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;0.897 FUNCTIONAL_SNP rs17657688 chr3 50033228 Intron 6 59981 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs11709573 chr3 49956628 Intron 6 136581 CEU:0.955;0.874, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12634780 chr3 50043341 Intron 6 49868 CEU:0.953;0.869, CHB:1.0;0.845, JPT:1.0;1.0 FUNCTIONAL_SNP rs2624819 chr3 50010571 Intron 6 82638 CEU:1.0;0.914, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs2624822 chr3 50107219 Intron 6 14010 CEU:1.0;0.954, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs7430334 chr3 50078221 Intron 7 14988 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs3774734 chr3 50108792 Intron 7 15583 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17657664 chr3 50032008 Intron 7 61201 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs6793528 chr3 50100188 Intron 7 6979 CEU:1.0;0.916, CHB:1.0;0.876, JPT:1.0;1.0 FUNCTIONAL_SNP rs4688753 chr3 50074773 Intron 7 18436 CEU:1.0;0.912, CHB:1.0;0.877, JPT:1.0;1.0 LEAD_SNP rs11130248 chr3 50352200 Intergenic 6 ASSOCIATION 20711176 Keloid 6.30102999566 HYAL1 - HYAL2 LEAD_SNP rs6784615 chr3 52506426 Intron 5b ASSOCIATION 20935629 Waist-hip ratio 9.39794000867 NISCH FUNCTIONAL_SNP rs1541495 chr3 52492707 Coding 5b 13719 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs613519 chr3 52468940 Exon,non-coding 5b 37486 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs758803 chr3 52515533 Exon,non-coding 5b 9107 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs9863753 chr3 52529899 Intron 2b 23473 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2215466 chr3 52489074 Intergenic 2b 17352 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs758800 chr3 52529266 Intergenic 4 22840 CEU:1.0;0.825 FUNCTIONAL_SNP rs6810027 chr3 52524574 Intron 4 18148 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs4312651 chr3 52506282 Intron 4 144 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs728408 chr3 52517206 Intron 4 10780 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4687619 chr3 52518786 Intron 5b 12360 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs4687618 chr3 52513940 Intron 5b 7514 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs9867823 chr3 52513027 Intron 5b 6601 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs6445486 chr3 52506491 Intron 5b 65 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs7620015 chr3 52510697 Intron 5b 4271 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10865972 chr3 52491447 Intron 5b 14979 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9846089 chr3 52529773 Intron 5b 23347 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs11721286 chr3 52509029 Intron 5b 2603 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3774409 chr3 52496229 Intron 5b 10197 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs887514 chr3 52522659 Intron 5b 16233 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6445506 chr3 52528292 Intergenic 5b 21866 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9855470 chr3 52493275 Intron 5b 13151 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs2109559 chr3 52512318 Intron 5b 5892 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4687614 chr3 52492085 Intron 5b 14341 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs2109558 chr3 52501616 Intron 6 4810 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4687617 chr3 52509277 Intron 7 2851 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs409803 chr3 52443280 Intron 7 63146 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs1011064 chr3 52504503 Intron 7 1923 CEU:1.0;0.825, JPT:1.0;1.0 FUNCTIONAL_SNP rs1011062 chr3 52506903 Intron 7 477 CEU:1.0;0.825, JPT:1.0;1.0 LEAD_SNP rs2251219 chr3 52584787 Coding 6 ASSOCIATION 20081856 Major mood disorders 8.69897000434 PBRM1 FUNCTIONAL_SNP rs2289247 chr3 52727257 Coding 5b 142470 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3755806 chr3 52643685 Coding 5b 58898 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17264436 chr3 52610651 Coding 6 25864 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6976 chr3 52728804 Coding 3a 144017 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.807 FUNCTIONAL_SNP rs11177 chr3 52721305 Coding 4 136518 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs6617 chr3 52740182 Coding 4 155395 CEU:0.955;0.912, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8906 chr3 52739520 Exon,non-coding 4 154733 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.807 FUNCTIONAL_SNP rs1866268 chr3 52719398 Intron 2b 134611 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3733041 chr3 52731598 Intron 2b 146811 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11130317 chr3 52731483 Intron 2b 146696 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13063160 chr3 52602274 Intron 2b 17487 CEU:1.0;0.957, CHB:1.0;0.953, JPT:1.0;0.953 FUNCTIONAL_SNP rs6798246 chr3 52599922 Intron 3a 15135 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs767418 chr3 52767427 Intron 3a 182640 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2164885 chr3 52731269 Intron 4 146482 CEU:0.955;0.912, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs33967311 chr3 52683864 Intron 4 99077 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs35526119 chr3 52749334 Intron 4 164547 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7622694 chr3 52663882 Intron 5a 79095 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12635140 chr3 52738165 Intron 5b 153378 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11714565 chr3 52606292 Intron 5b 21505 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3755798 chr3 52741160 Intron 5b 156373 CEU:1.0;0.957, CHB:1.0;0.955, JPT:1.0;1.0 FUNCTIONAL_SNP rs11716747 chr3 52748857 Intron 5b 164070 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2336542 chr3 52710636 Intron 5b 125849 CEU:1.0;1.0 FUNCTIONAL_SNP rs10865973 chr3 52718154 Intron 5b 133367 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2083180 chr3 52668119 Intron 5b 83332 CEU:0.952;0.827, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2268027 chr3 52766606 Intron 5b 181819 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs2336146 chr3 52626646 Intron 5b 41859 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3774365 chr3 52642487 Intron 5b 57700 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11711421 chr3 52561779 Intron 5b 23008 CEU:1.0;0.802, CHB:1.0;0.792, JPT:1.0;0.953 FUNCTIONAL_SNP rs1961958 chr3 52585990 Intron 5b 1203 CEU:1.0;0.956, CHB:1.0;0.955, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7624716 chr3 52751534 Intron 6 166747 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13079063 chr3 52744460 Intergenic 6 159673 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs3733039 chr3 52719088 Intron 6 134301 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11720243 chr3 52618018 Intron 6 33231 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3733045 chr3 52643307 Intron 6 58520 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17052256 chr3 52593119 Intron 6 8332 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12488461 chr3 52698417 Intron 6 113630 CEU:1.0;0.953, CHB:1.0;0.955, JPT:1.0;0.907, YRI:1.0;1.0 FUNCTIONAL_SNP rs13082208 chr3 52781539 Intron 6 196752 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.651 FUNCTIONAL_SNP rs2289249 chr3 52597664 Intron 6 12877 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;0.953, YRI:0.85;0.628 FUNCTIONAL_SNP rs2289250 chr3 52682946 Intron 6 98159 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17052259 chr3 52593138 Intron 6 8351 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs34017441 chr3 52742413 Intergenic 6 157626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.601 FUNCTIONAL_SNP rs2878628 chr3 52584715 Intron 6 72 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2159644 chr3 52774530 Intron 6 189743 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6804145 chr3 52694198 Intron 6 109411 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2028216 chr3 52680823 Intron 6 96036 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2079929 chr3 52765646 Intron 6 180859 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4687548 chr3 52666650 Intron 6 81863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs13085895 chr3 52678270 Intron 6 93483 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1561337 chr3 52659963 Intron 6 75176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12496634 chr3 52709259 Intron 6 124472 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4687629 chr3 52615227 Intron 6 30440 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12487445 chr3 52618319 Intron 6 33532 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4687638 chr3 52651966 Intron 6 67179 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3852066 chr3 52621839 Intron 6 37052 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13068293 chr3 52672167 Intron 6 87380 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10865974 chr3 52718280 Intron 6 133493 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11720159 chr3 52617802 Intron 6 33015 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.938 FUNCTIONAL_SNP rs6762813 chr3 52726695 Intron 6 141908 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs2072390 chr3 52780509 Intron 6 195722 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7611731 chr3 52692721 Intron 6 107934 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7652191 chr3 52610415 Intron 6 25628 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6786919 chr3 52599789 Intron 6 15002 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs11714419 chr3 52628816 Intron 6 44029 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.807 FUNCTIONAL_SNP rs2268026 chr3 52778347 Intron 6 193560 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs13064064 chr3 52657002 Intron 6 72215 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3796353 chr3 52593230 Intron 6 8443 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10780035 chr3 52764624 Intron 6 179837 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs2118540 chr3 52629386 Intron 6 44599 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;0.95, YRI:0.859;0.689 FUNCTIONAL_SNP rs2336149 chr3 52692124 Intron 6 107337 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3774366 chr3 52641255 Intron 6 56468 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11130310 chr3 52674667 Intron 6 89880 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;0.907 FUNCTIONAL_SNP rs11130312 chr3 52675055 Intron 6 90268 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11130315 chr3 52697163 Intron 6 112376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11130323 chr3 52770277 Intron 6 185490 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs13085775 chr3 52678370 Intron 6 93583 CEU:1.0;0.802, CHB:1.0;0.907, JPT:1.0;0.909 FUNCTIONAL_SNP rs6778844 chr3 52596398 Intron 6 11611 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6445534 chr3 52743384 Intergenic 6 158597 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs6445535 chr3 52771468 Intron 6 186681 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1961959 chr3 52585760 Intron 6 973 CEU:1.0;0.956, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs12487591 chr3 52642936 Intron 6 58149 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6805156 chr3 52609362 Intron 6 24575 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6786043 chr3 52604861 Intron 6 20074 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6803012 chr3 52707026 Intron 7 122239 CEU:1.0;0.951 LEAD_SNP rs1042779 chr3 52821011 Coding 6 ASSOCIATION 19416921 Bipolar disorder 6.69897000434 ITIH1 FUNCTIONAL_SNP rs1075653 chr3 52825528 Intron 5b 4517 CEU:0.901;0.811, CHB:0.951;0.862, JPT:0.952;0.906, YRI:1.0;0.964 FUNCTIONAL_SNP rs2071506 chr3 52826276 Intergenic 5b 5265 CEU:0.901;0.811, CHB:0.904;0.817, JPT:0.952;0.906, YRI:0.963;0.928 LEAD_SNP rs2336725 chr3 53118739 Intergenic 2b ASSOCIATION 20881960 Height 12.0 LOC100287762 FUNCTIONAL_SNP rs11242 chr3 53125922 Coding 6 7183 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1078968 chr3 53123486 Exon,non-coding 5b 4747 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2564921 chr3 53125585 Exon,non-coding 6 6846 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs891368 chr3 53123273 Exon,non-coding 6 4534 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2564940 chr3 53107569 Intergenic 2b 11170 CEU:1.0;1.0, CHB:1.0;0.891, JPT:1.0;0.818, YRI:1.0;1.0 FUNCTIONAL_SNP rs2336723 chr3 53106047 Intergenic 4 12692 CEU:1.0;1.0, CHB:1.0;0.891, JPT:1.0;0.818 FUNCTIONAL_SNP rs2581799 chr3 53108776 Intergenic 5b 9963 CEU:1.0;0.821, CHB:1.0;0.891, JPT:1.0;0.818 FUNCTIONAL_SNP rs2253796 chr3 53120098 Intergenic 5b 1359 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2581786 chr3 53126143 Intron 6 7404 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4687701 chr3 53121276 Intergenic 6 2537 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2163167 chr3 53131772 Intron 6 13033 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.938 FUNCTIONAL_SNP rs2253685 chr3 53119703 Intergenic 6 964 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4687718 chr3 53282303 Intron 5b ASSOCIATION 21076409 Ventricular conduction 8.22184874962 TKT LEAD_SNP rs358806 chr3 55313400 Intergenic 6 ASSOCIATION 17554300 Type 2 diabetes 5.52287874528 LRTM1 - WNT5A LEAD_SNP rs1795648 chr3 55571760 Intron 5b ASSOCIATION 21057379 Bipolar disorder and schizophrenia 5.22184874962 ERC2 FUNCTIONAL_SNP rs1184846 chr3 55577710 Intron 5b 5950 CEU:1.0;0.951 FUNCTIONAL_SNP rs1696241 chr3 55572157 Intron 6 397 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.642 FUNCTIONAL_SNP rs11130477 chr3 55571517 Intron 7 243 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.53 FUNCTIONAL_SNP rs1167242 chr3 55575785 Intron 7 4025 CEU:1.0;0.957, CHB:1.0;0.707, JPT:1.0;0.792 FUNCTIONAL_SNP rs966127 chr3 55576068 Intron 7 4308 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1795631 chr3 55578722 Intron 7 6962 CEU:1.0;1.0, CHB:1.0;0.635, JPT:1.0;0.781 FUNCTIONAL_SNP rs1186007 chr3 55580021 Intron 7 8261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2054989 chr3 56530709 Intergenic 3a ASSOCIATION 17903296 Hip geometry 6.22184874962 C3orf51 - CCDC66 FUNCTIONAL_SNP rs6797413 chr3 56529117 Intergenic 3a 1592 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6784555 chr3 56527268 Intergenic 7 3441 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.826 LEAD_SNP rs9835332 chr3 56667682 Coding 7 ASSOCIATION 20881960 Height 12.3010299957 C3orf63 FUNCTIONAL_SNP rs7637449 chr3 56628031 Coding 5a 39651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs958755 chr3 56716922 Coding 2a 49240 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6445814 chr3 56727885 Intergenic 4 60203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2317252 chr3 56687708 Intron 5a 20026 CEU:1.0;1.0 FUNCTIONAL_SNP rs4681933 chr3 56660229 Intron 5a 7453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4681994 chr3 56715363 Intron 5b 47681 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4234393 chr3 56684520 Intron 6 16838 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6809499 chr3 56687093 Intron 6 19411 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7619465 chr3 56695060 Intron 6 27378 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9833926 chr3 56650178 Intron 6 17504 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.896, YRI:1.0;1.0 FUNCTIONAL_SNP rs17235670 chr3 56593388 Intron 6 74294 CEU:1.0;0.963, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9875257 chr3 56681848 Intron 6 14166 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4681945 chr3 56672608 Intron 6 4926 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs282522 chr3 56629678 Intron 7 38004 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2317134 chr3 56648363 Intron 7 19319 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12485738 chr3 56865776 Intron 5a ASSOCIATION 19820697 Mean platelet volume 30.2218487496 ARHGEF3 ASSOCIATION 19110211 Mean platelet volume 26.3979400087 ARHGEF3 LEAD_SNP rs2062583 chr3 56966246 Intron 5b ASSOCIATION 21452313 Rheumatoid arthritis 5.69897000434 ARHGEF3 ASSOCIATION 21452313 Rheumatoid arthritis 5.69897000434 ARHGEF3 LEAD_SNP rs6445975 chr3 58370177 Intron 5b ASSOCIATION 18204446 Systemic lupus erythematosus 8.15490195999 PXK FUNCTIONAL_SNP rs11130633 chr3 58370792 Intron 6 615 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7631010 chr3 58446010 Intergenic 7 75833 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;0.843 LEAD_SNP rs13315591 chr3 58556841 Intron 5a ASSOCIATION 20453842 Rheumatoid arthritis 7.30102999566 FAM107A FUNCTIONAL_SNP rs9813011 chr3 58555895 Intron 7 946 CEU:1.0;1.0, YRI:1.0;0.738 LEAD_SNP rs1825630 chr3 59902801 Intron 7 ASSOCIATION 21223598 Aortic root size 5.09691001301 FHIT LEAD_SNP rs10510837 chr3 60289842 Intron 5b ASSOCIATION 21182207 Asperger disorder 5.39794000867 FHIT FUNCTIONAL_SNP rs17400084 chr3 60286386 Intron 7 3456 CEU:1.0;0.862, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6791644 chr3 60771108 Intron 5b ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.09691001301 FHIT LEAD_SNP rs10514718 chr3 61413814 Intergenic 7 ASSOCIATION 20125088 Major depressive disorder 5.39794000867 FHIT - PTPRG FUNCTIONAL_SNP rs4688540 chr3 61408148 Intergenic 6 5666 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs652889 chr3 61794054 Intron 6 ASSOCIATION 20031603 QT interval 6.09691001301 PTPRG FUNCTIONAL_SNP rs596873 chr3 61798066 Intron 6 4012 CEU:1.0;1.0, CHB:1.0;0.594 FUNCTIONAL_SNP rs636636 chr3 61792133 Intron 7 1921 CEU:1.0;1.0, CHB:1.0;0.594, YRI:1.0;0.888 LEAD_SNP rs10490775 chr3 62036724 Intron 6 ASSOCIATION 20825314 Fuchs's corneal dystrophy 6.0 PTPRG FUNCTIONAL_SNP rs7640737 chr3 62033353 Intron 6 3371 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs153734 chr3 64078009 Intron 7 ASSOCIATION 19303062 Folate pathway vitamin levels 5.15490195999 PSMD6 - PRICKLE2 LEAD_SNP rs6795735 chr3 64705365 Intron 6 ASSOCIATION 20935629 Waist-hip ratio 15.6989700043 ADAMTS9 - MAGI1 FUNCTIONAL_SNP rs17727064 chr3 64714182 Intron 5b 8817 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs6775974 chr3 64724632 Intron 6 19267 CEU:1.0;1.0, CHB:0.929;0.863, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs7428936 chr3 64710850 Intron 6 5485 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6445425 chr3 64719091 Intron 6 13726 CEU:1.0;1.0, CHB:0.929;0.863, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs918466 chr3 64710253 Intron 7 4888 CEU:1.0;0.961, YRI:1.0;1.0 FUNCTIONAL_SNP rs9311910 chr3 64707269 Intron 7 1904 CEU:1.0;0.961, YRI:1.0;1.0 FUNCTIONAL_SNP rs4611812 chr3 64699445 Intron 7 5920 CEU:1.0;1.0, CHB:0.924;0.853, JPT:1.0;1.0 FUNCTIONAL_SNP rs13096392 chr3 64722611 Intron 7 17246 CEU:1.0;0.961, CHB:0.927;0.802, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs17676309 chr3 64730121 Intron 7 24756 CEU:1.0;1.0, CHB:0.927;0.802, JPT:1.0;0.85, YRI:1.0;0.9 LEAD_SNP rs4607103 chr3 64711904 Intron 6 ASSOCIATION 18372903 Type 2 diabetes 8.0 ADAMTS9 - MAGI1 LEAD_SNP rs2242285 chr3 66431602 Intron 7 ASSOCIATION 21076409 Ventricular conduction 8.0 LRIG1 FUNCTIONAL_SNP rs900171 chr3 66433676 Coding 7 2074 CEU:1.0;0.917, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs1809444 chr3 66433176 Intron 5b 1574 CEU:1.0;0.917, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs900172 chr3 66433312 Intron 5b 1710 CEU:1.0;0.957, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs231276 chr3 66427885 Intron 6 3717 CEU:1.0;0.957, CHB:0.92;0.785, JPT:1.0;0.797 FUNCTIONAL_SNP rs13071458 chr3 66426241 Intron 7 5361 CEU:1.0;0.842, CHB:0.926;0.857, JPT:1.0;0.933, YRI:1.0;0.697 LEAD_SNP rs11709625 chr3 66823157 Intergenic 7 ASSOCIATION 20139978 Hematological and biochemical traits 9.69897000434 RPL21P41 - KBTBD8 FUNCTIONAL_SNP rs13069000 chr3 66798950 Intergenic 4 24207 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs13069049 chr3 66809942 Intergenic 7 13215 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs6549397 chr3 66819779 Intergenic 7 3378 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs13086066 chr3 66809645 Intergenic 7 13512 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 LEAD_SNP rs6806528 chr3 69252899 Intron 4 ASSOCIATION 20190752 Celiac disease 6.69897000434 FRMD4B FUNCTIONAL_SNP rs9868056 chr3 69249770 Exon,non-coding 4 3129 CEU:1.0;0.828, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6784841 chr3 69253632 Intron 2a 733 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6781505 chr3 69252824 Intron 2b 75 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6776027 chr3 69253455 Intron 2b 556 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4075188 chr3 69254120 Intron 5a 1221 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6772387 chr3 69252261 Intron 7 638 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4376041 chr3 69252443 Intron 7 456 CEU:1.0;1.0 FUNCTIONAL_SNP rs7640502 chr3 69264796 Intron 7 11897 CEU:0.898;0.806, JPT:1.0;1.0, YRI:1.0;0.651 LEAD_SNP rs922948 chr3 69442637 Intron 7 ASSOCIATION 17903296 Hip geometry 5.69897000434 FRMD4B - MITF FUNCTIONAL_SNP rs922949 chr3 69435431 Intron 4 7206 CEU:1.0;0.916, CHB:1.0;0.948, JPT:1.0;1.0, YRI:0.963;0.862 FUNCTIONAL_SNP rs4855312 chr3 69463211 Intron 5a 20574 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.922 FUNCTIONAL_SNP rs1967034 chr3 69444935 Intron 5b 2298 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs986203 chr3 69437580 Intron 5b 5057 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.86 FUNCTIONAL_SNP rs9829137 chr3 69455621 Intron 5b 12984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2012720 chr3 69434111 Intron 6 8526 CEU:1.0;0.916, CHB:1.0;0.948, JPT:1.0;1.0, YRI:0.963;0.862 FUNCTIONAL_SNP rs2019003 chr3 69432436 Intron 6 10201 CEU:1.0;0.914, CHB:1.0;0.948, JPT:1.0;1.0, YRI:0.96;0.825 FUNCTIONAL_SNP rs9880450 chr3 69455216 Intron 7 12579 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4855311 chr3 69456914 Intron 7 14277 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs9846189 chr3 69459393 Intron 7 16756 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs10865650 chr3 69432699 Intron 7 9938 CEU:1.0;0.913, CHB:1.0;0.945, JPT:1.0;1.0, YRI:0.959;0.885 LEAD_SNP rs7647307 chr3 69623188 Intergenic 7 ASSOCIATION 20100581 Brain imaging 0 - FUNCTIONAL_SNP rs6549239 chr3 69621052 Intergenic 6 2136 CEU:1.0;0.922 FUNCTIONAL_SNP rs1121758 chr3 69621800 Intergenic 6 1388 CEU:1.0;1.0, CHB:1.0;0.763, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs1121760 chr3 69621525 Intergenic 6 1663 CEU:1.0;0.962, CHB:1.0;0.763, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs4855416 chr3 69620828 Intergenic 6 2360 CEU:1.0;0.962, CHB:1.0;0.763, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs748178 chr3 69627853 Intergenic 7 4665 CEU:1.0;1.0, CHB:1.0;0.763, JPT:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs9874350 chr3 69619780 Intron 7 3408 CEU:1.0;0.962, CHB:1.0;0.763, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs7625737 chr3 69623076 Intergenic 7 112 CEU:1.0;1.0, CHB:1.0;0.763, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs92481 chr3 69628268 Intergenic 7 5080 CEU:1.0;1.0, CHB:1.0;0.763, JPT:1.0;0.944, YRI:1.0;0.534 FUNCTIONAL_SNP rs736333 chr3 69627921 Intergenic 7 4733 CEU:1.0;1.0, CHB:1.0;0.763, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs1498858 chr3 69631756 Intergenic 7 8568 CEU:1.0;0.889, YRI:1.0;1.0 FUNCTIONAL_SNP rs1603835 chr3 69621882 Intergenic 7 1306 CEU:1.0;1.0, CHB:1.0;0.763, JPT:1.0;0.944, YRI:1.0;1.0 LEAD_SNP rs1024889 chr3 70463330 Intergenic 7 ASSOCIATION 19851299 Body mass index 5.22184874962 UQCRHP4 - FOXP1 FUNCTIONAL_SNP rs9842991 chr3 70471368 Intergenic 6 8038 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.776 FUNCTIONAL_SNP rs9869621 chr3 70509353 Intergenic 6 46023 CEU:1.0;1.0, JPT:1.0;1.0, YRI:0.763;0.503 FUNCTIONAL_SNP rs9830728 chr3 70509265 Intergenic 6 45935 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.685 FUNCTIONAL_SNP rs1019374 chr3 70469776 Intergenic 6 6446 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17733513 chr3 70517584 Intergenic 7 54254 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13088843 chr3 70522420 Intergenic 7 59090 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2320798 chr3 70469807 Intergenic 7 6477 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.776 FUNCTIONAL_SNP rs9836839 chr3 70493879 Intergenic 7 30549 CEU:1.0;0.949, JPT:1.0;1.0, YRI:0.92;0.683 FUNCTIONAL_SNP rs34415025 chr3 70536179 Intergenic 7 72849 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4473522 chr3 70522121 Intergenic 7 58791 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10470583 chr3 70460905 Intergenic 7 2425 CEU:1.0;0.947, JPT:1.0;1.0, YRI:0.735;0.541 FUNCTIONAL_SNP rs9869635 chr3 70509374 Intergenic 7 46044 CEU:1.0;1.0, JPT:1.0;1.0, YRI:0.904;0.633 FUNCTIONAL_SNP rs7640389 chr3 70502047 Intergenic 7 38717 CEU:1.0;1.0, JPT:1.0;1.0, YRI:0.811;0.6 FUNCTIONAL_SNP rs12491347 chr3 70529152 Intergenic 7 65822 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9849957 chr3 70493809 Intergenic 7 30479 CEU:1.0;1.0, JPT:1.0;1.0, YRI:0.92;0.683 FUNCTIONAL_SNP rs12492260 chr3 70521524 Intergenic 7 58194 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs717669 chr3 70508727 Intergenic 7 45397 CEU:1.0;1.0, JPT:1.0;1.0, YRI:0.763;0.503 FUNCTIONAL_SNP rs13101134 chr3 70517990 Intergenic 7 54660 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4353776 chr3 70528794 Intergenic 7 65464 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13091195 chr3 70470308 Intergenic 7 6978 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13085816 chr3 70509857 Intergenic 7 46527 CEU:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs17651978 chr3 71020490 Intron 6 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.22184874962 FOXP1 LEAD_SNP rs9863706 chr3 72437413 Intron 4 ASSOCIATION 20881960 Height 12.3979400087 RYBP FUNCTIONAL_SNP rs12956 chr3 72424471 Exon,non-coding 4 12942 CEU:1.0;1.0, CHB:0.938;0.786, JPT:0.927;0.801, YRI:0.927;0.665 FUNCTIONAL_SNP rs11128265 chr3 72455797 Intron 3a 18384 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.933 FUNCTIONAL_SNP rs4677156 chr3 72417857 Intergenic 5b 19556 CEU:1.0;0.94, JPT:1.0;0.553 FUNCTIONAL_SNP rs10511023 chr3 72455447 Intron 5b 18034 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0 FUNCTIONAL_SNP rs12330322 chr3 72455355 Intron 5b 17942 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0 FUNCTIONAL_SNP rs17675336 chr3 72415298 Intergenic 6 22115 CEU:0.94;0.883 LEAD_SNP rs11128347 chr3 73619561 Intron 7 ASSOCIATION 21546767 Dialysis-related mortality 6.22184874962 PDZRN3 LEAD_SNP rs9836484 chr3 78044689 Intergenic 7 ASSOCIATION 19023125 Brain imaging in schizophrenia (interaction) 5.39794000867 ROBO2 - MRPS17P3 LEAD_SNP rs9831754 chr3 78353591 Intergenic 7 ASSOCIATION 20705733 Serum calcium 5.09691001301 ROBO2 - MRPS17P3 FUNCTIONAL_SNP rs9842838 chr3 78387904 Intergenic 6 34313 CEU:1.0;1.0, CHB:0.953;0.908, JPT:0.85;0.723 FUNCTIONAL_SNP rs9823412 chr3 78457646 Intergenic 6 104055 CEU:0.94;0.883 FUNCTIONAL_SNP rs6774325 chr3 78458727 Intergenic 6 105136 CEU:0.94;0.883 FUNCTIONAL_SNP rs9817660 chr3 78426373 Intergenic 6 72782 CEU:1.0;0.942, JPT:0.732;0.511 FUNCTIONAL_SNP rs6548554 chr3 78423185 Intergenic 6 69594 CEU:1.0;0.942, JPT:0.732;0.511 FUNCTIONAL_SNP rs2089934 chr3 78382448 Intergenic 6 28857 CEU:1.0;1.0, CHB:0.951;0.863, JPT:0.847;0.717 FUNCTIONAL_SNP rs7647185 chr3 78468807 Intergenic 6 115216 CEU:0.94;0.883 FUNCTIONAL_SNP rs2314196 chr3 78411050 Intergenic 6 57459 CEU:1.0;1.0, CHB:0.876;0.549, JPT:0.84;0.641 FUNCTIONAL_SNP rs9837024 chr3 78451637 Intergenic 6 98046 CEU:0.94;0.883 FUNCTIONAL_SNP rs1512476 chr3 78434219 Intergenic 7 80628 CEU:1.0;0.831, JPT:0.78;0.608 FUNCTIONAL_SNP rs9840031 chr3 78396140 Intergenic 7 42549 CEU:1.0;1.0, CHB:0.953;0.908, JPT:0.85;0.723 FUNCTIONAL_SNP rs1512492 chr3 78471190 Intergenic 7 117599 CEU:0.94;0.883 FUNCTIONAL_SNP rs2872626 chr3 78435049 Intergenic 7 81458 CEU:1.0;0.935, JPT:0.732;0.511 FUNCTIONAL_SNP rs7621811 chr3 78388816 Intergenic 7 35225 CEU:1.0;1.0, CHB:0.953;0.908, JPT:0.85;0.723 FUNCTIONAL_SNP rs1028024 chr3 78371577 Intergenic 7 17986 CEU:1.0;1.0, CHB:1.0;0.954, JPT:0.944;0.736, YRI:1.0;1.0 FUNCTIONAL_SNP rs4680929 chr3 78387591 Intergenic 7 34000 CEU:1.0;1.0, CHB:0.953;0.908, JPT:0.847;0.717 FUNCTIONAL_SNP rs12714468 chr3 78445878 Intergenic 7 92287 CEU:1.0;0.94, CHB:0.806;0.504 FUNCTIONAL_SNP rs9836909 chr3 78451594 Intergenic 7 98003 CEU:0.937;0.878, CHB:0.765;0.528 FUNCTIONAL_SNP rs9824624 chr3 78407182 Intergenic 7 53591 CEU:1.0;1.0, CHB:0.947;0.779, JPT:0.84;0.641 FUNCTIONAL_SNP rs9869812 chr3 78385679 Intergenic 7 32088 CEU:1.0;1.0, CHB:0.952;0.906, JPT:0.844;0.679 FUNCTIONAL_SNP rs9882111 chr3 78470746 Intergenic 7 117155 CEU:0.928;0.861 LEAD_SNP rs9834373 chr3 78498997 Intergenic 7 ASSOCIATION 18464913 Protein quantitative trait loci 5.39794000867 ROBO2 - MRPS17P3 LEAD_SNP rs10511089 chr3 84481068 Intergenic 7 ASSOCIATION 20171287 Brain structure 6.15490195999 CYP51P1 - CADM2 FUNCTIONAL_SNP rs12635233 chr3 84353501 Intergenic 4 127567 CEU:1.0;0.801, CHB:0.915;0.675, JPT:0.933;0.769 FUNCTIONAL_SNP rs9818767 chr3 84572545 Intergenic 6 91477 CEU:1.0;0.899, CHB:0.923;0.661, JPT:1.0;1.0 FUNCTIONAL_SNP rs9859859 chr3 84619254 Intergenic 6 138186 CEU:1.0;0.879, CHB:0.81;0.603, JPT:1.0;0.801 FUNCTIONAL_SNP rs12486566 chr3 84472077 Intergenic 6 8991 CEU:1.0;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4856255 chr3 84560784 Intergenic 6 79716 CEU:1.0;0.899, CHB:0.923;0.661, JPT:1.0;1.0 FUNCTIONAL_SNP rs12629186 chr3 84623711 Intergenic 6 142643 CEU:1.0;0.899, CHB:0.923;0.661, JPT:1.0;1.0 FUNCTIONAL_SNP rs12634468 chr3 84644618 Intergenic 6 163550 CEU:1.0;0.899, CHB:0.923;0.661, JPT:1.0;1.0 FUNCTIONAL_SNP rs11914641 chr3 84345811 Intergenic 6 135257 CEU:1.0;0.801, CHB:0.908;0.614, JPT:1.0;0.816 FUNCTIONAL_SNP rs9854990 chr3 84554772 Intergenic 7 73704 CEU:1.0;0.899, CHB:0.909;0.618, JPT:1.0;1.0 FUNCTIONAL_SNP rs12496792 chr3 84551596 Intergenic 7 70528 CEU:1.0;0.899, CHB:0.922;0.658, JPT:1.0;1.0 FUNCTIONAL_SNP rs9872666 chr3 84630305 Intergenic 7 149237 CEU:1.0;0.899, CHB:0.923;0.661, JPT:1.0;1.0 FUNCTIONAL_SNP rs11127839 chr3 84405762 Intergenic 7 75306 CEU:1.0;0.801, CHB:1.0;0.936, JPT:1.0;0.941 FUNCTIONAL_SNP rs17021484 chr3 84427645 Intergenic 7 53423 CEU:1.0;0.801, CHB:1.0;0.936, JPT:1.0;1.0 FUNCTIONAL_SNP rs2171056 chr3 84647706 Intergenic 7 166638 CEU:1.0;0.899, CHB:0.923;0.661, JPT:1.0;1.0 FUNCTIONAL_SNP rs17021620 chr3 84655605 Intergenic 7 174537 CEU:1.0;0.899, CHB:0.905;0.605, JPT:1.0;0.938 FUNCTIONAL_SNP rs12493502 chr3 84389942 Intergenic 7 91126 CEU:1.0;0.801, CHB:1.0;0.933, JPT:0.935;0.875 FUNCTIONAL_SNP rs5026375 chr3 84494857 Intergenic 7 13789 CEU:1.0;0.899, CHB:0.907;0.756, JPT:1.0;0.943 FUNCTIONAL_SNP rs17021652 chr3 84678230 Intergenic 7 197162 CEU:1.0;0.899, CHB:0.781;0.57, JPT:1.0;0.943 FUNCTIONAL_SNP rs12491738 chr3 84482914 Intergenic 7 1846 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9823494 chr3 84600086 Intergenic 7 119018 CEU:1.0;0.899, CHB:0.923;0.661, JPT:1.0;1.0 FUNCTIONAL_SNP rs9849331 chr3 84583628 Intergenic 7 102560 CEU:1.0;0.899, CHB:0.923;0.661, JPT:1.0;1.0 FUNCTIONAL_SNP rs17021431 chr3 84344590 Intergenic 7 136478 CEU:1.0;0.801, CHB:0.908;0.614, JPT:0.933;0.769 LEAD_SNP rs13078807 chr3 85884150 Intron 7 ASSOCIATION 20935630 Body mass index 10.3979400087 CADM2 FUNCTIONAL_SNP rs12714640 chr3 85850062 Exon,non-coding 6 34088 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1597213 chr3 85849261 Exon,non-coding 7 34889 CEU:1.0;0.887 FUNCTIONAL_SNP rs7640660 chr3 85850041 Exon,non-coding 7 34109 CEU:1.0;0.887 FUNCTIONAL_SNP rs13098327 chr3 85820181 Intron 5b 63969 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12714637 chr3 85806197 Intron 6 77953 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13078960 chr3 85807590 Intron 6 76560 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9852859 chr3 85842341 Intron 6 41809 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7622475 chr3 85829417 Intron 6 54733 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17355368 chr3 85868671 Intron 6 15479 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9820014 chr3 85828205 Intron 6 55945 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9869320 chr3 85824724 Intron 7 59426 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9818122 chr3 85861064 Intron 7 23086 CEU:1.0;0.887 FUNCTIONAL_SNP rs7640855 chr3 85874164 Intron 7 9986 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1448612 chr3 85875862 Intron 7 8288 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9309990 chr3 85810201 Intron 7 73949 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9309991 chr3 85831963 Intron 7 52187 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9309994 chr3 85899156 Intron 7 15006 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9826482 chr3 85876575 Intron 7 7575 CEU:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs2122042 chr3 85866335 Intron 7 17815 CEU:1.0;0.887 FUNCTIONAL_SNP rs9852478 chr3 85826968 Intron 7 57182 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9852127 chr3 85826736 Intron 7 57414 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11926524 chr3 85860075 Intron 7 24075 CEU:1.0;1.0 FUNCTIONAL_SNP rs13068138 chr3 85809425 Intron 7 74725 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7620339 chr3 85862650 Intron 7 21500 CEU:1.0;0.838 LEAD_SNP rs7642134 chr3 86916882 Intergenic 5b ASSOCIATION 21102462 Menarche (age at onset) 9.39794000867 CADM2 - VGLL3 FUNCTIONAL_SNP rs2875442 chr3 86815552 Intergenic 5a 101330 CEU:0.959;0.92, CHB:1.0;0.753, YRI:1.0;0.732 FUNCTIONAL_SNP rs9827403 chr3 86790149 Intergenic 5b 126733 CEU:1.0;0.812 FUNCTIONAL_SNP rs9310036 chr3 86895642 Intergenic 5b 21240 CEU:1.0;0.883 FUNCTIONAL_SNP rs9310040 chr3 86901096 Intergenic 5b 15786 CEU:1.0;0.829 FUNCTIONAL_SNP rs1437048 chr3 86849502 Intergenic 5b 67380 CEU:1.0;0.96, CHB:1.0;0.748, JPT:1.0;0.53, YRI:1.0;0.725 FUNCTIONAL_SNP rs4855174 chr3 86831752 Intergenic 5b 85130 CEU:0.959;0.92, CHB:1.0;0.753, YRI:0.953;0.691 FUNCTIONAL_SNP rs9842925 chr3 86917446 Intergenic 5b 564 CEU:1.0;0.883 FUNCTIONAL_SNP rs12495229 chr3 86852024 Intergenic 5b 64858 CEU:0.954;0.91 FUNCTIONAL_SNP rs11917335 chr3 86820923 Intergenic 6 95959 CEU:0.959;0.92, CHB:1.0;0.753, YRI:0.8;0.594 FUNCTIONAL_SNP rs9868316 chr3 86927574 Intergenic 6 10692 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9841218 chr3 86902010 Intergenic 6 14872 CEU:1.0;0.856 FUNCTIONAL_SNP rs1370209 chr3 86749427 Intergenic 6 167455 CEU:1.0;0.921, CHB:1.0;0.954, JPT:0.948;0.818 FUNCTIONAL_SNP rs1370212 chr3 86792269 Intergenic 6 124613 CEU:1.0;0.812 FUNCTIONAL_SNP rs7645296 chr3 86808226 Intergenic 6 108656 CEU:1.0;0.847 FUNCTIONAL_SNP rs728179 chr3 86847664 Intergenic 6 69218 CEU:1.0;0.96, CHB:1.0;0.753, JPT:1.0;0.53, YRI:1.0;0.732 FUNCTIONAL_SNP rs6549110 chr3 86752414 Intergenic 6 164468 CEU:1.0;0.812 FUNCTIONAL_SNP rs2083018 chr3 86838465 Intergenic 6 78417 CEU:1.0;0.837 FUNCTIONAL_SNP rs9284811 chr3 86902414 Intergenic 6 14468 CEU:1.0;0.883 FUNCTIONAL_SNP rs9869007 chr3 86928199 Intergenic 6 11317 CEU:1.0;0.883 FUNCTIONAL_SNP rs11718876 chr3 86844152 Intergenic 6 72730 CEU:1.0;0.96, CHB:1.0;0.753, JPT:1.0;0.53, YRI:1.0;0.732 FUNCTIONAL_SNP rs9880801 chr3 86947782 Intergenic 6 30900 CEU:0.956;0.843, CHB:1.0;0.79, JPT:1.0;0.53, YRI:1.0;0.732 FUNCTIONAL_SNP rs9683172 chr3 86883956 Intergenic 6 32926 CEU:1.0;0.883 FUNCTIONAL_SNP rs9758444 chr3 86913737 Intergenic 6 3145 CEU:1.0;0.883 FUNCTIONAL_SNP rs2324786 chr3 86756047 Intergenic 6 160835 CEU:1.0;0.835 FUNCTIONAL_SNP rs11718975 chr3 86782622 Intergenic 6 134260 CEU:1.0;0.812 FUNCTIONAL_SNP rs9310023 chr3 86875458 Intergenic 6 41424 CEU:1.0;0.883 FUNCTIONAL_SNP rs12107081 chr3 86785210 Intergenic 6 131672 CEU:0.95;0.822, CHB:1.0;0.718, YRI:0.952;0.736 FUNCTIONAL_SNP rs9310028 chr3 86880672 Intergenic 6 36210 CEU:1.0;0.883 FUNCTIONAL_SNP rs9310043 chr3 86911330 Intergenic 6 5552 CEU:1.0;0.883 FUNCTIONAL_SNP rs1437050 chr3 86759022 Intergenic 6 157860 CEU:1.0;0.812 FUNCTIONAL_SNP rs6775872 chr3 86781203 Intergenic 6 135679 CEU:1.0;0.802 FUNCTIONAL_SNP rs9841059 chr3 86832535 Intergenic 6 84347 CEU:1.0;0.845 FUNCTIONAL_SNP rs9850360 chr3 86761070 Intergenic 6 155812 CEU:1.0;0.921, CHB:1.0;0.954, JPT:0.948;0.818 FUNCTIONAL_SNP rs9819897 chr3 86867722 Intergenic 6 49160 CEU:1.0;0.96, CHB:1.0;0.753, JPT:1.0;0.53, YRI:1.0;0.732 FUNCTIONAL_SNP rs9755126 chr3 86782863 Intergenic 6 134019 CEU:1.0;0.8 FUNCTIONAL_SNP rs6782806 chr3 86863106 Intergenic 7 53776 CEU:1.0;0.883 FUNCTIONAL_SNP rs9756702 chr3 86890028 Intergenic 7 26854 CEU:1.0;0.883 FUNCTIONAL_SNP rs2118188 chr3 86868436 Intergenic 7 48446 CEU:1.0;0.883 FUNCTIONAL_SNP rs2118191 chr3 86857004 Intergenic 7 59878 CEU:0.956;0.842 FUNCTIONAL_SNP rs9871411 chr3 86778528 Intergenic 7 138354 CEU:1.0;0.812 FUNCTIONAL_SNP rs7628864 chr3 86850618 Intergenic 7 66264 CEU:1.0;0.945, CHB:0.82;0.576 FUNCTIONAL_SNP rs9757252 chr3 86894478 Intergenic 7 22404 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9866309 chr3 86821558 Intergenic 7 95324 CEU:1.0;0.847 FUNCTIONAL_SNP rs12495954 chr3 86852426 Intergenic 7 64456 CEU:0.959;0.92, CHB:0.779;0.55 FUNCTIONAL_SNP rs1370206 chr3 86760103 Intergenic 7 156779 CEU:1.0;0.812 FUNCTIONAL_SNP rs1370208 chr3 86828392 Intergenic 7 88490 CEU:0.959;0.92, CHB:1.0;0.737, YRI:1.0;0.775 FUNCTIONAL_SNP rs6549111 chr3 86752701 Intergenic 7 164181 CEU:1.0;0.812 FUNCTIONAL_SNP rs9869433 chr3 86928277 Intergenic 7 11395 CEU:1.0;0.847 FUNCTIONAL_SNP rs920188 chr3 86822085 Intergenic 7 94797 CEU:0.959;0.92, CHB:1.0;0.753, YRI:1.0;0.732 FUNCTIONAL_SNP rs6796925 chr3 86757306 Intergenic 7 159576 CEU:1.0;0.918, CHB:1.0;0.952, JPT:0.949;0.858 FUNCTIONAL_SNP rs9310038 chr3 86898410 Intergenic 7 18472 CEU:1.0;0.883 FUNCTIONAL_SNP rs11127958 chr3 86825600 Intergenic 7 91282 CEU:1.0;0.847 FUNCTIONAL_SNP rs9682583 chr3 86892316 Intergenic 7 24566 CEU:1.0;0.883 FUNCTIONAL_SNP rs9682971 chr3 86895262 Intergenic 7 21620 CEU:1.0;0.883 FUNCTIONAL_SNP rs12714669 chr3 86894011 Intergenic 7 22871 CEU:1.0;0.883 FUNCTIONAL_SNP rs12714670 chr3 86894030 Intergenic 7 22852 CEU:1.0;0.883 FUNCTIONAL_SNP rs9682104 chr3 86877811 Intergenic 7 39071 CEU:1.0;0.883 FUNCTIONAL_SNP rs9868477 chr3 86752191 Intergenic 7 164691 CEU:1.0;0.828 FUNCTIONAL_SNP rs9284807 chr3 86888516 Intergenic 7 28366 CEU:1.0;0.883 FUNCTIONAL_SNP rs9284808 chr3 86893161 Intergenic 7 23721 CEU:1.0;0.883 FUNCTIONAL_SNP rs9284809 chr3 86893370 Intergenic 7 23512 CEU:1.0;0.883 FUNCTIONAL_SNP rs9682134 chr3 86913288 Intergenic 7 3594 CEU:1.0;0.883 FUNCTIONAL_SNP rs9683166 chr3 86874663 Intergenic 7 42219 CEU:1.0;0.883 FUNCTIONAL_SNP rs9713389 chr3 86896165 Intergenic 7 20717 CEU:1.0;0.828 FUNCTIONAL_SNP rs1437053 chr3 86758861 Intergenic 7 158021 CEU:1.0;0.812 FUNCTIONAL_SNP rs13093618 chr3 86925437 Intergenic 7 8555 CEU:1.0;0.883 FUNCTIONAL_SNP rs9713432 chr3 86894818 Intergenic 7 22064 CEU:1.0;0.878 FUNCTIONAL_SNP rs9756444 chr3 86788639 Intergenic 7 128243 CEU:1.0;0.804 FUNCTIONAL_SNP rs9631517 chr3 86840636 Intergenic 7 76246 CEU:1.0;0.883 FUNCTIONAL_SNP rs9818400 chr3 86850131 Intergenic 7 66751 CEU:0.959;0.92, CHB:0.789;0.567 FUNCTIONAL_SNP rs9868090 chr3 86927593 Intergenic 7 10711 CEU:1.0;0.883 FUNCTIONAL_SNP rs9681220 chr3 86874511 Intergenic 7 42371 CEU:1.0;0.88 FUNCTIONAL_SNP rs9310022 chr3 86873149 Intergenic 7 43733 CEU:1.0;0.883 FUNCTIONAL_SNP rs11919691 chr3 86782582 Intergenic 7 134300 CEU:0.958;0.88, CHB:1.0;0.708, YRI:0.954;0.694 FUNCTIONAL_SNP rs6779214 chr3 86832039 Intergenic 7 84843 CEU:0.959;0.92, CHB:1.0;0.753, YRI:0.869;0.623 FUNCTIONAL_SNP rs9310037 chr3 86895701 Intergenic 7 21181 CEU:1.0;0.883 FUNCTIONAL_SNP rs9310042 chr3 86906208 Intergenic 7 10674 CEU:1.0;0.883 FUNCTIONAL_SNP rs721246 chr3 86828334 Intergenic 7 88548 CEU:1.0;0.847 FUNCTIONAL_SNP rs4530527 chr3 86800085 Intergenic 7 116797 CEU:1.0;0.812 FUNCTIONAL_SNP rs1437049 chr3 86846778 Intergenic 7 70104 CEU:0.959;0.92, CHB:0.789;0.567 FUNCTIONAL_SNP rs1437051 chr3 86758995 Intergenic 7 157887 CEU:1.0;0.812 FUNCTIONAL_SNP rs1437055 chr3 86831077 Intergenic 7 85805 CEU:0.958;0.881, YRI:0.855;0.615 FUNCTIONAL_SNP rs1982153 chr3 86796801 Intergenic 7 120081 CEU:0.955;0.806, YRI:0.954;0.694 FUNCTIONAL_SNP rs11127961 chr3 86898025 Intergenic 7 18857 CEU:1.0;0.867 FUNCTIONAL_SNP rs9874330 chr3 86811276 Intergenic 7 105606 CEU:0.958;0.919, CHB:1.0;0.747, YRI:1.0;0.732 FUNCTIONAL_SNP rs9864625 chr3 86856794 Intergenic 7 60088 CEU:1.0;0.883 FUNCTIONAL_SNP rs13097914 chr3 86955074 Intergenic 7 38192 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs7644095 chr3 86936450 Intergenic 7 19568 CEU:0.956;0.843, CHB:1.0;0.79, JPT:1.0;0.53, YRI:1.0;0.732 FUNCTIONAL_SNP rs5007299 chr3 86760197 Intergenic 7 156685 CEU:1.0;0.812 FUNCTIONAL_SNP rs6784456 chr3 86955570 Intergenic 7 38688 CEU:1.0;0.876, YRI:1.0;0.956 FUNCTIONAL_SNP rs9681881 chr3 86907857 Intergenic 7 9025 CEU:1.0;0.883 FUNCTIONAL_SNP rs1583578 chr3 86853485 Intergenic 7 63397 CEU:1.0;0.88 FUNCTIONAL_SNP rs3927011 chr3 86830683 Intergenic 7 86199 CEU:0.955;0.806 FUNCTIONAL_SNP rs9985323 chr3 86745568 Intergenic 7 171314 CEU:1.0;0.812 FUNCTIONAL_SNP rs9831416 chr3 86928244 Intergenic 7 11362 CEU:1.0;0.883 FUNCTIONAL_SNP rs9833108 chr3 86835307 Intergenic 7 81575 CEU:1.0;0.847 LEAD_SNP rs2660753 chr3 87110674 Intergenic 7 ASSOCIATION 18264097 Prostate cancer 7.52287874528 VGLL3 - CHMP2B FUNCTIONAL_SNP rs1865866 chr3 87119543 Intergenic 5b 8869 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1436642 chr3 87118806 Intergenic 7 8132 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9284813 chr3 87152169 Intergenic 6 ASSOCIATION 20676098 Prostate cancer 8.30102999566 VGLL3 - CHMP2B FUNCTIONAL_SNP rs12636460 chr3 87151870 Intergenic 7 299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9310048 chr3 87152681 Intergenic 7 512 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17181170 chr3 87173324 Intergenic 7 ASSOCIATION 19767753 Prostate cancer 7.52287874528 VGLL3 - CHMP2B FUNCTIONAL_SNP rs4527381 chr3 87221370 Intergenic 3a 48046 CEU:0.958;0.816, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.653 FUNCTIONAL_SNP rs1844097 chr3 87200635 Intergenic 7 27311 CEU:1.0;0.821, CHB:1.0;0.893, JPT:1.0;0.853 FUNCTIONAL_SNP rs17023964 chr3 87185759 Intergenic 7 12435 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.653 LEAD_SNP rs7629490 chr3 87241497 Intergenic 6 ASSOCIATION 21743057 Prostate cancer 7.0 VGLL3 - CHMP2B LEAD_SNP rs2880961 chr3 88524175 Intergenic 6 ASSOCIATION 21177773 Response to acetaminophen (hepatotoxicity) 6.69897000434 C3orf38 - EPHA3 FUNCTIONAL_SNP rs33966381 chr3 88512622 Intergenic 6 11553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs10511137 chr3 88512202 Intergenic 6 11973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs12496833 chr3 88500022 Intergenic 6 24153 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0 FUNCTIONAL_SNP rs6809413 chr3 88512449 Intergenic 6 11726 CEU:1.0;0.953 FUNCTIONAL_SNP rs13095969 chr3 88503722 Intergenic 6 20453 CEU:1.0;0.947, JPT:1.0;0.573 FUNCTIONAL_SNP rs12491625 chr3 88523676 Intergenic 6 499 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13101122 chr3 88507849 Intergenic 7 16326 CEU:1.0;0.954, JPT:1.0;0.577 FUNCTIONAL_SNP rs17559005 chr3 88512539 Intergenic 7 11636 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs1982562 chr3 88508367 Intergenic 7 15808 CEU:1.0;0.954, JPT:1.0;0.577 FUNCTIONAL_SNP rs13096171 chr3 88503839 Intergenic 7 20336 CEU:1.0;0.951, JPT:1.0;0.577 FUNCTIONAL_SNP rs2344954 chr3 88533734 Intergenic 7 9559 CEU:1.0;0.953, JPT:1.0;0.566 LEAD_SNP rs9814870 chr3 95688843 Intergenic 6 ASSOCIATION 19478329 Male infertility 6.15490195999 RPS18P6 - RPL18AP8 FUNCTIONAL_SNP rs6768797 chr3 95687876 Intergenic 6 967 CEU:1.0;0.855, JPT:1.0;0.51, YRI:1.0;0.511 FUNCTIONAL_SNP rs9871481 chr3 95704580 Intergenic 6 15737 CEU:1.0;0.927, CHB:0.845;0.664, JPT:0.826;0.55 FUNCTIONAL_SNP rs2312318 chr3 95686335 Intergenic 7 2508 CEU:1.0;0.93, CHB:1.0;0.871, JPT:1.0;0.617 LEAD_SNP rs4390941 chr3 95795276 Intergenic 7 ASSOCIATION 20595579 Longevity 6.52287874528 RPS18P6 - RPL18AP8 ASSOCIATION 20595579 Longevity 6.52287874528 RPS18P6 - RPL18AP8 FUNCTIONAL_SNP rs4393926 chr3 95784872 Intergenic 6 10404 CEU:1.0;1.0, CHB:0.837;0.609, JPT:0.88;0.665, YRI:0.831;0.616 FUNCTIONAL_SNP rs12107096 chr3 95823523 Intergenic 7 28247 CEU:1.0;0.918, CHB:0.868;0.518 LEAD_SNP rs1497546 chr3 98034526 Intron 7 ASSOCIATION 19483685 Drug-induced liver injury (flucloxacillin) 6.69897000434 OR5H8P - OR5K4 FUNCTIONAL_SNP rs7640176 chr3 98011176 Intron 7 23350 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2670321 chr3 99167107 Intergenic 5b ASSOCIATION 20031603 RR interval (heart rate) 5.69897000434 DCBLD2 - COL8A1 FUNCTIONAL_SNP rs2700645 chr3 99159460 Intergenic 5b 7647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs2670322 chr3 99167401 Intergenic 6 294 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2670331 chr3 99160633 Intergenic 6 6474 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs2700650 chr3 99158618 Intergenic 6 8489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2700656 chr3 99157832 Intergenic 6 9275 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs2246020 chr3 99180244 Intergenic 6 13137 CEU:1.0;0.961, CHB:1.0;0.86, JPT:1.0;0.743, YRI:1.0;0.848 FUNCTIONAL_SNP rs2458516 chr3 99161582 Intergenic 6 5525 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2464149 chr3 99157687 Intergenic 6 9420 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;0.861 FUNCTIONAL_SNP rs2246151 chr3 99179308 Intergenic 7 12201 CEU:1.0;0.96, CHB:1.0;0.86, JPT:1.0;0.743, YRI:1.0;0.843 FUNCTIONAL_SNP rs2700652 chr3 99168238 Intergenic 7 1131 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6440606 chr3 99153006 Intergenic 7 14101 CEU:1.0;0.959, CHB:0.945;0.893, JPT:0.948;0.899 FUNCTIONAL_SNP rs2670323 chr3 99168893 Intergenic 7 1786 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2670338 chr3 99162536 Intergenic 7 4571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs2670340 chr3 99162713 Intergenic 7 4394 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2670346 chr3 99163961 Intergenic 7 3146 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2951497 chr3 99166634 Intergenic 7 473 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2951498 chr3 99166060 Intergenic 7 1047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2700632 chr3 99160577 Intergenic 7 6530 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2700633 chr3 99160551 Intergenic 7 6556 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2942828 chr3 99169691 Intergenic 7 2584 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2700662 chr3 99175428 Intergenic 7 8321 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.838 LEAD_SNP rs13070584 chr3 99266337 Intergenic 7 ASSOCIATION 20686651 Chronic kidney disease and serum creatinine levels 5.69897000434 DCBLD2 - COL8A1 FUNCTIONAL_SNP rs13098261 chr3 99266760 Intergenic 7 423 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs13095226 chr3 99396272 Intron 6 ASSOCIATION 20385826 Age-related macular degeneration 5.52287874528 COL8A1 FUNCTIONAL_SNP rs13059876 chr3 99398156 Exon,non-coding 7 1884 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9883702 chr3 99397141 Exon,non-coding 4 869 CEU:1.0;0.866 FUNCTIONAL_SNP rs13082798 chr3 99393551 Intron 4 2721 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13081022 chr3 99389682 Intron 5b 6590 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1112773 chr3 99409500 Intron 5b 13228 CEU:1.0;0.866 FUNCTIONAL_SNP rs4928140 chr3 99405465 Intron 5b 9193 CEU:1.0;0.866 FUNCTIONAL_SNP rs17777354 chr3 99377220 Intron 5b 19052 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13100157 chr3 99389528 Intron 5b 6744 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6808963 chr3 99404313 Intron 6 8041 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6779634 chr3 99418544 Intron 6 22272 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13067276 chr3 99396324 Intron 7 52 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9859600 chr3 99387903 Intron 7 8369 CEU:1.0;0.866 FUNCTIONAL_SNP rs13089811 chr3 99395906 Intron 7 366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13079203 chr3 99388515 Intron 7 7757 CEU:1.0;0.847, YRI:1.0;0.791 FUNCTIONAL_SNP rs6774706 chr3 99380389 Intron 7 15883 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13066932 chr3 99396153 Intron 7 119 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9848257 chr3 99404989 Intron 7 8717 CEU:1.0;0.866 FUNCTIONAL_SNP rs6797919 chr3 99404025 Intron 7 7753 CEU:1.0;0.866 FUNCTIONAL_SNP rs4535264 chr3 99412954 Intron 7 16682 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs991258 chr3 101774043 Intergenic 7 ASSOCIATION 17903296 Hip geometry 6.30102999566 NFKBIZ - ZPLD1 FUNCTIONAL_SNP rs4683865 chr3 101779653 Intergenic 6 5610 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;0.924 FUNCTIONAL_SNP rs9820800 chr3 101775926 Intergenic 7 1883 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs13072519 chr3 101783305 Intergenic 7 9262 CEU:1.0;0.884, CHB:1.0;0.945, JPT:1.0;0.813, YRI:1.0;0.854 FUNCTIONAL_SNP rs1513119 chr3 101785181 Intergenic 7 11138 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:0.923;0.851 FUNCTIONAL_SNP rs964913 chr3 101782003 Intergenic 7 7960 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;0.924 FUNCTIONAL_SNP rs1319802 chr3 101775433 Intergenic 7 1390 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2063640 chr3 102203045 Intergenic 5b ASSOCIATION 21490949 Type 2 diabetes 5.52287874528 ZPLD1 - TRNAE27P LEAD_SNP rs9657904 chr3 105586714 Intron 5b ASSOCIATION 20453840 Multiple sclerosis 9.69897000434 CBLB FUNCTIONAL_SNP rs6767627 chr3 105560638 Intron 7 26076 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12491921 chr3 106288950 Intergenic 7 ASSOCIATION 21668797 Cannabis dependence 6.0 CBLB - TRNAQ42P LEAD_SNP rs6437740 chr3 107465817 Intron 7 ASSOCIATION 19247474 Smoking behavior 6.69897000434 BBX LEAD_SNP rs769554 chr3 109204413 Intron 7 ASSOCIATION 21348951 Cardiac hypertrophy 5.52287874528 FLJ25363 LEAD_SNP rs13323983 chr3 109927376 Intergenic 7 ASSOCIATION 21507922 Neutrophil count 5.30102999566 PPIAP15 - RPSAP29 LEAD_SNP rs76884941 chr3 111201785 Intron 5a ASSOCIATION 21685187 Chronic obstructive pulmonary disease 7.0 PVRL3 - CD96 LEAD_SNP rs56238310 chr3 111233239 Intron 7 ASSOCIATION 21685187 Chronic obstructive pulmonary disease 7.0 PVRL3 - CD96 LEAD_SNP rs4450776 chr3 111423129 Intron 6 ASSOCIATION 20125193 Cognitive test performance 5.30102999566 PLCXD2 FUNCTIONAL_SNP rs951338 chr3 111433815 Intron 7 10686 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 LEAD_SNP rs1875517 chr3 117307567 Intron 7 ASSOCIATION 17903300 Waist circumference 5.69897000434 BZW1L1 - IGSF11 FUNCTIONAL_SNP rs1910037 chr3 117307988 Intron 6 421 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.856 LEAD_SNP rs6438424 chr3 117574822 Intron 7 ASSOCIATION 21102462 Menarche (age at onset) 13.0 BZW1L1 - IGSF11 FUNCTIONAL_SNP rs6804394 chr3 117592348 Intron 2b 17526 CEU:1.0;1.0, CHB:0.951;0.905, JPT:1.0;1.0 FUNCTIONAL_SNP rs11715566 chr3 117562436 Intron 4 12386 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.744 FUNCTIONAL_SNP rs7433864 chr3 117593483 Intron 5b 18661 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs13090448 chr3 117574367 Intron 5b 455 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.627 FUNCTIONAL_SNP rs10804533 chr3 117555219 Intron 5b 19603 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.951, YRI:1.0;0.912 FUNCTIONAL_SNP rs9790189 chr3 117583647 Intron 6 8825 CEU:0.96;0.922, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10934420 chr3 117552111 Intron 7 22711 CEU:1.0;1.0, CHB:0.951;0.905, JPT:1.0;0.951, YRI:1.0;0.912 FUNCTIONAL_SNP rs6799530 chr3 117516836 Intron 7 57986 CEU:1.0;0.834 FUNCTIONAL_SNP rs13100226 chr3 117590202 Intron 7 15380 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 LEAD_SNP rs11712165 chr3 119118796 Intron 6 ASSOCIATION 20190752 Celiac disease 8.09691001301 ARHGAP31 FUNCTIONAL_SNP rs10511390 chr3 119120577 Intron 4 1781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11715698 chr3 119118497 Intron 7 299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2293370 chr3 119219934 Intron 3a ASSOCIATION 21399635 Primary biliary cirrhosis 10.5228787453 C3orf1 FUNCTIONAL_SNP rs1131265 chr3 119222456 Coding 7 2522 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;1.0 FUNCTIONAL_SNP rs6807043 chr3 119265187 Intron 6 45253 CEU:1.0;0.847, CHB:0.799;0.539 FUNCTIONAL_SNP rs9843355 chr3 119228508 Intron 7 8574 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13092998 chr3 119245044 Intron 7 25110 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6804441 chr3 119260944 Intron 7 41010 CEU:1.0;0.847, CHB:0.806;0.551 FUNCTIONAL_SNP rs2049502 chr3 119254385 Intron 7 34451 CEU:1.0;0.847, CHB:0.806;0.551 LEAD_SNP rs3772130 chr3 121344140 Intron 7 ASSOCIATION 19734545 Cognitive performance 5.22184874962 FBXO40 FUNCTIONAL_SNP rs2070180 chr3 121351338 Coding 5b 7198 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13083794 chr3 121464928 Intron 6 120788 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11719458 chr3 121382005 Intergenic 6 37865 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3772128 chr3 121345094 Intron 6 954 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6791046 chr3 121394707 Intron 7 50567 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17691170 chr3 121357626 Intron 7 13486 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11714406 chr3 121372513 Intron 7 28373 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13072618 chr3 121391833 Intron 7 47693 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17251221 chr3 121993247 Intron 6 ASSOCIATION 20705733 Serum calcium 21.6989700043 CASR FUNCTIONAL_SNP rs1801725 chr3 122003757 Coding 5b 10510 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17265703 chr3 122048644 Intron 6 55397 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5008830 chr3 122030462 Intergenic 6 37215 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2001548 chr3 122032789 Intergenic 7 39542 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1801725 chr3 122003757 Coding 5b ASSOCIATION 20661308 Serum calcium 36.2218487496 CASR FUNCTIONAL_SNP rs16832956 chr3 122017508 Intergenic 5b 13751 CEU:1.0;0.805, JPT:1.0;1.0 FUNCTIONAL_SNP rs17265703 chr3 122048644 Intron 6 44887 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17251221 chr3 121993247 Intron 6 10510 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5008830 chr3 122030462 Intergenic 6 26705 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2001548 chr3 122032789 Intergenic 7 29032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs17265703 chr3 122048644 Intron 6 ASSOCIATION 20558539 Serum phosphorus levels 8.39794000867 CSTA FUNCTIONAL_SNP rs1801725 chr3 122003757 Coding 5b 44887 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17251221 chr3 121993247 Intron 6 55397 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5008830 chr3 122030462 Intergenic 6 18182 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2001548 chr3 122032789 Intergenic 7 15855 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2650951 chr3 122368347 Intergenic 6 ASSOCIATION 20031603 QT interval 6.0 PARP15 - EIF4BP8 FUNCTIONAL_SNP rs2668336 chr3 122384469 Intergenic 3a 16122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs790130 chr3 122384661 Intergenic 5b 16314 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9844986 chr3 122362079 Intergenic 5b 6268 CEU:1.0;0.825 FUNCTIONAL_SNP rs812047 chr3 122382074 Intergenic 6 13727 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs790110 chr3 122384020 Intergenic 7 15673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2668345 chr3 122368628 Intergenic 7 281 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs790101 chr3 122369883 Intergenic 7 1536 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs9868873 chr3 122730910 Intron 7 ASSOCIATION 21642993 Esophageal cancer 7.0 SEMA5B LEAD_SNP rs11708067 chr3 123065778 Intron 4 ASSOCIATION 20081858 Fasting glucose-related traits 11.5228787453 ADCY5 ASSOCIATION 20081858 Fasting glucose-related traits 21.15490196 ADCY5 FUNCTIONAL_SNP rs11717195 chr3 123082398 Intron 7 16620 CEU:0.943;0.841, CHB:1.0;1.0, YRI:1.0;0.784 LEAD_SNP rs2877716 chr3 123094451 Intron 4 ASSOCIATION 20081857 Two-hour glucose challenge 15.15490196 ADCY5 FUNCTIONAL_SNP rs17361324 chr3 123131254 Intron 2b 36803 CEU:0.945;0.805, CHB:1.0;1.0 FUNCTIONAL_SNP rs10934647 chr3 123130684 Intron 5b 36233 CEU:0.945;0.805 FUNCTIONAL_SNP rs2124500 chr3 123093530 Intron 5b 921 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.908 FUNCTIONAL_SNP rs9883204 chr3 123096820 Intron 6 2369 CEU:1.0;0.942, CHB:1.0;1.0, YRI:0.876;0.539 FUNCTIONAL_SNP rs6798189 chr3 123095312 Intron 6 861 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11717195 chr3 123082398 Intron 7 12053 CEU:1.0;0.948, CHB:1.0;1.0 LEAD_SNP rs9883204 chr3 123096820 Intron 6 ASSOCIATION 20372150 Birth weight 14.15490196 ADCY5 FUNCTIONAL_SNP rs17361324 chr3 123131254 Intron 2b 34434 CEU:0.938;0.828, CHB:1.0;1.0 FUNCTIONAL_SNP rs2877716 chr3 123094451 Intron 4 2369 CEU:1.0;0.942, CHB:1.0;1.0, YRI:0.876;0.539 FUNCTIONAL_SNP rs10934647 chr3 123130684 Intron 5b 33864 CEU:0.939;0.831 FUNCTIONAL_SNP rs2124500 chr3 123093530 Intron 5b 3290 CEU:1.0;0.943, CHB:1.0;1.0, YRI:1.0;0.606 FUNCTIONAL_SNP rs6798189 chr3 123095312 Intron 6 1508 CEU:1.0;0.942, CHB:1.0;1.0 FUNCTIONAL_SNP rs11717195 chr3 123082398 Intron 7 14422 CEU:1.0;0.886, CHB:1.0;1.0 LEAD_SNP rs9871760 chr3 126993099 Intergenic 5b ASSOCIATION 21116278 MRI atrophy measures 5.39794000867 C3orf56 - TPRA1 FUNCTIONAL_SNP rs9860652 chr3 126996775 Intergenic 5a 3676 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1994128 chr3 126945750 Intergenic 5b 47349 CEU:1.0;0.832, YRI:0.744;0.554 FUNCTIONAL_SNP rs6439042 chr3 126988568 Intergenic 7 4531 CEU:1.0;0.838, CHB:1.0;0.898, JPT:1.0;0.752, YRI:1.0;0.784 FUNCTIONAL_SNP rs6439043 chr3 126988758 Intergenic 7 4341 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.811 FUNCTIONAL_SNP rs7640734 chr3 126985891 Intergenic 7 7208 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9874810 chr3 126951845 Intergenic 7 41254 CEU:1.0;0.837, YRI:0.742;0.551 LEAD_SNP rs2687729 chr3 127895226 Intron 5b ASSOCIATION 21102462 Menarche (age at onset) 7.0 EEFSEC FUNCTIONAL_SNP rs6770140 chr3 127934329 Intron 2c 39103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs4857837 chr3 127836319 Intron 4 58907 CEU:1.0;1.0, CHB:0.899;0.736, JPT:1.0;1.0, YRI:1.0;0.827 FUNCTIONAL_SNP rs4857836 chr3 127836287 Intron 4 58939 CEU:1.0;1.0, CHB:0.896;0.67, JPT:1.0;1.0, YRI:1.0;0.82 FUNCTIONAL_SNP rs4857873 chr3 127934218 Intron 5a 38992 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2955102 chr3 127865510 Intron 5a 29716 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs2811413 chr3 127991149 Intron 5b 95923 CEU:1.0;0.847 FUNCTIONAL_SNP rs10934853 chr3 128038373 Intron 5b 143147 CEU:1.0;0.847 FUNCTIONAL_SNP rs4857877 chr3 127948060 Intron 5b 52834 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs2811514 chr3 127907929 Intron 5b 12703 CEU:1.0;1.0 FUNCTIONAL_SNP rs4384971 chr3 127934774 Intron 5b 39548 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2811529 chr3 127994160 Intron 5b 98934 CEU:1.0;1.0 FUNCTIONAL_SNP rs4857841 chr3 128046643 Intron 5b 151417 CEU:1.0;0.847 FUNCTIONAL_SNP rs4857872 chr3 127933822 Intron 6 38596 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs883238 chr3 127913263 Intron 6 18037 CEU:1.0;1.0 FUNCTIONAL_SNP rs7641133 chr3 127822320 Intron 6 72906 CEU:1.0;1.0, CHB:0.902;0.813, JPT:1.0;1.0, YRI:1.0;0.827 FUNCTIONAL_SNP rs2811508 chr3 127920023 Intron 6 24797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6439121 chr3 127935461 Intron 6 40235 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs13434079 chr3 127963448 Intron 6 68222 CEU:1.0;1.0 FUNCTIONAL_SNP rs2687720 chr3 127918955 Intron 6 23729 CEU:1.0;1.0 FUNCTIONAL_SNP rs9814834 chr3 127938137 Intron 6 42911 CEU:0.936;0.824, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.916 FUNCTIONAL_SNP rs2492285 chr3 127918000 Intron 6 22774 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6414310 chr3 127856573 Intron 6 38653 CEU:1.0;1.0, CHB:0.902;0.813, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4857871 chr3 127933786 Intron 7 38560 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2811509 chr3 127916551 Intron 7 21325 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.824 FUNCTIONAL_SNP rs2811512 chr3 127911820 Intron 7 16594 CEU:1.0;1.0 FUNCTIONAL_SNP rs2811515 chr3 127905518 Intron 7 10292 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6775988 chr3 127944477 Intron 7 49251 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6439119 chr3 127923187 Intron 7 27961 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6439122 chr3 127940534 Intron 7 45308 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs7374072 chr3 127930866 Intron 7 35640 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs2999052 chr3 127892037 Intron 7 3189 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs872267 chr3 127888067 Intron 7 7159 CEU:1.0;1.0 FUNCTIONAL_SNP rs7372439 chr3 127931402 Intron 7 36176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9845651 chr3 127940353 Intron 7 45127 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs9830294 chr3 127946788 Intron 7 51562 CEU:1.0;1.0 FUNCTIONAL_SNP rs9873786 chr3 127942379 Intron 7 47153 CEU:1.0;1.0 FUNCTIONAL_SNP rs9843281 chr3 127961396 Intron 7 66170 CEU:1.0;1.0 FUNCTIONAL_SNP rs4857838 chr3 127943328 Intron 7 48102 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs10934853 chr3 128038373 Intron 5b ASSOCIATION 19767754 Prostate cancer 9.52287874528 EEFSEC FUNCTIONAL_SNP rs6770140 chr3 127934329 Intron 2c 104044 CEU:1.0;0.847 FUNCTIONAL_SNP rs4857873 chr3 127934218 Intron 5a 104155 CEU:1.0;0.847 FUNCTIONAL_SNP rs2955102 chr3 127865510 Intron 5a 172863 CEU:1.0;0.847 FUNCTIONAL_SNP rs2811529 chr3 127994160 Intron 5b 44213 CEU:1.0;0.847 FUNCTIONAL_SNP rs4857877 chr3 127948060 Intron 5b 90313 CEU:1.0;0.847 FUNCTIONAL_SNP rs2687729 chr3 127895226 Intron 5b 143147 CEU:1.0;0.847 FUNCTIONAL_SNP rs4384971 chr3 127934774 Intron 5b 103599 CEU:1.0;0.847 FUNCTIONAL_SNP rs2811514 chr3 127907929 Intron 5b 130444 CEU:1.0;0.834, YRI:1.0;1.0 FUNCTIONAL_SNP rs4857841 chr3 128046643 Intron 5b 8270 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs883238 chr3 127913263 Intron 6 125110 CEU:1.0;0.847, YRI:1.0;1.0 FUNCTIONAL_SNP rs13434079 chr3 127963448 Intron 6 74925 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs6414310 chr3 127856573 Intron 6 181800 CEU:1.0;0.847 FUNCTIONAL_SNP rs2687720 chr3 127918955 Intron 6 119418 CEU:1.0;0.847, CHB:1.0;0.953, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs2811508 chr3 127920023 Intron 6 118350 CEU:1.0;0.847 FUNCTIONAL_SNP rs2492285 chr3 127918000 Intron 6 120373 CEU:1.0;0.847 FUNCTIONAL_SNP rs2999052 chr3 127892037 Intron 7 146336 CEU:1.0;0.847 FUNCTIONAL_SNP rs9845651 chr3 127940353 Intron 7 98020 CEU:1.0;0.847 FUNCTIONAL_SNP rs9843281 chr3 127961396 Intron 7 76977 CEU:1.0;0.893, CHB:1.0;0.953, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs9830294 chr3 127946788 Intron 7 91585 CEU:1.0;0.847, CHB:1.0;0.953, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs6775988 chr3 127944477 Intron 7 93896 CEU:1.0;0.847 FUNCTIONAL_SNP rs7374072 chr3 127930866 Intron 7 107507 CEU:1.0;0.889 FUNCTIONAL_SNP rs872267 chr3 127888067 Intron 7 150306 CEU:1.0;0.847, CHB:1.0;0.953, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs7372439 chr3 127931402 Intron 7 106971 CEU:1.0;0.847 FUNCTIONAL_SNP rs6439122 chr3 127940534 Intron 7 97839 CEU:1.0;0.847 FUNCTIONAL_SNP rs9873786 chr3 127942379 Intron 7 95994 CEU:1.0;0.847, CHB:1.0;0.953, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs4857871 chr3 127933786 Intron 7 104587 CEU:1.0;0.847 FUNCTIONAL_SNP rs2811509 chr3 127916551 Intron 7 121822 CEU:1.0;0.893 FUNCTIONAL_SNP rs2811512 chr3 127911820 Intron 7 126553 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs2811515 chr3 127905518 Intron 7 132855 CEU:1.0;0.847 FUNCTIONAL_SNP rs4857838 chr3 127943328 Intron 7 95045 CEU:1.0;0.847 LEAD_SNP rs4857855 chr3 128260550 Intergenic 7 ASSOCIATION 19198610 Plasma eosinophil count 16.0457574906 TMED10P2 - C3orf27 FUNCTIONAL_SNP rs4431128 chr3 128251678 Intergenic 4 8872 CEU:1.0;1.0, CHB:0.948;0.899, JPT:1.0;0.937 LEAD_SNP rs4328821 chr3 128316435 Intergenic 5b ASSOCIATION 21738478 White blood cell types 16.5228787453 C3orf27 - RPN1 ASSOCIATION 21738478 White blood cell types 39.3010299957 C3orf27 - RPN1 LEAD_SNP rs6439167 chr3 129050756 Intergenic 7 ASSOCIATION 20881960 Height 14.0457574906 C3orf47 - RPL32P3 FUNCTIONAL_SNP rs10934881 chr3 129043582 Exon,non-coding 7 7174 CEU:1.0;1.0, CHB:1.0;0.846, JPT:0.838;0.606 FUNCTIONAL_SNP rs13095008 chr3 129044900 Exon,non-coding 5b 5856 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs6763292 chr3 129044705 Exon,non-coding 5b 6051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs6790635 chr3 129041882 Intron 5b 8874 CEU:0.935;0.874, CHB:0.842;0.709 FUNCTIONAL_SNP rs6801264 chr3 129045278 Intergenic 5b 5478 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs6439168 chr3 129050943 Intergenic 6 187 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs6765930 chr3 129020778 Intron 7 29978 CEU:1.0;0.939 LEAD_SNP rs6775745 chr3 131813900 Intron 7 ASSOCIATION 21507922 Neutrophil count 6.69897000434 CPNE4 - RPL7P16 FUNCTIONAL_SNP rs9826324 chr3 131827591 Intron 7 13691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.902, YRI:1.0;1.0 LEAD_SNP rs6439371 chr3 132610752 Intergenic 7 ASSOCIATION 21102462 Menarche (age at onset) 8.0 NCRNA00119 - TMEM108 FUNCTIONAL_SNP rs2600959 chr3 132615464 Intergenic 7 4712 CEU:0.954;0.91, CHB:1.0;0.931, JPT:1.0;1.0 LEAD_SNP rs2369955 chr3 132693588 Intergenic 7 ASSOCIATION 21529783 Alcoholism (heaviness of drinking) 5.69897000434 NCRNA00119 - TMEM108 FUNCTIONAL_SNP rs4854671 chr3 132687797 Intergenic 6 5791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11716478 chr3 132684517 Intergenic 6 9071 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17353600 chr3 132695039 Intergenic 7 1451 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11922882 chr3 132696356 Intergenic 7 2768 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10512881 chr3 132694662 Intergenic 7 1074 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10935039 chr3 132696836 Intergenic 7 3248 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2718812 chr3 133399702 Intron 6 ASSOCIATION 19084217 Serum markers of iron status 6.0 TOPBP1 - TFP1 FUNCTIONAL_SNP rs2718811 chr3 133399738 Intron 6 36 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2718815 chr3 133398786 Intron 7 916 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1867504 chr3 133410661 Intron 7 ASSOCIATION 19084217 Serum markers of iron status 5.69897000434 TFP1 FUNCTIONAL_SNP rs2589269 chr3 133409977 Intron 6 684 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs1006098 chr3 133411605 Intron 7 944 CEU:1.0;1.0, CHB:1.0;0.87, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs1867503 chr3 133410648 Intron 7 13 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.951 LEAD_SNP rs1799852 chr3 133475722 Coding 7 ASSOCIATION 19084217 Serum markers of iron status 5.30102999566 TF LEAD_SNP rs1799899 chr3 133475812 Coding 5a ASSOCIATION 21665994 Alcohol consumption 9.0 TF FUNCTIONAL_SNP rs1799852 chr3 133475722 Coding 7 90 CEU:1.0;1.0 LEAD_SNP rs3811647 chr3 133484029 Intron 5b ASSOCIATION 21665994 Alcohol consumption 35.0 TF ASSOCIATION 21208937 Serum iron levels 46.5228787453 TF ASSOCIATION 19084217 Serum markers of iron status 14.5228787453 TF FUNCTIONAL_SNP rs3811658 chr3 133476852 Intron 5a 7177 CEU:0.956;0.877, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs8177272 chr3 133482870 Intron 5a 1159 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1525889 chr3 133490033 Intron 5b 6004 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9843728 chr3 133501407 Intergenic 5b 17378 CEU:1.0;0.959, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs12490148 chr3 133523973 Intron 5b 39944 CEU:0.914;0.836, CHB:0.885;0.707, JPT:0.947;0.813 FUNCTIONAL_SNP rs4854761 chr3 133498789 Intergenic 5b 14760 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1525892 chr3 133484712 Intron 6 683 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.721 FUNCTIONAL_SNP rs7638018 chr3 133495461 Intron 6 11432 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4854762 chr3 133499063 Intergenic 6 15034 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12595 chr3 133496553 Intron 6 12524 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6794945 chr3 133518463 Intron 6 34434 CEU:0.956;0.876, CHB:0.889;0.751, JPT:0.949;0.818 FUNCTIONAL_SNP rs1830084 chr3 133508464 Intron 6 24435 CEU:0.956;0.876, CHB:0.889;0.751, JPT:0.949;0.818 FUNCTIONAL_SNP rs8177240 chr3 133477701 Intron 6 6328 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;0.953 FUNCTIONAL_SNP rs8177253 chr3 133480192 Intron 6 3837 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs8177248 chr3 133479626 Intron 6 4403 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs4854760 chr3 133498741 Intergenic 6 14712 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8177262 chr3 133480652 Intron 6 3377 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8177252 chr3 133480174 Intron 7 3855 CEU:1.0;1.0, CHB:1.0;0.9, JPT:1.0;1.0, YRI:1.0;0.824 LEAD_SNP rs1049296 chr3 133494354 Coding 5a ASSOCIATION 21665994 Alcohol consumption 42.3010299957 TF FUNCTIONAL_SNP rs3811657 chr3 133474607 Intron 5a 19747 CEU:0.928;0.803, CHB:1.0;0.538, JPT:0.925;0.856 FUNCTIONAL_SNP rs8177191 chr3 133468139 Intron 7 26215 CEU:0.928;0.803, CHB:1.0;0.538, JPT:0.925;0.856 LEAD_SNP rs1830084 chr3 133508464 Intron 6 ASSOCIATION 19084217 Serum markers of iron status 9.0 TF - SRPRB FUNCTIONAL_SNP rs12490148 chr3 133523973 Intron 5b 15509 CEU:1.0;0.958, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.924 LEAD_SNP rs1534166 chr3 133537067 Intron 7 ASSOCIATION 21665994 Alcohol consumption 16.6989700043 SRPRB LEAD_SNP rs10935120 chr3 134233092 Intron 6 ASSOCIATION 18391952 Height 7.15490195999 CEP63 FUNCTIONAL_SNP rs1863913 chr3 134200205 Intron 2c 32887 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs1498718 chr3 134205920 Intron 4 27172 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs1357762 chr3 134264859 Intron 5a 31767 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9289476 chr3 134237103 Intron 5b 4011 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4539979 chr3 134287597 Intron 6 54505 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9289478 chr3 134268619 Intron 6 35527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9985356 chr3 134232920 Intron 6 172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9990351 chr3 134239191 Intron 6 6099 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9851441 chr3 134315091 Intergenic 7 81999 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.803 FUNCTIONAL_SNP rs13322305 chr3 134310791 Intergenic 7 77699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs3932818 chr3 134206069 Intron 7 27023 CEU:1.0;0.956, CHB:0.925;0.856, JPT:0.928;0.86, YRI:0.963;0.927 FUNCTIONAL_SNP rs9864346 chr3 134312352 Intergenic 7 79260 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9989967 chr3 134238964 Intron 7 5872 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4955485 chr3 134295843 Intergenic 7 62751 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs2056603 chr3 134312749 Intergenic 7 79657 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6800862 chr3 134228628 Intron 7 4464 CEU:1.0;0.956, CHB:1.0;0.93, JPT:1.0;0.818, YRI:0.96;0.887 LEAD_SNP rs511154 chr3 135950921 Intergenic 7 ASSOCIATION 20031576 Fibrinogen 9.22184874962 RPL31P23 - PCCB FUNCTIONAL_SNP rs610860 chr3 136052816 Exon,non-coding 7 101895 CEU:0.935;0.875 FUNCTIONAL_SNP rs8045 chr3 136055459 Exon,non-coding 5b 104538 CEU:1.0;0.825 FUNCTIONAL_SNP rs576771 chr3 135989292 Intron 4 38371 CEU:1.0;0.825, CHB:1.0;0.699, JPT:1.0;0.805, YRI:1.0;1.0 FUNCTIONAL_SNP rs548288 chr3 135969755 Intron 4 18834 CEU:1.0;0.825, CHB:1.0;0.877, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs687339 chr3 135932359 Intergenic 4 18562 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.855;0.567 FUNCTIONAL_SNP rs1279840 chr3 136006576 Intron 5a 55655 CEU:1.0;0.825, CHB:1.0;0.877, JPT:1.0;0.863, YRI:1.0;0.776 FUNCTIONAL_SNP rs645040 chr3 135926622 Intergenic 5b 24299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.773;0.506 FUNCTIONAL_SNP rs684773 chr3 135956305 Intergenic 5b 5384 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1154988 chr3 135925191 Intergenic 6 25730 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.885;0.727 FUNCTIONAL_SNP rs606725 chr3 135986087 Intron 7 35166 CEU:1.0;0.825, CHB:1.0;0.877, JPT:1.0;0.863, YRI:1.0;0.8 FUNCTIONAL_SNP rs483465 chr3 136047977 Intron 7 97056 CEU:1.0;0.825, CHB:1.0;0.877, JPT:1.0;0.863, YRI:1.0;0.614 FUNCTIONAL_SNP rs4678428 chr3 135988412 Intron 7 37491 CEU:1.0;0.825, CHB:1.0;0.877, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs3821445 chr3 136002809 Intron 7 51888 CEU:1.0;0.936 FUNCTIONAL_SNP rs17252498 chr3 136014198 Intron 7 63277 CEU:1.0;0.877 FUNCTIONAL_SNP rs3755636 chr3 135968828 Intergenic 7 17907 CEU:0.935;0.874, CHB:1.0;0.889, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs1279425 chr3 136006984 Intron 7 56063 CEU:1.0;0.832, CHB:1.0;0.889, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs1711171 chr3 136020541 Intron 7 69620 CEU:1.0;0.825, CHB:1.0;0.877, JPT:1.0;0.863, YRI:1.0;0.555 FUNCTIONAL_SNP rs696517 chr3 136067655 Intron 7 116734 CEU:1.0;0.936, YRI:1.0;0.555 LEAD_SNP rs1382269 chr3 137108482 Intergenic 7 ASSOCIATION 19043545 Serum metabolites 6.30102999566 IL20RB - NPM1P17 LEAD_SNP rs10935268 chr3 137447485 Intergenic 6 ASSOCIATION 19578179 Acenocoumarol maintenance dosage 6.09691001301 NPM1P17 - SOX14 LEAD_SNP rs9846480 chr3 138025396 Intron 6 ASSOCIATION 21116278 MRI atrophy measures 5.09691001301 TXNDC6 FUNCTIONAL_SNP rs9867678 chr3 138029377 Intron 7 3981 CEU:1.0;0.882, CHB:1.0;0.877, JPT:1.0;1.0 LEAD_SNP rs2306374 chr3 138119952 Intron 4 ASSOCIATION 21378990 Coronary heart disease 7.52287874528 MRAS FUNCTIONAL_SNP rs2293251 chr3 138124114 Exon,non-coding 7 4162 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3732837 chr3 138121920 Exon,non-coding 7 1968 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9818870 chr3 138122122 Exon,non-coding 7 2170 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs13324341 chr3 138070901 Intron 5b 49051 CEU:1.0;0.933 FUNCTIONAL_SNP rs9848655 chr3 138108352 Intron 5b 11600 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12695685 chr3 138096097 Intron 6 23855 CEU:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs9864898 chr3 138111751 Intron 6 8201 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2347252 chr3 138095525 Intron 6 24427 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6807945 chr3 138052754 Intergenic 7 67198 CEU:1.0;0.933 FUNCTIONAL_SNP rs1199337 chr3 138088064 Intron 7 31888 CEU:1.0;1.0 FUNCTIONAL_SNP rs1199338 chr3 138087467 Intron 7 32485 CEU:1.0;1.0 LEAD_SNP rs9818870 chr3 138122122 Exon,non-coding 7 ASSOCIATION 19198612 Coronary heart disease 12.15490196 MRAS LEAD_SNP rs1511412 chr3 138713704 Intergenic 5b ASSOCIATION 20711176 Keloid 12.6989700043 C3orf72 - PRR23A LEAD_SNP rs11708189 chr3 140175360 Intron 7 ASSOCIATION 21658281 Sudden cardiac arrest 5.69897000434 CLSTN2 LEAD_SNP rs908821 chr3 140540718 Intergenic 6 ASSOCIATION 19010793 Multiple sclerosis 5.52287874528 TRIM42 - RPL23AP41 LEAD_SNP rs6440003 chr3 141094209 Intergenic 7 ASSOCIATION 18391952 Height 23.6989700043 ZBTB38 FUNCTIONAL_SNP rs6763931 chr3 141102833 Intergenic 5b 8624 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6764769 chr3 141100280 Intergenic 7 6071 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6763931 chr3 141102833 Intergenic 5b ASSOCIATION 19343178 Height 11.5228787453 ZBTB38 ASSOCIATION 18391951 Height 27.0 ZBTB38 FUNCTIONAL_SNP rs6440003 chr3 141094209 Intergenic 7 8624 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6764769 chr3 141100280 Intergenic 7 2553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs724016 chr3 141105570 Exon,non-coding 4 ASSOCIATION 18391950 Height 21.096910013 ZBTB38 ASSOCIATION 18193045 Height 6.0 ZBTB38 LEAD_SNP rs9825379 chr3 141137035 Intron 7 ASSOCIATION 20189936 Height 8.22184874962 ZBTB38 LEAD_SNP rs10513137 chr3 141143430 Intron 7 ASSOCIATION 19893584 Height 7.09691001301 ZBTB38 ASSOCIATION 19396169 Height 11.2218487496 ZBTB38 FUNCTIONAL_SNP rs6776991 chr3 141142391 Intron 7 1039 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs347685 chr3 141807137 Intron 7 ASSOCIATION 20383146 Chronic kidney disease 10.5228787453 RPL19P6 - GK5 FUNCTIONAL_SNP rs9865777 chr3 141766090 Intron 5a 41047 CEU:1.0;0.826, CHB:1.0;0.69, JPT:1.0;0.731 FUNCTIONAL_SNP rs6791514 chr3 141766305 Intron 5a 40832 CEU:1.0;0.944, CHB:1.0;0.846, JPT:1.0;0.887, YRI:1.0;0.555 FUNCTIONAL_SNP rs347686 chr3 141807982 Intron 5b 845 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs6773343 chr3 141825598 Intron 5b 18461 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.833 FUNCTIONAL_SNP rs1397764 chr3 141750810 Intron 7 56327 CEU:1.0;0.945, CHB:1.0;0.798, JPT:1.0;0.887 FUNCTIONAL_SNP rs1355438 chr3 141767853 Intron 7 39284 CEU:1.0;1.0, CHB:1.0;0.841, JPT:1.0;0.887, YRI:1.0;0.87 FUNCTIONAL_SNP rs7644383 chr3 141743951 Intron 7 63186 CEU:1.0;0.945, CHB:1.0;0.751, JPT:1.0;0.887 FUNCTIONAL_SNP rs9877817 chr3 141812759 Intron 7 5622 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:0.954;0.91 FUNCTIONAL_SNP rs6440060 chr3 141762853 Intron 7 44284 CEU:1.0;0.945 FUNCTIONAL_SNP rs2861422 chr3 141724644 Intron 7 82493 CEU:1.0;0.945, CHB:1.0;0.798, JPT:1.0;0.887 LEAD_SNP rs3773506 chr3 142431000 Exon,non-coding 6 ASSOCIATION 21490949 Type 2 diabetes 5.04575749056 PLS1 LEAD_SNP rs894177 chr3 142894411 Intergenic 5b ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.52287874528 CHST2 - PBX2P1 LEAD_SNP rs9810857 chr3 142982899 Intergenic 5b ASSOCIATION 20732626 Attention deficit hyperactivity disorder 5.22184874962 PBX2P1 - SLC9A9 LEAD_SNP rs7632299 chr3 143056467 Intron 5b ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 5.39794000867 SLC9A9 FUNCTIONAL_SNP rs9332458 chr3 143050502 Intron 3a 5965 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10446325 chr3 143068463 Intron 4 11996 CEU:0.944;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10804691 chr3 143062127 Intron 5b 5660 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs7652901 chr3 143064866 Intron 6 8399 CEU:1.0;1.0, CHB:1.0;0.895, JPT:1.0;1.0, YRI:0.963;0.928 FUNCTIONAL_SNP rs1393071 chr3 143049856 Intron 6 6611 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12493355 chr3 143056787 Intron 7 320 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10935489 chr3 143057833 Intron 7 1366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.828 FUNCTIONAL_SNP rs6440163 chr3 143051850 Intron 7 4617 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1371924 chr3 143250070 Intron 5b ASSOCIATION 17903302 Tonometry 5.39794000867 SLC9A9 LEAD_SNP rs2800 chr3 143424822 Intron 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.52287874528 SLC9A9 FUNCTIONAL_SNP rs1900648 chr3 143426519 Intron 5b 1697 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs1900647 chr3 143426284 Intron 6 1462 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs4839655 chr3 143427951 Intron 6 3129 CEU:1.0;0.84, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.529 FUNCTIONAL_SNP rs2801 chr3 143424787 Intron 7 35 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1122452 chr3 143427340 Intron 7 2518 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.8 FUNCTIONAL_SNP rs4240552 chr3 143424849 Intron 7 27 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1562495 chr3 143427549 Intron 7 2727 CEU:1.0;0.84, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.529 LEAD_SNP rs800082 chr3 144340205 Intergenic 7 ASSOCIATION 19247474 Smoking behavior 5.52287874528 C3orf58 - GM2AP1 FUNCTIONAL_SNP rs800084 chr3 144340494 Intergenic 6 289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs345013 chr3 145173788 Intergenic 6 ASSOCIATION 17903305 Prostate cancer 5.30102999566 C3orf58 - GM2AP1 FUNCTIONAL_SNP rs345062 chr3 145107340 Intergenic 5a 66448 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs344979 chr3 145134297 Intergenic 6 39491 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs344988 chr3 145139314 Intergenic 6 34474 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs191501 chr3 145110962 Intergenic 7 62826 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs237665 chr3 145123242 Intergenic 7 50546 CEU:1.0;0.828, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs344982 chr3 145134983 Intergenic 7 38805 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs345006 chr3 145113438 Intergenic 7 60350 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs345040 chr3 145161019 Intergenic 7 12769 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs345048 chr3 145096907 Intergenic 7 76881 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs345054 chr3 145101023 Intergenic 7 72765 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs9818620 chr3 145148957 Intergenic 7 24831 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1841770 chr3 147756686 Intergenic 7 ASSOCIATION 19010793 Multiple sclerosis 5.09691001301 FLJ30375 - RPL38P1 LEAD_SNP rs6798928 chr3 151579873 Intron 7 ASSOCIATION 20694011 Immunoglobulin A 5.52287874528 AADAC - SUCNR1 FUNCTIONAL_SNP rs10804755 chr3 151574286 Intron 4 5587 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9837563 chr3 151562256 Intron 6 17617 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6785504 chr3 152672779 Intergenic 7 ASSOCIATION 21659360 Response to antineoplastic agents 5.15490195999 P2RY1 - RAP2B FUNCTIONAL_SNP rs9817893 chr3 152655157 Intergenic 3a 17622 CEU:1.0;0.961, CHB:0.937;0.604, JPT:0.892;0.689 FUNCTIONAL_SNP rs4680018 chr3 152673145 Intergenic 5a 366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.616 FUNCTIONAL_SNP rs9849602 chr3 152661019 Intergenic 6 11760 CEU:1.0;0.955, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.563 FUNCTIONAL_SNP rs6440833 chr3 152646244 Intergenic 7 26535 CEU:1.0;0.961, CHB:0.937;0.604, JPT:0.842;0.644 FUNCTIONAL_SNP rs9820966 chr3 152654336 Intergenic 7 18443 CEU:1.0;0.96, CHB:0.935;0.596, JPT:0.889;0.682 FUNCTIONAL_SNP rs4599279 chr3 152655953 Intergenic 7 16826 CEU:1.0;0.924, CHB:0.937;0.604, JPT:0.892;0.689 LEAD_SNP rs9883654 chr3 152721975 Intergenic 6 ASSOCIATION 21659360 Response to antineoplastic agents 5.69897000434 P2RY1 - RAP2B FUNCTIONAL_SNP rs9872362 chr3 152716443 Intergenic 7 5532 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4680030 chr3 152718585 Intergenic 7 3390 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs3772255 chr3 156102734 Intron 7 ASSOCIATION 17903295 Aging traits 5.09691001301 KCNAB1 FUNCTIONAL_SNP rs3796166 chr3 156107968 Intron 5b 5234 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3772261 chr3 156111247 Intron 5b 8513 CEU:1.0;0.891, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3755630 chr3 156106273 Intron 5b 3539 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs940050 chr3 156102890 Intron 6 156 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10513487 chr3 156103564 Intron 6 830 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3772253 chr3 156096691 Intron 6 6043 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.91 FUNCTIONAL_SNP rs11926141 chr3 156105173 Intron 6 2439 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7619720 chr3 156110408 Intron 7 7674 CEU:1.0;0.895, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs6790537 chr3 156108208 Intron 7 5474 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.88 FUNCTIONAL_SNP rs11926292 chr3 156105446 Intron 7 2712 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7622423 chr3 156097023 Intron 7 5711 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.91 FUNCTIONAL_SNP rs7613469 chr3 156097498 Intron 7 5236 CEU:1.0;0.895, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.88 FUNCTIONAL_SNP rs7631581 chr3 156099856 Intron 7 2878 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.953;0.869 FUNCTIONAL_SNP rs3772252 chr3 156096391 Intron 7 6343 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.913 FUNCTIONAL_SNP rs3821417 chr3 156101938 Intron 7 796 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3821419 chr3 156111374 Intron 7 8640 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs7619831 chr3 156099590 Intron 7 3144 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.953;0.869 FUNCTIONAL_SNP rs1450106 chr3 156105709 Intron 7 2975 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;0.846, YRI:1.0;1.0 LEAD_SNP rs2665390 chr3 156397749 Intron 5b ASSOCIATION 20852632 Ovarian cancer 6.52287874528 TIPARP FUNCTIONAL_SNP rs17440944 chr3 156579376 Intron 5a 181627 CEU:1.0;0.825 FUNCTIONAL_SNP rs7651446 chr3 156406997 Intron 5b 9248 CEU:1.0;0.825 FUNCTIONAL_SNP rs17440656 chr3 156558626 Intron 7 160877 CEU:1.0;0.825 FUNCTIONAL_SNP rs344008 chr3 156406399 Intron 7 8650 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs12638253 chr3 156626091 Intron 7 ASSOCIATION 19010793 Multiple sclerosis (severity) 5.69897000434 LEKR1 FUNCTIONAL_SNP rs10936043 chr3 156696506 Intron 4 70415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4680312 chr3 156605929 Intron 5b 20162 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9837038 chr3 156568469 Intron 5b 57622 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9865905 chr3 156649594 Intron 7 23503 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7637701 chr3 156645757 Intron 7 19666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs900400 chr3 156798775 Intergenic 6 ASSOCIATION 20372150 Birth weight 34.6989700043 LEKR1 - CCNL1 FUNCTIONAL_SNP rs10049088 chr3 156797648 Intergenic 5b 1127 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10049090 chr3 156797702 Intergenic 5b 1073 CEU:1.0;0.959, CHB:1.0;0.565, JPT:1.0;0.824 FUNCTIONAL_SNP rs13322435 chr3 156795468 Intergenic 5b 3307 CEU:1.0;0.924, JPT:1.0;0.833 FUNCTIONAL_SNP rs1482853 chr3 156798473 Intergenic 5b 302 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs17451107 chr3 156797609 Intergenic 5b 1166 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.569 FUNCTIONAL_SNP rs1482852 chr3 156798294 Intergenic 7 481 CEU:1.0;0.96, CHB:1.0;0.522, JPT:0.949;0.785 FUNCTIONAL_SNP rs900399 chr3 156798732 Intergenic 7 43 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4680338 chr3 156794425 Intergenic 7 4350 CEU:1.0;0.961, JPT:1.0;0.83 LEAD_SNP rs13064954 chr3 156854742 Intergenic 4 ASSOCIATION 21441570 Diabetic retinopathy 6.15490195999 LEKR1 - CCNL1 FUNCTIONAL_SNP rs13091531 chr3 156894096 Intron 2b 39354 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs13319093 chr3 156957264 Intron 4 102522 CEU:1.0;1.0, CHB:0.719;0.516, JPT:1.0;0.822 FUNCTIONAL_SNP rs11917697 chr3 156967568 Intron 5b 112826 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.74 FUNCTIONAL_SNP rs13325320 chr3 157051818 Intron 5b 197076 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs13321401 chr3 157011913 Intron 5b 157171 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs9814609 chr3 156956584 Intron 5b 101842 CEU:1.0;1.0 FUNCTIONAL_SNP rs10440022 chr3 157001472 Intron 5b 146730 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.822 FUNCTIONAL_SNP rs9821290 chr3 157019505 Intron 5b 164763 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs13072425 chr3 157040150 Intron 6 185408 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13077564 chr3 157046601 Intron 6 191859 CEU:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs12634613 chr3 156984216 Intron 6 129474 CEU:1.0;1.0, JPT:1.0;0.731 FUNCTIONAL_SNP rs9830661 chr3 156897868 Intron 7 43126 CEU:1.0;1.0, CHB:0.815;0.562, JPT:1.0;0.789 FUNCTIONAL_SNP rs9827476 chr3 156883141 Intron 7 28399 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs13319063 chr3 156987271 Intron 7 132529 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs9866141 chr3 156950579 Intron 7 95837 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs9812766 chr3 156947754 Intron 7 93012 CEU:1.0;1.0, CHB:0.839;0.608, JPT:1.0;0.846 FUNCTIONAL_SNP rs7613866 chr3 156964032 Intron 7 109290 CEU:1.0;1.0 FUNCTIONAL_SNP rs13090731 chr3 156964347 Intron 7 109605 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs9868982 chr3 156963404 Intron 7 108662 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs6764639 chr3 156951188 Intron 7 96446 CEU:1.0;1.0, CHB:0.839;0.608, JPT:1.0;1.0 FUNCTIONAL_SNP rs13060940 chr3 156959711 Intron 7 104969 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs13326287 chr3 156987632 Intron 7 132890 CEU:1.0;1.0, CHB:0.815;0.562, JPT:1.0;0.846 FUNCTIONAL_SNP rs13078493 chr3 157050385 Intron 7 195643 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs12696046 chr3 156981267 Intron 7 126525 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs16827382 chr3 156984757 Intron 7 130015 CEU:1.0;1.0, JPT:1.0;0.731 FUNCTIONAL_SNP rs13072252 chr3 157040067 Intron 7 185325 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 LEAD_SNP rs9866141 chr3 156950579 Intron 7 ASSOCIATION 21441570 Diabetic retinopathy 6.04575749056 KRT18P34 - VEPH1 FUNCTIONAL_SNP rs13091531 chr3 156894096 Intron 2b 56483 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13319093 chr3 156957264 Intron 4 6685 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13064954 chr3 156854742 Intergenic 4 95837 CEU:1.0;1.0, CHB:0.84;0.609, JPT:1.0;0.846 FUNCTIONAL_SNP rs11917697 chr3 156967568 Intron 5b 16989 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13325320 chr3 157051818 Intron 5b 101239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9817490 chr3 157066161 Intron 5b 115582 CEU:1.0;1.0 FUNCTIONAL_SNP rs13321401 chr3 157011913 Intron 5b 61334 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9814609 chr3 156956584 Intron 5b 6005 CEU:1.0;1.0 FUNCTIONAL_SNP rs10440022 chr3 157001472 Intron 5b 50893 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13083863 chr3 157101998 Intron 5b 151419 CEU:1.0;1.0 FUNCTIONAL_SNP rs9821290 chr3 157019505 Intron 5b 68926 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13072425 chr3 157040150 Intron 6 89571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs13077564 chr3 157046601 Intron 6 96022 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13316165 chr3 157079625 Intron 6 129046 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12634613 chr3 156984216 Intron 6 33637 CEU:1.0;1.0, CHB:1.0;0.758, JPT:1.0;0.864 FUNCTIONAL_SNP rs9830661 chr3 156897868 Intron 7 52711 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9827476 chr3 156883141 Intron 7 67438 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13319063 chr3 156987271 Intron 7 36692 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9812766 chr3 156947754 Intron 7 2825 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7613866 chr3 156964032 Intron 7 13453 CEU:1.0;1.0 FUNCTIONAL_SNP rs13090731 chr3 156964347 Intron 7 13768 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13078493 chr3 157050385 Intron 7 99806 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9868982 chr3 156963404 Intron 7 12825 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6764639 chr3 156951188 Intron 7 609 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13060940 chr3 156959711 Intron 7 9132 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13326287 chr3 156987632 Intron 7 37053 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12696046 chr3 156981267 Intron 7 30688 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16827382 chr3 156984757 Intron 7 34178 CEU:1.0;1.0, CHB:1.0;0.758, JPT:1.0;0.864 FUNCTIONAL_SNP rs13072252 chr3 157040067 Intron 7 89488 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2222328 chr3 159259291 Intron 5a ASSOCIATION 19197348 Quantitative traits 6.09691001301 SCHIP1 FUNCTIONAL_SNP rs1489909 chr3 159256780 Intron 5a 2511 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.947, YRI:1.0;0.88 FUNCTIONAL_SNP rs1387692 chr3 159255920 Intron 6 3371 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.947, YRI:1.0;0.88 FUNCTIONAL_SNP rs727234 chr3 159254385 Intron 7 4906 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.947, YRI:1.0;0.88 LEAD_SNP rs17810546 chr3 159665050 Intron 5b ASSOCIATION 20190752 Celiac disease 27.3979400087 RPS2P19 - IL12A ASSOCIATION 18311140 Celiac disease 9.0 RPS2P19 - IL12A FUNCTIONAL_SNP rs17753641 chr3 159647674 Intron 4 17376 CEU:1.0;1.0 FUNCTIONAL_SNP rs17809756 chr3 159630084 Intergenic 6 34966 CEU:1.0;1.0 LEAD_SNP rs4680534 chr3 159698945 Intron 6 ASSOCIATION 19525953 Multiple sclerosis 5.22184874962 RPS2P19 - IL12A FUNCTIONAL_SNP rs2366408 chr3 159696099 Intron 5a 2846 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.91, YRI:1.0;0.93 LEAD_SNP rs6441286 chr3 159728878 Intron 6 ASSOCIATION 20639880 Primary biliary cirrhosis 11.096910013 IL12A - BRD7P2 ASSOCIATION 19458352 Primary biliary cirrhosis 13.6989700043 IL12A - BRD7P2 FUNCTIONAL_SNP rs4679868 chr3 159724154 Intron 5a 4724 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.905, YRI:0.946;0.895 FUNCTIONAL_SNP rs9852519 chr3 159720628 Intron 7 8250 CEU:1.0;0.958, CHB:1.0;0.953, JPT:1.0;0.905, YRI:0.946;0.895 FUNCTIONAL_SNP rs2279741 chr3 159744261 Intron 7 15383 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.905, YRI:1.0;0.949 LEAD_SNP rs485499 chr3 159745863 Intron 4 ASSOCIATION 21399635 Primary biliary cirrhosis 15.6989700043 LOC730109 FUNCTIONAL_SNP rs485789 chr3 159730148 Intron 2b 15715 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs629209 chr3 159728713 Intron 2b 17150 CEU:1.0;1.0, CHB:1.0;0.576, JPT:1.0;0.51 FUNCTIONAL_SNP rs484600 chr3 159729961 Intron 2b 15902 CEU:1.0;1.0, CHB:1.0;0.574, JPT:1.0;0.51 FUNCTIONAL_SNP rs4680536 chr3 159720271 Intron 5b 25592 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6771363 chr3 159730682 Intron 5b 15181 CEU:1.0;1.0, CHB:1.0;0.576, JPT:1.0;0.51 FUNCTIONAL_SNP rs6808498 chr3 159730679 Intron 5b 15184 CEU:1.0;1.0, CHB:1.0;0.552, JPT:1.0;0.51 FUNCTIONAL_SNP rs491966 chr3 159733692 Intron 5b 12171 CEU:1.0;1.0, CHB:1.0;0.574, JPT:1.0;0.51 FUNCTIONAL_SNP rs564799 chr3 159728987 Intron 5b 16876 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs600519 chr3 159730417 Intron 5b 15446 CEU:1.0;1.0, CHB:1.0;0.576, JPT:1.0;0.509 FUNCTIONAL_SNP rs564976 chr3 159729059 Intron 5b 16804 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6441289 chr3 159732882 Intron 6 12981 CEU:1.0;1.0, CHB:1.0;0.57, JPT:1.0;0.504 FUNCTIONAL_SNP rs669003 chr3 159731885 Intron 6 13978 CEU:1.0;1.0, CHB:1.0;0.576 FUNCTIONAL_SNP rs545232 chr3 159732031 Intron 6 13832 CEU:1.0;1.0, CHB:1.0;0.576, JPT:1.0;0.51 FUNCTIONAL_SNP rs480913 chr3 159729580 Intron 6 16283 CEU:1.0;1.0, CHB:1.0;0.576, JPT:1.0;0.51 FUNCTIONAL_SNP rs586094 chr3 159729548 Intron 6 16315 CEU:1.0;1.0, CHB:1.0;0.576, JPT:1.0;0.51 FUNCTIONAL_SNP rs1651081 chr3 159732502 Intron 7 13361 CEU:1.0;1.0, CHB:1.0;0.576, JPT:1.0;0.51 FUNCTIONAL_SNP rs2366643 chr3 159736485 Intron 7 9378 CEU:1.0;1.0, CHB:1.0;0.576, JPT:1.0;0.51 FUNCTIONAL_SNP rs4679867 chr3 159723903 Intron 7 21960 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2914116 chr3 159731300 Intron 7 14563 CEU:1.0;1.0, CHB:1.0;0.574, JPT:1.0;0.51 FUNCTIONAL_SNP rs574808 chr3 159732983 Intron 7 12880 CEU:1.0;1.0, CHB:1.0;0.576, JPT:1.0;0.51 FUNCTIONAL_SNP rs589545 chr3 159733600 Intron 7 12263 CEU:1.0;1.0, CHB:1.0;0.574, JPT:1.0;0.51 FUNCTIONAL_SNP rs545143 chr3 159731995 Intron 7 13868 CEU:1.0;1.0, CHB:1.0;0.576 LEAD_SNP rs4679904 chr3 160340896 Intergenic 7 ASSOCIATION 19458352 Primary biliary cirrhosis 6.0 RPL6P8 - ARL14 FUNCTIONAL_SNP rs11719750 chr3 160152770 Exon,non-coding 6 188126 CEU:1.0;0.844, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;0.825 FUNCTIONAL_SNP rs2178451 chr3 160335836 Intergenic 5a 5060 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;0.884, YRI:1.0;1.0 FUNCTIONAL_SNP rs4679906 chr3 160351187 Intergenic 5b 10291 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs4680586 chr3 160182911 Intergenic 5b 157985 CEU:1.0;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs4679907 chr3 160351401 Intergenic 5b 10505 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17826257 chr3 160262803 Intron 5b 78093 CEU:0.956;0.914, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs4679903 chr3 160328568 Intergenic 6 12328 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1920638 chr3 160345169 Intergenic 6 4273 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13065269 chr3 160352319 Intergenic 7 11423 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs17236494 chr3 160173600 Intergenic 7 167296 CEU:1.0;0.84, CHB:1.0;0.91, JPT:1.0;0.927, YRI:1.0;0.825 FUNCTIONAL_SNP rs11713230 chr3 160355942 Intergenic 7 15046 CEU:1.0;0.897, CHB:1.0;0.895, JPT:1.0;0.913, YRI:1.0;0.824 FUNCTIONAL_SNP rs12632274 chr3 160343281 Intergenic 7 2385 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6808138 chr3 161392576 Intergenic 7 ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.09691001301 OTOL1 - TOMM22P6 ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.30102999566 OTOL1 - TOMM22P6 LEAD_SNP rs7427021 chr3 163761964 Intergenic 7 ASSOCIATION 19416921 Bipolar disorder 5.30102999566 RNU7-82P - SI LEAD_SNP rs1523288 chr3 165280209 Intron 6 ASSOCIATION 20445134 Heart failure 5.22184874962 SLITRK3 - BCHE FUNCTIONAL_SNP rs9847083 chr3 165277899 Intron 6 2310 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4634149 chr3 165270444 Intron 7 9765 CEU:1.0;0.825, YRI:1.0;1.0 LEAD_SNP rs4345115 chr3 167837748 Intergenic 5b ASSOCIATION 18391951 Height 5.15490195999 GOLIM4 - EGFEM1P FUNCTIONAL_SNP rs7651617 chr3 167838679 Intergenic 5b 931 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6774494 chr3 169082633 Intron 7 ASSOCIATION 20512145 Nasopharyngeal carcinoma 8.0 MDS1 FUNCTIONAL_SNP rs1522278 chr3 169075078 Intron 7 7555 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs448378 chr3 169100899 Intron 7 ASSOCIATION 20700443 Serum magnesium levels 8.0 MDS1 ASSOCIATION 19430479 Systolic blood pressure 7.0 MDS1 FUNCTIONAL_SNP rs4955658 chr3 169171347 Intron 4 70448 CEU:1.0;1.0, CHB:1.0;0.576, JPT:1.0;1.0 FUNCTIONAL_SNP rs4245909 chr3 169172788 Intron 4 71889 CEU:1.0;0.821, JPT:1.0;0.64, YRI:0.843;0.66 FUNCTIONAL_SNP rs1273881 chr3 169109823 Intron 5a 8924 CEU:1.0;0.814, CHB:1.0;0.656, JPT:1.0;1.0 FUNCTIONAL_SNP rs1290784 chr3 169096900 Intron 5b 3999 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1290786 chr3 169097381 Intron 5b 3518 CEU:1.0;0.96, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;0.599 FUNCTIONAL_SNP rs10804833 chr3 169173670 Intron 5b 72771 CEU:1.0;0.821, JPT:1.0;0.594, YRI:0.823;0.54 FUNCTIONAL_SNP rs1918966 chr3 169128274 Intron 5b 27375 CEU:1.0;1.0, CHB:1.0;0.656, JPT:1.0;1.0, YRI:1.0;0.645 FUNCTIONAL_SNP rs2115959 chr3 169117792 Intron 5b 16893 CEU:1.0;1.0, CHB:1.0;0.656, JPT:1.0;1.0, YRI:1.0;0.645 FUNCTIONAL_SNP rs4955647 chr3 169121931 Intron 5b 21032 CEU:1.0;0.96, CHB:1.0;0.656, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs419076 chr3 169100886 Intron 6 13 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1273886 chr3 169091253 Intron 6 9646 CEU:1.0;0.814, CHB:1.0;0.904, JPT:1.0;1.0 FUNCTIONAL_SNP rs13094827 chr3 169183469 Intron 6 82570 CEU:1.0;0.837, CHB:1.0;0.542, JPT:1.0;1.0 FUNCTIONAL_SNP rs9290366 chr3 169117005 Intron 6 16106 CEU:1.0;1.0, CHB:1.0;0.656, JPT:1.0;1.0, YRI:1.0;0.645 FUNCTIONAL_SNP rs7626980 chr3 169155318 Intron 6 54419 CEU:1.0;1.0, CHB:1.0;0.656, JPT:1.0;1.0, YRI:0.951;0.584 FUNCTIONAL_SNP rs1918974 chr3 169165888 Intron 6 64989 CEU:1.0;1.0, CHB:1.0;0.575, JPT:1.0;1.0, YRI:0.949;0.54 FUNCTIONAL_SNP rs223102 chr3 169100755 Intron 7 144 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs988397 chr3 169098791 Intron 7 2108 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs988398 chr3 169098861 Intron 7 2038 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1290790 chr3 169091569 Intron 7 9330 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1343040 chr3 169186293 Intron 7 85394 CEU:1.0;0.852, CHB:1.0;0.576, JPT:1.0;1.0 FUNCTIONAL_SNP rs2421647 chr3 169113110 Intron 7 12211 CEU:1.0;1.0, CHB:1.0;0.656, JPT:1.0;0.904, YRI:1.0;0.599 FUNCTIONAL_SNP rs1528293 chr3 169154511 Intron 7 53612 CEU:1.0;0.854, JPT:1.0;0.64, YRI:0.85;0.722 FUNCTIONAL_SNP rs6779380 chr3 169111915 Intron 7 11016 CEU:1.0;1.0, CHB:1.0;0.632, JPT:1.0;1.0, YRI:1.0;0.599 FUNCTIONAL_SNP rs2014590 chr3 169146497 Intron 7 45598 CEU:1.0;0.83, JPT:1.0;0.584 LEAD_SNP rs1918974 chr3 169165888 Intron 6 ASSOCIATION 19430483 Diastolic blood pressure 7.09691001301 MDS1 FUNCTIONAL_SNP rs4955658 chr3 169171347 Intron 4 5459 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4245909 chr3 169172788 Intron 4 6900 CEU:1.0;0.821, JPT:1.0;0.639, YRI:0.901;0.524 FUNCTIONAL_SNP rs1273881 chr3 169109823 Intron 5a 56065 CEU:1.0;0.814, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1290784 chr3 169096900 Intron 5b 68988 CEU:0.962;0.926, CHB:1.0;0.577, JPT:1.0;1.0, YRI:0.911;0.52 FUNCTIONAL_SNP rs1290786 chr3 169097381 Intron 5b 68507 CEU:1.0;0.962, CHB:1.0;0.633, JPT:1.0;1.0, YRI:0.896;0.776 FUNCTIONAL_SNP rs10804833 chr3 169173670 Intron 5b 7782 CEU:1.0;0.829, JPT:1.0;0.613 FUNCTIONAL_SNP rs1918966 chr3 169128274 Intron 5b 37614 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:0.961;0.859 FUNCTIONAL_SNP rs2115959 chr3 169117792 Intron 5b 48096 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:0.961;0.859 FUNCTIONAL_SNP rs4955647 chr3 169121931 Intron 5b 43957 CEU:1.0;0.962, CHB:1.0;0.878, JPT:1.0;1.0, YRI:0.961;0.829 FUNCTIONAL_SNP rs419076 chr3 169100886 Intron 6 65002 CEU:1.0;1.0, CHB:1.0;0.576, JPT:1.0;1.0, YRI:0.954;0.581 FUNCTIONAL_SNP rs1273886 chr3 169091253 Intron 6 74635 CEU:1.0;0.814, CHB:1.0;0.602, JPT:1.0;1.0 FUNCTIONAL_SNP rs13094827 chr3 169183469 Intron 6 17581 CEU:1.0;0.843, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9290366 chr3 169117005 Intron 6 48883 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:0.961;0.859 FUNCTIONAL_SNP rs7626980 chr3 169155318 Intron 6 10570 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs988397 chr3 169098791 Intron 7 67097 CEU:1.0;0.961, CHB:1.0;0.575, JPT:1.0;1.0, YRI:0.949;0.54 FUNCTIONAL_SNP rs1290790 chr3 169091569 Intron 7 74319 CEU:1.0;0.961, CHB:1.0;0.577, JPT:1.0;1.0, YRI:0.955;0.551 FUNCTIONAL_SNP rs1343040 chr3 169186293 Intron 7 20405 CEU:1.0;0.858, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2421647 chr3 169113110 Intron 7 52778 CEU:1.0;1.0, CHB:1.0;0.878, JPT:1.0;0.911, YRI:0.896;0.776 FUNCTIONAL_SNP rs1528293 chr3 169154511 Intron 7 11377 CEU:1.0;0.861, JPT:1.0;0.658, YRI:1.0;0.626 FUNCTIONAL_SNP rs988398 chr3 169098861 Intron 7 67027 CEU:1.0;0.961, CHB:1.0;0.576, JPT:1.0;1.0, YRI:0.954;0.551 FUNCTIONAL_SNP rs6779380 chr3 169111915 Intron 7 53973 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:0.888;0.788 FUNCTIONAL_SNP rs223102 chr3 169100755 Intron 7 65133 CEU:1.0;1.0, CHB:1.0;0.577, JPT:1.0;1.0, YRI:0.955;0.551 FUNCTIONAL_SNP rs448378 chr3 169100899 Intron 7 64989 CEU:1.0;1.0, CHB:1.0;0.575, JPT:1.0;1.0, YRI:0.949;0.54 LEAD_SNP rs12696304 chr3 169481271 Intergenic 5a ASSOCIATION 21573004 Telomere length 13.6989700043 LOC100287726 ASSOCIATION 20139977 Telomere length 13.3979400087 LOC100287726 FUNCTIONAL_SNP rs10936599 chr3 169492101 Coding 5b 10830 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs10936600 chr3 169514585 Coding 7 33314 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs6793295 chr3 169518455 Coding 7 37184 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1920122 chr3 169506141 Exon,non-coding 7 24870 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs3821383 chr3 169489946 Intergenic 2b 8675 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs7625734 chr3 169508915 Intergenic 3a 27644 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12638862 chr3 169477506 Intergenic 5a 3765 CEU:1.0;0.946, CHB:1.0;0.821, JPT:1.0;0.775 FUNCTIONAL_SNP rs10936601 chr3 169528449 Intron 5b 47178 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.924;0.793 FUNCTIONAL_SNP rs13069553 chr3 169508272 Intergenic 5b 27001 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs3796145 chr3 169524862 Intron 5b 43591 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs7633750 chr3 169509244 Intergenic 5b 27973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs3950296 chr3 169493283 Intron 5b 12012 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs9831661 chr3 169528523 Intron 5b 47252 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.924;0.793 FUNCTIONAL_SNP rs3772190 chr3 169500487 Intron 6 19216 CEU:1.0;0.886, CHB:1.0;0.783, JPT:1.0;0.816 FUNCTIONAL_SNP rs1317082 chr3 169497585 Intron 6 16314 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs9868000 chr3 169510789 Intergenic 6 29518 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1920120 chr3 169502180 Intron 6 20909 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9860874 chr3 169486271 Intron 7 5000 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2141595 chr3 169503432 Intron 7 22161 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.92;0.732 FUNCTIONAL_SNP rs9822885 chr3 169486144 Intron 7 4873 CEU:0.941;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12630450 chr3 169480204 Intergenic 7 1067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1997392 chr3 169509652 Intergenic 7 28381 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9827710 chr3 169522387 Intron 7 41116 CEU:1.0;1.0 FUNCTIONAL_SNP rs7621631 chr3 169512145 Intron 7 30874 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 LEAD_SNP rs10936599 chr3 169492101 Coding 5b ASSOCIATION 20972440 Colorectal cancer 7.52287874528 MYNN ASSOCIATION 20190752 Celiac disease 6.30102999566 MYNN FUNCTIONAL_SNP rs10936600 chr3 169514585 Coding 7 22484 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6793295 chr3 169518455 Coding 7 26354 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs1920122 chr3 169506141 Exon,non-coding 7 14040 CEU:1.0;0.894, CHB:0.942;0.731, JPT:1.0;0.767 FUNCTIONAL_SNP rs3821383 chr3 169489946 Intergenic 2b 2155 CEU:1.0;0.894, CHB:0.942;0.731, JPT:1.0;0.775 FUNCTIONAL_SNP rs7625734 chr3 169508915 Intergenic 3a 16814 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs12638862 chr3 169477506 Intergenic 5a 14595 CEU:1.0;0.945, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs12696304 chr3 169481271 Intergenic 5a 10830 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs10936601 chr3 169528449 Intron 5b 36348 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs13069553 chr3 169508272 Intergenic 5b 16171 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3796145 chr3 169524862 Intron 5b 32761 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7633750 chr3 169509244 Intergenic 5b 17143 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs3950296 chr3 169493283 Intron 5b 1182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9831661 chr3 169528523 Intron 5b 36422 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs3772190 chr3 169500487 Intron 6 8386 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1317082 chr3 169497585 Intron 6 5484 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9868000 chr3 169510789 Intergenic 6 18688 CEU:1.0;0.944, CHB:1.0;0.817, JPT:1.0;0.775 FUNCTIONAL_SNP rs1920120 chr3 169502180 Intron 6 10079 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.823 FUNCTIONAL_SNP rs9860874 chr3 169486271 Intron 7 5830 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs2141595 chr3 169503432 Intron 7 11331 CEU:1.0;0.893, CHB:1.0;0.817, JPT:1.0;0.775 FUNCTIONAL_SNP rs12630450 chr3 169480204 Intergenic 7 11897 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs1997392 chr3 169509652 Intergenic 7 17551 CEU:1.0;0.894, CHB:1.0;0.783, JPT:1.0;0.775 FUNCTIONAL_SNP rs9827710 chr3 169522387 Intron 7 30286 CEU:1.0;0.894 FUNCTIONAL_SNP rs7621631 chr3 169512145 Intron 7 20044 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6444931 chr3 170163474 Intron 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.22184874962 CLDN11 - SLC7A14 FUNCTIONAL_SNP rs6444930 chr3 170162684 Intron 6 790 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs6789670 chr3 170166138 Intron 6 2664 CEU:1.0;1.0, CHB:1.0;0.692 FUNCTIONAL_SNP rs4955725 chr3 170169620 Intron 7 6146 CEU:1.0;0.913, CHB:1.0;0.777, JPT:1.0;0.697 FUNCTIONAL_SNP rs6764438 chr3 170166091 Intron 7 2617 CEU:1.0;0.913, CHB:1.0;0.825, JPT:1.0;0.66 FUNCTIONAL_SNP rs6789806 chr3 170166274 Intron 7 2800 CEU:1.0;0.847, CHB:1.0;0.692 LEAD_SNP rs4955755 chr3 170494409 Intron 5b ASSOCIATION 19448619 Menopause (age at onset) 6.15490195999 RPL28P1 - RPL22L1 LEAD_SNP rs11920090 chr3 170717521 Intron 4 ASSOCIATION 20081858 Fasting glucose-related traits 5.30102999566 SLC2A2 ASSOCIATION 20081858 Fasting glucose-related traits 12.096910013 SLC2A2 FUNCTIONAL_SNP rs5400 chr3 170732300 Coding 4 14779 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.505 FUNCTIONAL_SNP rs12487486 chr3 170718131 Intron 3a 610 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs11924648 chr3 170717996 Intron 3a 475 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.703 FUNCTIONAL_SNP rs7635470 chr3 170696065 Intergenic 4 21456 CEU:1.0;1.0, CHB:1.0;0.659, YRI:0.961;0.858 FUNCTIONAL_SNP rs11928798 chr3 170727408 Intron 4 9887 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.915;0.628 FUNCTIONAL_SNP rs12496734 chr3 170693767 Intergenic 4 23754 CEU:1.0;1.0, CHB:1.0;0.659, YRI:0.961;0.858 FUNCTIONAL_SNP rs11721319 chr3 170710808 Intergenic 4 6713 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.846 FUNCTIONAL_SNP rs6785803 chr3 170729873 Intron 5a 12352 CEU:1.0;1.0, YRI:1.0;0.5 FUNCTIONAL_SNP rs16855578 chr3 170684592 Intergenic 5a 32929 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs5406 chr3 170723276 Intron 5a 5755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.903;0.591 FUNCTIONAL_SNP rs10513689 chr3 170727658 Intron 5b 10137 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.905;0.598 FUNCTIONAL_SNP rs16855595 chr3 170694060 Intergenic 5b 23461 CEU:1.0;1.0, CHB:1.0;0.659, YRI:0.961;0.858 FUNCTIONAL_SNP rs6780208 chr3 170686066 Intergenic 5b 31455 CEU:1.0;1.0, YRI:0.961;0.858 FUNCTIONAL_SNP rs11720640 chr3 170694237 Intergenic 5b 23284 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.923 FUNCTIONAL_SNP rs7635100 chr3 170695711 Intergenic 5b 21810 CEU:1.0;1.0, CHB:1.0;0.659, YRI:0.961;0.857 FUNCTIONAL_SNP rs11709140 chr3 170694497 Intergenic 5b 23024 CEU:1.0;1.0, CHB:1.0;0.659, YRI:0.957;0.845 FUNCTIONAL_SNP rs1905506 chr3 170695385 Intergenic 5b 22136 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.924 FUNCTIONAL_SNP rs1280 chr3 170713290 Intergenic 6 4231 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6776099 chr3 170684314 Intergenic 6 33207 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.89 FUNCTIONAL_SNP rs1499820 chr3 170711968 Intergenic 6 5553 CEU:1.0;0.93, CHB:1.0;0.659, YRI:0.955;0.617 FUNCTIONAL_SNP rs35297160 chr3 170738981 Intron 6 21460 CEU:1.0;0.846, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.652 FUNCTIONAL_SNP rs11929535 chr3 170710456 Intergenic 6 7065 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12496506 chr3 170693011 Intergenic 6 24510 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs10513686 chr3 170725542 Intron 7 8021 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.63 FUNCTIONAL_SNP rs12495622 chr3 170684878 Intergenic 7 32643 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs12486792 chr3 170677123 Intergenic 7 40398 CEU:1.0;1.0, YRI:1.0;0.881 FUNCTIONAL_SNP rs10513685 chr3 170724390 Intron 7 6869 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.904;0.616 FUNCTIONAL_SNP rs10513687 chr3 170725730 Intron 7 8209 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.915;0.628 FUNCTIONAL_SNP rs1996220 chr3 170722448 Intron 7 4927 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.91;0.656 FUNCTIONAL_SNP rs16847990 chr3 170702422 Intergenic 7 15099 CEU:1.0;1.0, CHB:1.0;0.659, YRI:0.957;0.845 FUNCTIONAL_SNP rs11919048 chr3 170574165 Intron 7 143356 CEU:0.921;0.849 FUNCTIONAL_SNP rs11711437 chr3 170726363 Intron 7 8842 CEU:1.0;1.0, CHB:1.0;0.659 FUNCTIONAL_SNP rs10936661 chr3 170572112 Intron 7 145409 CEU:0.921;0.849 FUNCTIONAL_SNP rs11720145 chr3 170739663 Intron 7 22142 CEU:1.0;0.856, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.676 LEAD_SNP rs11920719 chr3 170834559 Intron 5a ASSOCIATION 21347282 Coronary heart disease 5.39794000867 TNIK LEAD_SNP rs2088885 chr3 170971291 Intron 5b ASSOCIATION 19023125 Brain imaging in schizophrenia (interaction) 5.22184874962 TNIK FUNCTIONAL_SNP rs7627954 chr3 170979975 Intron 4 8684 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4894459 chr3 170980869 Intron 5a 9578 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs4894463 chr3 170981313 Intron 5a 10022 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs6772621 chr3 170977841 Intron 5b 6550 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs957130 chr3 170975442 Intron 5b 4151 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.92 FUNCTIONAL_SNP rs11917336 chr3 170970130 Intron 7 1161 CEU:1.0;0.961, CHB:1.0;0.947, JPT:1.0;0.949, YRI:1.0;1.0 LEAD_SNP rs6794092 chr3 171558344 Intergenic 6 ASSOCIATION 21701570 Body mass index 5.69897000434 PLD1 - TMEM212 LEAD_SNP rs572169 chr3 172165727 Coding 5b ASSOCIATION 20881960 Height 17.5228787453 GHSR FUNCTIONAL_SNP rs509035 chr3 172163449 Intron 5b 2278 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs519896 chr3 172134550 Intergenic 7 31177 CEU:1.0;0.81, CHB:1.0;0.911, JPT:1.0;0.59 FUNCTIONAL_SNP rs485554 chr3 172137343 Intergenic 7 28384 CEU:1.0;1.0, CHB:1.0;0.954, JPT:0.951;0.904, YRI:1.0;1.0 LEAD_SNP rs13074924 chr3 174029045 Intergenic 7 ASSOCIATION 20516156 Major depressive disorder 5.04575749056 NLGN1 - RPL8P4 FUNCTIONAL_SNP rs9821632 chr3 174024904 Intergenic 7 4141 CEU:1.0;0.958, CHB:1.0;0.915, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs551121 chr3 174008387 Intergenic 7 20658 CEU:1.0;0.958, CHB:1.0;0.753, JPT:1.0;0.758, YRI:0.799;0.571 FUNCTIONAL_SNP rs12639578 chr3 174050915 Intergenic 7 21870 CEU:1.0;0.957 LEAD_SNP rs17531088 chr3 174893775 Intron 7 ASSOCIATION 19132087 Kawasaki disease 6.0 NAALADL2 LEAD_SNP rs1463525 chr3 174961387 Intron 7 ASSOCIATION 21408207 Systemic lupus erythematosus 5.09691001301 NAALADL2 FUNCTIONAL_SNP rs10936833 chr3 174963892 Intron 7 2505 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10936834 chr3 174964073 Intron 7 2686 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13060681 chr3 174963278 Intron 7 1891 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.897;0.667 FUNCTIONAL_SNP rs13080669 chr3 174963362 Intron 7 1975 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 LEAD_SNP rs6772209 chr3 175647165 Intergenic 7 ASSOCIATION 21642993 Esophageal cancer 6.52287874528 UBE2V1P2 - TBL1XR1 LEAD_SNP rs6799767 chr3 176030096 Intergenic 5a ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 6.39794000867 UBE2V1P2 - TBL1XR1 FUNCTIONAL_SNP rs2862418 chr3 176026937 Intergenic 5a 3159 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs6799664 chr3 176029944 Intergenic 6 152 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1483626 chr3 176025199 Intergenic 6 4897 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs951461 chr3 176030190 Intergenic 7 94 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs1483625 chr3 176025170 Intergenic 7 4926 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.924 LEAD_SNP rs12629106 chr3 177095072 Intergenic 5b ASSOCIATION 21408207 Systemic lupus erythematosus 5.39794000867 ASS1P7 - KCNMB2 FUNCTIONAL_SNP rs4857680 chr3 177100395 Intergenic 6 5323 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12635381 chr3 177090982 Intergenic 6 4090 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6780334 chr3 177085939 Intergenic 7 9133 CEU:1.0;1.0, JPT:1.0;0.65 LEAD_SNP rs644695 chr3 177291697 Intron 7 ASSOCIATION 20038947 Major depressive disorder (broad) 5.30102999566 ASS1P7 - KCNMB2 LEAD_SNP rs7612209 chr3 177596989 Intron 4 ASSOCIATION 19734545 Cognitive performance 5.39794000867 ASS1P7 - KCNMB2 FUNCTIONAL_SNP rs1656384 chr3 177598374 Intron 6 1385 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 LEAD_SNP rs1982821 chr3 177793107 Intergenic 5b ASSOCIATION 21294900 Serum uric acid 5.39794000867 ASS1P7 - KCNMB2 LEAD_SNP rs9290663 chr3 178429939 Intron 6 ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 5.22184874962 KCNMB2 LEAD_SNP rs7630877 chr3 179661318 Intron 2b ASSOCIATION 21490949 Type 2 diabetes 5.15490195999 PEX5L LEAD_SNP rs6782299 chr3 180550702 Intron 7 ASSOCIATION 19571811 Schizophrenia 7.0 FLYWCH1P1 - RPL32P10 FUNCTIONAL_SNP rs7640601 chr3 180524764 Intron 5b 25938 CEU:1.0;0.835, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1879248 chr3 180551214 Intron 5b 512 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1607678 chr3 180584718 Intron 6 34016 CEU:1.0;0.936, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs2139551 chr3 180536365 Intron 7 14337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2337743 chr3 180576673 Intron 7 25971 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1915104 chr3 180556904 Intron 7 6202 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9838229 chr3 180533251 Intron 7 17451 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10513789 chr3 182760073 Intron 7 ASSOCIATION 21738487 Parkinson's disease 9.52287874528 MCCC1 FUNCTIONAL_SNP rs9858038 chr3 182730291 Intergenic 5b 29782 CEU:1.0;1.0, CHB:1.0;0.906, JPT:0.951;0.904, YRI:1.0;0.941 FUNCTIONAL_SNP rs9877655 chr3 182739376 Intron 6 20697 CEU:1.0;1.0, CHB:1.0;0.905, JPT:1.0;0.952, YRI:1.0;0.942 FUNCTIONAL_SNP rs10937108 chr3 182748495 Intron 7 11578 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;1.0, YRI:1.0;0.942 FUNCTIONAL_SNP rs9879377 chr3 182734481 Intron 7 25592 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.952, YRI:1.0;0.93 FUNCTIONAL_SNP rs9290751 chr3 182732230 Intergenic 7 27843 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.952, YRI:1.0;0.942 LEAD_SNP rs11711441 chr3 182821275 Intron 4 ASSOCIATION 21292315 Parkinson's disease 11.096910013 MCCC1 - LAMP3 LEAD_SNP rs683395 chr3 182869818 Intron 3a ASSOCIATION 17554300 Bipolar disorder 5.30102999566 LAMP3 FUNCTIONAL_SNP rs625677 chr3 182873502 Intron 2b 3684 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs682396 chr3 182870082 Intron 4 264 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs589445 chr3 182868995 Intron 5b 823 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6414499 chr3 182871248 Intron 5b 1430 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs6414500 chr3 182871299 Intron 5b 1481 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs514636 chr3 182870436 Intron 5b 618 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3914188 chr3 184010048 Exon,non-coding 5b ASSOCIATION 21102462 Menarche (age at onset) 6.52287874528 ECE2 FUNCTIONAL_SNP rs35637422 chr3 184009586 Intron 4 462 CEU:1.0;0.827, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10804892 chr3 184029232 Intron 5b 19184 CEU:1.0;0.827, CHB:1.0;0.908, JPT:1.0;0.897 FUNCTIONAL_SNP rs2376524 chr3 184011561 Intron 7 1513 CEU:1.0;0.853, CHB:1.0;0.913, JPT:1.0;0.899 LEAD_SNP rs3930234 chr3 184216130 Intron 7 ASSOCIATION 21529783 Alcoholism (alcohol use disorder factor score) 5.09691001301 CHRD - EPHB3 LEAD_SNP rs7647854 chr3 184876783 Intergenic 7 ASSOCIATION 21042317 Major depressive disorder 5.30102999566 C3orf70 - EHHADH LEAD_SNP rs7374394 chr3 184945849 Intron 7 ASSOCIATION 19734545 Cognitive performance 5.69897000434 EHHADH FUNCTIONAL_SNP rs2301052 chr3 184953662 Intron 4 7813 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs721814 chr3 184925384 Intron 5a 20465 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs12696543 chr3 184968818 Intron 5b 22969 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.918;0.81 FUNCTIONAL_SNP rs9851199 chr3 184939351 Intron 6 6498 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9852812 chr3 184936419 Intron 7 9430 CEU:1.0;0.847, CHB:0.95;0.903, JPT:1.0;1.0, YRI:1.0;0.886 FUNCTIONAL_SNP rs1509501 chr3 184927907 Intron 7 17942 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4402960 chr3 185511687 Intron 7 ASSOCIATION 19401414 Type 2 diabetes 6.0 IGF2BP2 ASSOCIATION 18372903 Type 2 diabetes 7.09691001301 IGF2BP2 ASSOCIATION 17463246 Type 2 diabetes 8.69897000434 IGF2BP2 ASSOCIATION 17463248 Type 2 diabetes 15.0457574906 IGF2BP2 ASSOCIATION 17463249 Type 2 diabetes 15.0457574906 IGF2BP2 FUNCTIONAL_SNP rs6444081 chr3 185514393 Intron 4 2706 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.849 FUNCTIONAL_SNP rs7646518 chr3 185514931 Intron 4 3244 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs4686696 chr3 185516520 Intron 5a 4833 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs10428126 chr3 185520342 Intron 5b 8655 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs6767484 chr3 185520578 Intron 5b 8891 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs7640539 chr3 185513296 Intron 6 1609 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs7637773 chr3 185515635 Intron 7 3948 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs7651090 chr3 185513392 Intron 7 1705 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs11929397 chr3 185510190 Intron 7 1497 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 LEAD_SNP rs1470579 chr3 185529080 Intron 7 ASSOCIATION 20581827 Type 2 diabetes 8.69897000434 IGF2BP2 FUNCTIONAL_SNP rs6444081 chr3 185514393 Intron 4 14687 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.843 FUNCTIONAL_SNP rs7646518 chr3 185514931 Intron 4 14149 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.85 FUNCTIONAL_SNP rs6769511 chr3 185530290 Intron 4 1210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs4686696 chr3 185516520 Intron 5a 12560 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.85 FUNCTIONAL_SNP rs6767577 chr3 185520732 Intron 5b 8348 CEU:1.0;0.904 FUNCTIONAL_SNP rs6444082 chr3 185536223 Intron 5b 7143 CEU:1.0;0.813, CHB:1.0;0.882, JPT:1.0;1.0, YRI:1.0;0.71 FUNCTIONAL_SNP rs16860234 chr3 185510884 Intron 5b 18196 CEU:1.0;1.0, CHB:1.0;0.518 FUNCTIONAL_SNP rs9859406 chr3 185534482 Intron 5b 5402 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11706322 chr3 185497293 Intron 5b 31787 CEU:1.0;0.904 FUNCTIONAL_SNP rs10428126 chr3 185520342 Intron 5b 8738 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.85 FUNCTIONAL_SNP rs6765808 chr3 185508029 Intron 5b 21051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1470581 chr3 185529327 Intron 5b 247 CEU:1.0;0.899, CHB:1.0;0.6 FUNCTIONAL_SNP rs6767484 chr3 185520578 Intron 5b 8502 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.85 FUNCTIONAL_SNP rs4376068 chr3 185497635 Intron 6 31445 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.85 FUNCTIONAL_SNP rs6801848 chr3 185499057 Intron 6 30023 CEU:1.0;0.892, CHB:1.0;0.76, JPT:1.0;0.849 FUNCTIONAL_SNP rs11711477 chr3 185526690 Intron 6 2390 CEU:1.0;1.0, CHB:1.0;0.932, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7640539 chr3 185513296 Intron 6 15784 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.85 FUNCTIONAL_SNP rs7648605 chr3 185490734 Intron 6 38346 CEU:1.0;0.904 FUNCTIONAL_SNP rs13073992 chr3 185490240 Intron 7 38840 CEU:1.0;0.904 FUNCTIONAL_SNP rs11705729 chr3 185507299 Intron 7 21781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7633675 chr3 185510613 Intron 7 18467 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7637773 chr3 185515635 Intron 7 13445 CEU:1.0;0.949, CHB:1.0;0.816, JPT:1.0;0.836 FUNCTIONAL_SNP rs4402960 chr3 185511687 Intron 7 17393 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.85 FUNCTIONAL_SNP rs7651090 chr3 185513392 Intron 7 15688 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.85 FUNCTIONAL_SNP rs4481184 chr3 185505787 Intron 7 23293 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.85 FUNCTIONAL_SNP rs7640744 chr3 185522447 Intron 7 6633 CEU:1.0;1.0, CHB:1.0;0.518 FUNCTIONAL_SNP rs13060777 chr3 185525199 Intron 7 3881 CEU:1.0;0.899 FUNCTIONAL_SNP rs11929397 chr3 185510190 Intron 7 18890 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.843 FUNCTIONAL_SNP rs16860235 chr3 185512361 Intron 7 16719 CEU:1.0;1.0 FUNCTIONAL_SNP rs9837654 chr3 185530322 Intron 7 1242 CEU:1.0;0.904, CHB:1.0;0.615 FUNCTIONAL_SNP rs1470580 chr3 185529174 Intron 7 94 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6769511 chr3 185530290 Intron 4 ASSOCIATION 18711366 Type 2 diabetes 9.0 IGF2BP2 FUNCTIONAL_SNP rs9859406 chr3 185534482 Intron 5b 4192 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs6765808 chr3 185508029 Intron 5b 22261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs11711477 chr3 185526690 Intron 6 3600 CEU:1.0;1.0, CHB:1.0;0.932, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs11705729 chr3 185507299 Intron 7 22991 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs7633675 chr3 185510613 Intron 7 19677 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs1470579 chr3 185529080 Intron 7 1210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs1470580 chr3 185529174 Intron 7 1116 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 LEAD_SNP rs1374910 chr3 185531661 Intron 4 ASSOCIATION 21573907 Type 2 diabetes 7.0 IGF2BP2 FUNCTIONAL_SNP rs16860219 chr3 185493590 Intron 7 38071 CEU:1.0;1.0 FUNCTIONAL_SNP rs7631169 chr3 185489311 Intron 7 42350 CEU:1.0;1.0 LEAD_SNP rs720390 chr3 185548683 Intergenic 7 ASSOCIATION 20881960 Height 13.6989700043 C3orf65 - TRA2B FUNCTIONAL_SNP rs764129 chr3 185547917 Intergenic 5b 766 CEU:1.0;0.92 FUNCTIONAL_SNP rs11705701 chr3 185544309 Intergenic 5b 4374 CEU:1.0;0.92 LEAD_SNP rs6444087 chr3 185621829 Intergenic 7 ASSOCIATION 19247474 Smoking behavior 5.04575749056 C3orf65 - TRA2B LEAD_SNP rs2002675 chr3 185629568 Intergenic 5a ASSOCIATION 21102462 Menarche (age at onset) 9.0 C3orf65 - TRA2B FUNCTIONAL_SNP rs2284909 chr3 185646406 Intron 2b 16838 CEU:1.0;1.0, CHB:0.904;0.69, JPT:1.0;0.673, YRI:1.0;1.0 FUNCTIONAL_SNP rs16860342 chr3 185652947 Intron 4 23379 CEU:1.0;1.0, CHB:0.904;0.69, JPT:1.0;0.737, YRI:1.0;1.0 FUNCTIONAL_SNP rs2300921 chr3 185651001 Intron 4 21433 CEU:1.0;1.0, CHB:0.903;0.687, JPT:1.0;0.708, YRI:1.0;1.0 FUNCTIONAL_SNP rs16860328 chr3 185635685 Intron 5a 6117 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2300922 chr3 185651469 Intron 5b 21901 CEU:1.0;1.0, CHB:0.904;0.69, JPT:1.0;0.736 LEAD_SNP rs10049246 chr3 185686741 Intron 7 ASSOCIATION 18846501 Attention deficit hyperactivity disorder symptoms (interaction) 5.09691001301 TRA2B - ETV5 LEAD_SNP rs7647305 chr3 185834290 Intron 6 ASSOCIATION 19079260 Body mass index 10.15490196 ETV5 - DGKG ASSOCIATION 19079260 Weight 8.39794000867 ETV5 - DGKG LEAD_SNP rs9816226 chr3 185834499 Intron 7 ASSOCIATION 20935630 Body mass index 17.6989700043 ETV5 - DGKG LEAD_SNP rs9898 chr3 186390627 Coding 5b ASSOCIATION 20303064 Activated partial thromboplastin time 11.0 HRG FUNCTIONAL_SNP rs3733159 chr3 186360409 Intron 7 30218 CEU:0.946;0.809, CHB:0.942;0.699, JPT:0.888;0.682, YRI:0.814;0.505 LEAD_SNP rs11924390 chr3 186433099 Intergenic 7 ASSOCIATION 20876611 Adiponectin levels 8.69897000434 HRG - KNG1 FUNCTIONAL_SNP rs1050274 chr3 186435370 Coding 5b 2271 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3806689 chr3 186435077 Exon,non-coding 2b 1978 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11927941 chr3 186433046 Intergenic 5b 53 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10937266 chr3 186433075 Intergenic 5b 24 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5029969 chr3 186434405 Intergenic 5b 1306 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3821815 chr3 186434262 Intergenic 5b 1163 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3774291 chr3 186433471 Intergenic 6 372 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3774292 chr3 186433574 Intergenic 6 475 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10440056 chr3 186433822 Intergenic 7 723 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs710446 chr3 186459927 Coding 7 ASSOCIATION 20303064 Activated partial thromboplastin time 21.0 KNG1 FUNCTIONAL_SNP rs5030062 chr3 186454180 Intron 6 5747 CEU:1.0;0.812, CHB:1.0;0.947, JPT:0.933;0.692 FUNCTIONAL_SNP rs698078 chr3 186459227 Intron 7 700 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs822354 chr3 186480206 Intergenic 6 ASSOCIATION 21700879 Adiponectin levels 7.39794000867 PSMD10P2 FUNCTIONAL_SNP rs266738 chr3 186477487 Intergenic 5b 2719 CEU:1.0;0.954, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs822355 chr3 186480123 Intergenic 6 83 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.889 LEAD_SNP rs266717 chr3 186530484 Intron 7 ASSOCIATION 20011104 Adiponectin levels 18.0457574906 RFC4 - ADIPOQ FUNCTIONAL_SNP rs187868 chr3 186509517 Coding 5b 20967 CEU:1.0;0.854, CHB:0.94;0.693, JPT:1.0;0.585 FUNCTIONAL_SNP rs266754 chr3 186508966 Intron 4 21518 CEU:1.0;0.851 FUNCTIONAL_SNP rs266759 chr3 186508312 Intron 4 22172 CEU:1.0;0.852, CHB:0.887;0.711 FUNCTIONAL_SNP rs185554 chr3 186494422 Intergenic 5b 36062 CEU:0.958;0.815 FUNCTIONAL_SNP rs843991 chr3 186516428 Intron 5b 14056 CEU:1.0;0.924, CHB:0.948;0.855, JPT:1.0;0.95, YRI:1.0;0.61 FUNCTIONAL_SNP rs710450 chr3 186522633 Intron 5b 7851 CEU:1.0;0.854, CHB:0.944;0.77, JPT:1.0;0.613 LEAD_SNP rs1648707 chr3 186551711 Intergenic 7 ASSOCIATION 20011104 Adiponectin levels 11.5228787453 RFC4 - ADIPOQ FUNCTIONAL_SNP rs6810075 chr3 186548565 Intergenic 5b 3146 CEU:0.957;0.916, CHB:1.0;0.87, JPT:1.0;0.532 FUNCTIONAL_SNP rs182052 chr3 186560782 Intron 5b 9071 CEU:1.0;1.0, CHB:1.0;0.87, JPT:1.0;0.532 FUNCTIONAL_SNP rs710445 chr3 186561518 Intron 7 9807 CEU:1.0;0.958, CHB:1.0;0.955, JPT:1.0;1.0 LEAD_SNP rs864265 chr3 186554292 Intergenic 6 ASSOCIATION 20876611 Adiponectin levels 19.0 RFC4 - ADIPOQ FUNCTIONAL_SNP rs1656930 chr3 186552857 Intergenic 7 1435 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 LEAD_SNP rs17366568 chr3 186570453 Exon,non-coding 5b ASSOCIATION 20018283 Adiponectin levels 41.0 ADIPOQ LEAD_SNP rs6773957 chr3 186573705 Exon,non-coding 7 ASSOCIATION 19165155 Adiponectin levels 7.30102999566 ADIPOQ FUNCTIONAL_SNP rs1063538 chr3 186574183 Exon,non-coding 7 478 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3774261 chr3 186571559 Intron 6 2146 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 LEAD_SNP rs10937275 chr3 186650790 Intron 4 ASSOCIATION 19483685 Drug-induced liver injury (flucloxacillin) 8.0 ST6GAL1 LEAD_SNP rs9820070 chr3 187687074 Intron 2b ASSOCIATION 20139978 Hematological and biochemical traits 11.0 BCL6 - FLJ42393 FUNCTIONAL_SNP rs11721263 chr3 187688435 Intron 7 1361 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0, YRI:0.953;0.867 LEAD_SNP rs1464510 chr3 188112554 Intron 4 ASSOCIATION 20410501 Vitiligo 11.0 LPP ASSOCIATION 20190752 Celiac disease 39.5228787453 LPP ASSOCIATION 18311140 Celiac disease 8.30102999566 LPP FUNCTIONAL_SNP rs13098877 chr3 188133163 Intron 3a 20609 CEU:1.0;0.961, CHB:1.0;0.911, JPT:0.95;0.861, YRI:0.939;0.709 FUNCTIONAL_SNP rs2889896 chr3 188102716 Intron 5b 9838 CEU:1.0;0.96, CHB:0.944;0.769, JPT:0.886;0.647 FUNCTIONAL_SNP rs2030517 chr3 188101703 Intron 5b 10851 CEU:1.0;0.888, CHB:1.0;0.686, JPT:1.0;0.679 FUNCTIONAL_SNP rs6780858 chr3 188132110 Intron 5b 19556 CEU:1.0;0.854, CHB:1.0;0.87, JPT:1.0;0.866 FUNCTIONAL_SNP rs13093110 chr3 188125120 Intron 5b 12566 CEU:1.0;0.961, CHB:1.0;0.955, JPT:1.0;0.953, YRI:0.937;0.64 FUNCTIONAL_SNP rs1915930 chr3 188100256 Intron 6 12298 CEU:1.0;0.818, CHB:1.0;0.708, JPT:1.0;0.672 FUNCTIONAL_SNP rs12485704 chr3 188109766 Intron 7 2788 CEU:1.0;0.96, CHB:0.897;0.768, JPT:0.937;0.783 FUNCTIONAL_SNP rs13076312 chr3 188089254 Intron 7 23300 CEU:1.0;0.961, CHB:0.944;0.74, JPT:0.886;0.647 FUNCTIONAL_SNP rs1474275 chr3 188099420 Intron 7 13134 CEU:1.0;0.818, CHB:1.0;0.686, JPT:1.0;0.679, YRI:0.932;0.504 FUNCTIONAL_SNP rs9864529 chr3 188105056 Intron 7 7498 CEU:1.0;0.821, CHB:0.944;0.74, JPT:0.886;0.647 FUNCTIONAL_SNP rs13079741 chr3 188101861 Intron 7 10693 CEU:1.0;0.924, CHB:0.944;0.74, JPT:0.886;0.647 LEAD_SNP rs1152846 chr3 188420897 Intron 7 ASSOCIATION 19851299 Body mass index 5.52287874528 LPP ASSOCIATION 19851299 Weight 5.22184874962 LPP FUNCTIONAL_SNP rs4686491 chr3 188398655 Intron 7 22242 CEU:1.0;1.0, JPT:1.0;0.681 LEAD_SNP rs7610017 chr3 189343424 Intergenic 5a ASSOCIATION 20100581 Brain imaging 0 - LEAD_SNP rs4488809 chr3 189356261 Intron 5b ASSOCIATION 21725308 Lung cancer 25.15490196 TP63 FUNCTIONAL_SNP rs7636839 chr3 189356941 Intron 6 680 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 LEAD_SNP rs10937405 chr3 189383183 Intron 5b ASSOCIATION 20871597 Lung adenocarcinoma 11.15490196 TP63 FUNCTIONAL_SNP rs9332461 chr3 189341790 Intergenic 5b 41393 CEU:0.956;0.876, CHB:1.0;1.0, JPT:1.0;0.901, YRI:0.915;0.803 FUNCTIONAL_SNP rs4396880 chr3 189356221 Intron 5b 26962 CEU:0.956;0.876, CHB:1.0;1.0, JPT:0.947;0.896, YRI:0.916;0.839 FUNCTIONAL_SNP rs2378507 chr3 189383538 Intron 6 355 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4011816 chr3 189388865 Intron 6 5682 CEU:0.954;0.871, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.918 FUNCTIONAL_SNP rs4398410 chr3 189344011 Intergenic 6 39172 CEU:0.956;0.876, CHB:1.0;1.0, JPT:1.0;0.901, YRI:0.915;0.803 FUNCTIONAL_SNP rs4362700 chr3 189376305 Intron 7 6878 CEU:0.956;0.876, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.918 FUNCTIONAL_SNP rs9985415 chr3 189385947 Intron 7 2764 CEU:1.0;0.913, CHB:1.0;0.939, JPT:1.0;0.946, YRI:1.0;0.903 LEAD_SNP rs710521 chr3 189645933 Intergenic 6 ASSOCIATION 20972438 Bladder cancer 9.69897000434 TP63 - LEPREL1 ASSOCIATION 20348956 Urinary bladder cancer 7.22184874962 TP63 - LEPREL1 ASSOCIATION 18794855 Urinary bladder cancer 7.0 TP63 - LEPREL1 FUNCTIONAL_SNP rs4687104 chr3 189632900 Intergenic 2b 13033 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.881, YRI:1.0;0.829 FUNCTIONAL_SNP rs4687102 chr3 189616542 Intergenic 2b 29391 CEU:1.0;0.916, CHB:1.0;0.926, JPT:0.933;0.818 FUNCTIONAL_SNP rs4687103 chr3 189632664 Intergenic 4 13269 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.881, YRI:1.0;0.829 FUNCTIONAL_SNP rs1543969 chr3 189599674 Intron 5b 46259 CEU:1.0;0.813, CHB:1.0;0.933, JPT:0.865;0.748 FUNCTIONAL_SNP rs7628595 chr3 189618496 Intergenic 5b 27437 CEU:1.0;0.92, CHB:1.0;0.933, JPT:0.934;0.82 FUNCTIONAL_SNP rs4479569 chr3 189631932 Intergenic 5b 14001 CEU:1.0;1.0, CHB:1.0;0.927, JPT:1.0;0.86, YRI:1.0;0.554 FUNCTIONAL_SNP rs12491886 chr3 189637587 Intergenic 6 8346 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;0.939, YRI:1.0;0.568 FUNCTIONAL_SNP rs1447931 chr3 189631559 Intergenic 6 14374 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.881, YRI:1.0;0.829 FUNCTIONAL_SNP rs12493699 chr3 189630439 Intergenic 7 15494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.881, YRI:1.0;0.585 FUNCTIONAL_SNP rs12490406 chr3 189630649 Intergenic 7 15284 CEU:0.95;0.859, CHB:1.0;1.0, JPT:1.0;0.865 FUNCTIONAL_SNP rs11706540 chr3 189641053 Intergenic 7 4880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.881 FUNCTIONAL_SNP rs17514925 chr3 189617549 Intergenic 7 28384 CEU:1.0;0.959, CHB:1.0;0.933, JPT:0.934;0.82, YRI:0.821;0.572 FUNCTIONAL_SNP rs4687100 chr3 189611026 Intron 7 34907 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.824 LEAD_SNP rs16865258 chr3 189997396 Intergenic 5b ASSOCIATION 21107309 Working memory 5.69897000434 LEPREL1 - CLDN1 LEAD_SNP rs9290936 chr3 190252635 Intron 5b ASSOCIATION 20966902 Waist circumference 5.39794000867 IL1RAP LEAD_SNP rs7626795 chr3 190350461 Intron 7 ASSOCIATION 18385676 Lung cancer 5.09691001301 IL1RAP FUNCTIONAL_SNP rs7629377 chr3 190350965 Intron 6 504 CEU:0.911;0.83, CHB:1.0;0.925, JPT:1.0;1.0, YRI:1.0;0.916 LEAD_SNP rs10937470 chr3 191000808 Intron 4 ASSOCIATION 21116278 Total ventricular volume 5.04575749056 UTS2D FUNCTIONAL_SNP rs6788319 chr3 190999917 Coding 6 891 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7645540 chr3 191000322 Intron 3a 486 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10937468 chr3 191000349 Intron 4 459 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6444533 chr3 190999790 Intron 6 1018 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4687207 chr3 190998437 Intron 6 2371 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.86, YRI:1.0;0.854 FUNCTIONAL_SNP rs6444532 chr3 190999760 Intron 6 1048 CEU:1.0;0.833, CHB:1.0;0.952, JPT:0.939;0.832 FUNCTIONAL_SNP rs6802677 chr3 190995351 Intron 6 5457 CEU:0.954;0.8, CHB:1.0;0.866, JPT:1.0;0.948 FUNCTIONAL_SNP rs6788097 chr3 190999702 Intron 7 1106 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2603670 chr3 191006224 Intron 7 5416 CEU:0.957;0.916, CHB:1.0;0.897, JPT:1.0;0.849, YRI:1.0;1.0 FUNCTIONAL_SNP rs12486011 chr3 190995618 Intron 7 5190 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;0.953 LEAD_SNP rs7635839 chr3 191667777 Intergenic 5b ASSOCIATION 19721433 Response to antipsychotic treatment 5.52287874528 PYDC2 - FGF12 FUNCTIONAL_SNP rs9837908 chr3 191672824 Intergenic 6 5047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 LEAD_SNP rs975121 chr3 191897218 Intron 6 ASSOCIATION 21139019 Ileal carcinoids 5.15490195999 FGF12 LEAD_SNP rs4453795 chr3 192093975 Intron 7 ASSOCIATION 19043545 Serum metabolites 6.39794000867 FGF12 LEAD_SNP rs789852 chr3 194327098 Intron 4 ASSOCIATION 20031603 QT interval 6.15490195999 TMEM44 FUNCTIONAL_SNP rs1773184 chr3 194313832 Intron 4 13266 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6437391 chr3 194316826 Intron 5b 10272 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs789850 chr3 194325496 Intron 5b 1602 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;0.758, YRI:1.0;1.0 FUNCTIONAL_SNP rs789855 chr3 194329272 Intron 5b 2174 CEU:1.0;0.879 FUNCTIONAL_SNP rs708632 chr3 194325325 Intron 7 1773 CEU:1.0;1.0, CHB:1.0;0.658, JPT:1.0;0.638, YRI:1.0;0.825 FUNCTIONAL_SNP rs9288751 chr3 194316294 Intron 7 10804 CEU:1.0;0.879, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs1773176 chr3 194316238 Intron 7 10860 CEU:1.0;0.879, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs1773177 chr3 194316181 Intron 7 10917 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3892715 chr3 194758010 Intergenic 5b ASSOCIATION 18937294 Attention deficit hyperactivity disorder (time to onset) 5.22184874962 FAM43A - C3orf21 LEAD_SNP rs2131877 chr3 194858374 Intron 5b ASSOCIATION 20876614 Non-small cell lung cancer 7.69897000434 C3orf21 LEAD_SNP rs9859260 chr3 195800547 Intron 4 ASSOCIATION 19862010 Mean corpuscular volume 13.096910013 TFRC FUNCTIONAL_SNP rs2300780 chr3 195790291 Exon,non-coding 5a 10256 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs406271 chr3 195776976 Exon,non-coding 4 23571 CEU:1.0;0.838 FUNCTIONAL_SNP rs3804139 chr3 195807625 Intron 2b 7078 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs3761717 chr3 195797947 Intron 4 2600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3933 chr3 195784997 Intron 4 15550 CEU:1.0;0.838 FUNCTIONAL_SNP rs13072608 chr3 195800267 Intron 4 280 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9859401 chr3 195800603 Intron 5a 56 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2284890 chr3 195788147 Intron 5a 12400 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs9858727 chr3 195794241 Intron 5b 6306 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.941 FUNCTIONAL_SNP rs9846149 chr3 195787308 Intron 6 13239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.934, YRI:1.0;1.0 FUNCTIONAL_SNP rs11185506 chr3 195797576 Intron 6 2971 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs557527 chr3 195780709 Intron 7 19838 CEU:1.0;0.841 FUNCTIONAL_SNP rs2284889 chr3 195788247 Intron 7 12300 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs2300774 chr3 195793712 Intron 7 6835 CEU:1.0;0.958, CHB:1.0;0.752, JPT:1.0;1.0, YRI:1.0;0.859 LEAD_SNP rs11915082 chr3 195809139 Intergenic 4 ASSOCIATION 19862010 Mean corpuscular hemoglobin 12.096910013 TFRC FUNCTIONAL_SNP rs3326 chr3 195781506 Intron 5a 27633 CEU:1.0;0.811, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs12632706 chr3 195815594 Intergenic 6 6455 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.731, YRI:0.921;0.788 FUNCTIONAL_SNP rs555412 chr3 195804918 Intron 7 4221 CEU:1.0;0.813, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs12631246 chr3 195821584 Intergenic 7 12445 CEU:1.0;0.96, CHB:1.0;0.864, JPT:1.0;1.0, YRI:0.812;0.66 LEAD_SNP rs11924930 chr3 195928854 Intron 6 ASSOCIATION 21160409 HIV-1 susceptibility 5.15490195999 ZDHHC19 LEAD_SNP rs2084385 chr3 196553867 Intron 6 ASSOCIATION 21116278 Total ventricular volume 5.30102999566 PAK2 FUNCTIONAL_SNP rs2084386 chr3 196554020 Intron 7 153 CEU:1.0;1.0, YRI:1.0;0.928 LEAD_SNP rs1564282 chr4 852313 Intron 5b ASSOCIATION 18985386 Parkinson's disease (familial) 6.15490195999 GAK LEAD_SNP rs11248051 chr4 858332 Intron 5b ASSOCIATION 20711177 Parkinson's disease 8.52287874528 GAK FUNCTIONAL_SNP rs2279181 chr4 882643 Coding 5b 24311 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.738 FUNCTIONAL_SNP rs4583705 chr4 973036 Exon,non-coding 4 114704 CEU:1.0;0.838, JPT:0.812;0.66 FUNCTIONAL_SNP rs748483 chr4 952409 Exon,non-coding 5b 94077 CEU:1.0;0.913, JPT:0.812;0.66 FUNCTIONAL_SNP rs3775122 chr4 893287 Intron 5b 34955 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs9994159 chr4 891150 Intron 5b 32818 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs11731387 chr4 851357 Intron 5b 6975 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11248060 chr4 964359 Intron 5b 106027 CEU:1.0;0.838, JPT:0.812;0.66 FUNCTIONAL_SNP rs10516158 chr4 942439 Intron 5b 84107 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.91 FUNCTIONAL_SNP rs11730111 chr4 942833 Intron 5b 84501 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.895 FUNCTIONAL_SNP rs17783233 chr4 976598 Intron 5b 118266 CEU:1.0;0.827, JPT:0.812;0.66 FUNCTIONAL_SNP rs11248059 chr4 960331 Intron 5b 101999 CEU:1.0;0.913, JPT:0.812;0.66 FUNCTIONAL_SNP rs1564282 chr4 852313 Intron 5b 6019 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17781499 chr4 889384 Intron 5b 31052 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs12651368 chr4 856787 Intron 7 1545 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs6599388 chr4 939087 Intron 5b ASSOCIATION 21292315 Parkinson's disease 11.3979400087 TMEM175 LEAD_SNP rs6599389 chr4 939113 Intron 5b ASSOCIATION 21738487 Parkinson's disease 7.39794000867 TMEM175 LEAD_SNP rs11248060 chr4 964359 Intron 5b ASSOCIATION 20070850 Parkinson's disease 5.69897000434 DGKQ FUNCTIONAL_SNP rs2279181 chr4 882643 Coding 5b 81716 CEU:1.0;0.838 FUNCTIONAL_SNP rs748483 chr4 952409 Exon,non-coding 5b 11950 CEU:1.0;0.918, CHB:1.0;0.823, JPT:1.0;1.0 FUNCTIONAL_SNP rs4583705 chr4 973036 Exon,non-coding 4 8677 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11729777 chr4 989548 Intron 4 25189 CEU:1.0;0.918, CHB:1.0;0.79, JPT:1.0;0.738 FUNCTIONAL_SNP rs11731387 chr4 851357 Intron 5b 113002 CEU:1.0;0.838, JPT:0.812;0.66 FUNCTIONAL_SNP rs3775122 chr4 893287 Intron 5b 71072 CEU:1.0;0.838, JPT:0.812;0.66 FUNCTIONAL_SNP rs11248051 chr4 858332 Intron 5b 106027 CEU:1.0;0.838, JPT:0.812;0.66 FUNCTIONAL_SNP rs17783233 chr4 976598 Intron 5b 12239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1564282 chr4 852313 Intron 5b 112046 CEU:1.0;0.838, JPT:0.812;0.66 FUNCTIONAL_SNP rs9994159 chr4 891150 Intron 5b 73209 CEU:1.0;0.838, JPT:0.812;0.66 FUNCTIONAL_SNP rs11248059 chr4 960331 Intron 5b 4028 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10516158 chr4 942439 Intron 5b 21920 CEU:1.0;0.838, JPT:0.898;0.734 FUNCTIONAL_SNP rs11730111 chr4 942833 Intron 5b 21526 CEU:1.0;0.836, JPT:0.879;0.692 FUNCTIONAL_SNP rs12651368 chr4 856787 Intron 7 107572 CEU:1.0;0.838, JPT:0.897;0.732 LEAD_SNP rs1670533 chr4 1078187 Intron 6 ASSOCIATION 18239089 Recombination rate (females) 11.6989700043 RNF212 FUNCTIONAL_SNP rs1670534 chr4 1087265 Coding 4 9078 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2045065 chr4 1052488 Intergenic 2b 25699 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;0.903, YRI:1.0;1.0 FUNCTIONAL_SNP rs629260 chr4 1086764 Intron 4 8577 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs610218 chr4 1080083 Intron 5b 1896 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9992925 chr4 1050909 Intergenic 5b 27278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7673898 chr4 1056569 Intergenic 5b 21618 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6812596 chr4 1069866 Intron 5b 8321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2100411 chr4 1074412 Intron 5b 3775 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7679432 chr4 1050521 Intergenic 5b 27666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10902752 chr4 1056199 Intergenic 5b 21988 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2290408 chr4 1067267 Intron 5b 10920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6852850 chr4 1052857 Intergenic 5b 25330 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6839931 chr4 1053172 Intergenic 5b 25015 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6812586 chr4 1069851 Intron 5b 8336 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4690214 chr4 1054636 Intergenic 6 23551 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6857085 chr4 1095920 Intron 6 17733 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3796620 chr4 1095079 Intron 6 16892 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4690212 chr4 1054898 Intergenic 6 23289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7685541 chr4 1058501 Intergenic 6 19686 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6599278 chr4 1058798 Intergenic 7 19389 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13135215 chr4 1054364 Intergenic 7 23823 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs652063 chr4 1084137 Intron 7 5950 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13107058 chr4 1054379 Intergenic 7 23808 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6827206 chr4 1065071 Intergenic 7 13116 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6599276 chr4 1056827 Intergenic 7 21360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2014318 chr4 1068778 Intron 7 9409 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7669622 chr4 1058659 Intergenic 7 19528 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3796619 chr4 1095281 Intron 5b ASSOCIATION 18239089 Recombination rate (males) 23.5228787453 RNF212 FUNCTIONAL_SNP rs2290409 chr4 1067249 Intron 5b 28032 CEU:1.0;1.0, CHB:0.927;0.802, JPT:1.0;0.817, YRI:1.0;1.0 FUNCTIONAL_SNP rs1466215 chr4 1072220 Intron 6 23061 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4974601 chr4 1095410 Intron 7 129 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13118159 chr4 1365127 Intron 5b ASSOCIATION 20834067 Longevity 6.0 KIAA1530 LEAD_SNP rs798766 chr4 1734239 Intron 6 ASSOCIATION 20972438 Bladder cancer 12.3979400087 TACC3 ASSOCIATION 20348956 Urinary bladder cancer 11.0 TACC3 FUNCTIONAL_SNP rs2236786 chr4 1719294 Coding 5b 14945 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs798726 chr4 1685211 Exon,non-coding 5b 49028 CEU:0.935;0.875, CHB:1.0;0.697, JPT:0.837;0.649 FUNCTIONAL_SNP rs8389 chr4 1746844 Exon,non-coding 5b 12605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs798727 chr4 1685137 Intron 2a 49102 CEU:0.934;0.819, JPT:0.849;0.72 FUNCTIONAL_SNP rs798744 chr4 1714684 Intergenic 2b 19555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.941;0.563 FUNCTIONAL_SNP rs798751 chr4 1719572 Intron 4 14667 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs798754 chr4 1720757 Intron 4 13482 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs798755 chr4 1720824 Intron 4 13415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1665366 chr4 1728381 Intron 4 5858 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3752749 chr4 1737262 Intron 5b 3023 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4865463 chr4 1742400 Intron 5b 8161 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2166580 chr4 1743169 Intron 5b 8930 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs732754 chr4 1762287 Intergenic 5b 28048 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.868 FUNCTIONAL_SNP rs3099555 chr4 1725651 Intron 5b 8588 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1665364 chr4 1727206 Intron 5b 7033 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs744658 chr4 1755074 Intergenic 5b 20835 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs798719 chr4 1698183 Intron 5b 36056 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.611 FUNCTIONAL_SNP rs798741 chr4 1712413 Intron 6 21826 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs798756 chr4 1707447 Intron 6 26792 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs811316 chr4 1689377 Intergenic 6 44862 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;0.868 LEAD_SNP rs2008242 chr4 5221538 Intron 4 ASSOCIATION 19389651 Electrocardiographic conduction measures 5.52287874528 STK32B LEAD_SNP rs4689388 chr4 6270056 Intergenic 4 ASSOCIATION 19734900 Type 2 diabetes and other traits 8.0 WFS1 FUNCTIONAL_SNP rs1046314 chr4 6303955 Coding 5b 33899 CEU:0.948;0.817, CHB:1.0;0.741 FUNCTIONAL_SNP rs734312 chr4 6303354 Coding 5b 33298 CEU:0.949;0.859 FUNCTIONAL_SNP rs1801206 chr4 6302707 Coding 5b 32651 CEU:0.949;0.859, CHB:1.0;0.741 FUNCTIONAL_SNP rs1801214 chr4 6303022 Coding 5b 32966 CEU:1.0;0.951, CHB:1.0;1.0 FUNCTIONAL_SNP rs3200 chr4 6304878 Exon,non-coding 5b 34822 CEU:0.947;0.852, CHB:1.0;0.741 FUNCTIONAL_SNP rs1046320 chr4 6304344 Exon,non-coding 5b 34288 CEU:1.0;0.952, CHB:1.0;0.586 FUNCTIONAL_SNP rs13108780 chr4 6294630 Intron 2b 24574 CEU:1.0;1.0, CHB:1.0;0.585 FUNCTIONAL_SNP rs5018648 chr4 6292818 Intron 2b 22762 CEU:1.0;0.949, CHB:1.0;1.0 FUNCTIONAL_SNP rs10026334 chr4 6294607 Intron 2b 24551 CEU:1.0;0.883 FUNCTIONAL_SNP rs12649341 chr4 6294759 Intron 2b 24703 CEU:1.0;0.951, CHB:1.0;0.741 FUNCTIONAL_SNP rs5018647 chr4 6292799 Intron 4 22743 CEU:1.0;0.95, CHB:1.0;1.0 FUNCTIONAL_SNP rs13107806 chr4 6271071 Intergenic 4 1015 CEU:1.0;0.952, CHB:1.0;0.741 FUNCTIONAL_SNP rs4320200 chr4 6271043 Intergenic 4 987 CEU:1.0;0.952, CHB:1.0;0.741 FUNCTIONAL_SNP rs11732178 chr4 6292643 Intron 4 22587 CEU:0.948;0.9, CHB:1.0;0.741 FUNCTIONAL_SNP rs4689391 chr4 6280449 Intron 4 10393 CEU:0.95;0.903, CHB:1.0;0.741 FUNCTIONAL_SNP rs12508672 chr4 6287965 Intron 5b 17909 CEU:1.0;0.941, CHB:1.0;1.0 FUNCTIONAL_SNP rs4481292 chr4 6298375 Intron 5b 28319 CEU:0.949;0.859, CHB:1.0;0.741 FUNCTIONAL_SNP rs6446480 chr4 6295565 Intron 5b 25509 CEU:1.0;0.951, CHB:1.0;0.741 FUNCTIONAL_SNP rs6446482 chr4 6295693 Intron 5b 25637 CEU:1.0;0.904, CHB:1.0;0.741 FUNCTIONAL_SNP rs10010131 chr4 6292915 Intron 5b 22859 CEU:1.0;0.951, CHB:1.0;0.586 FUNCTIONAL_SNP rs4458523 chr4 6289986 Intron 5b 19930 CEU:1.0;0.951, CHB:1.0;0.741 FUNCTIONAL_SNP rs3889821 chr4 6282596 Intron 5b 12540 CEU:0.95;0.903, CHB:1.0;0.741 FUNCTIONAL_SNP rs4247202 chr4 6264968 Intergenic 5b 5088 CEU:0.946;0.809 FUNCTIONAL_SNP rs4416547 chr4 6293967 Intron 5b 23911 CEU:1.0;0.951, CHB:1.0;0.741 FUNCTIONAL_SNP rs13101355 chr4 6293446 Intron 5b 23390 CEU:1.0;1.0, CHB:1.0;0.658 FUNCTIONAL_SNP rs10937718 chr4 6295217 Intron 5b 25161 CEU:1.0;0.95, CHB:1.0;0.659 FUNCTIONAL_SNP rs13103357 chr4 6294544 Intron 5b 24488 CEU:1.0;0.95 FUNCTIONAL_SNP rs4467645 chr4 6294305 Intron 5b 24249 CEU:1.0;0.948, CHB:1.0;0.741 FUNCTIONAL_SNP rs10937717 chr4 6295087 Intron 5b 25031 CEU:1.0;1.0, CHB:1.0;0.658 FUNCTIONAL_SNP rs10012946 chr4 6293350 Intron 5b 23294 CEU:1.0;0.951, CHB:1.0;0.741 FUNCTIONAL_SNP rs4308429 chr4 6294001 Intron 5b 23945 CEU:1.0;0.947, CHB:1.0;0.741 FUNCTIONAL_SNP rs4689394 chr4 6291003 Intron 5b 20947 CEU:1.0;0.951, CHB:1.0;1.0 FUNCTIONAL_SNP rs752854 chr4 6281961 Intron 5b 11905 CEU:1.0;0.813 FUNCTIONAL_SNP rs4293850 chr4 6292020 Intron 5b 21964 CEU:1.0;0.951, CHB:1.0;1.0 FUNCTIONAL_SNP rs4688987 chr4 6287329 Intron 5b 17273 CEU:0.95;0.903, CHB:1.0;1.0 FUNCTIONAL_SNP rs13130845 chr4 6297646 Intron 5b 27590 CEU:0.95;0.903, CHB:1.0;0.658 FUNCTIONAL_SNP rs13128674 chr4 6294517 Intron 5b 24461 CEU:1.0;0.942, CHB:1.0;1.0 FUNCTIONAL_SNP rs6820509 chr4 6295750 Intron 5b 25694 CEU:1.0;0.804 FUNCTIONAL_SNP rs4580722 chr4 6306144 Intergenic 5b 36088 CEU:0.948;0.817, CHB:1.0;0.741 FUNCTIONAL_SNP rs4689397 chr4 6299387 Intron 5b 29331 CEU:0.949;0.858, CHB:1.0;0.74 FUNCTIONAL_SNP rs3821943 chr4 6299940 Intron 5b 29884 CEU:0.948;0.817 FUNCTIONAL_SNP rs10937720 chr4 6295451 Intron 5b 25395 CEU:1.0;0.951, CHB:1.0;0.741 FUNCTIONAL_SNP rs10937721 chr4 6306763 Intergenic 5b 36707 CEU:0.95;0.903, CHB:1.0;0.741 FUNCTIONAL_SNP rs4688986 chr4 6285797 Intron 6 15741 CEU:0.95;0.903, CHB:1.0;0.741 FUNCTIONAL_SNP rs4688982 chr4 6267001 Intergenic 7 3055 CEU:1.0;0.952, CHB:1.0;0.741 LEAD_SNP rs1801214 chr4 6303022 Coding 5b ASSOCIATION 20581827 Type 2 diabetes 7.52287874528 WFS1 FUNCTIONAL_SNP rs1046314 chr4 6303955 Coding 5b 933 CEU:1.0;0.864, CHB:1.0;0.741, YRI:1.0;0.563 FUNCTIONAL_SNP rs734312 chr4 6303354 Coding 5b 332 CEU:1.0;0.906 FUNCTIONAL_SNP rs1801206 chr4 6302707 Coding 5b 315 CEU:1.0;0.906, CHB:1.0;0.741 FUNCTIONAL_SNP rs3200 chr4 6304878 Exon,non-coding 5b 1856 CEU:1.0;0.906, CHB:1.0;0.741 FUNCTIONAL_SNP rs1046320 chr4 6304344 Exon,non-coding 5b 1322 CEU:1.0;0.906, CHB:1.0;0.586 FUNCTIONAL_SNP rs13108780 chr4 6294630 Intron 2b 8392 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs5018648 chr4 6292818 Intron 2b 10204 CEU:1.0;0.949, CHB:1.0;1.0 FUNCTIONAL_SNP rs10026334 chr4 6294607 Intron 2b 8415 CEU:1.0;0.883 FUNCTIONAL_SNP rs12649341 chr4 6294759 Intron 2b 8263 CEU:1.0;1.0, CHB:1.0;0.741 FUNCTIONAL_SNP rs5018647 chr4 6292799 Intron 4 10223 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs13107806 chr4 6271071 Intergenic 4 31951 CEU:1.0;0.906, CHB:1.0;0.741 FUNCTIONAL_SNP rs4320200 chr4 6271043 Intergenic 4 31979 CEU:1.0;0.909, CHB:1.0;0.741 FUNCTIONAL_SNP rs11732178 chr4 6292643 Intron 4 10379 CEU:1.0;0.951, CHB:1.0;0.741 FUNCTIONAL_SNP rs4689388 chr4 6270056 Intergenic 4 32966 CEU:1.0;0.951, CHB:1.0;1.0 FUNCTIONAL_SNP rs4689391 chr4 6280449 Intron 4 22573 CEU:1.0;0.951, CHB:1.0;0.741 FUNCTIONAL_SNP rs12508672 chr4 6287965 Intron 5b 15057 CEU:1.0;1.0, CHB:1.0;1.0, YRI:0.893;0.505 FUNCTIONAL_SNP rs4481292 chr4 6298375 Intron 5b 4647 CEU:1.0;0.906, CHB:1.0;0.741 FUNCTIONAL_SNP rs6446480 chr4 6295565 Intron 5b 7457 CEU:1.0;1.0, CHB:1.0;0.741 FUNCTIONAL_SNP rs6446482 chr4 6295693 Intron 5b 7329 CEU:1.0;0.952, CHB:1.0;0.741 FUNCTIONAL_SNP rs10010131 chr4 6292915 Intron 5b 10107 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs4458523 chr4 6289986 Intron 5b 13036 CEU:1.0;1.0, CHB:1.0;0.741 FUNCTIONAL_SNP rs3889821 chr4 6282596 Intron 5b 20426 CEU:1.0;0.953, CHB:1.0;0.741 FUNCTIONAL_SNP rs4416547 chr4 6293967 Intron 5b 9055 CEU:1.0;1.0, CHB:1.0;0.741 FUNCTIONAL_SNP rs10001190 chr4 6284633 Intron 5b 18389 CEU:0.944;0.804 FUNCTIONAL_SNP rs13101355 chr4 6293446 Intron 5b 9576 CEU:1.0;1.0, CHB:1.0;0.659 FUNCTIONAL_SNP rs10937718 chr4 6295217 Intron 5b 7805 CEU:1.0;1.0, CHB:1.0;0.659 FUNCTIONAL_SNP rs13103357 chr4 6294544 Intron 5b 8478 CEU:1.0;1.0 FUNCTIONAL_SNP rs4467645 chr4 6294305 Intron 5b 8717 CEU:1.0;1.0, CHB:1.0;0.741 FUNCTIONAL_SNP rs10937717 chr4 6295087 Intron 5b 7935 CEU:1.0;1.0, CHB:1.0;0.659 FUNCTIONAL_SNP rs10012946 chr4 6293350 Intron 5b 9672 CEU:1.0;1.0, CHB:1.0;0.741 FUNCTIONAL_SNP rs4308429 chr4 6294001 Intron 5b 9021 CEU:1.0;1.0, CHB:1.0;0.741 FUNCTIONAL_SNP rs4689394 chr4 6291003 Intron 5b 12019 CEU:1.0;1.0, CHB:1.0;1.0, YRI:0.805;0.523 FUNCTIONAL_SNP rs752854 chr4 6281961 Intron 5b 21061 CEU:1.0;0.855 FUNCTIONAL_SNP rs4293850 chr4 6292020 Intron 5b 11002 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs4688987 chr4 6287329 Intron 5b 15693 CEU:1.0;0.953, CHB:1.0;1.0 FUNCTIONAL_SNP rs13130845 chr4 6297646 Intron 5b 5376 CEU:1.0;0.953, CHB:1.0;0.659 FUNCTIONAL_SNP rs13128674 chr4 6294517 Intron 5b 8505 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs10937719 chr4 6295322 Intron 5b 7700 CEU:0.945;0.806, CHB:1.0;1.0 FUNCTIONAL_SNP rs6820509 chr4 6295750 Intron 5b 7272 CEU:1.0;0.811 FUNCTIONAL_SNP rs4580722 chr4 6306144 Intergenic 5b 3122 CEU:1.0;0.868, CHB:1.0;0.741 FUNCTIONAL_SNP rs4689397 chr4 6299387 Intron 5b 3635 CEU:1.0;0.868, CHB:1.0;0.741 FUNCTIONAL_SNP rs3821943 chr4 6299940 Intron 5b 3082 CEU:1.0;0.868 FUNCTIONAL_SNP rs10937720 chr4 6295451 Intron 5b 7571 CEU:1.0;1.0, CHB:1.0;0.741 FUNCTIONAL_SNP rs10937721 chr4 6306763 Intergenic 5b 3741 CEU:1.0;0.953, CHB:1.0;0.741 FUNCTIONAL_SNP rs4688986 chr4 6285797 Intron 6 17225 CEU:1.0;0.953, CHB:1.0;0.741 FUNCTIONAL_SNP rs4688982 chr4 6267001 Intergenic 7 36021 CEU:1.0;0.906, CHB:1.0;0.741 LEAD_SNP rs4234798 chr4 7219933 Intron 2b ASSOCIATION 21216879 Insulin-like growth factors 9.30102999566 SORCS2 FUNCTIONAL_SNP rs4234797 chr4 7219907 Intron 2a 26 CEU:1.0;1.0, CHB:1.0;0.789, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4689088 chr4 7222253 Intron 5b 2320 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs10020957 chr4 7222436 Intron 5b 2503 CEU:0.959;0.885 LEAD_SNP rs1949733 chr4 8503359 Intergenic 6 ASSOCIATION 21659360 Response to antineoplastic agents 6.09691001301 C4orf23 - GPR78 FUNCTIONAL_SNP rs3103067 chr4 8511223 Exon,non-coding 5b 7864 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs1880023 chr4 8480831 Exon,non-coding 5b 22528 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs2631731 chr4 8429817 Intron 4 73542 CEU:1.0;0.95, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2688242 chr4 8429943 Intron 4 73416 CEU:1.0;0.942, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1357481 chr4 8496221 Intergenic 5b 7138 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6858542 chr4 8511547 Intron 5b 8188 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.665 FUNCTIONAL_SNP rs2631758 chr4 8495304 Intergenic 5b 8055 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2688223 chr4 8471398 Intron 5b 31961 CEU:1.0;1.0, CHB:1.0;0.826, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs940133 chr4 8473614 Intron 5b 29745 CEU:1.0;1.0, CHB:1.0;0.786, JPT:1.0;0.569, YRI:1.0;0.891 FUNCTIONAL_SNP rs2631740 chr4 8484106 Intron 5b 19253 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs6447875 chr4 8503206 Intergenic 7 153 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs868105 chr4 8501030 Intergenic 7 2329 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1916326 chr4 8500023 Intergenic 7 3336 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2631745 chr4 8490530 Intron 7 12829 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10461079 chr4 8392724 Intron 7 110635 CEU:1.0;0.902, CHB:1.0;1.0, JPT:1.0;0.953 LEAD_SNP rs16890979 chr4 9922167 Coding 7 ASSOCIATION 18834626 Serum urate 167.15490196 SLC2A9 ASSOCIATION 18759275 Serum uric acid 11.0 SLC2A9 LEAD_SNP rs734553 chr4 9923004 Intron 5b ASSOCIATION 19503597 Serum uric acid 41.0 SLC2A9 ASSOCIATION 19503597 Serum uric acid 192.0 SLC2A9 FUNCTIONAL_SNP rs16890979 chr4 9922167 Coding 7 837 CEU:1.0;0.822, JPT:1.0;1.0, YRI:1.0;0.687 FUNCTIONAL_SNP rs938554 chr4 9925692 Exon,non-coding 7 2688 CEU:1.0;0.823, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.687 FUNCTIONAL_SNP rs5028843 chr4 9940806 Intron 4 17802 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs6838021 chr4 9927620 Intron 5b 4616 CEU:1.0;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs12498742 chr4 9944052 Intron 5b 21048 CEU:1.0;0.871, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.923;0.791 FUNCTIONAL_SNP rs4697913 chr4 9941262 Intron 6 18258 CEU:1.0;0.858, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7670751 chr4 9938773 Intron 7 15769 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs938555 chr4 9926051 Intron 7 3047 CEU:1.0;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.687 FUNCTIONAL_SNP rs874432 chr4 9920606 Intron 7 2398 CEU:1.0;0.868, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.687 FUNCTIONAL_SNP rs938564 chr4 9922573 Intron 7 431 CEU:1.0;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6832439 chr4 9924319 Intron 7 1315 CEU:1.0;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.771 FUNCTIONAL_SNP rs6855911 chr4 9935910 Intron 7 12906 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs737267 chr4 9934744 Intron 7 11740 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 LEAD_SNP rs13129697 chr4 9926967 Intron 5b ASSOCIATION 20884846 Serum urate 241.698970004 SLC2A9 ASSOCIATION 20884846 Serum urate 12.3979400087 SLC2A9 ASSOCIATION 19260141 Biochemical measures 9.0 SLC2A9 FUNCTIONAL_SNP rs938558 chr4 9939205 Intron 5b 12238 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.862 FUNCTIONAL_SNP rs7675964 chr4 9941434 Intron 7 14467 CEU:0.958;0.918, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.834 FUNCTIONAL_SNP rs4697701 chr4 9946095 Intron 7 19128 CEU:1.0;0.844, CHB:1.0;0.954, JPT:1.0;0.953, YRI:0.769;0.549 LEAD_SNP rs737267 chr4 9934744 Intron 7 ASSOCIATION 18327257 Serum urate 8.52287874528 SLC2A9 FUNCTIONAL_SNP rs5028843 chr4 9940806 Intron 4 6062 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs12498742 chr4 9944052 Intron 5b 9308 CEU:1.0;0.833, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.892 FUNCTIONAL_SNP rs734553 chr4 9923004 Intron 5b 11740 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs6855911 chr4 9935910 Intron 7 1166 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7670751 chr4 9938773 Intron 7 4029 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6855911 chr4 9935910 Intron 7 ASSOCIATION 17997608 Serum urate 15.6989700043 SLC2A9 FUNCTIONAL_SNP rs5028843 chr4 9940806 Intron 4 4896 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.967 FUNCTIONAL_SNP rs6838021 chr4 9927620 Intron 5b 8290 CEU:1.0;0.802, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.967 FUNCTIONAL_SNP rs12498742 chr4 9944052 Intron 5b 8142 CEU:1.0;0.833, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.892 FUNCTIONAL_SNP rs734553 chr4 9923004 Intron 5b 12906 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs938564 chr4 9922573 Intron 7 13337 CEU:1.0;0.802, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs7670751 chr4 9938773 Intron 7 2863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs737267 chr4 9934744 Intron 7 1166 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7442295 chr4 9966380 Intron 7 ASSOCIATION 18327256 Serum urate 69.5228787453 SLC2A9 ASSOCIATION 18179892 Serum urate 14.6989700043 SLC2A9 FUNCTIONAL_SNP rs13125646 chr4 9982330 Coding 7 15950 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs938554 chr4 9925692 Exon,non-coding 7 40688 CEU:0.944;0.803, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.886 FUNCTIONAL_SNP rs6449173 chr4 9966105 Intron 5b 275 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4475146 chr4 9946656 Intron 5b 19724 CEU:0.945;0.848, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.811 FUNCTIONAL_SNP rs7439210 chr4 9971749 Intron 5b 5369 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4697700 chr4 9945792 Intron 6 20588 CEU:0.947;0.813, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.921;0.848 FUNCTIONAL_SNP rs938555 chr4 9926051 Intron 7 40329 CEU:0.947;0.813, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.886 FUNCTIONAL_SNP rs11942223 chr4 9962765 Intron 7 3615 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3775948 chr4 9995182 Intron 7 ASSOCIATION 21294900 Serum uric acid 9.0 SLC2A9 FUNCTIONAL_SNP rs1014290 chr4 10001861 Intron 5b 6679 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.95, YRI:1.0;0.835 FUNCTIONAL_SNP rs4529048 chr4 9997112 Intron 5b 1930 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.95, YRI:1.0;0.916 FUNCTIONAL_SNP rs3733588 chr4 9997303 Intron 7 2121 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;0.946, YRI:0.948;0.854 LEAD_SNP rs717615 chr4 10104670 Intron 5b ASSOCIATION 21294900 Serum uric acid 5.30102999566 WDR1 FUNCTIONAL_SNP rs3822242 chr4 10094904 Intron 4 9766 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.895 FUNCTIONAL_SNP rs11726271 chr4 10098192 Intron 4 6478 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.855 LEAD_SNP rs9291683 chr4 10324160 Intergenic 7 ASSOCIATION 17903296 Bone mineral density 5.69897000434 RAF1P1 - ZNF518B LEAD_SNP rs10489087 chr4 13794416 Intron 5b ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.30102999566 RPL32P12 - CPEB2 LEAD_SNP rs16891867 chr4 15397364 Intron 7 ASSOCIATION 20585324 Conduct disorder (symptom count) 8.52287874528 C1QTNF7 FUNCTIONAL_SNP rs1861046 chr4 15397906 Intron 4 542 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6837765 chr4 15404241 Intron 7 6877 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.896;0.803 LEAD_SNP rs1861046 chr4 15397906 Intron 4 ASSOCIATION 20585324 Conduct disorder (case status) 7.22184874962 C1QTNF7 FUNCTIONAL_SNP rs6837765 chr4 15404241 Intron 7 6335 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.896;0.803 FUNCTIONAL_SNP rs16891867 chr4 15397364 Intron 7 542 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1861050 chr4 15482360 Coding 7 ASSOCIATION 20585324 Conduct disorder (case status) 5.09691001301 CC2D2A FUNCTIONAL_SNP rs2192362 chr4 15456446 Intergenic 5b 25914 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs4698383 chr4 15460472 Intergenic 6 21888 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10032808 chr4 15443026 Intron 6 39334 CEU:1.0;1.0, CHB:1.0;0.876, JPT:1.0;1.0, YRI:1.0;0.923 LEAD_SNP rs11724635 chr4 15737101 Intergenic 7 ASSOCIATION 21292315 Parkinson's disease 16.0 RPL10AP7 - CD38 FUNCTIONAL_SNP rs3213710 chr4 15717321 Intron 6 19780 CEU:0.958;0.816, CHB:0.935;0.624, JPT:0.936;0.627 FUNCTIONAL_SNP rs4698412 chr4 15737348 Intergenic 6 247 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4698413 chr4 15737882 Intergenic 7 781 CEU:1.0;0.927, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4698412 chr4 15737348 Intergenic 6 ASSOCIATION 21084426 Parkinson's disease 5.69897000434 RPL10AP7 - CD38 FUNCTIONAL_SNP rs3213710 chr4 15717321 Intron 6 20027 CEU:0.958;0.816, CHB:0.937;0.63, JPT:0.936;0.627 FUNCTIONAL_SNP rs4698413 chr4 15737882 Intergenic 7 534 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11724635 chr4 15737101 Intergenic 7 247 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4538475 chr4 15737937 Intergenic 7 ASSOCIATION 19915576 Parkinson's disease 8.52287874528 RPL10AP7 - CD38 FUNCTIONAL_SNP rs4273468 chr4 15737863 Intergenic 6 74 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17478107 chr4 16002288 Intron 6 ASSOCIATION 20707712 Self-rated health 5.04575749056 PROM1 LEAD_SNP rs7678436 chr4 17797966 Intergenic 7 ASSOCIATION 20189936 Height 14.096910013 FAM184B - DCAF16 LEAD_SNP rs16896068 chr4 17944840 Intron 7 ASSOCIATION 18391952 Height 12.6989700043 LCORL FUNCTIONAL_SNP rs11945359 chr4 17960008 Intron 5b 15168 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.83 FUNCTIONAL_SNP rs6853216 chr4 17970655 Intron 6 25815 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:0.961;0.859 FUNCTIONAL_SNP rs4057984 chr4 17957200 Intron 6 12360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.83 FUNCTIONAL_SNP rs7695840 chr4 17962379 Intron 6 17539 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.83 FUNCTIONAL_SNP rs11933767 chr4 17967896 Intron 7 23056 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.828 FUNCTIONAL_SNP rs6449349 chr4 17952609 Intron 7 7769 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.83 FUNCTIONAL_SNP rs7684221 chr4 17957354 Intron 7 12514 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.83 FUNCTIONAL_SNP rs6845078 chr4 17952208 Intron 7 7368 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs6449353 chr4 18033488 Intergenic 7 88648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.827 FUNCTIONAL_SNP rs2085683 chr4 18007435 Intron 7 62595 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.83 FUNCTIONAL_SNP rs7686082 chr4 17957576 Intron 7 12736 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 LEAD_SNP rs6830062 chr4 18017730 Intron 5a ASSOCIATION 20397748 Height 5.09691001301 LCORL ASSOCIATION 19343178 Height 8.30102999566 LCORL ASSOCIATION 18391951 Height 10.0 LCORL FUNCTIONAL_SNP rs1380294 chr4 18024121 Intergenic 2b 6391 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6837666 chr4 17855912 Intron 4 161818 CEU:1.0;0.855, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs6817306 chr4 17868058 Intron 5b 149672 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12501035 chr4 17976326 Intron 5b 41404 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.8 FUNCTIONAL_SNP rs2061455 chr4 18035250 Intergenic 5b 17520 CEU:1.0;1.0, CHB:1.0;0.888, YRI:0.846;0.689 FUNCTIONAL_SNP rs6824748 chr4 17997066 Intron 5b 20664 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10516315 chr4 18016877 Intron 5b 853 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11945359 chr4 17960008 Intron 5b 57722 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.856 FUNCTIONAL_SNP rs11931594 chr4 17833547 Intron 6 184183 CEU:1.0;0.846 FUNCTIONAL_SNP rs6853216 chr4 17970655 Intron 6 47075 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:0.958;0.764 FUNCTIONAL_SNP rs13152352 chr4 17976846 Intron 6 40884 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.822 FUNCTIONAL_SNP rs11936915 chr4 17948497 Intron 6 69233 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs1585333 chr4 18019025 Intron 6 1295 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6449350 chr4 17977535 Intron 6 40195 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.926 FUNCTIONAL_SNP rs10489039 chr4 17827549 Intron 6 190181 CEU:1.0;0.855 FUNCTIONAL_SNP rs16896210 chr4 17992332 Intron 6 25398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.809;0.655 FUNCTIONAL_SNP rs7698644 chr4 18019572 Intron 6 1842 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13127416 chr4 17976779 Intron 6 40951 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.822 FUNCTIONAL_SNP rs10446630 chr4 17958690 Intron 6 59040 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs4057984 chr4 17957200 Intron 6 60530 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.856 FUNCTIONAL_SNP rs16895888 chr4 17853921 Intron 6 163809 CEU:1.0;0.854 FUNCTIONAL_SNP rs7695840 chr4 17962379 Intron 6 55351 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.856 FUNCTIONAL_SNP rs6840334 chr4 17984277 Intron 7 33453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.827 FUNCTIONAL_SNP rs6840868 chr4 17939331 Intron 7 78399 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs16896068 chr4 17944840 Intron 7 72890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.879;0.692 FUNCTIONAL_SNP rs11933767 chr4 17967896 Intron 7 49834 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.854 FUNCTIONAL_SNP rs11945055 chr4 17854588 Intron 7 163142 CEU:1.0;0.855, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs6449349 chr4 17952609 Intron 7 65121 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.856 FUNCTIONAL_SNP rs6854757 chr4 17932555 Intron 7 85175 CEU:1.0;0.868, CHB:1.0;0.888, JPT:1.0;1.0, YRI:0.959;0.822 FUNCTIONAL_SNP rs7684221 chr4 17957354 Intron 7 60376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.856 FUNCTIONAL_SNP rs16896128 chr4 17953590 Intron 7 64140 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6845078 chr4 17952208 Intron 7 65522 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.842;0.658 FUNCTIONAL_SNP rs1585334 chr4 18018944 Intron 7 1214 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6854334 chr4 17861210 Intron 7 156520 CEU:1.0;0.855, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs6449345 chr4 17934394 Intron 7 83336 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.813 FUNCTIONAL_SNP rs7692995 chr4 17936634 Intron 7 81096 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.946;0.681 FUNCTIONAL_SNP rs7668933 chr4 17988141 Intron 7 29589 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.809;0.655 FUNCTIONAL_SNP rs6449353 chr4 18033488 Intergenic 7 15758 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs7663818 chr4 17936443 Intron 7 81287 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.658, YRI:0.956;0.726 FUNCTIONAL_SNP rs16896215 chr4 17995312 Intron 7 22418 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16896236 chr4 18003812 Intron 7 13918 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs2302210 chr4 17838536 Intron 7 179194 CEU:1.0;0.855 FUNCTIONAL_SNP rs7663887 chr4 17902920 Intron 7 114810 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6821168 chr4 18005019 Intron 7 12711 CEU:1.0;0.905, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2085683 chr4 18007435 Intron 7 10295 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.856 FUNCTIONAL_SNP rs13116230 chr4 18004014 Intron 7 13716 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1472852 chr4 17910236 Intron 7 107494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2125654 chr4 18025368 Intergenic 7 7638 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7698271 chr4 18019413 Intron 7 1683 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12513171 chr4 17997541 Intron 7 20189 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12503997 chr4 17948089 Intron 7 69641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs7686082 chr4 17957576 Intron 7 60154 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.838;0.65 FUNCTIONAL_SNP rs2286535 chr4 17841848 Intron 7 175882 CEU:1.0;0.855, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs6820810 chr4 17866325 Intron 7 151405 CEU:1.0;0.855, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs7694806 chr4 18029100 Intergenic 7 11370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.856 FUNCTIONAL_SNP rs11938781 chr4 17924734 Intron 7 92996 CEU:1.0;0.868, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11936911 chr4 17948668 Intron 7 69062 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6831102 chr4 18018236 Intron 7 506 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs666088 chr4 20495135 Intron 7 ASSOCIATION 17903301 Echocardiographic traits 5.30102999566 SLIT2 FUNCTIONAL_SNP rs522501 chr4 20497277 Intron 5b 2142 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs490478 chr4 20498484 Intron 6 3349 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;0.822, YRI:1.0;1.0 FUNCTIONAL_SNP rs531297 chr4 20494857 Intron 7 278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6810790 chr4 20515670 Intron 7 20535 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.805 FUNCTIONAL_SNP rs684278 chr4 20487278 Intron 7 7857 CEU:1.0;0.888, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.946 LEAD_SNP rs1379659 chr4 20620683 Exon,non-coding 7 ASSOCIATION 17903301 Echocardiographic traits 7.0 SLIT2 LEAD_SNP rs358592 chr4 21476990 Intron 6 ASSOCIATION 20877300 Suicidal ideation 5.52287874528 KCNIP4 FUNCTIONAL_SNP rs6813065 chr4 21472076 Intron 5a 4914 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6855589 chr4 21471568 Intron 5a 5422 CEU:1.0;1.0, JPT:1.0;0.75 FUNCTIONAL_SNP rs358566 chr4 21466544 Intron 5b 10446 CEU:1.0;1.0 FUNCTIONAL_SNP rs358575 chr4 21454727 Intron 5b 22263 CEU:0.953;0.867 FUNCTIONAL_SNP rs358574 chr4 21455396 Intron 7 21594 CEU:0.953;0.867 FUNCTIONAL_SNP rs16871135 chr4 21482743 Intron 7 5753 CEU:1.0;0.911, JPT:0.942;0.698 FUNCTIONAL_SNP rs358581 chr4 21487844 Intron 7 10854 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;0.818 FUNCTIONAL_SNP rs358582 chr4 21486166 Intron 7 9176 CEU:1.0;0.911, CHB:1.0;0.95, JPT:1.0;0.953, YRI:1.0;0.823 FUNCTIONAL_SNP rs358586 chr4 21483411 Intron 7 6421 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.94 FUNCTIONAL_SNP rs358588 chr4 21481537 Intron 7 4547 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs16877106 chr4 25403266 Intron 7 ASSOCIATION 20966902 Weight 6.0 ANAPC4 LEAD_SNP rs3816587 chr4 25417244 Intron 6 ASSOCIATION 17554300 Rheumatoid arthritis 5.04575749056 ANAPC4 LEAD_SNP rs959903 chr4 25810096 Intron 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.15490195999 SEL1L3 LEAD_SNP rs10517086 chr4 26085511 Intergenic 5b ASSOCIATION 19430480 Type 1 diabetes 9.30102999566 C4orf52 - RBPJ LEAD_SNP rs874040 chr4 26108197 Intergenic 2b ASSOCIATION 20453842 Rheumatoid arthritis 16.0 C4orf52 - RBPJ FUNCTIONAL_SNP rs7441808 chr4 26090375 Intergenic 4 17822 CEU:1.0;0.959 FUNCTIONAL_SNP rs7673206 chr4 26126838 Intergenic 4 18641 CEU:1.0;1.0 FUNCTIONAL_SNP rs10517086 chr4 26085511 Intergenic 5b 22686 CEU:1.0;1.0, YRI:0.901;0.653 FUNCTIONAL_SNP rs11933540 chr4 26120001 Intergenic 5b 11804 CEU:1.0;1.0 FUNCTIONAL_SNP rs17630466 chr4 26086569 Intergenic 6 21628 CEU:1.0;1.0, YRI:0.775;0.552 FUNCTIONAL_SNP rs6825116 chr4 26122858 Intergenic 7 14661 CEU:1.0;1.0, YRI:0.947;0.656 FUNCTIONAL_SNP rs6448432 chr4 26098810 Intergenic 7 9387 CEU:1.0;1.0, YRI:1.0;0.841 FUNCTIONAL_SNP rs12506688 chr4 26104113 Intergenic 7 4084 CEU:1.0;1.0, YRI:1.0;0.63 FUNCTIONAL_SNP rs932036 chr4 26090862 Intergenic 7 17335 CEU:1.0;1.0, YRI:1.0;0.722 LEAD_SNP rs4692256 chr4 27744718 Intergenic 7 ASSOCIATION 20100581 Brain imaging 0 - FUNCTIONAL_SNP rs7661697 chr4 27743592 Intergenic 7 1126 CEU:1.0;0.827, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1910409 chr4 27749006 Intergenic 7 4288 CEU:0.954;0.802, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7691536 chr4 27745711 Intergenic 7 993 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs2047845 chr4 27749675 Intergenic 7 4957 CEU:1.0;0.849, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs2047847 chr4 27754761 Intergenic 7 10043 CEU:0.958;0.918, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;0.888 FUNCTIONAL_SNP rs1503466 chr4 27744207 Intergenic 7 511 CEU:1.0;0.849, CHB:1.0;1.0, JPT:1.0;0.95 FUNCTIONAL_SNP rs1503467 chr4 27743084 Intergenic 7 1634 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs7667308 chr4 27743819 Intergenic 7 899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7442317 chr4 29903052 Intergenic 6 ASSOCIATION 21473668 Attention deficit hyperactivity disorder motor coordination 5.39794000867 MESTP3 - RPS3AP17 FUNCTIONAL_SNP rs7668843 chr4 29910656 Intergenic 5a 7604 CEU:0.948;0.898, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.957;0.877 FUNCTIONAL_SNP rs7668862 chr4 29910686 Intergenic 5a 7634 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.8 FUNCTIONAL_SNP rs9790326 chr4 29912513 Intergenic 6 9461 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.854 FUNCTIONAL_SNP rs7668994 chr4 29907546 Intergenic 7 4494 CEU:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs10023178 chr4 29917438 Intergenic 7 14386 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.775 FUNCTIONAL_SNP rs10517190 chr4 29904604 Intergenic 7 1552 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs7690295 chr4 29907337 Intergenic 7 4285 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.814 FUNCTIONAL_SNP rs953797 chr4 29914898 Intergenic 7 11846 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.947;0.896, YRI:1.0;0.833 FUNCTIONAL_SNP rs10517191 chr4 29908001 Intergenic 7 4949 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs1503967 chr4 29906027 Intergenic 7 2975 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.861 FUNCTIONAL_SNP rs7690092 chr4 29907209 Intergenic 7 4157 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;0.864 FUNCTIONAL_SNP rs11941485 chr4 29906980 Intergenic 7 3928 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs16882428 chr4 29903074 Intergenic 7 22 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17390445 chr4 34893855 Intergenic 6 ASSOCIATION 19721433 Response to antipsychotic treatment 7.0 RPL31P31 - ARAP2 FUNCTIONAL_SNP rs1617678 chr4 34883393 Intergenic 6 10462 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs1398050 chr4 34883459 Intergenic 6 10396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs1619506 chr4 34882075 Intergenic 6 11780 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs12501975 chr4 34895037 Intergenic 6 1182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1706215 chr4 34873438 Intergenic 6 20417 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs1620456 chr4 34886565 Intergenic 6 7290 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs1706225 chr4 34884868 Intergenic 6 8987 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs1714924 chr4 34885918 Intergenic 7 7937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs3113627 chr4 34883601 Intergenic 7 10254 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs3113628 chr4 34883729 Intergenic 7 10126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.808 FUNCTIONAL_SNP rs1706224 chr4 34884933 Intergenic 7 8922 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 LEAD_SNP rs437943 chr4 35372098 Intergenic 7 ASSOCIATION 18615156 Response to TNF antagonist treatment 5.39794000867 RPL31P31 - ARAP2 LEAD_SNP rs1533317 chr4 35410631 Intergenic 7 ASSOCIATION 20031603 QT interval 5.69897000434 RPL31P31 - ARAP2 LEAD_SNP rs13117816 chr4 37064331 Intergenic 7 ASSOCIATION 20802204 Multiple sclerosis--Brain Glutamate Levels 5.15490195999 DTHD1 - KIAA1239 LEAD_SNP rs10938397 chr4 45182527 Intergenic 7 ASSOCIATION 20935630 Body mass index 30.3979400087 GNPDA2 - GABRG1 ASSOCIATION 19079261 Body mass index 15.5228787453 GNPDA2 - GABRG1 FUNCTIONAL_SNP rs12641981 chr4 45179883 Intergenic 5b 2644 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.945 FUNCTIONAL_SNP rs13130484 chr4 45175691 Intergenic 7 6836 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10517133 chr4 45364914 Intergenic 7 ASSOCIATION 21700879 Adiponectin levels 5.30102999566 GNPDA2 - GABRG1 FUNCTIONAL_SNP rs4343755 chr4 45369578 Intergenic 6 4664 CEU:1.0;0.801, CHB:1.0;0.818, JPT:0.859;0.556 FUNCTIONAL_SNP rs10517132 chr4 45357702 Intergenic 6 7212 CEU:1.0;0.801, CHB:1.0;0.818, JPT:0.928;0.616 FUNCTIONAL_SNP rs1115737 chr4 45364577 Intergenic 6 337 CEU:1.0;0.801, CHB:1.0;0.818, JPT:0.928;0.616 FUNCTIONAL_SNP rs6826745 chr4 45362545 Intergenic 7 2369 CEU:1.0;0.801, CHB:0.924;0.746, JPT:0.928;0.616 FUNCTIONAL_SNP rs2349125 chr4 45348959 Intergenic 7 15955 CEU:1.0;0.879, YRI:0.863;0.656 FUNCTIONAL_SNP rs10517126 chr4 45266440 Intergenic 7 98474 CEU:1.0;0.879 FUNCTIONAL_SNP rs6826550 chr4 45362520 Intergenic 7 2394 CEU:1.0;0.801, CHB:1.0;0.817, JPT:0.928;0.616 FUNCTIONAL_SNP rs4695097 chr4 45355115 Intergenic 7 9799 CEU:1.0;0.801, CHB:1.0;0.804, JPT:0.787;0.547 LEAD_SNP rs10938494 chr4 47563448 Intron 2b ASSOCIATION 19798445 Sphingolipid levels 18.096910013 ATP10D FUNCTIONAL_SNP rs11729411 chr4 47560163 Coding 6 3285 CEU:1.0;0.93, CHB:1.0;0.95, JPT:1.0;0.937, YRI:1.0;1.0 FUNCTIONAL_SNP rs13106975 chr4 47551863 Intron 7 11585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.929;0.759, YRI:1.0;1.0 FUNCTIONAL_SNP rs9790830 chr4 47557454 Intron 7 5994 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;0.93, YRI:0.95;0.821 LEAD_SNP rs346923 chr4 53412129 Intergenic 4 ASSOCIATION 19260141 Biochemical measures 5.69897000434 SPATA18 - USP46 FUNCTIONAL_SNP rs1347763 chr4 53399616 Intergenic 7 12513 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;0.929 FUNCTIONAL_SNP rs2577946 chr4 53404086 Intergenic 7 8043 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;0.929 LEAD_SNP rs2898681 chr4 53757000 Intron 7 ASSOCIATION 20395239 Optic disc size (cup) 5.69897000434 SCFD2 FUNCTIONAL_SNP rs2046364 chr4 53743218 Intron 5b 13782 CEU:1.0;0.939 FUNCTIONAL_SNP rs4864690 chr4 53750771 Intron 7 6229 CEU:1.0;0.917, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2114039 chr4 55092626 Intron 5b ASSOCIATION 21665993 Corneal curvature 9.0 RPL22P13 - PDGFRA LEAD_SNP rs17690232 chr4 55234825 Intergenic 6 ASSOCIATION 18193045 Height 6.39794000867 PDGFRA - KIT FUNCTIONAL_SNP rs17746992 chr4 55237995 Intergenic 7 3170 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs218237 chr4 55394172 Intergenic 7 ASSOCIATION 20139978 Hematological and biochemical traits 16.6989700043 PDGFRA - KIT ASSOCIATION 20139978 Hematological and biochemical traits 24.5228787453 PDGFRA - KIT FUNCTIONAL_SNP rs218262 chr4 55407905 Intergenic 5b 13733 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.817 LEAD_SNP rs172629 chr4 55407762 Intergenic 5b ASSOCIATION 19862010 Mean corpuscular volume 15.0 PDGFRA - KIT FUNCTIONAL_SNP rs218262 chr4 55407905 Intergenic 5b 143 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;0.881, YRI:0.947;0.896 FUNCTIONAL_SNP rs218237 chr4 55394172 Intergenic 7 13590 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;0.881, YRI:0.944;0.728 LEAD_SNP rs2537859 chr4 55482818 Intergenic 7 ASSOCIATION 19416921 Bipolar disorder 5.39794000867 PDGFRA - KIT FUNCTIONAL_SNP rs987397 chr4 55481585 Intergenic 7 1233 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.822, YRI:1.0;0.808 LEAD_SNP rs6832769 chr4 56298194 Intron 6 ASSOCIATION 18957941 Personality dimensions 5.69897000434 CLOCK FUNCTIONAL_SNP rs3736544 chr4 56309992 Coding 7 11798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs10002541 chr4 56395011 Intron 5a 96817 CEU:1.0;1.0, CHB:1.0;0.929, JPT:1.0;1.0, YRI:1.0;0.84 FUNCTIONAL_SNP rs11726609 chr4 56400869 Intron 5b 102675 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs3817444 chr4 56375981 Intron 5b 77787 CEU:1.0;1.0, CHB:1.0;0.881, JPT:1.0;0.923, YRI:1.0;0.849 FUNCTIONAL_SNP rs6812042 chr4 56396079 Intron 5b 97885 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs3805154 chr4 56363927 Intron 5b 65733 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs4865010 chr4 56414962 Intergenic 5b 116768 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs2177127 chr4 56379959 Intron 6 81765 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs7667849 chr4 56388199 Intron 6 90005 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs1522111 chr4 56329563 Intron 6 31369 CEU:1.0;1.0, CHB:1.0;0.929, JPT:1.0;1.0, YRI:1.0;0.936 FUNCTIONAL_SNP rs11735267 chr4 56347287 Intron 7 49093 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.898 FUNCTIONAL_SNP rs10016506 chr4 56396674 Intron 7 98480 CEU:1.0;0.857, CHB:0.933;0.871, JPT:1.0;0.92, YRI:1.0;0.813 FUNCTIONAL_SNP rs4580704 chr4 56326707 Intron 7 28513 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs9312662 chr4 56386371 Intron 7 88177 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.898 FUNCTIONAL_SNP rs4865018 chr4 56457191 Intron 7 158997 CEU:1.0;0.882, CHB:1.0;0.94, JPT:1.0;0.842, YRI:0.946;0.849 LEAD_SNP rs708547 chr4 57821309 Intergenic 5b ASSOCIATION 21106707 Bleomycin sensitivity 6.04575749056 REST - C4orf14 FUNCTIONAL_SNP rs781667 chr4 57798469 Exon,non-coding 6 22840 CEU:1.0;1.0, CHB:1.0;0.659, YRI:1.0;1.0 FUNCTIONAL_SNP rs10003229 chr4 57809598 Intron 6 11711 CEU:1.0;1.0, CHB:1.0;0.659, YRI:1.0;0.928 FUNCTIONAL_SNP rs7674167 chr4 57721477 Intergenic 6 99832 CEU:0.943;0.889, YRI:1.0;0.644 FUNCTIONAL_SNP rs781551 chr4 57718406 Intergenic 7 102903 CEU:1.0;0.889 LEAD_SNP rs10517437 chr4 59008412 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 5.39794000867 SRIP1 - RPL17P19 FUNCTIONAL_SNP rs2196053 chr4 59009319 Intergenic 6 907 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs12649436 chr4 59015876 Intergenic 6 7464 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs7658369 chr4 59023476 Intergenic 7 15064 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs1433409 chr4 59006847 Intergenic 7 1565 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.819 FUNCTIONAL_SNP rs4865305 chr4 59018718 Intergenic 7 10306 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.828 LEAD_SNP rs10517480 chr4 60748829 Intergenic 6 ASSOCIATION 19043545 Serum metabolites 6.69897000434 SRIP1 - RPL17P19 FUNCTIONAL_SNP rs13127928 chr4 60750422 Intergenic 6 1593 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13111651 chr4 60766922 Intergenic 6 18093 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13119899 chr4 60748500 Intergenic 6 329 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10517482 chr4 60748433 Intergenic 6 396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13131266 chr4 60751925 Intergenic 7 3096 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13119364 chr4 60748237 Intergenic 7 592 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13113226 chr4 60748360 Intergenic 7 469 CEU:1.0;0.86, CHB:1.0;0.808, JPT:1.0;0.951, YRI:1.0;0.825 FUNCTIONAL_SNP rs11944029 chr4 60751868 Intergenic 7 3039 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11944118 chr4 60752123 Intergenic 7 3294 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4599440 chr4 61966273 Intergenic 6 ASSOCIATION 19260141 Biochemical measures 5.69897000434 SRIP1 - RPL17P19 LEAD_SNP rs6856328 chr4 62437318 Intron 6 ASSOCIATION 21107309 Working memory 6.09691001301 LPHN3 LEAD_SNP rs2172802 chr4 62453209 Intron 7 ASSOCIATION 20522523 Partial epilepsies 5.52287874528 LPHN3 FUNCTIONAL_SNP rs12642315 chr4 62448934 Intron 6 4275 CEU:0.946;0.894, JPT:1.0;0.708, YRI:1.0;0.956 FUNCTIONAL_SNP rs35550109 chr4 62462234 Intron 7 9025 CEU:1.0;0.953, CHB:0.935;0.619, JPT:0.883;0.641, YRI:1.0;0.93 FUNCTIONAL_SNP rs10018746 chr4 62445246 Intron 7 7963 CEU:1.0;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.93 LEAD_SNP rs1155865 chr4 67733857 Intergenic 5a ASSOCIATION 17903297 Cognitive test performance 5.69897000434 RPS23P3 - CENPC1 FUNCTIONAL_SNP rs7663519 chr4 67733709 Intergenic 5a 148 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9999249 chr4 67758372 Intergenic 6 24515 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs7683559 chr4 67729599 Intergenic 7 4258 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs4860793 chr4 67743418 Intergenic 7 9561 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 LEAD_SNP rs10518025 chr4 68064440 Intergenic 6 ASSOCIATION 19010793 Multiple sclerosis (severity) 5.39794000867 RPS23P3 - CENPC1 FUNCTIONAL_SNP rs10518024 chr4 68063524 Intergenic 6 916 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2242330 chr4 68447249 Intron 4 ASSOCIATION 17052657 Parkinson's disease 5.69897000434 STAP1 LEAD_SNP rs1109501 chr4 71329490 Intron 6 ASSOCIATION 21529783 Alcoholism (heaviness of drinking) 5.30102999566 MUC7 FUNCTIONAL_SNP rs11932207 chr4 71330534 Intron 6 1044 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10006705 chr4 71295991 Intergenic 6 33499 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs10028351 chr4 71295971 Intergenic 6 33519 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs11249502 chr4 71341161 Intron 6 11671 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10003641 chr4 71340427 Intron 7 10937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13148900 chr4 71361114 Intergenic 7 31624 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.953 LEAD_SNP rs2282679 chr4 72608383 Intron 7 ASSOCIATION 20541252 Vitamin D insufficiency 108.698970004 GC ASSOCIATION 20418485 Vitamin D levels 48.6989700043 GC FUNCTIONAL_SNP rs4588 chr4 72618323 Coding 5b 9940 CEU:1.0;1.0, CHB:1.0;0.942, JPT:0.924;0.744 FUNCTIONAL_SNP rs2298850 chr4 72614267 Intron 6 5884 CEU:1.0;0.952, CHB:1.0;1.0, JPT:0.925;0.746 FUNCTIONAL_SNP rs1155563 chr4 72643488 Intron 6 35105 CEU:1.0;0.831 FUNCTIONAL_SNP rs17467825 chr4 72605517 Intergenic 6 2866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3755967 chr4 72609398 Intron 7 1015 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7697556 chr4 73515313 Intergenic 7 ASSOCIATION 20881960 Height 13.6989700043 ADAMTS3 - RNU6ATAC5P FUNCTIONAL_SNP rs1518492 chr4 73433875 Intron 4 81438 CEU:0.959;0.85, CHB:1.0;0.91, JPT:1.0;0.909, YRI:1.0;0.591 FUNCTIONAL_SNP rs1401153 chr4 73432895 Intron 4 82418 CEU:0.959;0.85, CHB:1.0;0.829, JPT:0.946;0.775 FUNCTIONAL_SNP rs12639746 chr4 73513026 Intergenic 5a 2287 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13104467 chr4 73455382 Intergenic 5a 59931 CEU:0.961;0.923, CHB:1.0;0.954, JPT:1.0;0.909 FUNCTIONAL_SNP rs16848467 chr4 73529442 Intergenic 5b 14129 CEU:1.0;0.961, JPT:1.0;0.532 FUNCTIONAL_SNP rs1518481 chr4 73529753 Intergenic 5b 14440 CEU:1.0;0.96, JPT:1.0;0.532, YRI:1.0;1.0 FUNCTIONAL_SNP rs6852061 chr4 73436699 Intergenic 5b 78614 CEU:0.96;0.886, CHB:1.0;0.91, JPT:1.0;0.907 FUNCTIONAL_SNP rs6446841 chr4 73437856 Intergenic 5b 77457 CEU:0.951;0.826 FUNCTIONAL_SNP rs9993613 chr4 73476014 Intergenic 6 39299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs1518485 chr4 73470972 Intergenic 6 44341 CEU:0.96;0.921, CHB:1.0;0.954, JPT:1.0;0.909 FUNCTIONAL_SNP rs16848284 chr4 73476901 Intergenic 6 38412 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10938030 chr4 73454720 Intergenic 6 60593 CEU:0.961;0.923, CHB:1.0;0.954, JPT:1.0;0.909 FUNCTIONAL_SNP rs1401139 chr4 73477532 Intergenic 6 37781 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1401144 chr4 73506817 Intergenic 6 8496 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16848337 chr4 73493078 Intergenic 6 22235 CEU:1.0;0.924, CHB:1.0;0.953, JPT:1.0;0.953 FUNCTIONAL_SNP rs4694504 chr4 73496691 Intergenic 6 18622 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4694125 chr4 73491873 Intergenic 6 23440 CEU:1.0;0.924, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs12645174 chr4 73431464 Intron 6 83849 CEU:0.959;0.85, CHB:1.0;0.829, JPT:0.946;0.775 FUNCTIONAL_SNP rs6841091 chr4 73459531 Intergenic 7 55782 CEU:0.961;0.923, CHB:1.0;0.954, JPT:1.0;0.907, YRI:1.0;0.607 FUNCTIONAL_SNP rs11728435 chr4 73509826 Intergenic 7 5487 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4694508 chr4 73530159 Intergenic 7 14846 CEU:1.0;0.925, JPT:1.0;0.532 FUNCTIONAL_SNP rs1518487 chr4 73466458 Intergenic 7 48855 CEU:0.961;0.923, CHB:1.0;0.954, JPT:1.0;0.909 FUNCTIONAL_SNP rs753944 chr4 73449917 Intergenic 7 65396 CEU:1.0;0.962, CHB:1.0;0.954, JPT:1.0;0.909, YRI:1.0;0.934 FUNCTIONAL_SNP rs1518489 chr4 73429638 Intron 7 85675 CEU:0.959;0.85, CHB:1.0;0.829, JPT:0.946;0.775, YRI:1.0;0.591 FUNCTIONAL_SNP rs11731563 chr4 73489191 Intergenic 7 26122 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17775434 chr4 73525567 Intergenic 7 10254 CEU:1.0;1.0, JPT:1.0;0.571, YRI:1.0;0.865 FUNCTIONAL_SNP rs7689931 chr4 73423124 Intron 7 92189 CEU:0.959;0.85, CHB:1.0;0.829, JPT:0.946;0.775 FUNCTIONAL_SNP rs9784530 chr4 73527617 Intergenic 7 12304 CEU:1.0;0.961, JPT:1.0;0.532 FUNCTIONAL_SNP rs10026348 chr4 73525173 Intergenic 7 9860 CEU:1.0;1.0, JPT:1.0;0.532 FUNCTIONAL_SNP rs1878756 chr4 73478415 Intergenic 7 36898 CEU:0.961;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4694501 chr4 73476315 Intergenic 7 38998 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1878759 chr4 73514262 Intergenic 7 1051 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4694124 chr4 73479251 Intergenic 7 36062 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16848143 chr4 73441573 Intergenic 7 73740 CEU:0.96;0.886, CHB:1.0;0.954, JPT:1.0;0.909 FUNCTIONAL_SNP rs12643350 chr4 73535169 Intergenic 7 19856 CEU:1.0;0.959, JPT:1.0;0.512 FUNCTIONAL_SNP rs7670141 chr4 73510707 Intergenic 7 4606 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs719381 chr4 73453998 Intergenic 7 61315 CEU:0.96;0.921, CHB:1.0;0.954, JPT:1.0;0.909, YRI:1.0;0.577 LEAD_SNP rs6816344 chr4 73783404 Intergenic 7 ASSOCIATION 21546767 Dialysis-related mortality 6.0 ADAMTS3 - RNU6ATAC5P LEAD_SNP rs546829 chr4 74956372 Intergenic 7 ASSOCIATION 21738478 White blood cell types 6.52287874528 PPBPL2 - CXCL2 LEAD_SNP rs1371799 chr4 74977837 Intergenic 4 ASSOCIATION 21738479 White blood cell count 16.6989700043 CXCL2 - MTHFD2L FUNCTIONAL_SNP rs9131 chr4 74963049 Exon,non-coding 4 14788 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs7667376 chr4 74967890 Intergenic 3a 9947 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs10938107 chr4 74990919 Intergenic 3a 13082 CEU:0.953;0.869, CHB:1.0;0.532, JPT:0.933;0.613 FUNCTIONAL_SNP rs3806792 chr4 74965274 Intergenic 4 12563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs1837559 chr4 74959093 Intergenic 5a 18744 CEU:0.957;0.878, CHB:1.0;0.577, JPT:1.0;0.716 FUNCTIONAL_SNP rs491641 chr4 75012386 Intron 5a 34549 CEU:1.0;0.85, CHB:0.936;0.645 FUNCTIONAL_SNP rs1866755 chr4 74978340 Intergenic 5b 503 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs549280 chr4 74971196 Intergenic 6 6641 CEU:1.0;0.913, CHB:1.0;0.59, JPT:1.0;0.704 FUNCTIONAL_SNP rs7686861 chr4 74998484 Intron 6 20647 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs11733208 chr4 74946994 Intergenic 6 30843 CEU:0.957;0.878, CHB:0.931;0.523, JPT:1.0;0.716 FUNCTIONAL_SNP rs13124617 chr4 74947348 Intergenic 7 30489 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs546829 chr4 74956372 Intergenic 7 21465 CEU:0.948;0.815, CHB:1.0;0.564, JPT:1.0;0.634 FUNCTIONAL_SNP rs1371794 chr4 74948054 Intergenic 7 29783 CEU:0.953;0.869, CHB:1.0;0.59, JPT:1.0;0.634 FUNCTIONAL_SNP rs1371798 chr4 74976781 Intergenic 7 1056 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12649753 chr4 74940765 Intergenic 7 37072 CEU:0.953;0.869, CHB:1.0;0.564, JPT:1.0;0.634 FUNCTIONAL_SNP rs12642974 chr4 74990691 Intergenic 7 12854 CEU:0.955;0.912, JPT:0.932;0.587 FUNCTIONAL_SNP rs1893319 chr4 74973129 Intergenic 7 4708 CEU:1.0;0.913, CHB:1.0;0.59, JPT:1.0;0.704 FUNCTIONAL_SNP rs882638 chr4 74956538 Intergenic 7 21299 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs1350666 chr4 75224590 Intergenic 5b ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.09691001301 EPGN - EREG LEAD_SNP rs2273 chr4 76889388 Intron 5a ASSOCIATION 20834067 Longevity 6.0 SDAD1 FUNCTIONAL_SNP rs2242471 chr4 76878716 Coding 6 10672 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6826085 chr4 76870229 Intergenic 4 19159 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2242473 chr4 76878956 Intron 6 10432 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2242474 chr4 76878982 Intron 6 10406 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4859413 chr4 76898250 Intron 6 8862 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4859581 chr4 76906974 Intron 6 17586 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4859582 chr4 76907213 Intron 6 17825 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9307050 chr4 76905649 Intron 6 16261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6812193 chr4 77198986 Intron 5b ASSOCIATION 21738487 Parkinson's disease 9.09691001301 FAM47E ASSOCIATION 19915575 Parkinson's disease 6.39794000867 FAM47E FUNCTIONAL_SNP rs1946959 chr4 77196677 Intron 4 2309 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 LEAD_SNP rs9992101 chr4 77360431 Intron 5b ASSOCIATION 20383145 Serum creatinine 8.22184874962 SHROOM3 FUNCTIONAL_SNP rs4859682 chr4 77410318 Intron 5b 49887 CEU:1.0;0.889, JPT:1.0;0.5 FUNCTIONAL_SNP rs13146355 chr4 77412140 Intron 5b 51709 CEU:0.958;0.847, JPT:1.0;0.5 FUNCTIONAL_SNP rs10023335 chr4 77358987 Intron 7 1444 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91 LEAD_SNP rs17319721 chr4 77368847 Intron 5b ASSOCIATION 20383146 Chronic kidney disease 19.0 SHROOM3 ASSOCIATION 19430482 Renal function and chronic kidney disease 12.0 SHROOM3 FUNCTIONAL_SNP rs4859682 chr4 77410318 Intron 5b 41471 CEU:1.0;0.889, CHB:1.0;0.535 FUNCTIONAL_SNP rs17253722 chr4 77367287 Intron 5b 1560 CEU:1.0;1.0, CHB:1.0;0.658, JPT:1.0;0.533 FUNCTIONAL_SNP rs13146355 chr4 77412140 Intron 5b 43293 CEU:0.958;0.847, CHB:1.0;0.535 FUNCTIONAL_SNP rs1398016 chr4 77367688 Intron 6 1159 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811 FUNCTIONAL_SNP rs1398018 chr4 77372923 Intron 6 4076 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811 LEAD_SNP rs13146355 chr4 77412140 Intron 5b ASSOCIATION 20700443 Serum magnesium levels 12.2218487496 SHROOM3 FUNCTIONAL_SNP rs4859682 chr4 77410318 Intron 5b 1822 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.705 FUNCTIONAL_SNP rs9992101 chr4 77360431 Intron 5b 51709 CEU:0.958;0.847, JPT:1.0;0.5 FUNCTIONAL_SNP rs17253722 chr4 77367287 Intron 5b 44853 CEU:0.958;0.847 FUNCTIONAL_SNP rs17319721 chr4 77368847 Intron 5b 43293 CEU:0.958;0.847, CHB:1.0;0.535 FUNCTIONAL_SNP rs1398016 chr4 77367688 Intron 6 44452 CEU:0.958;0.847, CHB:1.0;0.535, JPT:1.0;0.5 FUNCTIONAL_SNP rs1398018 chr4 77372923 Intron 6 39217 CEU:0.922;0.819, CHB:1.0;0.538 FUNCTIONAL_SNP rs10023335 chr4 77358987 Intron 7 53153 CEU:0.958;0.847 LEAD_SNP rs13106227 chr4 77418681 Intron 7 ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 5.39794000867 SHROOM3 FUNCTIONAL_SNP rs12512288 chr4 77416817 Intron 5b 1864 CEU:0.954;0.87, CHB:1.0;0.948, JPT:1.0;0.854, YRI:1.0;0.957 FUNCTIONAL_SNP rs12503749 chr4 77418383 Intron 5b 298 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs12500824 chr4 77416627 Intron 5b 2054 CEU:0.953;0.908, CHB:1.0;0.951, JPT:1.0;0.861, YRI:1.0;1.0 FUNCTIONAL_SNP rs4859683 chr4 77419073 Intron 7 392 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs4859684 chr4 77419107 Intron 7 426 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;0.909 FUNCTIONAL_SNP rs2068062 chr4 77417214 Intron 7 1467 CEU:1.0;0.957, CHB:1.0;0.952, JPT:1.0;0.861, YRI:0.955;0.912 FUNCTIONAL_SNP rs2068063 chr4 77417203 Intron 7 1478 CEU:1.0;0.957, CHB:1.0;0.952, JPT:1.0;0.861, YRI:1.0;1.0 LEAD_SNP rs1986734 chr4 77420784 Intron 2b ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 6.0 SHROOM3 LEAD_SNP rs1268789 chr4 79280693 Intron 6 ASSOCIATION 19896111 Hair morphology 7.15490195999 FRAS1 FUNCTIONAL_SNP rs345545 chr4 79283643 Intron 4 2950 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.562 FUNCTIONAL_SNP rs345546 chr4 79283595 Intron 4 2902 CEU:1.0;0.953, CHB:1.0;0.881, JPT:1.0;1.0, YRI:1.0;0.562 FUNCTIONAL_SNP rs345544 chr4 79283711 Intron 5a 3018 CEU:1.0;1.0, CHB:1.0;0.885, JPT:1.0;1.0, YRI:1.0;0.562 FUNCTIONAL_SNP rs22078 chr4 79282532 Intron 5b 1839 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs375726 chr4 79281750 Intron 5b 1057 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.911 FUNCTIONAL_SNP rs447200 chr4 79280088 Intron 6 605 CEU:1.0;0.955, CHB:1.0;0.885, JPT:1.0;1.0, YRI:1.0;0.704 FUNCTIONAL_SNP rs529184 chr4 79283403 Intron 6 2710 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.562 FUNCTIONAL_SNP rs120233 chr4 79282348 Intron 6 1655 CEU:1.0;0.953, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1385131 chr4 79282759 Intron 7 2066 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.844, YRI:1.0;1.0 FUNCTIONAL_SNP rs431907 chr4 79281028 Intron 7 335 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.697 LEAD_SNP rs1455311 chr4 79964587 Intergenic 5b ASSOCIATION 20595579 Longevity 18.0 PAQR3 - NAA11 FUNCTIONAL_SNP rs11723226 chr4 79963550 Intergenic 4 1037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1455310 chr4 79965691 Intergenic 6 1104 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs999002 chr4 79955405 Intergenic 7 9182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6852257 chr4 79957848 Intergenic 7 6739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1466475 chr4 79956703 Intergenic 7 7884 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10518224 chr4 80564508 Intergenic 7 ASSOCIATION 19197348 Quantitative traits 5.15490195999 OR7E94P - GDEP LEAD_SNP rs4389526 chr4 80946475 Intron 6 ASSOCIATION 21743469 Ankylosing spondylitis 7.04575749056 ANTXR2 FUNCTIONAL_SNP rs28830602 chr4 80908833 Intron 4 37642 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0, YRI:0.931;0.564 FUNCTIONAL_SNP rs4333130 chr4 80949829 Intron 6 3354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4640621 chr4 80946541 Intron 6 66 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7687189 chr4 80947908 Intron 7 1433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.834 LEAD_SNP rs4333130 chr4 80949829 Intron 6 ASSOCIATION 20062062 Ankylosing spondylitis 7.04575749056 ANTXR2 FUNCTIONAL_SNP rs28830602 chr4 80908833 Intron 4 40996 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0, YRI:0.931;0.564 FUNCTIONAL_SNP rs4389526 chr4 80946475 Intron 6 3354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4640621 chr4 80946541 Intron 6 3288 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7687189 chr4 80947908 Intron 7 1921 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.861 LEAD_SNP rs16998073 chr4 81184341 Intergenic 6 ASSOCIATION 19430483 Diastolic blood pressure 21.0 PRDM8 - FGF5 LEAD_SNP rs710841 chr4 82149831 Intergenic 6 ASSOCIATION 19343178 Height 7.69897000434 PRKG2 - RASGEF1B ASSOCIATION 18391951 Height 5.69897000434 PRKG2 - RASGEF1B FUNCTIONAL_SNP rs1662853 chr4 82144926 Intergenic 6 4905 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs1712374 chr4 82154710 Intergenic 7 4879 CEU:1.0;0.822, CHB:1.0;0.923, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs788867 chr4 82150006 Intergenic 6 ASSOCIATION 20881960 Height 27.0457574906 PRKG2 - RASGEF1B FUNCTIONAL_SNP rs10488936 chr4 82212170 Intergenic 4 62164 CEU:1.0;0.945 FUNCTIONAL_SNP rs1517554 chr4 82181810 Intergenic 4 31804 CEU:1.0;0.842 FUNCTIONAL_SNP rs1975474 chr4 82178937 Intergenic 5a 28931 CEU:1.0;1.0 FUNCTIONAL_SNP rs17499843 chr4 82298752 Intergenic 5a 148746 CEU:0.941;0.836 FUNCTIONAL_SNP rs1662838 chr4 82165160 Intergenic 5a 15154 CEU:1.0;1.0 FUNCTIONAL_SNP rs1452374 chr4 82282233 Intergenic 5b 132227 CEU:0.941;0.837 FUNCTIONAL_SNP rs2034629 chr4 82226349 Intergenic 5b 76343 CEU:1.0;0.945 FUNCTIONAL_SNP rs1901568 chr4 82187030 Intergenic 6 37024 CEU:1.0;0.945 FUNCTIONAL_SNP rs17427971 chr4 82304359 Intergenic 6 154353 CEU:0.941;0.836 FUNCTIONAL_SNP rs6535240 chr4 82194542 Intergenic 6 44536 CEU:1.0;0.947 FUNCTIONAL_SNP rs7669368 chr4 82279666 Intergenic 6 129660 CEU:0.937;0.826 FUNCTIONAL_SNP rs3114141 chr4 82170500 Intergenic 6 20494 CEU:1.0;1.0 FUNCTIONAL_SNP rs710841 chr4 82149831 Intergenic 6 175 CEU:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs1443537 chr4 82150880 Intergenic 6 874 CEU:1.0;0.835 FUNCTIONAL_SNP rs10034481 chr4 82187772 Intergenic 6 37766 CEU:1.0;0.945 FUNCTIONAL_SNP rs994014 chr4 82165790 Intergenic 6 15784 CEU:1.0;1.0 FUNCTIONAL_SNP rs3098968 chr4 82173879 Intergenic 6 23873 CEU:1.0;1.0 FUNCTIONAL_SNP rs1662853 chr4 82144926 Intergenic 6 5080 CEU:1.0;0.835, YRI:1.0;1.0 FUNCTIONAL_SNP rs7698361 chr4 82319974 Intergenic 6 169968 CEU:0.944;0.844 FUNCTIONAL_SNP rs1961460 chr4 82174498 Intergenic 6 24492 CEU:1.0;1.0 FUNCTIONAL_SNP rs1878528 chr4 82184234 Intergenic 7 34228 CEU:1.0;0.945 FUNCTIONAL_SNP rs9997916 chr4 82188005 Intergenic 7 37999 CEU:1.0;0.947 FUNCTIONAL_SNP rs17427571 chr4 82254908 Intergenic 7 104902 CEU:0.942;0.887 FUNCTIONAL_SNP rs17499257 chr4 82217651 Intergenic 7 67645 CEU:1.0;0.809 FUNCTIONAL_SNP rs2058368 chr4 82274989 Intergenic 7 124983 CEU:0.944;0.844 FUNCTIONAL_SNP rs1473160 chr4 82279399 Intergenic 7 129393 CEU:0.941;0.836 FUNCTIONAL_SNP rs17499829 chr4 82297896 Intergenic 7 147890 CEU:0.941;0.836 FUNCTIONAL_SNP rs1443536 chr4 82174165 Intergenic 7 24159 CEU:1.0;1.0 FUNCTIONAL_SNP rs1712374 chr4 82154710 Intergenic 7 4704 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1712379 chr4 82154014 Intergenic 7 4008 CEU:1.0;1.0, YRI:1.0;0.603 FUNCTIONAL_SNP rs41501452 chr4 82272105 Intergenic 7 122099 CEU:0.941;0.836 FUNCTIONAL_SNP rs17556750 chr4 82155568 Intergenic 7 5562 CEU:1.0;1.0 FUNCTIONAL_SNP rs1115919 chr4 82173397 Intergenic 7 23391 CEU:1.0;0.835 FUNCTIONAL_SNP rs2197271 chr4 82160348 Intergenic 7 10342 CEU:1.0;0.885 FUNCTIONAL_SNP rs7661369 chr4 82166066 Intergenic 7 16060 CEU:1.0;1.0 FUNCTIONAL_SNP rs3098972 chr4 82180533 Intergenic 7 30527 CEU:1.0;0.888 FUNCTIONAL_SNP rs1662835 chr4 82172449 Intergenic 7 22443 CEU:1.0;1.0 FUNCTIONAL_SNP rs1662837 chr4 82168889 Intergenic 7 18883 CEU:1.0;1.0 FUNCTIONAL_SNP rs1662840 chr4 82156409 Intergenic 7 6403 CEU:1.0;0.833, YRI:0.919;0.551 FUNCTIONAL_SNP rs1662843 chr4 82154942 Intergenic 7 4936 CEU:1.0;1.0 FUNCTIONAL_SNP rs1662844 chr4 82154680 Intergenic 7 4674 CEU:1.0;0.842, YRI:1.0;0.603 FUNCTIONAL_SNP rs1400746 chr4 82153533 Intergenic 7 3527 CEU:1.0;0.818 FUNCTIONAL_SNP rs7696324 chr4 82276881 Intergenic 7 126875 CEU:0.941;0.836 FUNCTIONAL_SNP rs1568201 chr4 82163448 Intergenic 7 13442 CEU:1.0;0.835 FUNCTIONAL_SNP rs41515854 chr4 82269628 Intergenic 7 119622 CEU:0.941;0.836 LEAD_SNP rs7658637 chr4 83499313 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 6.22184874962 RPS6P6 - C4orf11 LEAD_SNP rs1494961 chr4 84374480 Coding 5b ASSOCIATION 21437268 Upper aerodigestive tract cancers 8.0 HELQ FUNCTIONAL_SNP rs11099601 chr4 84382763 Exon,non-coding 5a 8283 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs971539 chr4 84433804 Intron 4 59324 CEU:1.0;1.0, CHB:1.0;0.761, JPT:1.0;0.855 FUNCTIONAL_SNP rs13128503 chr4 84430178 Intron 5a 55698 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;1.0 FUNCTIONAL_SNP rs9284657 chr4 84419143 Intron 5a 44663 CEU:1.0;1.0, CHB:1.0;0.93, JPT:1.0;1.0 FUNCTIONAL_SNP rs6857743 chr4 84459866 Intron 5b 85386 CEU:1.0;0.851, CHB:0.85;0.722, JPT:1.0;0.899 FUNCTIONAL_SNP rs11947695 chr4 84425758 Intron 5b 51278 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;1.0 FUNCTIONAL_SNP rs6535481 chr4 84455601 Intergenic 5b 81121 CEU:1.0;1.0, CHB:0.85;0.722, JPT:1.0;0.899 FUNCTIONAL_SNP rs7679811 chr4 84448176 Intergenic 5b 73696 CEU:1.0;1.0, CHB:0.906;0.821, JPT:1.0;1.0 FUNCTIONAL_SNP rs10010961 chr4 84452761 Intergenic 5b 78281 CEU:1.0;1.0, CHB:0.897;0.73, JPT:1.0;0.776 FUNCTIONAL_SNP rs9992543 chr4 84456409 Intergenic 5b 81929 CEU:1.0;1.0, CHB:0.85;0.722, JPT:1.0;0.899 FUNCTIONAL_SNP rs28360718 chr4 84465855 Intron 6 91375 CEU:1.0;0.851, CHB:0.85;0.722, JPT:1.0;0.899 FUNCTIONAL_SNP rs6535473 chr4 84364808 Intron 6 9672 CEU:1.0;1.0, CHB:1.0;0.93, JPT:1.0;1.0 FUNCTIONAL_SNP rs4235062 chr4 84351153 Intron 6 23327 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;0.948, YRI:0.934;0.773 FUNCTIONAL_SNP rs12649417 chr4 84398990 Intron 6 24510 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs10032581 chr4 84467747 Intron 6 93267 CEU:1.0;0.851, CHB:0.85;0.722, JPT:1.0;0.899 FUNCTIONAL_SNP rs11099599 chr4 84367050 Intron 6 7430 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7694435 chr4 84423655 Intron 6 49175 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;1.0 FUNCTIONAL_SNP rs10516690 chr4 84465613 Intron 6 91133 CEU:1.0;0.851, CHB:0.85;0.722, JPT:1.0;0.899 FUNCTIONAL_SNP rs1980271 chr4 84439820 Intron 6 65340 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;1.0 FUNCTIONAL_SNP rs17355265 chr4 84461507 Intron 7 87027 CEU:1.0;0.851, CHB:0.85;0.722, JPT:1.0;0.899 FUNCTIONAL_SNP rs7672834 chr4 84462945 Intron 7 88465 CEU:1.0;0.851, CHB:0.85;0.722, JPT:1.0;0.899 FUNCTIONAL_SNP rs28488925 chr4 84414282 Intron 7 39802 CEU:1.0;1.0, CHB:1.0;0.93, JPT:1.0;1.0 FUNCTIONAL_SNP rs13121249 chr4 84429213 Intron 7 54733 CEU:1.0;1.0, CHB:1.0;0.858, JPT:1.0;1.0 FUNCTIONAL_SNP rs10023702 chr4 84441716 Intron 7 67236 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;1.0 FUNCTIONAL_SNP rs11930653 chr4 84426584 Intron 7 52104 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;1.0 FUNCTIONAL_SNP rs11728733 chr4 84428503 Intron 7 54023 CEU:1.0;1.0, CHB:1.0;0.865, JPT:1.0;1.0 FUNCTIONAL_SNP rs17355209 chr4 84453308 Intergenic 7 78828 CEU:1.0;1.0, CHB:0.85;0.722, JPT:1.0;0.897 FUNCTIONAL_SNP rs4693089 chr4 84373622 Intron 7 858 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10022623 chr4 84467863 Intron 7 93383 CEU:1.0;0.851, CHB:0.85;0.722, JPT:1.0;0.899 FUNCTIONAL_SNP rs6854739 chr4 84367759 Intron 7 6721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10011104 chr4 84467851 Intron 7 93371 CEU:1.0;0.848, CHB:0.85;0.722, JPT:1.0;0.896 FUNCTIONAL_SNP rs11724892 chr4 84453788 Intergenic 7 79308 CEU:1.0;0.831, CHB:0.779;0.607, JPT:1.0;0.7 FUNCTIONAL_SNP rs6841172 chr4 84464472 Intron 7 89992 CEU:1.0;0.851, CHB:0.85;0.722, JPT:1.0;0.897 LEAD_SNP rs7692808 chr4 86641149 Intron 7 ASSOCIATION 20062060 PR interval 19.2218487496 ARHGAP24 FUNCTIONAL_SNP rs13105921 chr4 86699726 Intron 4 58577 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;1.0, YRI:1.0;0.748 FUNCTIONAL_SNP rs11736641 chr4 86683729 Intron 4 42580 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11732231 chr4 86683560 Intron 5b 42411 CEU:1.0;0.822, CHB:1.0;0.651, YRI:1.0;0.935 FUNCTIONAL_SNP rs13111662 chr4 86683121 Intron 5b 41972 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs343849 chr4 86663055 Intron 5b 21906 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13137008 chr4 86674199 Intron 5b 33050 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.882 FUNCTIONAL_SNP rs2062098 chr4 86652248 Intron 6 11099 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10012090 chr4 86638926 Intron 6 2223 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7660702 chr4 86651464 Intron 6 10315 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0 FUNCTIONAL_SNP rs7658797 chr4 86642714 Intron 6 1565 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0 FUNCTIONAL_SNP rs343860 chr4 86644336 Intron 6 3187 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;0.796, YRI:1.0;0.582 FUNCTIONAL_SNP rs1482094 chr4 86650019 Intron 6 8870 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2601855 chr4 86664940 Intron 6 23791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2198328 chr4 86660244 Intron 7 19095 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.552 FUNCTIONAL_SNP rs7677114 chr4 86651080 Intron 7 9931 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1482085 chr4 86630512 Intron 7 10637 CEU:1.0;0.825, CHB:1.0;0.65, YRI:1.0;0.762 FUNCTIONAL_SNP rs7655100 chr4 86620868 Intron 7 20281 CEU:1.0;0.83, CHB:1.0;0.586, YRI:1.0;0.671 FUNCTIONAL_SNP rs994285 chr4 86659114 Intron 7 17965 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10516755 chr4 86666041 Intron 7 24892 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;1.0 FUNCTIONAL_SNP rs13111293 chr4 86682968 Intron 7 41819 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7660702 chr4 86651464 Intron 6 ASSOCIATION 20062063 Electrocardiographic traits 16.5228787453 ARHGAP24 FUNCTIONAL_SNP rs13105921 chr4 86699726 Intron 4 48262 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11736641 chr4 86683729 Intron 4 32265 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11732231 chr4 86683560 Intron 5b 32096 CEU:1.0;0.811 FUNCTIONAL_SNP rs13111662 chr4 86683121 Intron 5b 31657 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0 FUNCTIONAL_SNP rs343849 chr4 86663055 Intron 5b 11591 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0 FUNCTIONAL_SNP rs13137008 chr4 86674199 Intron 5b 22735 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0 FUNCTIONAL_SNP rs2062098 chr4 86652248 Intron 6 784 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0, YRI:1.0;0.715 FUNCTIONAL_SNP rs7658797 chr4 86642714 Intron 6 8750 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs343860 chr4 86644336 Intron 6 7128 CEU:1.0;1.0, JPT:1.0;0.796 FUNCTIONAL_SNP rs10012090 chr4 86638926 Intron 6 12538 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0 FUNCTIONAL_SNP rs1482094 chr4 86650019 Intron 6 1445 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2601855 chr4 86664940 Intron 6 13476 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0 FUNCTIONAL_SNP rs7655100 chr4 86620868 Intron 7 30596 CEU:1.0;0.82 FUNCTIONAL_SNP rs7692808 chr4 86641149 Intron 7 10315 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0 FUNCTIONAL_SNP rs10516755 chr4 86666041 Intron 7 14577 CEU:1.0;1.0, CHB:1.0;0.671, JPT:1.0;1.0 FUNCTIONAL_SNP rs2198328 chr4 86660244 Intron 7 8780 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0 FUNCTIONAL_SNP rs7677114 chr4 86651080 Intron 7 384 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0, YRI:1.0;0.715 FUNCTIONAL_SNP rs1482085 chr4 86630512 Intron 7 20952 CEU:1.0;0.825 FUNCTIONAL_SNP rs994285 chr4 86659114 Intron 7 7650 CEU:1.0;0.906, CHB:1.0;0.568, JPT:1.0;1.0 FUNCTIONAL_SNP rs13111293 chr4 86682968 Intron 7 31504 CEU:1.0;1.0, CHB:1.0;0.568, JPT:1.0;1.0 LEAD_SNP rs442177 chr4 88030261 Intron 7 ASSOCIATION 20864672 Triglycerides 9.52287874528 AFF1 FUNCTIONAL_SNP rs1408 chr4 88057353 Exon,non-coding 6 27092 CEU:1.0;0.921, CHB:1.0;0.908, JPT:1.0;0.826 FUNCTIONAL_SNP rs342468 chr4 88051908 Intron 3a 21647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs2045592 chr4 88014346 Intron 4 15915 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs342454 chr4 88021500 Intron 4 8761 CEU:1.0;1.0 FUNCTIONAL_SNP rs236985 chr4 88008782 Intron 4 21479 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:0.953;0.605 FUNCTIONAL_SNP rs236984 chr4 88008614 Intron 4 21647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:0.963;0.865 FUNCTIONAL_SNP rs3775220 chr4 88014753 Intron 4 15508 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs342467 chr4 88052219 Intron 5a 21958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.826, YRI:0.959;0.767 FUNCTIONAL_SNP rs342437 chr4 88040909 Intron 5b 10648 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.872 FUNCTIONAL_SNP rs342438 chr4 88040406 Intron 5b 10145 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.867, YRI:0.841;0.655 FUNCTIONAL_SNP rs342452 chr4 88018408 Intron 5b 11853 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.956, YRI:0.957;0.646 FUNCTIONAL_SNP rs236995 chr4 88000423 Intron 5b 29838 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.956, YRI:0.965;0.872 FUNCTIONAL_SNP rs1037814 chr4 88049850 Intron 5b 19589 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.826, YRI:1.0;0.803 FUNCTIONAL_SNP rs3736669 chr4 87992753 Intron 5b 37508 CEU:0.958;0.847, CHB:0.953;0.909, JPT:1.0;0.913 FUNCTIONAL_SNP rs236993 chr4 88016874 Intron 6 13387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.956, YRI:0.965;0.87 FUNCTIONAL_SNP rs3775214 chr4 88023299 Intron 6 6962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs10023050 chr4 88064431 Intergenic 7 34170 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.83 FUNCTIONAL_SNP rs4693156 chr4 88007227 Intron 7 23034 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs11097127 chr4 87990334 Intron 7 39927 CEU:0.958;0.847, CHB:0.951;0.864, JPT:1.0;0.913 FUNCTIONAL_SNP rs342456 chr4 88023870 Intron 7 6391 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.956 FUNCTIONAL_SNP rs236992 chr4 88016739 Intron 7 13522 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.956, YRI:0.965;0.872 FUNCTIONAL_SNP rs342466 chr4 88053085 Intron 7 22824 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.826 FUNCTIONAL_SNP rs236996 chr4 88005203 Intron 7 25058 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:0.962;0.86 FUNCTIONAL_SNP rs342469 chr4 88050554 Intron 7 20293 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.834, YRI:1.0;0.785 FUNCTIONAL_SNP rs7660883 chr4 87982876 Intron 7 47385 CEU:0.956;0.84, CHB:0.949;0.857, JPT:1.0;0.909, YRI:0.825;0.508 FUNCTIONAL_SNP rs2125787 chr4 87996623 Intron 7 33638 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:0.962;0.86 LEAD_SNP rs1054627 chr4 88732692 Coding 7 ASSOCIATION 21533022 Bone mineral density 6.09691001301 IBSP FUNCTIONAL_SNP rs1054629 chr4 88732918 Coding 7 226 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.569 FUNCTIONAL_SNP rs12505482 chr4 88730210 Intron 6 2482 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6857696 chr4 88701522 Intergenic 7 31170 CEU:0.947;0.812, CHB:0.888;0.65 LEAD_SNP rs1471403 chr4 88775243 Intergenic 5a ASSOCIATION 19801982 Bone mineral density (hip) 6.09691001301 MEPE - HSP90AB3P ASSOCIATION 19801982 Bone mineral density (spine) 7.69897000434 MEPE - HSP90AB3P FUNCTIONAL_SNP rs6532023 chr4 88773849 Intergenic 6 1394 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7683315 chr4 88773095 Intergenic 7 2148 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1471399 chr4 88774073 Intergenic 7 1170 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6532022 chr4 88773734 Intergenic 7 1509 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2725236 chr4 88919106 Intergenic 6 ASSOCIATION 21490707 Caffeine consumption 5.30102999566 SPP1 - PKD2 LEAD_SNP rs2231142 chr4 89052323 Coding 5b ASSOCIATION 19503597 Serum uric acid 10.0 ABCG2 ASSOCIATION 19503597 Serum uric acid 17.6989700043 ABCG2 ASSOCIATION 18834626 Serum urate 59.5228787453 ABCG2 FUNCTIONAL_SNP rs1481012 chr4 89039082 Intron 6 13241 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4148155 chr4 89054667 Intron 6 2344 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs893971 chr4 89203670 Intron 6 ASSOCIATION 18846501 Conduct disorder (interaction) 5.15490195999 PPM1K FUNCTIONAL_SNP rs6819344 chr4 89197519 Intron 3a 6151 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs4423843 chr4 89206756 Intron 5b 3086 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs881561 chr4 89203042 Intron 7 628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2869926 chr4 89201376 Intron 7 2294 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17789147 chr4 89193640 Intron 7 10030 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs34813495 chr4 89213077 Intron 7 9407 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs6821589 chr4 89192792 Intron 7 10878 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2869967 chr4 89869332 Intron 5a ASSOCIATION 20010835 Pulmonary function 7.0 FAM13A FUNCTIONAL_SNP rs2045517 chr4 89870964 Intron 3a 1632 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2869966 chr4 89869078 Intron 5a 254 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.732 FUNCTIONAL_SNP rs6852928 chr4 89926193 Intron 6 56861 CEU:0.955;0.804, CHB:0.843;0.648, JPT:0.88;0.662 FUNCTIONAL_SNP rs6849143 chr4 89928489 Intron 7 59157 CEU:0.955;0.804, CHB:0.843;0.648, JPT:0.88;0.662 LEAD_SNP rs7671167 chr4 89883979 Intron 6 ASSOCIATION 20173748 Chronic obstructive pulmonary disease 11.0 FAM13A FUNCTIONAL_SNP rs2013701 chr4 89885086 Intron 4 1107 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.703 FUNCTIONAL_SNP rs2904259 chr4 89885714 Intron 4 1735 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs1903003 chr4 89886297 Intron 5b 2318 CEU:1.0;0.852, CHB:1.0;0.79, JPT:1.0;0.897, YRI:1.0;0.628 LEAD_SNP rs16996151 chr4 89978800 Intron 7 ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 5.22184874962 FAM13A LEAD_SNP rs356219 chr4 90637601 Intergenic 7 ASSOCIATION 21292315 Parkinson's disease 46.6989700043 GPRIN3 - SNCA FUNCTIONAL_SNP rs356165 chr4 90646886 Exon,non-coding 6 9285 CEU:1.0;0.962, CHB:1.0;0.913, JPT:1.0;1.0, YRI:0.953;0.869 FUNCTIONAL_SNP rs356220 chr4 90641340 Intergenic 6 3739 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.901 LEAD_SNP rs11931074 chr4 90639515 Intergenic 7 ASSOCIATION 19915576 Parkinson's disease 16.15490196 GPRIN3 - SNCA FUNCTIONAL_SNP rs3756054 chr4 90674451 Intron 2b 34936 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs3857059 chr4 90675238 Intron 4 35723 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs17016071 chr4 90644281 Intergenic 5b 4766 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs8180209 chr4 90644454 Intergenic 5b 4939 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs8180214 chr4 90644508 Intergenic 5b 4993 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs3857052 chr4 90643857 Intergenic 6 4342 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs7661330 chr4 90663670 Intron 7 24155 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs7681815 chr4 90638614 Intergenic 7 901 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7675290 chr4 90645003 Intergenic 7 5488 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs3857051 chr4 90643697 Intergenic 7 4182 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs7681312 chr4 90638527 Intergenic 7 988 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7436973 chr4 90643921 Intergenic 7 4406 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs10003708 chr4 90643051 Intergenic 7 3536 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3775423 chr4 90657491 Intron 7 17976 CEU:1.0;1.0, CHB:1.0;0.83, JPT:1.0;0.863, YRI:0.953;0.909 LEAD_SNP rs356220 chr4 90641340 Intergenic 6 ASSOCIATION 21738487 Parkinson's disease 18.6989700043 GPRIN3 - SNCA ASSOCIATION 21084426 Parkinson's disease 7.52287874528 GPRIN3 - SNCA ASSOCIATION 21044948 Parkinson's disease 15.0457574906 GPRIN3 - SNCA ASSOCIATION 20711177 Parkinson's disease 10.5228787453 GPRIN3 - SNCA FUNCTIONAL_SNP rs356165 chr4 90646886 Exon,non-coding 6 5546 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.952, YRI:1.0;0.951 FUNCTIONAL_SNP rs356219 chr4 90637601 Intergenic 7 3739 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.901 LEAD_SNP rs2736990 chr4 90678541 Intron 3a ASSOCIATION 20070850 Parkinson's disease 7.15490195999 SNCA ASSOCIATION 19915575 Parkinson's disease 15.6989700043 SNCA FUNCTIONAL_SNP rs356168 chr4 90674431 Intron 2b 4110 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs356200 chr4 90668614 Intron 7 9927 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs356204 chr4 90663542 Intron 7 14999 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs356221 chr4 90642464 Intergenic 7 36077 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.95, YRI:1.0;0.924 LEAD_SNP rs6532197 chr4 90797301 Intergenic 5b ASSOCIATION 19915575 Parkinson's disease 7.0 SNCA - MMRN1 FUNCTIONAL_SNP rs1372511 chr4 90811049 Intron 5a 13748 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.805;0.648 FUNCTIONAL_SNP rs10516849 chr4 90789539 Intergenic 5b 7762 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.857;0.558 FUNCTIONAL_SNP rs6828095 chr4 90807512 Intron 6 10211 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.936;0.877, YRI:1.0;0.882 FUNCTIONAL_SNP rs11727074 chr4 90795281 Intergenic 7 2020 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.924;0.853 LEAD_SNP rs11097407 chr4 95146135 Intron 6 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.39794000867 SMARCAD1 FUNCTIONAL_SNP rs17021364 chr4 95047893 Intron 4 98242 CEU:1.0;1.0, CHB:0.94;0.72, JPT:0.938;0.829 FUNCTIONAL_SNP rs1605923 chr4 95063631 Intron 5a 82504 CEU:1.0;0.88 FUNCTIONAL_SNP rs12500027 chr4 95107918 Intron 6 38217 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.781 FUNCTIONAL_SNP rs12502728 chr4 94999892 Intergenic 6 146243 CEU:1.0;0.959, CHB:0.867;0.55, JPT:0.871;0.715 FUNCTIONAL_SNP rs10433970 chr4 95134165 Intron 6 11970 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs12502748 chr4 94999939 Intergenic 6 146196 CEU:1.0;0.959, CHB:0.883;0.668, JPT:0.934;0.774 FUNCTIONAL_SNP rs1509950 chr4 94994045 Intergenic 7 152090 CEU:1.0;0.883, CHB:0.883;0.668, JPT:0.932;0.767 FUNCTIONAL_SNP rs12498518 chr4 95070236 Intron 7 75899 CEU:1.0;0.88 FUNCTIONAL_SNP rs10005131 chr4 94995064 Intergenic 7 151071 CEU:1.0;0.883, CHB:0.883;0.668, JPT:0.934;0.774 FUNCTIONAL_SNP rs2048299 chr4 94993624 Intergenic 7 152511 CEU:1.0;0.883, CHB:0.883;0.668, JPT:0.934;0.774 FUNCTIONAL_SNP rs11729256 chr4 95027272 Intergenic 7 118863 CEU:0.955;0.838 FUNCTIONAL_SNP rs6813655 chr4 94995296 Intergenic 7 150839 CEU:1.0;0.883, CHB:0.88;0.66, JPT:0.934;0.774 LEAD_SNP rs12500426 chr4 95514609 Intron 6 ASSOCIATION 19767753 Prostate cancer 11.0 PDLIM5 FUNCTIONAL_SNP rs12639887 chr4 95505975 Exon,non-coding 7 8634 CEU:0.919;0.812, CHB:1.0;0.909, JPT:1.0;0.682 FUNCTIONAL_SNP rs7662466 chr4 95509763 Intron 5a 4846 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11732687 chr4 95555833 Intron 5a 41224 CEU:0.958;0.847, CHB:0.875;0.552 FUNCTIONAL_SNP rs4634230 chr4 95510638 Intron 5b 3971 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.895 FUNCTIONAL_SNP rs3805266 chr4 95500223 Intron 5b 14386 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.953;0.798 FUNCTIONAL_SNP rs12639623 chr4 95525186 Intron 7 10577 CEU:0.961;0.923, CHB:1.0;0.909, JPT:0.952;0.906 FUNCTIONAL_SNP rs13135257 chr4 95527759 Intron 7 13150 CEU:0.958;0.847, CHB:1.0;0.829, JPT:0.938;0.63 FUNCTIONAL_SNP rs12649976 chr4 95544285 Intron 7 29676 CEU:0.959;0.85, CHB:1.0;0.829, JPT:0.938;0.63 FUNCTIONAL_SNP rs6854173 chr4 95537849 Intron 7 23240 CEU:0.961;0.923, CHB:1.0;0.954, JPT:0.952;0.906 FUNCTIONAL_SNP rs10033326 chr4 95526241 Intron 7 11632 CEU:0.961;0.923, CHB:1.0;0.954, JPT:0.951;0.904 FUNCTIONAL_SNP rs2047025 chr4 95533967 Intron 7 19358 CEU:0.959;0.85, CHB:0.901;0.774 FUNCTIONAL_SNP rs902981 chr4 95494126 Intron 7 20483 CEU:0.96;0.885, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs3805263 chr4 95504312 Intron 7 10297 CEU:0.916;0.839, CHB:1.0;0.951, JPT:1.0;0.675 FUNCTIONAL_SNP rs3843444 chr4 95503578 Intron 7 11031 CEU:0.96;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.847 FUNCTIONAL_SNP rs11724023 chr4 95558854 Intron 7 44245 CEU:0.958;0.847, CHB:0.875;0.552 LEAD_SNP rs17021918 chr4 95562877 Intron 5b ASSOCIATION 19767753 Prostate cancer 14.3979400087 PDLIM5 FUNCTIONAL_SNP rs2452600 chr4 95496882 Coding 7 65995 CEU:0.947;0.81, CHB:0.864;0.525 FUNCTIONAL_SNP rs1043848 chr4 95587675 Exon,non-coding 7 24798 CEU:1.0;0.952, CHB:1.0;0.901, JPT:1.0;0.947, YRI:1.0;0.756 FUNCTIONAL_SNP rs10590 chr4 95586279 Exon,non-coding 7 23402 CEU:1.0;0.952, CHB:1.0;0.901, JPT:1.0;1.0, YRI:1.0;0.942 FUNCTIONAL_SNP rs7681843 chr4 95595308 Intergenic 3a 32431 CEU:1.0;0.947, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.915;0.595 FUNCTIONAL_SNP rs2510767 chr4 95484001 Intron 5a 78876 CEU:0.949;0.818, CHB:0.929;0.531 FUNCTIONAL_SNP rs6822544 chr4 95582359 Intron 5b 19482 CEU:1.0;0.95, CHB:1.0;0.898, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2136486 chr4 95571976 Intron 5b 9099 CEU:1.0;0.867, YRI:1.0;0.593 FUNCTIONAL_SNP rs998071 chr4 95591976 Intergenic 5b 29099 CEU:1.0;0.952, CHB:1.0;0.854, JPT:1.0;0.947, YRI:1.0;1.0 FUNCTIONAL_SNP rs2452597 chr4 95493246 Intron 5b 69631 CEU:0.947;0.81 FUNCTIONAL_SNP rs17021972 chr4 95590158 Intergenic 5b 27281 CEU:1.0;0.95, CHB:1.0;0.901, JPT:1.0;1.0, YRI:1.0;0.796 FUNCTIONAL_SNP rs13121500 chr4 95577290 Intron 6 14413 CEU:1.0;1.0, CHB:1.0;0.898, JPT:1.0;1.0, YRI:1.0;0.936 FUNCTIONAL_SNP rs10015716 chr4 95548550 Intron 6 14327 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12510147 chr4 95521863 Intron 6 41014 CEU:0.946;0.848, CHB:0.864;0.506 FUNCTIONAL_SNP rs12511169 chr4 95573998 Intron 7 11121 CEU:1.0;0.867, YRI:1.0;0.942 FUNCTIONAL_SNP rs7674144 chr4 95554249 Intron 7 8628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.884 FUNCTIONAL_SNP rs12500116 chr4 95579739 Intron 7 16862 CEU:1.0;1.0, CHB:0.946;0.849, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4699316 chr4 95579366 Intron 7 16489 CEU:1.0;1.0, CHB:1.0;0.901, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3762876 chr4 95589477 Intergenic 7 26600 CEU:1.0;0.952, CHB:1.0;0.901, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs2280003 chr4 95575601 Intron 7 12724 CEU:1.0;1.0, CHB:1.0;0.901, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs2452598 chr4 95493721 Intron 7 69156 CEU:0.947;0.81 LEAD_SNP rs1859156 chr4 95834034 Intron 6 ASSOCIATION 20732626 Attention deficit hyperactivity disorder 5.69897000434 BMPR1B LEAD_SNP rs12643654 chr4 96159817 Intron 7 ASSOCIATION 20932310 P-tau181p 6.30102999566 UNC5C LEAD_SNP rs10516430 chr4 99337881 Intron 6 ASSOCIATION 19260141 Biochemical measures 5.22184874962 RAP1GDS1 LEAD_SNP rs1229984 chr4 100239319 Coding 5b ASSOCIATION 21437268 Upper aerodigestive tract cancers 20.0 ADH1B ASSOCIATION 19698717 Esophageal cancer 23.096910013 ADH1B LEAD_SNP rs1789891 chr4 100250419 Intergenic 7 ASSOCIATION 18846501 Conduct disorder (interaction) 5.52287874528 ADH1B - ADH1C LEAD_SNP rs1789924 chr4 100274286 Intergenic 4 ASSOCIATION 21437268 Upper aerodigestive tract cancers 6.52287874528 ADH1C FUNCTIONAL_SNP rs1693482 chr4 100263965 Coding 7 10321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs698 chr4 100260789 Coding 7 13497 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1662060 chr4 100259841 Intron 5b 14445 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1154442 chr4 100287849 Intergenic 5b 13563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1229854 chr4 100282550 Intergenic 5b 8264 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1693470 chr4 100279489 Intergenic 5b 5203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs980972 chr4 100279247 Intergenic 5b 4961 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1238015 chr4 100281134 Intergenic 5b 6848 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1154435 chr4 100285148 Intergenic 6 10862 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2298755 chr4 100261038 Intron 6 13248 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs904096 chr4 100263584 Intron 6 10702 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1693476 chr4 100260274 Intron 6 14012 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1693469 chr4 100275902 Intergenic 6 1616 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1789898 chr4 100258336 Intron 6 15950 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs1662051 chr4 100267239 Intron 6 7047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1662058 chr4 100262759 Intron 6 11527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1154433 chr4 100253708 Intergenic 7 20578 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1789911 chr4 100263778 Intron 7 10508 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs283415 chr4 100270607 Intron 7 3679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1229978 chr4 100256199 Intergenic 7 18087 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs904095 chr4 100263383 Intron 7 10903 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1229851 chr4 100283825 Intergenic 7 9539 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1789892 chr4 100250658 Intergenic 7 23628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1789896 chr4 100256984 Intergenic 7 17302 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1789903 chr4 100262041 Intron 7 12245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1662039 chr4 100279684 Intergenic 7 5398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2851300 chr4 100279824 Intergenic 7 5538 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1631460 chr4 100264620 Intron 7 9666 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1693424 chr4 100265236 Intron 7 9050 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs991316 chr4 100322445 Intergenic 6 ASSOCIATION 19609347 Hypertension 5.30102999566 ADH1C - ADH7 LEAD_SNP rs971074 chr4 100341861 Coding 7 ASSOCIATION 21437268 Upper aerodigestive tract cancers 16.0457574906 ADH7 FUNCTIONAL_SNP rs1573496 chr4 100349669 Coding 7 7808 CEU:1.0;1.0 FUNCTIONAL_SNP rs17529509 chr4 100351436 Intron 5b 9575 CEU:1.0;1.0 FUNCTIONAL_SNP rs2165672 chr4 100372976 Intergenic 6 31115 CEU:1.0;1.0 FUNCTIONAL_SNP rs17589306 chr4 100368786 Intergenic 7 26925 CEU:1.0;1.0 LEAD_SNP rs11735070 chr4 100713765 Intergenic 6 ASSOCIATION 20195266 Response to antipsychotic treatment 6.0 MTTP - DAPP1 FUNCTIONAL_SNP rs12152585 chr4 100712344 Intergenic 5b 1421 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12152555 chr4 100712375 Intergenic 5b 1390 CEU:1.0;0.893, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12152556 chr4 100712422 Intergenic 5b 1343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13134954 chr4 100713621 Intergenic 6 144 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4699386 chr4 100723491 Intergenic 6 9726 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10031644 chr4 100725322 Intergenic 7 11557 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs11097675 chr4 100708686 Intergenic 7 5079 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs733160 chr4 100724897 Intergenic 7 11132 CEU:1.0;1.0 FUNCTIONAL_SNP rs1365496 chr4 100724900 Intergenic 7 11135 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs1365497 chr4 100721072 Intergenic 7 7307 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2866172 chr4 100721235 Intergenic 7 7470 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1405687 chr4 101931826 Intergenic 7 ASSOCIATION 20195266 Response to antipsychotic treatment 7.30102999566 EMCN - PPP3CA FUNCTIONAL_SNP rs12511064 chr4 101900871 Intergenic 5b 30955 CEU:1.0;1.0, CHB:0.924;0.744, JPT:0.923;0.666, YRI:1.0;0.588 FUNCTIONAL_SNP rs13114543 chr4 101904866 Intergenic 5b 26960 CEU:1.0;1.0, CHB:0.939;0.831, JPT:0.935;0.74, YRI:1.0;0.589 FUNCTIONAL_SNP rs4699014 chr4 101906493 Intergenic 5b 25333 CEU:1.0;1.0, CHB:0.939;0.831, JPT:0.937;0.747, YRI:1.0;0.589 LEAD_SNP rs10516487 chr4 102751076 Coding 7 ASSOCIATION 18204447 Systemic lupus erythematosus 9.39794000867 BANK1 FUNCTIONAL_SNP rs4637409 chr4 102753408 Intron 5b 2332 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs17266594 chr4 102750922 Intron 7 154 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs2080820 chr4 102758403 Intron 7 7327 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.868 LEAD_SNP rs13107325 chr4 103188709 Coding 7 ASSOCIATION 20935630 Body mass index 12.6989700043 SLC39A8 FUNCTIONAL_SNP rs1813006 chr4 103001649 Intergenic 6 187060 CEU:1.0;0.828 LEAD_SNP rs7665090 chr4 103551603 Intergenic 6 ASSOCIATION 21399635 Primary biliary cirrhosis 11.3979400087 NFKB1 - MANBA FUNCTIONAL_SNP rs2866413 chr4 103557077 Coding 7 5474 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs2272697 chr4 103555992 Coding 7 4389 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs1054029 chr4 103553053 Exon,non-coding 7 1450 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs7665854 chr4 103551909 Intergenic 3a 306 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7690123 chr4 103551759 Intergenic 4 156 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7665659 chr4 103551818 Intergenic 4 215 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1077358 chr4 103553926 Intron 5b 2323 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs735403 chr4 103553543 Intron 5b 1940 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs735404 chr4 103553665 Intron 5b 2062 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs735405 chr4 103553916 Intron 5b 2313 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7664828 chr4 103551376 Intergenic 5b 227 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7699678 chr4 103550096 Intergenic 5b 1507 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2866407 chr4 103554108 Intron 5b 2505 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6810869 chr4 103558514 Intron 5b 6911 CEU:0.958;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs2125211 chr4 103559876 Intron 5b 8273 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs909349 chr4 103556316 Intron 6 4713 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.841 FUNCTIONAL_SNP rs4586937 chr4 103556462 Intron 6 4859 CEU:1.0;0.96, CHB:1.0;0.955, JPT:1.0;1.0, YRI:0.949;0.629 FUNCTIONAL_SNP rs6813322 chr4 103555619 Intron 6 4016 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs5026474 chr4 103554810 Intron 6 3207 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.918 FUNCTIONAL_SNP rs4496586 chr4 103557311 Intron 6 5708 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs3733202 chr4 103556861 Intron 6 5258 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.949;0.629 FUNCTIONAL_SNP rs4547797 chr4 103557192 Intron 6 5589 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs2903283 chr4 103557753 Intron 6 6150 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs228611 chr4 103561709 Intron 6 10106 CEU:0.958;0.88, CHB:1.0;0.911, JPT:0.951;0.905 FUNCTIONAL_SNP rs7674640 chr4 103540780 Intergenic 6 10823 CEU:1.0;0.884, CHB:1.0;0.853, JPT:1.0;0.74, YRI:0.798;0.555 FUNCTIONAL_SNP rs6839064 chr4 103555676 Intron 6 4073 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs11724614 chr4 103550248 Intergenic 6 1355 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4013 chr4 103552813 Intergenic 6 1210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2272696 chr4 103555821 Intron 6 4218 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs5026476 chr4 103554910 Intron 7 3307 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs12644381 chr4 103552430 Intergenic 7 827 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7677509 chr4 103550006 Intergenic 7 1597 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6812747 chr4 103555417 Intron 7 3814 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs5026472 chr4 103554773 Intron 7 3170 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs5026473 chr4 103554793 Intron 7 3190 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs11727546 chr4 103557664 Intron 7 6061 CEU:1.0;0.96, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.955;0.838 FUNCTIONAL_SNP rs2866412 chr4 103554350 Intron 7 2747 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2866414 chr4 103557219 Intron 7 5616 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs13106304 chr4 103554975 Intron 7 3372 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs7699231 chr4 103550075 Intergenic 7 1528 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12498722 chr4 103554522 Intron 7 2919 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs1054037 chr4 103552709 Intergenic 7 1106 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13106325 chr4 103554992 Intron 7 3389 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs6533020 chr4 103558805 Intron 7 7202 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs6533021 chr4 103558853 Intron 7 7250 CEU:1.0;0.958, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs2272695 chr4 103555803 Intron 7 4200 CEU:1.0;0.96, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.958 LEAD_SNP rs4699052 chr4 104137790 Intergenic 6 ASSOCIATION 19483681 Testicular germ cell tumor 6.69897000434 CENPE - TACR3 FUNCTIONAL_SNP rs6816055 chr4 104143160 Intergenic 6 5370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7694190 chr4 104168017 Intergenic 6 30227 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs7661702 chr4 104140129 Intergenic 7 2339 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6533066 chr4 104163607 Intergenic 7 25817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.878 FUNCTIONAL_SNP rs6533059 chr4 104133376 Intergenic 7 4414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10005603 chr4 105844273 Intron 6 ASSOCIATION 20694014 Tuberculosis 5.15490195999 RPL6P14 - TET2 LEAD_SNP rs7679673 chr4 106061534 Intron 5b ASSOCIATION 19767753 Prostate cancer 13.5228787453 RPL6P14 - TET2 FUNCTIONAL_SNP rs10007915 chr4 106065308 Intergenic 2b 3774 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7669317 chr4 106457330 Intergenic 7 ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 7.09691001301 ATP5EP1 - ARHGEF38 LEAD_SNP rs11727189 chr4 106619140 Intron 7 ASSOCIATION 20010835 Pulmonary function 16.3010299957 INTS12 FUNCTIONAL_SNP rs17036076 chr4 106575269 Coding 7 43871 CEU:1.0;1.0 FUNCTIONAL_SNP rs11727735 chr4 106631870 Intron 2b 12730 CEU:1.0;1.0 FUNCTIONAL_SNP rs17035960 chr4 106531846 Intron 3a 87294 CEU:1.0;0.824 FUNCTIONAL_SNP rs10516527 chr4 106734346 Intron 5a 115206 CEU:1.0;1.0 FUNCTIONAL_SNP rs11097901 chr4 106729933 Intron 5b 110793 CEU:1.0;1.0 FUNCTIONAL_SNP rs10516526 chr4 106688904 Intron 5b 69764 CEU:1.0;1.0 FUNCTIONAL_SNP rs11732298 chr4 106701679 Intron 5b 82539 CEU:1.0;1.0 FUNCTIONAL_SNP rs11728716 chr4 106755996 Intron 5b 136856 CEU:1.0;1.0 FUNCTIONAL_SNP rs11725523 chr4 106517866 Intron 5b 101274 CEU:1.0;1.0 FUNCTIONAL_SNP rs10050159 chr4 106765915 Intron 5b 146775 CEU:1.0;1.0 FUNCTIONAL_SNP rs11727745 chr4 106716527 Intron 6 97387 CEU:1.0;1.0 FUNCTIONAL_SNP rs11728044 chr4 106604786 Intron 6 14354 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036142 chr4 106634736 Intron 6 15596 CEU:1.0;1.0 FUNCTIONAL_SNP rs11724839 chr4 106638256 Intron 6 19116 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036225 chr4 106710092 Intron 6 90952 CEU:1.0;1.0 FUNCTIONAL_SNP rs10516525 chr4 106668025 Intron 6 48885 CEU:1.0;1.0 FUNCTIONAL_SNP rs10516528 chr4 106739593 Intron 6 120453 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036090 chr4 106593574 Intron 6 25566 CEU:1.0;1.0 FUNCTIONAL_SNP rs1374531 chr4 106523932 Intron 6 95208 CEU:1.0;1.0 FUNCTIONAL_SNP rs11726569 chr4 106606608 Intron 6 12532 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036139 chr4 106632657 Intron 6 13517 CEU:1.0;1.0 FUNCTIONAL_SNP rs12374256 chr4 106617361 Intron 6 1779 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036156 chr4 106663234 Intron 6 44094 CEU:1.0;1.0 FUNCTIONAL_SNP rs11731417 chr4 106746012 Intron 7 126872 CEU:1.0;1.0 FUNCTIONAL_SNP rs7676975 chr4 106763811 Intron 7 144671 CEU:1.0;1.0 FUNCTIONAL_SNP rs10050333 chr4 106765813 Intron 7 146673 CEU:1.0;1.0 FUNCTIONAL_SNP rs17035917 chr4 106520742 Intron 7 98398 CEU:1.0;1.0 FUNCTIONAL_SNP rs11736859 chr4 106708785 Intron 7 89645 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036230 chr4 106715148 Intron 7 96008 CEU:1.0;1.0 FUNCTIONAL_SNP rs11732650 chr4 106754231 Intron 7 135091 CEU:1.0;1.0 FUNCTIONAL_SNP rs11735851 chr4 106697254 Intron 7 78114 CEU:1.0;1.0 FUNCTIONAL_SNP rs11726124 chr4 106766496 Intron 7 147356 CEU:1.0;1.0 FUNCTIONAL_SNP rs11733225 chr4 106705363 Intron 7 86223 CEU:1.0;1.0 FUNCTIONAL_SNP rs11735213 chr4 106527508 Intron 7 91632 CEU:1.0;1.0 FUNCTIONAL_SNP rs11726674 chr4 106745751 Intron 7 126611 CEU:1.0;1.0 FUNCTIONAL_SNP rs11723225 chr4 106746065 Intron 7 126925 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036123 chr4 106622190 Intron 7 3050 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036129 chr4 106624529 Intron 7 5389 CEU:1.0;1.0 FUNCTIONAL_SNP rs11733223 chr4 106765525 Intron 7 146385 CEU:1.0;1.0 FUNCTIONAL_SNP rs11733287 chr4 106705339 Intron 7 86199 CEU:1.0;1.0 FUNCTIONAL_SNP rs11722225 chr4 106766430 Intron 7 147290 CEU:1.0;1.0 FUNCTIONAL_SNP rs11727348 chr4 106679848 Intron 7 60708 CEU:1.0;1.0 LEAD_SNP rs10516526 chr4 106688904 Intron 5b ASSOCIATION 20010834 Pulmonary function 22.6989700043 GSTCD FUNCTIONAL_SNP rs17036076 chr4 106575269 Coding 7 113635 CEU:1.0;1.0 FUNCTIONAL_SNP rs11727735 chr4 106631870 Intron 2b 57034 CEU:1.0;1.0 FUNCTIONAL_SNP rs17035960 chr4 106531846 Intron 3a 157058 CEU:1.0;0.879 FUNCTIONAL_SNP rs7660534 chr4 106796047 Intergenic 3a 107143 CEU:1.0;0.866 FUNCTIONAL_SNP rs10516527 chr4 106734346 Intron 5a 45442 CEU:1.0;1.0 FUNCTIONAL_SNP rs10050159 chr4 106765915 Intron 5b 77011 CEU:1.0;1.0 FUNCTIONAL_SNP rs11725523 chr4 106517866 Intron 5b 171038 CEU:1.0;1.0 FUNCTIONAL_SNP rs11097901 chr4 106729933 Intron 5b 41029 CEU:1.0;1.0 FUNCTIONAL_SNP rs11732298 chr4 106701679 Intron 5b 12775 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11728716 chr4 106755996 Intron 5b 67092 CEU:1.0;1.0 FUNCTIONAL_SNP rs11724839 chr4 106638256 Intron 6 50648 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10516525 chr4 106668025 Intron 6 20879 CEU:1.0;1.0 FUNCTIONAL_SNP rs10516528 chr4 106739593 Intron 6 50689 CEU:1.0;1.0 FUNCTIONAL_SNP rs10516529 chr4 106799316 Intergenic 6 110412 CEU:1.0;0.866 FUNCTIONAL_SNP rs17036225 chr4 106710092 Intron 6 21188 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11728044 chr4 106604786 Intron 6 84118 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11726569 chr4 106606608 Intron 6 82296 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11730660 chr4 106800379 Intergenic 6 111475 CEU:1.0;0.866 FUNCTIONAL_SNP rs12374256 chr4 106617361 Intron 6 71543 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11727745 chr4 106716527 Intron 6 27623 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17036090 chr4 106593574 Intron 6 95330 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1374531 chr4 106523932 Intron 6 164972 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036139 chr4 106632657 Intron 6 56247 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17036142 chr4 106634736 Intron 6 54168 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17036156 chr4 106663234 Intron 6 25670 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7676975 chr4 106763811 Intron 7 74907 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036341 chr4 106796829 Intergenic 7 107925 CEU:1.0;0.866 FUNCTIONAL_SNP rs17331332 chr4 106808107 Intergenic 7 119203 CEU:1.0;0.866 FUNCTIONAL_SNP rs11732650 chr4 106754231 Intron 7 65327 CEU:1.0;1.0 FUNCTIONAL_SNP rs11735213 chr4 106527508 Intron 7 161396 CEU:1.0;1.0 FUNCTIONAL_SNP rs11733223 chr4 106765525 Intron 7 76621 CEU:1.0;1.0 FUNCTIONAL_SNP rs11733225 chr4 106705363 Intron 7 16459 CEU:1.0;1.0 FUNCTIONAL_SNP rs11733287 chr4 106705339 Intron 7 16435 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11723225 chr4 106746065 Intron 7 57161 CEU:1.0;1.0 FUNCTIONAL_SNP rs11736859 chr4 106708785 Intron 7 19881 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10050333 chr4 106765813 Intron 7 76909 CEU:1.0;1.0 FUNCTIONAL_SNP rs11735851 chr4 106697254 Intron 7 8350 CEU:1.0;1.0 FUNCTIONAL_SNP rs11726124 chr4 106766496 Intron 7 77592 CEU:1.0;1.0 FUNCTIONAL_SNP rs17035917 chr4 106520742 Intron 7 168162 CEU:1.0;1.0 FUNCTIONAL_SNP rs11726674 chr4 106745751 Intron 7 56847 CEU:1.0;1.0 FUNCTIONAL_SNP rs11727189 chr4 106619140 Intron 7 69764 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036123 chr4 106622190 Intron 7 66714 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17036129 chr4 106624529 Intron 7 64375 CEU:1.0;1.0 FUNCTIONAL_SNP rs17036230 chr4 106715148 Intron 7 26244 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11731417 chr4 106746012 Intron 7 57108 CEU:1.0;1.0 FUNCTIONAL_SNP rs11722225 chr4 106766430 Intron 7 77526 CEU:1.0;1.0 FUNCTIONAL_SNP rs11727348 chr4 106679848 Intron 7 9056 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10516541 chr4 108115222 Intron 7 ASSOCIATION 17903307 Mean forced vital capacity from 2 exams 5.39794000867 DKK2 - RAC1P5 FUNCTIONAL_SNP rs7671664 chr4 108102412 Intron 7 12810 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs12511906 chr4 108105844 Intron 7 9378 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12512114 chr4 108086688 Intron 7 28534 CEU:1.0;1.0, CHB:0.935;0.823, JPT:1.0;0.89, YRI:1.0;0.825 LEAD_SNP rs4956211 chr4 109723126 Intergenic 7 ASSOCIATION 21408207 Systemic lupus erythematosus 6.0 AGXT2L1 - COL25A1 FUNCTIONAL_SNP rs9996734 chr4 109714858 Intergenic 4 8268 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.917;0.776 FUNCTIONAL_SNP rs6834699 chr4 109717263 Intergenic 6 5863 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.915;0.804 FUNCTIONAL_SNP rs4956056 chr4 109713288 Intergenic 6 9838 CEU:0.958;0.882, JPT:1.0;0.623, YRI:0.79;0.599 FUNCTIONAL_SNP rs17039317 chr4 109714131 Intergenic 6 8995 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.949;0.718 FUNCTIONAL_SNP rs17588222 chr4 109724528 Intergenic 6 1402 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.698 FUNCTIONAL_SNP rs17528213 chr4 109713981 Intergenic 7 9145 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1452695 chr4 109715709 Intergenic 7 7417 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.913;0.767 FUNCTIONAL_SNP rs4956061 chr4 109720787 Intergenic 7 2339 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.911;0.829 FUNCTIONAL_SNP rs4956213 chr4 109723334 Intergenic 7 208 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.814;0.559 FUNCTIONAL_SNP rs17039326 chr4 109714172 Intergenic 7 8954 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.914;0.714 FUNCTIONAL_SNP rs9992299 chr4 109718497 Intergenic 7 4629 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.914;0.769 FUNCTIONAL_SNP rs9996286 chr4 109714529 Intergenic 7 8597 CEU:1.0;0.96, CHB:1.0;0.658, JPT:1.0;0.945, YRI:0.917;0.776 LEAD_SNP rs2285714 chr4 110638810 Coding 5b ASSOCIATION 20385819 Age-related macular degeneration 6.52287874528 PLA2G12A FUNCTIONAL_SNP rs17586561 chr4 110648632 Intron 7 9822 CEU:1.0;0.863 LEAD_SNP rs10033900 chr4 110659067 Intergenic 6 ASSOCIATION 21665990 Age-related macular degeneration 9.39794000867 PLA2G12A - CFI ASSOCIATION 20385826 Age-related macular degeneration 8.04575749056 PLA2G12A - CFI FUNCTIONAL_SNP rs17586561 chr4 110648632 Intron 7 10435 CEU:0.949;0.819 LEAD_SNP rs6847149 chr4 110800097 Intergenic 5b ASSOCIATION 17903301 Exercise treadmill test traits 5.52287874528 LRIT3 - KRT19P3 LEAD_SNP rs17316633 chr4 110825634 Intergenic 6 ASSOCIATION 19896111 Hair morphology 5.04575749056 KRT19P3 - EGF FUNCTIONAL_SNP rs17238095 chr4 110826275 Intergenic 7 641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.793 LEAD_SNP rs10011926 chr4 111026927 Intron 7 ASSOCIATION 20732626 Attention deficit hyperactivity disorder 5.09691001301 ELOVL6 FUNCTIONAL_SNP rs10018930 chr4 111029635 Intron 5b 2708 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.927 FUNCTIONAL_SNP rs4698810 chr4 111019636 Intron 6 7291 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs1482469 chr4 111031236 Intron 6 4309 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs718815 chr4 111024520 Intron 7 2407 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10032613 chr4 111021758 Intron 7 5169 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.895 FUNCTIONAL_SNP rs7669237 chr4 111020741 Intron 7 6186 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs3733623 chr4 111026520 Intron 7 407 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6825911 chr4 111381638 Intergenic 7 ASSOCIATION 21572416 Blood pressure 8.04575749056 ZBED1P - ENPEP ASSOCIATION 21572416 Blood pressure 7.15490195999 ZBED1P - ENPEP FUNCTIONAL_SNP rs6533521 chr4 111390816 Intergenic 5a 9178 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs1879056 chr4 111335604 Intergenic 5b 46034 CEU:1.0;0.942, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs1879057 chr4 111335722 Intergenic 5b 45916 CEU:1.0;0.942, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.886 FUNCTIONAL_SNP rs10033071 chr4 111375852 Intergenic 5b 5786 CEU:1.0;0.945, CHB:1.0;0.909, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs11936009 chr4 111356221 Intergenic 6 25417 CEU:1.0;1.0, CHB:0.952;0.906, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs9994289 chr4 111338277 Intergenic 6 43361 CEU:1.0;0.942, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs4358460 chr4 111382685 Intergenic 6 1047 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs10000348 chr4 111379036 Intergenic 6 2602 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2087160 chr4 111334730 Intergenic 6 46908 CEU:1.0;0.942, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs6533515 chr4 111337864 Intergenic 7 43774 CEU:1.0;0.942, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.923 LEAD_SNP rs17042171 chr4 111708287 Intergenic 5b ASSOCIATION 19597492 Atrial fibrillation 62.3979400087 PITX2 - RPL36AP23 FUNCTIONAL_SNP rs2200732 chr4 111710042 Intergenic 6 1755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2200733 chr4 111710169 Intergenic 6 1882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs1906592 chr4 111709004 Intergenic 6 717 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs1906596 chr4 111712236 Intergenic 6 3949 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;0.955 FUNCTIONAL_SNP rs4540107 chr4 111711102 Intergenic 6 2815 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6817105 chr4 111705768 Intergenic 6 2519 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs4611994 chr4 111711041 Intergenic 7 2754 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1906593 chr4 111711922 Intergenic 7 3635 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 LEAD_SNP rs2200733 chr4 111710169 Intergenic 6 ASSOCIATION 19597491 Atrial fibrillation 14.0 PITX2 - RPL36AP23 ASSOCIATION 18991354 Ischemic stroke 9.69897000434 PITX2 - RPL36AP23 ASSOCIATION 17603472 Atrial fibrillation/atrial flutter 40.5228787453 PITX2 - RPL36AP23 FUNCTIONAL_SNP rs2220427 chr4 111714889 Intergenic 2b 4720 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11944778 chr4 111656967 Intergenic 3a 53202 CEU:1.0;0.848 FUNCTIONAL_SNP rs12646754 chr4 111703572 Intergenic 5a 6597 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1906591 chr4 111708889 Intergenic 5b 1280 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4605724 chr4 111685081 Intergenic 5b 25088 CEU:1.0;1.0, CHB:1.0;0.67, JPT:0.938;0.628 FUNCTIONAL_SNP rs1906617 chr4 111695814 Intergenic 5b 14355 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs4626276 chr4 111649989 Intergenic 5b 60180 CEU:1.0;1.0, JPT:0.936;0.594 FUNCTIONAL_SNP rs17042171 chr4 111708287 Intergenic 5b 1882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs6533527 chr4 111687514 Intergenic 6 22655 CEU:1.0;1.0, CHB:1.0;0.954, JPT:0.94;0.662 FUNCTIONAL_SNP rs2200732 chr4 111710042 Intergenic 6 127 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs1906592 chr4 111709004 Intergenic 6 1165 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17042076 chr4 111652338 Intergenic 6 57831 CEU:1.0;1.0, CHB:0.888;0.681, JPT:0.938;0.627 FUNCTIONAL_SNP rs1906596 chr4 111712236 Intergenic 6 2067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;0.955 FUNCTIONAL_SNP rs17042088 chr4 111654814 Intergenic 6 55355 CEU:1.0;1.0, JPT:0.936;0.594 FUNCTIONAL_SNP rs2129981 chr4 111704199 Intergenic 6 5970 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11930528 chr4 111660194 Intergenic 6 49975 CEU:1.0;1.0, CHB:0.888;0.681, JPT:0.938;0.627 FUNCTIONAL_SNP rs17042059 chr4 111641186 Intergenic 6 68983 CEU:1.0;1.0, JPT:0.855;0.504 FUNCTIONAL_SNP rs17042121 chr4 111677101 Intergenic 6 33068 CEU:1.0;1.0, CHB:1.0;0.67, JPT:0.938;0.628 FUNCTIONAL_SNP rs4540107 chr4 111711102 Intergenic 6 933 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6817105 chr4 111705768 Intergenic 6 4401 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.914 FUNCTIONAL_SNP rs2350269 chr4 111687124 Intergenic 6 23045 CEU:1.0;1.0, CHB:1.0;0.715, JPT:0.923;0.567 FUNCTIONAL_SNP rs11098089 chr4 111654226 Intergenic 6 55943 CEU:1.0;1.0, JPT:0.936;0.594 FUNCTIONAL_SNP rs12644625 chr4 111716513 Intron 7 6344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12647316 chr4 111649251 Intergenic 7 60918 CEU:1.0;1.0, JPT:0.936;0.594 FUNCTIONAL_SNP rs4611994 chr4 111711041 Intergenic 7 872 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs1906593 chr4 111711922 Intergenic 7 1753 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs12639654 chr4 111705295 Intergenic 7 4874 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12646447 chr4 111699326 Intergenic 7 10843 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17042098 chr4 111664158 Intergenic 7 46011 CEU:1.0;1.0, CHB:1.0;0.67, JPT:0.938;0.628 FUNCTIONAL_SNP rs17042102 chr4 111668626 Intergenic 7 41543 CEU:1.0;1.0, CHB:1.0;0.575, JPT:1.0;0.62 FUNCTIONAL_SNP rs1906618 chr4 111695422 Intergenic 7 14747 CEU:1.0;1.0 FUNCTIONAL_SNP rs6847935 chr4 111696651 Intergenic 7 13518 CEU:1.0;1.0, CHB:1.0;0.51, JPT:0.941;0.756 FUNCTIONAL_SNP rs12647393 chr4 111649282 Intergenic 7 60887 CEU:1.0;0.822, CHB:0.862;0.625, JPT:0.933;0.631 FUNCTIONAL_SNP rs10516563 chr4 111677722 Intergenic 7 32447 CEU:1.0;1.0, CHB:0.94;0.691, JPT:0.938;0.628 FUNCTIONAL_SNP rs4543199 chr4 111648140 Intergenic 7 62029 CEU:1.0;1.0, JPT:0.936;0.594 FUNCTIONAL_SNP rs17042144 chr4 111689666 Intergenic 7 20503 CEU:1.0;1.0, CHB:1.0;0.67, JPT:0.938;0.628 FUNCTIONAL_SNP rs4529121 chr4 111645555 Intergenic 7 64614 CEU:1.0;1.0, JPT:0.936;0.594 FUNCTIONAL_SNP rs10019689 chr4 111649869 Intergenic 7 60300 CEU:1.0;1.0, CHB:0.888;0.681, JPT:0.938;0.627 LEAD_SNP rs6843082 chr4 111718067 Exon,non-coding 7 ASSOCIATION 20173747 Atrial fibrillation 27.5228787453 LOC729065 FUNCTIONAL_SNP rs2723334 chr4 111688752 Intergenic 6 29315 CEU:1.0;1.0, CHB:1.0;0.95, JPT:0.941;0.885 FUNCTIONAL_SNP rs13143308 chr4 111714419 Intergenic 6 3648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.925, YRI:1.0;0.912 FUNCTIONAL_SNP rs1906599 chr4 111712686 Intergenic 6 5381 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs2129983 chr4 111704080 Intergenic 6 13987 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939 FUNCTIONAL_SNP rs2466455 chr4 111685615 Intergenic 7 32452 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;0.935 FUNCTIONAL_SNP rs1906615 chr4 111701798 Intergenic 7 16269 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:0.912;0.659 FUNCTIONAL_SNP rs1906616 chr4 111697568 Intergenic 7 20499 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:0.91;0.633 FUNCTIONAL_SNP rs2129982 chr4 111704143 Intergenic 7 13924 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:0.912;0.659 FUNCTIONAL_SNP rs2634074 chr4 111677041 Intergenic 7 41026 CEU:1.0;1.0, CHB:0.944;0.767, JPT:1.0;0.88 LEAD_SNP rs10033464 chr4 111720761 Intergenic 6 ASSOCIATION 17603472 Atrial fibrillation/atrial flutter 10.15490196 PITX2 - RPL36AP23 FUNCTIONAL_SNP rs3853440 chr4 111729609 Intergenic 5b 8848 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs3853441 chr4 111729740 Intergenic 5b 8979 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;0.93, YRI:1.0;0.825 FUNCTIONAL_SNP rs3853442 chr4 111730028 Intergenic 5b 9267 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;0.933, YRI:1.0;0.825 FUNCTIONAL_SNP rs3853443 chr4 111730129 Intergenic 6 9368 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;0.93, YRI:1.0;0.816 FUNCTIONAL_SNP rs6852357 chr4 111714335 Intergenic 7 6426 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.923, YRI:1.0;0.821 FUNCTIONAL_SNP rs2220429 chr4 111727485 Intergenic 7 6724 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;0.933, YRI:1.0;0.956 FUNCTIONAL_SNP rs723364 chr4 111724471 Intergenic 7 3710 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;0.933, YRI:1.0;0.956 FUNCTIONAL_SNP rs1906606 chr4 111723392 Intergenic 7 2631 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;0.933, YRI:1.0;1.0 FUNCTIONAL_SNP rs4833456 chr4 111716307 Intron 7 4454 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.815 FUNCTIONAL_SNP rs2171592 chr4 111720788 Intergenic 7 27 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4032975 chr4 111732238 Intergenic 7 11477 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.811 FUNCTIONAL_SNP rs4124158 chr4 111730194 Intergenic 7 9433 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;0.918, YRI:1.0;1.0 FUNCTIONAL_SNP rs4124159 chr4 111730243 Intergenic 7 9482 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;0.933, YRI:1.0;0.825 LEAD_SNP rs10034228 chr4 112611750 Intergenic 6 ASSOCIATION 21505071 Myopia (pathological) 12.096910013 RPL36AP23 - RPS12P8 FUNCTIONAL_SNP rs2218817 chr4 112611006 Intergenic 5b 744 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.809 FUNCTIONAL_SNP rs922212 chr4 112618815 Intergenic 5b 7065 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs10516571 chr4 112600569 Intergenic 7 11181 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.961 LEAD_SNP rs1585471 chr4 112702635 Intergenic 6 ASSOCIATION 21505071 Myopia (pathological) 5.69897000434 RPL36AP23 - RPS12P8 FUNCTIONAL_SNP rs6815054 chr4 112712361 Intergenic 6 9726 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.87 FUNCTIONAL_SNP rs1381008 chr4 112709990 Intergenic 7 7355 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 LEAD_SNP rs17589290 chr4 112923237 Intron 7 ASSOCIATION 21347282 Coronary heart disease 5.22184874962 RPL36AP23 - RPS12P8 LEAD_SNP rs2389202 chr4 117254289 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 6.39794000867 RLFP1 - TRAM1L1 FUNCTIONAL_SNP rs1565235 chr4 117253752 Intergenic 5b 537 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.819 FUNCTIONAL_SNP rs1489001 chr4 117245430 Intergenic 5b 8859 CEU:1.0;1.0, CHB:1.0;0.857, JPT:1.0;0.935, YRI:0.957;0.879 FUNCTIONAL_SNP rs6821696 chr4 117226309 Intergenic 6 27980 CEU:1.0;0.907, CHB:1.0;0.684, JPT:1.0;0.673 FUNCTIONAL_SNP rs1580534 chr4 117237481 Intergenic 6 16808 CEU:1.0;0.897, CHB:1.0;0.689, JPT:0.914;0.601 FUNCTIONAL_SNP rs11944312 chr4 117268501 Intergenic 6 14212 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs10516627 chr4 117267722 Intergenic 7 13433 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs7664158 chr4 117263297 Intergenic 7 9008 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs17688098 chr4 117227434 Intergenic 7 26855 CEU:1.0;0.907, CHB:1.0;0.684, JPT:1.0;0.673 FUNCTIONAL_SNP rs4321703 chr4 117250422 Intergenic 7 3867 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6533968 chr4 117255159 Intergenic 7 870 CEU:1.0;1.0, CHB:1.0;0.927, JPT:1.0;0.934, YRI:1.0;0.962 FUNCTIONAL_SNP rs7678548 chr4 117258464 Intergenic 7 4175 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10016638 chr4 117242176 Intergenic 7 12113 CEU:1.0;0.907, CHB:1.0;0.684, JPT:1.0;0.673 FUNCTIONAL_SNP rs1489021 chr4 117232552 Intergenic 7 21737 CEU:1.0;0.907, CHB:1.0;0.646, JPT:1.0;0.673 FUNCTIONAL_SNP rs1489022 chr4 117230890 Intergenic 7 23399 CEU:1.0;0.879, CHB:0.91;0.582, JPT:1.0;0.673 LEAD_SNP rs10433903 chr4 118093137 Intergenic 5a ASSOCIATION 19553259 Obesity (extreme) 5.52287874528 TRAM1L1 - RPSAP35 FUNCTIONAL_SNP rs10017902 chr4 118089722 Intergenic 6 3415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6849013 chr4 118068386 Intergenic 6 24751 CEU:1.0;1.0, CHB:0.949;0.858, JPT:1.0;1.0 FUNCTIONAL_SNP rs1992195 chr4 118088458 Intergenic 7 4679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12508849 chr4 118087511 Intergenic 7 5626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13110184 chr4 118080628 Intergenic 7 12509 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs12644587 chr4 118081229 Intergenic 7 11908 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs7699545 chr4 118087527 Intergenic 7 5610 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4318720 chr4 118332255 Intergenic 7 ASSOCIATION 20031603 QT interval 6.09691001301 TRAM1L1 - RPSAP35 FUNCTIONAL_SNP rs17861856 chr4 118318827 Intergenic 6 13428 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs17861857 chr4 118318955 Intergenic 6 13300 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.893;0.52 FUNCTIONAL_SNP rs17861858 chr4 118319741 Intergenic 6 12514 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs17861868 chr4 118326635 Intergenic 6 5620 CEU:1.0;1.0 FUNCTIONAL_SNP rs17861879 chr4 118331506 Intergenic 6 749 CEU:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs12645482 chr4 118325080 Intergenic 7 7175 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs17861852 chr4 118318166 Intergenic 7 14089 CEU:1.0;1.0 LEAD_SNP rs4422476 chr4 118651823 Intergenic 7 ASSOCIATION 21507922 Neutrophil count 5.09691001301 NT5C3P1 - NDST3 FUNCTIONAL_SNP rs4269248 chr4 118650663 Intergenic 6 1160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4540114 chr4 118648297 Intergenic 6 3526 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10024243 chr4 118651065 Intergenic 7 758 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1459543 chr4 118650345 Intergenic 7 1478 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1845344 chr4 120962385 Intergenic 6 ASSOCIATION 21326311 F-cell distribution 5.15490195999 PDE5A - MAD2L1 FUNCTIONAL_SNP rs7677142 chr4 120968893 Intergenic 7 6508 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.888, YRI:1.0;1.0 LEAD_SNP rs10017284 chr4 121513215 Intergenic 7 ASSOCIATION 21326311 F-cell distribution 5.22184874962 SAR1AP3 - PRDM5 FUNCTIONAL_SNP rs1603392 chr4 121517978 Intergenic 6 4763 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1603391 chr4 121518005 Intergenic 6 4790 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs13121680 chr4 121503934 Intergenic 7 9281 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6840627 chr4 121517688 Intergenic 7 4473 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs11733175 chr4 121504784 Intergenic 7 8431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1496256 chr4 121516847 Intergenic 7 3632 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10032714 chr4 121516476 Intergenic 7 3261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1353470 chr4 121527386 Intergenic 7 14171 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.953, YRI:0.961;0.857 LEAD_SNP rs180730 chr4 121801790 Intron 7 ASSOCIATION 17903298 Fasting plasma glucose 5.30102999566 PRDM5 ASSOCIATION 17903298 Fasting plasma glucose 5.22184874962 PRDM5 FUNCTIONAL_SNP rs2667176 chr4 121802653 Intron 5b 863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs1901136 chr4 121802729 Intron 5b 939 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs171069 chr4 121801365 Intron 6 425 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.884 FUNCTIONAL_SNP rs343195 chr4 121800466 Intron 7 1324 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.827 FUNCTIONAL_SNP rs343200 chr4 121797812 Intron 7 3978 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.869 FUNCTIONAL_SNP rs2667175 chr4 121803254 Intron 7 1464 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3114955 chr4 121805990 Intron 7 4200 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs1450472 chr4 121803292 Intron 7 1502 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs343166 chr4 121818722 Intron 7 16932 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 LEAD_SNP rs55645543 chr4 122607178 Intron 5b ASSOCIATION 21685187 Chronic obstructive pulmonary disease 6.30102999566 ANXA5 LEAD_SNP rs7659604 chr4 122665514 Intergenic 5b ASSOCIATION 17554300 Type 2 diabetes 5.04575749056 ANXA5 - TMEM155 FUNCTIONAL_SNP rs7660078 chr4 122665577 Intergenic 5b 63 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7659943 chr4 122665560 Intergenic 5b 46 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs6814995 chr4 122664963 Intergenic 6 551 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs28532673 chr4 122664323 Intergenic 7 1191 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6823488 chr4 122664819 Intergenic 7 695 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7689714 chr4 122665943 Intergenic 7 429 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7689722 chr4 122665955 Intergenic 7 441 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13151961 chr4 123115502 Intron 6 ASSOCIATION 20190752 Celiac disease 26.6989700043 KIAA1109 FUNCTIONAL_SNP rs6814280 chr4 123043662 Intergenic 6 71840 CEU:1.0;0.933 FUNCTIONAL_SNP rs13144652 chr4 123026426 Intergenic 6 89076 CEU:0.916;0.84 FUNCTIONAL_SNP rs13122573 chr4 123273766 Intron 7 158264 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs34135604 chr4 123283993 Intergenic 7 168491 CEU:1.0;1.0 FUNCTIONAL_SNP rs12152645 chr4 123023206 Intergenic 7 92296 CEU:0.928;0.804 FUNCTIONAL_SNP rs13132245 chr4 123049592 Intergenic 7 65910 CEU:1.0;0.933, YRI:1.0;1.0 FUNCTIONAL_SNP rs4459999 chr4 123241047 Intron 7 125545 CEU:0.929;0.863 LEAD_SNP rs4505848 chr4 123132492 Intron 6 ASSOCIATION 19430480 Type 1 diabetes 12.3010299957 KIAA1109 FUNCTIONAL_SNP rs7699742 chr4 123264485 Intron 6 131993 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13147049 chr4 123193870 Intron 6 61378 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs7671357 chr4 123126450 Intron 6 6042 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs7664452 chr4 123146225 Intron 6 13733 CEU:1.0;0.87, CHB:1.0;0.814, JPT:1.0;0.951, YRI:1.0;1.0 FUNCTIONAL_SNP rs4145717 chr4 123316076 Intron 7 183584 CEU:1.0;1.0, CHB:1.0;0.866, JPT:0.948;0.857, YRI:1.0;1.0 LEAD_SNP rs6534347 chr4 123198435 Intron 6 ASSOCIATION 17554300 Type 1 diabetes 5.69897000434 KIAA1109 LEAD_SNP rs13119723 chr4 123218313 Intron 7 ASSOCIATION 20453842 Rheumatoid arthritis 6.15490195999 KIAA1109 LEAD_SNP rs17388568 chr4 123329362 Intron 7 ASSOCIATION 21297633 Ulcerative colitis 6.04575749056 ADAD1 ASSOCIATION 17554300 Type 1 diabetes 5.52287874528 ADAD1 FUNCTIONAL_SNP rs6848834 chr4 123509713 Intergenic 4 180351 CEU:0.949;0.818, CHB:1.0;0.846, JPT:1.0;1.0 FUNCTIONAL_SNP rs7676741 chr4 123523441 Intergenic 5b 194079 CEU:0.907;0.822, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs2069772 chr4 123373133 Intron 6 43771 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs35914000 chr4 123355923 Intergenic 6 26561 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3136534 chr4 123369776 Intergenic 6 40414 CEU:1.0;0.875 FUNCTIONAL_SNP rs1398554 chr4 123522569 Intergenic 6 193207 CEU:1.0;0.872, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs7699742 chr4 123264485 Intron 6 64877 CEU:1.0;0.875 FUNCTIONAL_SNP rs11098659 chr4 123396028 Intergenic 6 66666 CEU:1.0;0.875 FUNCTIONAL_SNP rs11722421 chr4 123271668 Intron 6 57694 CEU:1.0;0.875 FUNCTIONAL_SNP rs13147049 chr4 123193870 Intron 6 135492 CEU:1.0;0.875 FUNCTIONAL_SNP rs4505848 chr4 123132492 Intron 6 196870 CEU:1.0;0.875 FUNCTIONAL_SNP rs6814458 chr4 123520842 Intergenic 6 191480 CEU:0.951;0.863, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs11725823 chr4 123425785 Intergenic 6 96423 CEU:1.0;0.875 FUNCTIONAL_SNP rs9992580 chr4 123526195 Intergenic 7 196833 CEU:0.954;0.869, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs1904522 chr4 123336918 Intron 7 7556 CEU:1.0;0.875 FUNCTIONAL_SNP rs6829845 chr4 123510766 Intergenic 7 181404 CEU:0.953;0.83, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs12499753 chr4 123333177 Intron 7 3815 CEU:1.0;0.875 FUNCTIONAL_SNP rs11098666 chr4 123507914 Intergenic 7 178552 CEU:0.951;0.826, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs7693745 chr4 123235583 Intron 7 93779 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs4145717 chr4 123316076 Intron 7 13286 CEU:1.0;0.875 FUNCTIONAL_SNP rs716501 chr4 123351925 Intergenic 7 22563 CEU:1.0;0.875 LEAD_SNP rs6852535 chr4 123478716 Intergenic 7 ASSOCIATION 21685912 Progressive supranuclear palsy 7.0 IL2 - IL21 FUNCTIONAL_SNP rs4833829 chr4 123422341 Intergenic 4 56375 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17005931 chr4 123545648 Intron 4 66932 CEU:1.0;0.95, JPT:0.799;0.539 FUNCTIONAL_SNP rs7675731 chr4 123345145 Intron 5a 133571 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17005895 chr4 123524452 Intergenic 5a 45736 CEU:1.0;0.95, JPT:0.86;0.561 FUNCTIONAL_SNP rs2069762 chr4 123377980 Intergenic 5b 100736 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs936607 chr4 123300942 Intron 5b 177774 CEU:0.949;0.901, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs17005728 chr4 123344695 Intron 5b 134021 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12508346 chr4 123510253 Intergenic 5b 31537 CEU:1.0;0.95, JPT:0.857;0.556 FUNCTIONAL_SNP rs1913190 chr4 123554829 Intron 5b 76113 CEU:1.0;0.95 FUNCTIONAL_SNP rs1512971 chr4 123525335 Intergenic 6 46619 CEU:1.0;0.95, JPT:0.86;0.561 FUNCTIONAL_SNP rs1398555 chr4 123518747 Intergenic 6 40031 CEU:1.0;1.0, JPT:1.0;0.65 FUNCTIONAL_SNP rs4833826 chr4 123353917 Intergenic 6 124799 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12504008 chr4 123506351 Intergenic 6 27635 CEU:1.0;1.0, JPT:1.0;0.65 FUNCTIONAL_SNP rs2086346 chr4 123333671 Intron 6 145045 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11943002 chr4 123510999 Intergenic 6 32283 CEU:1.0;0.95, JPT:0.86;0.561 FUNCTIONAL_SNP rs6818415 chr4 123438014 Intergenic 6 40702 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7690352 chr4 123395076 Intergenic 6 83640 CEU:1.0;0.935, CHB:1.0;0.932, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7670532 chr4 123487134 Intergenic 7 8418 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7681161 chr4 123501086 Intergenic 7 22370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10518403 chr4 123557286 Intron 7 78570 CEU:1.0;0.95 FUNCTIONAL_SNP rs6814233 chr4 123314132 Intron 7 164584 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11938330 chr4 123511074 Intergenic 7 32358 CEU:1.0;0.95, CHB:0.724;0.525, JPT:0.86;0.561 FUNCTIONAL_SNP rs17005786 chr4 123392271 Intergenic 7 86445 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4833835 chr4 123470986 Intergenic 7 7730 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4833832 chr4 123456627 Intergenic 7 22089 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11938218 chr4 123516787 Intergenic 7 38071 CEU:1.0;1.0, JPT:1.0;0.623 FUNCTIONAL_SNP rs2055979 chr4 123540741 Intron 7 62025 CEU:0.949;0.901 FUNCTIONAL_SNP rs4833836 chr4 123500669 Intergenic 7 21953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6837165 chr4 123476243 Intergenic 7 2473 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12512701 chr4 123516500 Intergenic 7 37784 CEU:1.0;0.94, JPT:0.836;0.568, YRI:1.0;0.66 FUNCTIONAL_SNP rs17005850 chr4 123497833 Intergenic 7 19117 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12508721 chr4 123544664 Intron 7 65948 CEU:1.0;0.95, JPT:0.794;0.504 FUNCTIONAL_SNP rs11947301 chr4 123510881 Intergenic 7 32165 CEU:1.0;0.945, JPT:0.843;0.523 FUNCTIONAL_SNP rs4337746 chr4 123513553 Intergenic 7 34837 CEU:1.0;1.0, JPT:1.0;0.65 FUNCTIONAL_SNP rs4492018 chr4 123514528 Intergenic 7 35812 CEU:1.0;1.0, JPT:1.0;0.65 FUNCTIONAL_SNP rs1479923 chr4 123370387 Intergenic 7 108329 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7658100 chr4 123337373 Intron 7 141343 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9790783 chr4 123439059 Intergenic 7 39657 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 LEAD_SNP rs6822844 chr4 123509421 Intergenic 7 ASSOCIATION 18311140 Celiac disease 12.5228787453 IL2 - IL21 ASSOCIATION 17558408 Celiac disease 14.0 IL2 - IL21 LEAD_SNP rs7682241 chr4 123523875 Intergenic 4 ASSOCIATION 20596022 Alopecia areata 7.39794000867 IL2 - IL21 FUNCTIONAL_SNP rs7682481 chr4 123524026 Intergenic 4 151 CEU:1.0;0.957, CHB:1.0;0.783, JPT:1.0;0.901 FUNCTIONAL_SNP rs10212828 chr4 123500111 Intergenic 5a 23764 CEU:1.0;0.864, JPT:0.778;0.534 FUNCTIONAL_SNP rs2390351 chr4 123556724 Intron 5b 32849 CEU:1.0;0.955, JPT:0.811;0.622 FUNCTIONAL_SNP rs7667439 chr4 123393811 Intergenic 5b 130064 CEU:0.954;0.834, JPT:0.797;0.511 FUNCTIONAL_SNP rs1383043 chr4 123342616 Intron 6 181259 CEU:0.954;0.834, JPT:0.797;0.511 FUNCTIONAL_SNP rs7656035 chr4 123520229 Intergenic 6 3646 CEU:1.0;0.956, CHB:1.0;0.808, JPT:1.0;0.849 FUNCTIONAL_SNP rs4267747 chr4 123483062 Intergenic 6 40813 CEU:1.0;0.878, JPT:0.797;0.511 FUNCTIONAL_SNP rs17391154 chr4 123556193 Intron 7 32318 CEU:1.0;1.0, CHB:0.926;0.633, JPT:0.944;0.845 FUNCTIONAL_SNP rs7673567 chr4 123405984 Intergenic 7 117891 CEU:0.954;0.834, JPT:0.797;0.511 FUNCTIONAL_SNP rs6849146 chr4 123326091 Intron 7 197784 CEU:0.954;0.834, JPT:0.797;0.511 FUNCTIONAL_SNP rs6827839 chr4 123339015 Intron 7 184860 CEU:0.953;0.832, JPT:0.849;0.539 LEAD_SNP rs1986655 chr4 125993502 Intergenic 5b ASSOCIATION 19414484 Serum bilirubin levels 5.69897000434 ANKRD50 - FAT4 LEAD_SNP rs1395241 chr4 126359456 Intron 5b ASSOCIATION 20351715 Bipolar disorder and major depressive disorder (combined) 5.09691001301 FAT4 FUNCTIONAL_SNP rs7677254 chr4 126353280 Intron 4 6176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.944;0.563 FUNCTIONAL_SNP rs1395233 chr4 126354307 Intron 5b 5149 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.944;0.563 FUNCTIONAL_SNP rs11098812 chr4 126348639 Intron 6 10817 CEU:1.0;1.0, CHB:1.0;0.673, JPT:1.0;0.935 FUNCTIONAL_SNP rs11931967 chr4 126343279 Intron 7 16177 CEU:1.0;1.0, CHB:1.0;0.569, JPT:1.0;0.884 FUNCTIONAL_SNP rs13141820 chr4 126352482 Intron 7 6974 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.935 LEAD_SNP rs12639834 chr4 126426695 Intergenic 7 ASSOCIATION 19734545 Cognitive performance 5.22184874962 FAT4 - INTU LEAD_SNP rs950063 chr4 126431919 Intergenic 5b ASSOCIATION 19247474 Smoking behavior 5.04575749056 FAT4 - INTU FUNCTIONAL_SNP rs1506352 chr4 126431057 Intergenic 6 862 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1320267 chr4 126933292 Intergenic 7 ASSOCIATION 17903303 Subclinical atherosclerosis traits (other) 5.15490195999 FAT4 - INTU FUNCTIONAL_SNP rs2390929 chr4 126931257 Intergenic 5a 2035 CEU:1.0;1.0, CHB:0.95;0.903, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9993268 chr4 126931994 Intergenic 5a 1298 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs9654206 chr4 126930208 Intergenic 6 3084 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10026567 chr4 126932102 Intergenic 6 1190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1024020 chr4 131137761 Intergenic 6 ASSOCIATION 20031603 RR interval (heart rate) 6.39794000867 CYCSP14 - RPL7AP28 LEAD_SNP rs1478091 chr4 131790501 Intergenic 7 ASSOCIATION 19010793 Multiple sclerosis (severity) 5.69897000434 CYCSP14 - RPL7AP28 LEAD_SNP rs10026364 chr4 135522740 Intergenic 7 ASSOCIATION 21347282 Coronary heart disease 5.39794000867 PABPC4L - RPS2P27 LEAD_SNP rs6813479 chr4 137660383 Intergenic 5a ASSOCIATION 20834067 Longevity 6.0 TERF1P3 - RPS23P2 LEAD_SNP rs2313132 chr4 138692250 Intergenic 7 ASSOCIATION 19165918 Systemic lupus erythematosus 5.09691001301 PCDH18 - SLC7A11 LEAD_SNP rs17050782 chr4 140423134 Intron 6 ASSOCIATION 19247474 Smoking behavior 5.09691001301 RAB33B - SETD7 LEAD_SNP rs1550057 chr4 142117424 Intron 7 ASSOCIATION 20585324 Conduct disorder (case status) 5.39794000867 RNF150 - ZNF330 FUNCTIONAL_SNP rs1435129 chr4 142129680 Intron 5b 12256 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs6846312 chr4 142125686 Intron 7 8262 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs6851044 chr4 142130107 Intron 7 12683 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 LEAD_SNP rs17007017 chr4 142142729 Intron 4 ASSOCIATION 20585324 Conduct disorder (case status) 5.15490195999 ZNF330 FUNCTIONAL_SNP rs3733484 chr4 142155518 Exon,non-coding 7 12789 CEU:1.0;0.905, CHB:1.0;0.901, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7684664 chr4 142150860 Intron 2b 8131 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs3756106 chr4 142151262 Intron 7 8533 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs1435134 chr4 142153343 Intron 7 10614 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 LEAD_SNP rs17007695 chr4 142709723 Intergenic 5b ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 6.04575749056 IL15 - INPP4B LEAD_SNP rs12504628 chr4 145436324 Intergenic 7 ASSOCIATION 20010834 Pulmonary function 12.2218487496 GYPA - KRT18P51 FUNCTIONAL_SNP rs12509311 chr4 145478662 Intergenic 3a 42338 CEU:1.0;1.0, CHB:0.925;0.75, JPT:1.0;1.0 FUNCTIONAL_SNP rs1980057 chr4 145485738 Intergenic 5b 49414 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.945 FUNCTIONAL_SNP rs13141641 chr4 145506456 Intergenic 5b 70132 CEU:0.956;0.915, CHB:1.0;0.884, JPT:0.872;0.643 FUNCTIONAL_SNP rs7655625 chr4 145485915 Intergenic 5b 49591 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.945 FUNCTIONAL_SNP rs6537292 chr4 145469968 Intergenic 5b 33644 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.946 FUNCTIONAL_SNP rs1512288 chr4 145491281 Intergenic 5b 54957 CEU:1.0;0.957, CHB:1.0;0.943, JPT:1.0;0.945 FUNCTIONAL_SNP rs6817273 chr4 145492003 Intergenic 5b 55679 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.945, YRI:1.0;0.865 FUNCTIONAL_SNP rs1512281 chr4 145434901 Intergenic 6 1423 CEU:1.0;0.921, CHB:1.0;0.723, JPT:1.0;0.795 FUNCTIONAL_SNP rs11100860 chr4 145479139 Intergenic 6 42815 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.945 FUNCTIONAL_SNP rs6537296 chr4 145487934 Intergenic 6 51610 CEU:1.0;1.0 FUNCTIONAL_SNP rs13148031 chr4 145460338 Intergenic 6 24014 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.947 FUNCTIONAL_SNP rs1828591 chr4 145480780 Intergenic 6 44456 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.945 FUNCTIONAL_SNP rs6830832 chr4 145465491 Intergenic 6 29167 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs12511230 chr4 145471245 Intergenic 6 34921 CEU:1.0;1.0 FUNCTIONAL_SNP rs6842889 chr4 145479880 Intergenic 7 43556 CEU:1.0;1.0, CHB:1.0;0.943, JPT:0.944;0.89 FUNCTIONAL_SNP rs2130339 chr4 145464885 Intergenic 7 28561 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs995758 chr4 145478201 Intergenic 7 41877 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.935 FUNCTIONAL_SNP rs720484 chr4 145462364 Intergenic 7 26040 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946 FUNCTIONAL_SNP rs11938745 chr4 145465768 Intergenic 7 29444 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs13118928 chr4 145486389 Intergenic 7 50065 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.945 FUNCTIONAL_SNP rs1489759 chr4 145474473 Intergenic 7 38149 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.945 FUNCTIONAL_SNP rs1489762 chr4 145454964 Intergenic 7 18640 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;0.866 FUNCTIONAL_SNP rs720485 chr4 145462588 Intergenic 7 26264 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs1032297 chr4 145434744 Intergenic 7 1580 CEU:0.957;0.915, CHB:1.0;0.942, JPT:1.0;0.943 FUNCTIONAL_SNP rs13147758 chr4 145460230 Intergenic 7 23906 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs7697189 chr4 145436894 Intergenic 7 570 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs6828540 chr4 145463231 Intergenic 7 26907 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945 LEAD_SNP rs13147758 chr4 145460230 Intergenic 7 ASSOCIATION 19300500 Pulmonary function measures 10.096910013 GYPA - KRT18P51 FUNCTIONAL_SNP rs1980057 chr4 145485738 Intergenic 5b 25508 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6537292 chr4 145469968 Intergenic 5b 9738 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11938745 chr4 145465768 Intergenic 7 5538 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs720485 chr4 145462588 Intergenic 7 2358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1828591 chr4 145480780 Intergenic 6 ASSOCIATION 19300482 Chronic obstructive pulmonary disease 7.0 GYPA - KRT18P51 FUNCTIONAL_SNP rs11100860 chr4 145479139 Intergenic 6 1641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6830832 chr4 145465491 Intergenic 6 15289 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:0.962;0.859 FUNCTIONAL_SNP rs2130339 chr4 145464885 Intergenic 7 15895 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:0.961;0.856 FUNCTIONAL_SNP rs1489759 chr4 145474473 Intergenic 7 6307 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 LEAD_SNP rs1980057 chr4 145485738 Intergenic 5b ASSOCIATION 20010835 Pulmonary function 19.5228787453 GYPA - KRT18P51 FUNCTIONAL_SNP rs12509311 chr4 145478662 Intergenic 3a 7076 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13141641 chr4 145506456 Intergenic 5b 20718 CEU:0.956;0.913, CHB:1.0;0.939, JPT:0.874;0.681 FUNCTIONAL_SNP rs7655625 chr4 145485915 Intergenic 5b 177 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6537292 chr4 145469968 Intergenic 5b 15770 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1512288 chr4 145491281 Intergenic 5b 5543 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6817273 chr4 145492003 Intergenic 5b 6265 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1512281 chr4 145434901 Intergenic 6 50837 CEU:1.0;0.919, CHB:0.924;0.663, JPT:1.0;0.792 FUNCTIONAL_SNP rs11100860 chr4 145479139 Intergenic 6 6599 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6537296 chr4 145487934 Intergenic 6 2196 CEU:1.0;1.0 FUNCTIONAL_SNP rs13148031 chr4 145460338 Intergenic 6 25400 CEU:1.0;1.0, CHB:0.944;0.891, JPT:1.0;1.0 FUNCTIONAL_SNP rs1828591 chr4 145480780 Intergenic 6 4958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6830832 chr4 145465491 Intergenic 6 20247 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs12511230 chr4 145471245 Intergenic 6 14493 CEU:1.0;1.0 FUNCTIONAL_SNP rs6842889 chr4 145479880 Intergenic 7 5858 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs2130339 chr4 145464885 Intergenic 7 20853 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs995758 chr4 145478201 Intergenic 7 7537 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933 FUNCTIONAL_SNP rs720484 chr4 145462364 Intergenic 7 23374 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs12504628 chr4 145436324 Intergenic 7 49414 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.945 FUNCTIONAL_SNP rs11938745 chr4 145465768 Intergenic 7 19970 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13118928 chr4 145486389 Intergenic 7 651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1489759 chr4 145474473 Intergenic 7 11265 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1489762 chr4 145454964 Intergenic 7 30774 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs720485 chr4 145462588 Intergenic 7 23150 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1032297 chr4 145434744 Intergenic 7 50994 CEU:0.956;0.914, CHB:1.0;0.94, JPT:0.94;0.883 FUNCTIONAL_SNP rs13147758 chr4 145460230 Intergenic 7 25508 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7697189 chr4 145436894 Intergenic 7 48844 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.939 FUNCTIONAL_SNP rs6828540 chr4 145463231 Intergenic 7 22507 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 LEAD_SNP rs13118928 chr4 145486389 Intergenic 7 ASSOCIATION 20173748 Chronic obstructive pulmonary disease 6.30102999566 GYPA - KRT18P51 FUNCTIONAL_SNP rs12509311 chr4 145478662 Intergenic 3a 7727 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0 FUNCTIONAL_SNP rs1980057 chr4 145485738 Intergenic 5b 651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13141641 chr4 145506456 Intergenic 5b 20067 CEU:0.956;0.913, CHB:1.0;0.939, JPT:0.874;0.681 FUNCTIONAL_SNP rs7655625 chr4 145485915 Intergenic 5b 474 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6537292 chr4 145469968 Intergenic 5b 16421 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1512288 chr4 145491281 Intergenic 5b 4892 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6817273 chr4 145492003 Intergenic 5b 5614 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12511230 chr4 145471245 Intergenic 6 15144 CEU:1.0;1.0 FUNCTIONAL_SNP rs1512281 chr4 145434901 Intergenic 6 51488 CEU:1.0;0.919, CHB:0.924;0.663, JPT:1.0;0.792 FUNCTIONAL_SNP rs11100860 chr4 145479139 Intergenic 6 7250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6537296 chr4 145487934 Intergenic 6 1545 CEU:1.0;1.0 FUNCTIONAL_SNP rs13148031 chr4 145460338 Intergenic 6 26051 CEU:1.0;1.0, CHB:0.944;0.891, JPT:1.0;1.0, YRI:1.0;0.647 FUNCTIONAL_SNP rs1828591 chr4 145480780 Intergenic 6 5609 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6830832 chr4 145465491 Intergenic 6 20898 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs6842889 chr4 145479880 Intergenic 7 6509 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs2130339 chr4 145464885 Intergenic 7 21504 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs995758 chr4 145478201 Intergenic 7 8188 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;1.0 FUNCTIONAL_SNP rs720484 chr4 145462364 Intergenic 7 24025 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs12504628 chr4 145436324 Intergenic 7 50065 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.945 FUNCTIONAL_SNP rs11938745 chr4 145465768 Intergenic 7 20621 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0 FUNCTIONAL_SNP rs1489759 chr4 145474473 Intergenic 7 11916 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1489762 chr4 145454964 Intergenic 7 31425 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs720485 chr4 145462588 Intergenic 7 23801 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0 FUNCTIONAL_SNP rs1032297 chr4 145434744 Intergenic 7 51645 CEU:0.956;0.914, CHB:1.0;0.94, JPT:0.94;0.883 FUNCTIONAL_SNP rs13147758 chr4 145460230 Intergenic 7 26159 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs7697189 chr4 145436894 Intergenic 7 49495 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.939 FUNCTIONAL_SNP rs6828540 chr4 145463231 Intergenic 7 23158 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 LEAD_SNP rs1812175 chr4 145574844 Intron 7 ASSOCIATION 20397748 Height 9.0 HHIP ASSOCIATION 19343178 Height 5.39794000867 HHIP ASSOCIATION 18391951 Height 11.0 HHIP FUNCTIONAL_SNP rs7689420 chr4 145568352 Intron 4 6492 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7680661 chr4 145565116 Intron 5b 9728 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 LEAD_SNP rs6854783 chr4 145643079 Intron 7 ASSOCIATION 18391952 Height 8.69897000434 HHIP FUNCTIONAL_SNP rs6855202 chr4 145643326 Intron 5b 247 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.86 FUNCTIONAL_SNP rs923782 chr4 145648032 Intron 6 4953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs923783 chr4 145640985 Intron 6 2094 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.86 LEAD_SNP rs1492820 chr4 145650021 Intron 6 ASSOCIATION 18391950 Height 11.0 HHIP FUNCTIONAL_SNP rs2353915 chr4 145649242 Intron 6 779 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.807 FUNCTIONAL_SNP rs11100865 chr4 145651147 Intron 7 1126 CEU:1.0;0.854, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 LEAD_SNP rs1395821 chr4 148047550 Intergenic 6 ASSOCIATION 21378988 Coronary heart disease 6.15490195999 TTC29 - RPL31P26 FUNCTIONAL_SNP rs6821314 chr4 148046247 Intergenic 4 1303 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1395820 chr4 148032488 Intergenic 5a 15062 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.928 FUNCTIONAL_SNP rs4835377 chr4 148039045 Intergenic 5a 8505 CEU:1.0;0.842, CHB:1.0;1.0, JPT:1.0;0.948 FUNCTIONAL_SNP rs2357595 chr4 148033351 Intergenic 6 14199 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.96 FUNCTIONAL_SNP rs4835378 chr4 148040980 Intergenic 7 6570 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs7684913 chr4 148036416 Intergenic 7 11134 CEU:1.0;0.893, CHB:1.0;0.893, JPT:1.0;0.948, YRI:0.955;0.838 LEAD_SNP rs6845865 chr4 148974602 Intron 4 ASSOCIATION 20031603 QT interval 6.15490195999 ARHGAP10 LEAD_SNP rs1490453 chr4 149321346 Intron 5a ASSOCIATION 19260141 Biochemical measures 5.52287874528 NR3C2 LEAD_SNP rs2358462 chr4 149570680 Intergenic 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.39794000867 ASS1P8 - ATP5LP4 FUNCTIONAL_SNP rs17582962 chr4 149606100 Intergenic 4 35420 CEU:1.0;0.882, CHB:1.0;0.806, JPT:1.0;0.946 FUNCTIONAL_SNP rs10452224 chr4 149570069 Intergenic 5a 611 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17582815 chr4 149565400 Intergenic 6 5280 CEU:1.0;0.809, CHB:1.0;1.0, JPT:1.0;0.844, YRI:1.0;0.849 LEAD_SNP rs360929 chr4 152907700 Intergenic 7 ASSOCIATION 17903297 Volumetric brain MRI 5.04575749056 PET112L - FBXW7 LEAD_SNP rs11099864 chr4 153893354 Intron 7 ASSOCIATION 17362836 Amyotrophic lateral sclerosis 5.04575749056 FHDC1 FUNCTIONAL_SNP rs10020165 chr4 153892856 Intron 5b 498 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.906, YRI:1.0;0.907 LEAD_SNP rs12644284 chr4 154154000 Intron 4 ASSOCIATION 21654844 Multiple sclerosis 5.39794000867 TRIM2 LEAD_SNP rs17030434 chr4 154703596 Intron 4 ASSOCIATION 19389651 Electrocardiographic conduction measures 5.30102999566 SFRP2 FUNCTIONAL_SNP rs11099905 chr4 154686183 Intergenic 4 17413 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs1456391 chr4 154720485 Intergenic 5b 16889 CEU:1.0;1.0, CHB:1.0;0.901, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs12645134 chr4 154713430 Intergenic 5b 9834 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.866 FUNCTIONAL_SNP rs10014299 chr4 154700858 Intergenic 5b 2738 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs12639885 chr4 154700374 Intergenic 6 3222 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs952211 chr4 154717816 Intergenic 7 14220 CEU:1.0;1.0, CHB:1.0;0.901, JPT:1.0;1.0, YRI:1.0;0.867 LEAD_SNP rs1800789 chr4 155482743 Intergenic 7 ASSOCIATION 20031576 Fibrinogen 29.6989700043 FGB FUNCTIONAL_SNP rs6056 chr4 155488821 Coding 7 6078 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4681 chr4 155490832 Coding 4 8089 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4220 chr4 155491759 Coding 6 9016 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4333166 chr4 155481511 Intergenic 2a 1232 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4508864 chr4 155481289 Intergenic 4 1454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1800790 chr4 155483708 Intergenic 6 965 CEU:1.0;0.939 FUNCTIONAL_SNP rs2227401 chr4 155486381 Intron 7 3638 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2227424 chr4 155492720 Intergenic 7 9977 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2227426 chr4 155493171 Intergenic 7 10428 CEU:0.936;0.877, CHB:1.0;1.0, JPT:1.0;0.779 FUNCTIONAL_SNP rs2059502 chr4 155493319 Intergenic 7 10576 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2059503 chr4 155493419 Intergenic 7 10676 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs6056 chr4 155488821 Coding 7 ASSOCIATION 20031577 Fibrinogen 38.096910013 FGB FUNCTIONAL_SNP rs4681 chr4 155490832 Coding 4 2011 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4220 chr4 155491759 Coding 6 2938 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4333166 chr4 155481511 Intergenic 2a 7310 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4508864 chr4 155481289 Intergenic 4 7532 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1800790 chr4 155483708 Intergenic 6 5113 CEU:1.0;0.887 FUNCTIONAL_SNP rs2227401 chr4 155486381 Intron 7 2440 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1800789 chr4 155482743 Intergenic 7 6078 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2227424 chr4 155492720 Intergenic 7 3899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2227426 chr4 155493171 Intergenic 7 4350 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;0.904 FUNCTIONAL_SNP rs2059502 chr4 155493319 Intergenic 7 4498 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2059503 chr4 155493419 Intergenic 7 4598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs13109457 chr4 155514879 Intergenic 7 ASSOCIATION 21502573 D-dimer levels 17.5228787453 FGA - FGG FUNCTIONAL_SNP rs6050 chr4 155507590 Coding 4 7289 CEU:0.95;0.903, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13130318 chr4 155538470 Intergenic 6 23591 CEU:1.0;0.855, CHB:0.946;0.895, JPT:1.0;0.91 FUNCTIONAL_SNP rs6825454 chr4 155501188 Intron 6 13691 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7681423 chr4 155542248 Intergenic 7 27369 CEU:1.0;0.952, CHB:1.0;0.955, JPT:0.888;0.655 FUNCTIONAL_SNP rs7659024 chr4 155520930 Intergenic 7 6051 CEU:1.0;0.951, CHB:1.0;0.953, JPT:1.0;0.952 FUNCTIONAL_SNP rs2066861 chr4 155527436 Intron 7 12557 CEU:1.0;0.951, CHB:1.0;0.953, JPT:1.0;0.952 FUNCTIONAL_SNP rs2066864 chr4 155525695 Intron 7 10816 CEU:1.0;0.952, CHB:1.0;0.954, JPT:0.949;0.859 FUNCTIONAL_SNP rs2066865 chr4 155525276 Intergenic 7 10397 CEU:1.0;0.951, CHB:1.0;0.953, JPT:1.0;0.952 FUNCTIONAL_SNP rs7654093 chr4 155545072 Intergenic 7 30193 CEU:1.0;0.951, CHB:0.949;0.858, JPT:1.0;0.952 FUNCTIONAL_SNP rs12644950 chr4 155537321 Intergenic 7 22442 CEU:1.0;0.95, CHB:1.0;0.954, JPT:1.0;0.908 LEAD_SNP rs727153 chr4 155654421 Intergenic 7 ASSOCIATION 18823527 Alzheimer's disease 5.52287874528 FGG - LRAT FUNCTIONAL_SNP rs10014507 chr4 155654941 Intergenic 7 520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4234898 chr4 156998541 Intergenic 6 ASSOCIATION 19786962 Speech perception in dyslexia 7.30102999566 FTHL21 - PDGFC FUNCTIONAL_SNP rs11936835 chr4 156999042 Intergenic 6 501 CEU:1.0;0.845, CHB:1.0;0.888, JPT:1.0;0.548, YRI:1.0;0.657 FUNCTIONAL_SNP rs7683995 chr4 156996233 Intergenic 7 2308 CEU:1.0;1.0, CHB:1.0;0.642 LEAD_SNP rs8396 chr4 159630817 Exon,non-coding 7 ASSOCIATION 20037589 Serum metabolites 23.3979400087 PPID FUNCTIONAL_SNP rs2070630 chr4 159644494 Exon,non-coding 4 13677 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.805, YRI:0.867;0.643 FUNCTIONAL_SNP rs17843966 chr4 159629814 Exon,non-coding 7 1003 CEU:1.0;0.873, CHB:1.0;1.0, JPT:1.0;0.805 FUNCTIONAL_SNP rs12505475 chr4 159635244 Intron 7 4427 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.805 FUNCTIONAL_SNP rs4690909 chr4 159629151 Intron 7 1666 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs11737481 chr4 159621250 Intron 7 9567 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;1.0 LEAD_SNP rs17291045 chr4 161506897 Intron 7 ASSOCIATION 20041166 HIV-1 control 7.30102999566 RAPGEF2 - RPS14P7 FUNCTIONAL_SNP rs17355669 chr4 161472909 Intron 5b 33988 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs17356815 chr4 161491135 Intron 6 15762 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs17039895 chr4 161556489 Intergenic 6 49592 CEU:1.0;0.923 FUNCTIONAL_SNP rs17039903 chr4 161563081 Intergenic 6 56184 CEU:1.0;0.918 FUNCTIONAL_SNP rs17356843 chr4 161491336 Intron 6 15561 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs17357485 chr4 161517114 Intergenic 6 10217 CEU:1.0;1.0 FUNCTIONAL_SNP rs17293375 chr4 161579539 Intergenic 6 72642 CEU:1.0;1.0 FUNCTIONAL_SNP rs17292999 chr4 161577148 Intergenic 6 70251 CEU:1.0;1.0 FUNCTIONAL_SNP rs17292745 chr4 161565795 Intergenic 6 58898 CEU:1.0;1.0 FUNCTIONAL_SNP rs4691687 chr4 161574692 Intergenic 6 67795 CEU:1.0;1.0 FUNCTIONAL_SNP rs17290731 chr4 161487300 Intron 6 19597 CEU:1.0;0.913, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs4691692 chr4 161579007 Intergenic 6 72110 CEU:1.0;1.0 FUNCTIONAL_SNP rs17290759 chr4 161488402 Intron 7 18495 CEU:1.0;0.918, CHB:0.816;0.563, JPT:1.0;0.74 FUNCTIONAL_SNP rs17356398 chr4 161482723 Intron 7 24174 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs17291749 chr4 161521885 Intergenic 7 14988 CEU:1.0;1.0 FUNCTIONAL_SNP rs4691688 chr4 161575163 Intergenic 7 68266 CEU:1.0;1.0 FUNCTIONAL_SNP rs4691693 chr4 161579385 Intergenic 7 72488 CEU:1.0;1.0 FUNCTIONAL_SNP rs17039982 chr4 161579841 Intergenic 7 72944 CEU:1.0;0.912 FUNCTIONAL_SNP rs17358077 chr4 161536981 Intergenic 7 30084 CEU:1.0;1.0 LEAD_SNP rs4470583 chr4 162250932 Intergenic 6 ASSOCIATION 21310492 Diabetic retinopathy 6.39794000867 RPS14P7 - FSTL5 LEAD_SNP rs17638464 chr4 162602209 Intron 5b ASSOCIATION 20966902 Height 5.69897000434 FSTL5 LEAD_SNP rs6840361 chr4 163738121 Intergenic 7 ASSOCIATION 19896111 Hair morphology 5.39794000867 FSTL5 - NAF1 FUNCTIONAL_SNP rs2012358 chr4 163795102 Intergenic 6 56981 CEU:1.0;0.848, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10027421 chr4 163731790 Intergenic 6 6331 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;1.0, YRI:0.937;0.668 LEAD_SNP rs3792615 chr4 164532801 Intron 7 ASSOCIATION 21490949 Type 2 diabetes 5.04575749056 MARCH1 FUNCTIONAL_SNP rs3792613 chr4 164532998 Intron 3a 197 CEU:1.0;1.0, CHB:1.0;0.896, JPT:1.0;0.812, YRI:1.0;0.913 FUNCTIONAL_SNP rs3792614 chr4 164532973 Intron 4 172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.873, YRI:1.0;0.914 LEAD_SNP rs2710833 chr4 169409958 Intergenic 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (AST) 6.22184874962 DDX60L - PALLD FUNCTIONAL_SNP rs2243724 chr4 169408390 Intergenic 4 1568 CEU:1.0;0.868, CHB:1.0;0.658, JPT:1.0;0.699, YRI:1.0;0.79 LEAD_SNP rs17054392 chr4 169530258 Intron 5a ASSOCIATION 18521091 Response to iloperidone treatment (QT prolongation) 5.52287874528 PALLD LEAD_SNP rs6852435 chr4 175300779 Intergenic 7 ASSOCIATION 21177773 Response to acetaminophen (hepatotoxicity) 5.22184874962 KIAA1712 - HPGD FUNCTIONAL_SNP rs7665426 chr4 175325686 Intergenic 5b 24907 CEU:0.912;0.831, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.783 FUNCTIONAL_SNP rs6553786 chr4 175300604 Intergenic 5b 175 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6553785 chr4 175300338 Intergenic 6 441 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11732586 chr4 175312649 Intergenic 6 11870 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7655606 chr4 175312226 Intergenic 7 11447 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6553789 chr4 175318281 Intergenic 7 17502 CEU:1.0;0.913, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6553790 chr4 175318523 Intergenic 7 17744 CEU:1.0;0.912, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13108930 chr4 175321142 Intergenic 7 20363 CEU:1.0;0.913, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7687921 chr4 176859026 Intron 6 ASSOCIATION 20400778 Mortality among heart failure patients 5.39794000867 GPM6A LEAD_SNP rs1395479 chr4 178318191 Intergenic 6 ASSOCIATION 17903306 Heart rate variability traits 5.15490195999 NEIL3 - AGA LEAD_SNP rs17067123 chr4 180048362 Intergenic 7 ASSOCIATION 19684573 Response to hepatitis C treatment 5.09691001301 RPL19P8 - MGC45800 FUNCTIONAL_SNP rs1451416 chr4 180047408 Intergenic 5a 954 CEU:1.0;0.899, CHB:1.0;0.685, JPT:1.0;0.819 FUNCTIONAL_SNP rs17067113 chr4 180046510 Intergenic 5a 1852 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs17067105 chr4 180041329 Intergenic 6 7033 CEU:1.0;0.89, CHB:1.0;0.677, JPT:1.0;0.819 FUNCTIONAL_SNP rs11735415 chr4 180049244 Intergenic 6 882 CEU:1.0;0.899, CHB:1.0;0.7, JPT:1.0;0.819 FUNCTIONAL_SNP rs6857122 chr4 180062550 Intergenic 7 14188 CEU:0.898;0.806, JPT:0.868;0.637 FUNCTIONAL_SNP rs12644289 chr4 180040844 Intergenic 7 7518 CEU:1.0;0.899, CHB:1.0;0.7, JPT:1.0;0.819 FUNCTIONAL_SNP rs12647621 chr4 180041203 Intergenic 7 7159 CEU:1.0;0.899, CHB:1.0;0.7, JPT:1.0;0.819 FUNCTIONAL_SNP rs17067100 chr4 180040368 Intergenic 7 7994 CEU:1.0;0.899, CHB:1.0;0.661, JPT:1.0;0.8 LEAD_SNP rs2383393 chr4 180664653 Intergenic 6 ASSOCIATION 19851299 Body mass index 5.69897000434 RPL19P8 - MGC45800 FUNCTIONAL_SNP rs2168909 chr4 180660964 Intergenic 6 3689 CEU:1.0;1.0, CHB:1.0;0.842, JPT:1.0;1.0, YRI:1.0;0.837 FUNCTIONAL_SNP rs2383394 chr4 180662749 Intergenic 7 1904 CEU:1.0;1.0, CHB:1.0;0.842, JPT:1.0;1.0, YRI:1.0;0.837 FUNCTIONAL_SNP rs10050025 chr4 180663940 Intergenic 7 713 CEU:1.0;1.0, CHB:1.0;0.832, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs12501969 chr4 180658479 Intergenic 7 6174 CEU:1.0;1.0, CHB:1.0;0.842, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7672826 chr4 182399695 Intergenic 5b ASSOCIATION 19010793 Multiple sclerosis 5.09691001301 RPL19P8 - MGC45800 LEAD_SNP rs13148903 chr4 187257576 Intergenic 6 ASSOCIATION 20339536 Response to statin therapy 5.52287874528 SLC25A5P6 - MTNR1A FUNCTIONAL_SNP rs7349633 chr4 187247089 Intergenic 7 10487 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;0.73 FUNCTIONAL_SNP rs13150348 chr4 187258118 Intergenic 7 542 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13143852 chr4 187257332 Intergenic 7 244 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6552974 chr4 187257078 Intergenic 7 498 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7689330 chr4 187255631 Intergenic 7 1945 CEU:1.0;0.949, CHB:1.0;0.847, JPT:1.0;1.0 FUNCTIONAL_SNP rs13149934 chr4 187257955 Intergenic 7 379 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.841 FUNCTIONAL_SNP rs13150040 chr4 187257780 Intergenic 7 204 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs925642 chr4 187678866 Intergenic 5b ASSOCIATION 21552555 Obesity 5.15490195999 FAT1 - MRPS36P2 FUNCTIONAL_SNP rs7694786 chr4 187679340 Intergenic 5b 474 CEU:0.956;0.84, CHB:1.0;0.538, JPT:1.0;0.503 FUNCTIONAL_SNP rs11729956 chr4 187672156 Intergenic 6 6710 CEU:0.914;0.801, CHB:1.0;0.512 FUNCTIONAL_SNP rs11727497 chr4 187669842 Intergenic 7 9024 CEU:0.916;0.839, CHB:1.0;0.538 LEAD_SNP rs1431005 chr4 188345368 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 6.69897000434 MRPS36P2 - ZFP42 FUNCTIONAL_SNP rs7676864 chr4 188321485 Intergenic 5a 23883 CEU:1.0;0.956, CHB:0.946;0.812, JPT:1.0;0.952 FUNCTIONAL_SNP rs978629 chr4 188347395 Intergenic 5b 2027 CEU:1.0;1.0, CHB:1.0;0.953, JPT:0.941;0.694 FUNCTIONAL_SNP rs9684748 chr4 188319224 Intergenic 6 26144 CEU:1.0;0.955, CHB:0.944;0.768, JPT:1.0;0.95 FUNCTIONAL_SNP rs4623072 chr4 188380318 Intergenic 7 34950 CEU:1.0;1.0, CHB:1.0;0.906, JPT:0.941;0.694 FUNCTIONAL_SNP rs998344 chr4 188334489 Intergenic 7 10879 CEU:1.0;0.956, CHB:0.946;0.812, JPT:1.0;0.952 FUNCTIONAL_SNP rs12651176 chr4 188360878 Intergenic 7 15510 CEU:0.942;0.84, CHB:1.0;0.711, JPT:0.851;0.6 FUNCTIONAL_SNP rs6553064 chr4 188344661 Intergenic 7 707 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.7 LEAD_SNP rs7659062 chr4 189587079 Intergenic 5b ASSOCIATION 20125193 Cognitive test performance 5.09691001301 RPL7AP27 - HSP90AA4P FUNCTIONAL_SNP rs7662358 chr4 189590859 Intergenic 7 3780 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;1.0 LEAD_SNP rs12188164 chr5 428236 Intron 5b ASSOCIATION 21602797 Cystic fibrosis severity 5.39794000867 AHRR LEAD_SNP rs4957048 chr5 583442 Intergenic 5b ASSOCIATION 20228799 Ulcerative colitis 9.0 SLC9A3 - CEP72 FUNCTIONAL_SNP rs4957057 chr5 569230 Intergenic 5b 14212 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs6555357 chr5 560923 Intergenic 5b 22519 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs11960159 chr5 568685 Intergenic 5b 14757 CEU:1.0;0.903, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs3915384 chr5 573395 Intergenic 5b 10047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs11955068 chr5 582324 Intergenic 5b 1118 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 LEAD_SNP rs11739663 chr5 594083 Intergenic 7 ASSOCIATION 21297633 Ulcerative colitis 7.52287874528 SLC9A3 - CEP72 FUNCTIONAL_SNP rs6887972 chr5 597274 Intergenic 7 3191 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs10053310 chr5 595661 Intergenic 7 1578 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10474792 chr5 600058 Intergenic 7 5975 CEU:1.0;1.0, JPT:1.0;0.649, YRI:0.962;0.891 LEAD_SNP rs4580814 chr5 1113244 Intergenic 4 ASSOCIATION 20139978 Hematological and biochemical traits 9.30102999566 SLC12A7 LEAD_SNP rs2736100 chr5 1286516 Intron 5b ASSOCIATION 21725308 Lung cancer 27.0 TERT ASSOCIATION 21531791 Glioma 14.0 TERT ASSOCIATION 20871597 Lung adenocarcinoma 10.5228787453 TERT ASSOCIATION 20700438 Lung adenocarcinoma 21.6989700043 TERT ASSOCIATION 20543847 Testicular germ cell cancer 14.096910013 TERT ASSOCIATION 20139978 Hematological and biochemical traits 7.52287874528 TERT ASSOCIATION 19836008 Lung adenocarcinoma 9.69897000434 TERT ASSOCIATION 19578367 Glioma 16.6989700043 TERT ASSOCIATION 18835860 Idiopathic pulmonary fibrosis 7.52287874528 TERT LEAD_SNP rs2853676 chr5 1288547 Intron 5b ASSOCIATION 19578367 Glioma 13.3979400087 TERT LEAD_SNP rs4635969 chr5 1308552 Intergenic 6 ASSOCIATION 20543847 Testicular germ cell cancer 23.0 TERT - CLPTM1L LEAD_SNP rs4975616 chr5 1315660 Intergenic 5b ASSOCIATION 19654303 Lung cancer 8.52287874528 TERT - CLPTM1L FUNCTIONAL_SNP rs31490 chr5 1344458 Intron 4 28798 CEU:0.919;0.844, CHB:1.0;0.928, JPT:1.0;1.0 FUNCTIONAL_SNP rs467095 chr5 1336221 Intron 4 20561 CEU:0.958;0.88, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs401681 chr5 1322087 Intron 5b 6427 CEU:0.959;0.883, CHB:0.91;0.527 FUNCTIONAL_SNP rs421284 chr5 1325590 Intron 5b 9930 CEU:0.959;0.883, CHB:1.0;0.928, JPT:1.0;0.904 FUNCTIONAL_SNP rs452384 chr5 1330840 Intron 5b 15180 CEU:0.959;0.883, CHB:1.0;0.928, JPT:1.0;1.0 FUNCTIONAL_SNP rs466502 chr5 1325767 Intron 5b 10107 CEU:0.96;0.921, CHB:1.0;0.928, JPT:1.0;0.904 FUNCTIONAL_SNP rs465498 chr5 1325803 Intron 5b 10143 CEU:0.959;0.883, CHB:1.0;0.928, JPT:1.0;0.904 FUNCTIONAL_SNP rs421629 chr5 1320136 Intron 5b 4476 CEU:0.957;0.88, CHB:1.0;0.856, JPT:0.893;0.797, YRI:1.0;0.947 FUNCTIONAL_SNP rs380286 chr5 1320247 Intron 5b 4587 CEU:0.957;0.878, CHB:0.906;0.648, JPT:1.0;0.603, YRI:1.0;0.574 FUNCTIONAL_SNP rs4975615 chr5 1315343 Intergenic 5b 317 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs31484 chr5 1337906 Intron 6 22246 CEU:0.959;0.883, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.846 FUNCTIONAL_SNP rs452932 chr5 1330253 Intron 7 14593 CEU:0.959;0.883, CHB:1.0;0.928, JPT:1.0;1.0 LEAD_SNP rs402710 chr5 1320722 Intron 5b ASSOCIATION 18978790 Lung cancer 5.39794000867 CLPTM1L LEAD_SNP rs401681 chr5 1322087 Intron 5b ASSOCIATION 21160077 Serum prostate-specific antigen levels 10.0 CLPTM1L ASSOCIATION 20972438 Bladder cancer 6.30102999566 CLPTM1L ASSOCIATION 20101243 Pancreatic cancer 6.15490195999 CLPTM1L ASSOCIATION 18978787 Lung cancer 8.09691001301 CLPTM1L FUNCTIONAL_SNP rs31490 chr5 1344458 Intron 4 22371 CEU:1.0;0.961, CHB:1.0;0.59, YRI:1.0;0.859 FUNCTIONAL_SNP rs37006 chr5 1355058 Intergenic 4 32971 CEU:0.918;0.809, CHB:1.0;0.59, YRI:0.872;0.63 FUNCTIONAL_SNP rs467095 chr5 1336221 Intron 4 14134 CEU:1.0;1.0, CHB:1.0;0.59 FUNCTIONAL_SNP rs4975616 chr5 1315660 Intergenic 5b 6427 CEU:0.959;0.883, CHB:0.91;0.527 FUNCTIONAL_SNP rs37005 chr5 1356450 Intergenic 5b 34363 CEU:0.916;0.806, CHB:1.0;0.59, YRI:0.873;0.653 FUNCTIONAL_SNP rs452384 chr5 1330840 Intron 5b 8753 CEU:1.0;1.0, CHB:1.0;0.59, YRI:1.0;1.0 FUNCTIONAL_SNP rs421284 chr5 1325590 Intron 5b 3503 CEU:1.0;1.0, CHB:1.0;0.59, YRI:1.0;1.0 FUNCTIONAL_SNP rs466502 chr5 1325767 Intron 5b 3680 CEU:1.0;0.961, CHB:1.0;0.59, YRI:1.0;1.0 FUNCTIONAL_SNP rs465498 chr5 1325803 Intron 5b 3716 CEU:1.0;1.0, CHB:1.0;0.59, YRI:1.0;0.926 FUNCTIONAL_SNP rs414965 chr5 1324121 Intron 5b 2034 CEU:1.0;0.886, CHB:1.0;0.59, YRI:0.956;0.702 FUNCTIONAL_SNP rs421629 chr5 1320136 Intron 5b 1951 CEU:1.0;1.0, CHB:1.0;0.541 FUNCTIONAL_SNP rs380286 chr5 1320247 Intron 5b 1840 CEU:1.0;1.0, YRI:1.0;0.788 FUNCTIONAL_SNP rs31484 chr5 1337906 Intron 6 15819 CEU:1.0;1.0, CHB:1.0;0.59 FUNCTIONAL_SNP rs31489 chr5 1342714 Intron 7 20627 CEU:1.0;0.85, CHB:1.0;0.59, YRI:1.0;0.741 FUNCTIONAL_SNP rs452932 chr5 1330253 Intron 7 8166 CEU:1.0;1.0, CHB:1.0;0.59, YRI:1.0;1.0 LEAD_SNP rs31489 chr5 1342714 Intron 7 ASSOCIATION 19836008 Lung adenocarcinoma 9.69897000434 CLPTM1L FUNCTIONAL_SNP rs31490 chr5 1344458 Intron 4 1744 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.794 FUNCTIONAL_SNP rs37006 chr5 1355058 Intergenic 4 12344 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.8;0.573 FUNCTIONAL_SNP rs37011 chr5 1348798 Intergenic 4 6084 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.884;0.727 FUNCTIONAL_SNP rs467095 chr5 1336221 Intron 4 6493 CEU:1.0;0.846, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs37005 chr5 1356450 Intergenic 5b 13736 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.796, YRI:0.834;0.599 FUNCTIONAL_SNP rs37008 chr5 1351538 Intergenic 5b 8824 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;0.888, YRI:0.8;0.573 FUNCTIONAL_SNP rs401681 chr5 1322087 Intron 5b 20627 CEU:1.0;0.85, CHB:1.0;0.59, YRI:1.0;0.741 FUNCTIONAL_SNP rs421284 chr5 1325590 Intron 5b 17124 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;0.741 FUNCTIONAL_SNP rs27069 chr5 1347128 Intergenic 5b 4414 CEU:0.956;0.809, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.884;0.727 FUNCTIONAL_SNP rs27070 chr5 1346303 Intergenic 5b 3589 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs452384 chr5 1330840 Intron 5b 11874 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.741 FUNCTIONAL_SNP rs466502 chr5 1325767 Intron 5b 16947 CEU:0.956;0.809, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;0.741 FUNCTIONAL_SNP rs465498 chr5 1325803 Intron 5b 16911 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;0.8 FUNCTIONAL_SNP rs414965 chr5 1324121 Intron 5b 18593 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs421629 chr5 1320136 Intron 5b 22578 CEU:1.0;0.846, CHB:1.0;0.924, JPT:0.893;0.797 FUNCTIONAL_SNP rs380286 chr5 1320247 Intron 5b 22467 CEU:1.0;0.844, CHB:0.909;0.703, JPT:1.0;0.603, YRI:1.0;0.584 FUNCTIONAL_SNP rs4975615 chr5 1315343 Intergenic 5b 27371 CEU:0.917;0.841, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs31484 chr5 1337906 Intron 6 4808 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs452932 chr5 1330253 Intron 7 12461 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.741 LEAD_SNP rs12653946 chr5 1895829 Intron 5b ASSOCIATION 20676098 Prostate cancer 17.3979400087 IRX4 - IRX2 LEAD_SNP rs6879627 chr5 2109901 Intergenic 5b ASSOCIATION 20686608 Pancreatic cancer 5.09691001301 IRX4 - IRX2 LEAD_SNP rs17586674 chr5 2335581 Intergenic 5b ASSOCIATION 20125193 Cognitive test performance 5.30102999566 IRX4 - IRX2 FUNCTIONAL_SNP rs13168356 chr5 2337312 Intergenic 5b 1731 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs2131658 chr5 2337972 Intergenic 5b 2391 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs1545899 chr5 2336643 Intergenic 5b 1062 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs13169238 chr5 2337228 Intergenic 5b 1647 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs2170925 chr5 2337839 Intergenic 5b 2258 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs13182644 chr5 2337339 Intergenic 5b 1758 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs4635935 chr5 2338263 Intergenic 6 2682 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs4607354 chr5 2338204 Intergenic 7 2623 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.947, YRI:1.0;0.959 FUNCTIONAL_SNP rs4443423 chr5 2338397 Intergenic 7 2816 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.96 LEAD_SNP rs492478 chr5 3939476 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 5.39794000867 IRX1 - ADAMTS16 LEAD_SNP rs11748327 chr5 4029789 Intergenic 6 ASSOCIATION 21107343 Myocardial infarction 12.3010299957 IRX1 - ADAMTS16 FUNCTIONAL_SNP rs11750208 chr5 4031987 Intergenic 6 2198 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;1.0 LEAD_SNP rs7727102 chr5 4720585 Intron 6 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.0 IRX1 - ADAMTS16 LEAD_SNP rs32566 chr5 5792507 Intergenic 7 ASSOCIATION 17903295 Morbidity-free survival 8.69897000434 KIAA0947 - FLJ33360 FUNCTIONAL_SNP rs2560463 chr5 5783653 Intergenic 6 8854 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.943;0.843 LEAD_SNP rs7728043 chr5 5897694 Intergenic 7 ASSOCIATION 20031603 QT interval 6.0 KIAA0947 - FLJ33360 FUNCTIONAL_SNP rs1174930 chr5 5891878 Intergenic 5b 5816 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7729583 chr5 5892684 Intergenic 6 5010 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4273574 chr5 5893809 Intergenic 7 3885 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7709608 chr5 5899213 Intergenic 7 1519 CEU:1.0;1.0, CHB:1.0;0.783, JPT:1.0;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs11746117 chr5 5897213 Intergenic 7 481 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 LEAD_SNP rs11134178 chr5 6834167 Intergenic 6 ASSOCIATION 18821564 Attention deficit hyperactivity disorder 5.52287874528 PAPD7 - ADCY2 LEAD_SNP rs7729273 chr5 7228047 Intergenic 6 ASSOCIATION 19734545 Cognitive performance 6.0 PAPD7 - ADCY2 FUNCTIONAL_SNP rs11740932 chr5 7204935 Intergenic 7 23112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13175341 chr5 7193456 Intergenic 7 34591 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13189413 chr5 7213606 Intergenic 7 14441 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12515060 chr5 7191601 Intergenic 7 36446 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6880887 chr5 7229253 Intergenic 7 1206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7702187 chr5 9332281 Intron 7 ASSOCIATION 16252231 Parkinson's disease 5.09691001301 SEMA5A LEAD_SNP rs10513025 chr5 9623622 Exon,non-coding 4 ASSOCIATION 19812673 Autism 6.52287874528 SNORD123 - TAS2R1 LEAD_SNP rs1092913 chr5 10467702 Intron 4 ASSOCIATION 21424380 Breast cancer 5.69897000434 ROPN1L - RPL30P7 FUNCTIONAL_SNP rs1875018 chr5 10451417 Intron 2b 16285 CEU:1.0;0.89, JPT:0.945;0.847 FUNCTIONAL_SNP rs1103930 chr5 10467466 Intron 4 236 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7720556 chr5 10449219 Intron 4 18483 CEU:1.0;0.89, CHB:0.906;0.534, JPT:0.945;0.847 FUNCTIONAL_SNP rs2921162 chr5 10456693 Intron 4 11009 CEU:1.0;1.0, CHB:1.0;0.601, JPT:1.0;0.901 FUNCTIONAL_SNP rs2673903 chr5 10453701 Intron 4 14001 CEU:1.0;1.0, JPT:0.946;0.895 FUNCTIONAL_SNP rs11745100 chr5 10453133 Intron 4 14569 CEU:1.0;0.89, JPT:0.945;0.847 FUNCTIONAL_SNP rs2589665 chr5 10460981 Intron 4 6721 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0 FUNCTIONAL_SNP rs2435992 chr5 10475548 Intergenic 5a 7846 CEU:1.0;1.0 FUNCTIONAL_SNP rs2278354 chr5 10448978 Intron 5a 18724 CEU:1.0;0.865, JPT:0.888;0.748 FUNCTIONAL_SNP rs2088626 chr5 10459555 Intron 5b 8147 CEU:1.0;0.801, CHB:1.0;0.555, JPT:0.867;0.583 FUNCTIONAL_SNP rs1875017 chr5 10451154 Intron 5b 16548 CEU:1.0;0.89, JPT:0.945;0.847 FUNCTIONAL_SNP rs12520289 chr5 10467257 Intron 5b 445 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2567573 chr5 10463797 Intron 5b 3905 CEU:1.0;1.0, CHB:1.0;0.919, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs814597 chr5 10468929 Intron 6 1227 CEU:1.0;1.0, CHB:1.0;0.93, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs2011318 chr5 10446124 Intron 6 21578 CEU:1.0;0.879, CHB:0.851;0.724, JPT:0.888;0.748 FUNCTIONAL_SNP rs2673855 chr5 10460216 Intron 6 7486 CEU:1.0;1.0, CHB:1.0;0.717, JPT:1.0;0.815 FUNCTIONAL_SNP rs2967951 chr5 10464107 Intron 6 3595 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2012362 chr5 10450427 Intron 7 17275 CEU:1.0;0.89, JPT:0.945;0.847 FUNCTIONAL_SNP rs2921161 chr5 10443851 Intron 7 23851 CEU:1.0;0.879 FUNCTIONAL_SNP rs2673894 chr5 10464049 Intron 7 3653 CEU:1.0;1.0, CHB:1.0;0.927, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2648810 chr5 10466073 Intron 7 1629 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.879 FUNCTIONAL_SNP rs1814855 chr5 10459751 Intron 7 7951 CEU:1.0;0.879, CHB:1.0;0.636, JPT:1.0;0.775 LEAD_SNP rs267939 chr5 10752315 Intron 5b ASSOCIATION 21297633 Ulcerative colitis 11.2218487496 DAP FUNCTIONAL_SNP rs3776414 chr5 10689562 Intron 4 62753 CEU:1.0;0.884, YRI:1.0;0.674 FUNCTIONAL_SNP rs2930047 chr5 10695526 Intron 4 56789 CEU:1.0;0.884, YRI:1.0;0.954 FUNCTIONAL_SNP rs900535 chr5 10706152 Intron 5b 46163 CEU:1.0;1.0, YRI:0.94;0.528 FUNCTIONAL_SNP rs267963 chr5 10736580 Intron 5b 15735 CEU:1.0;0.841, CHB:1.0;0.845, JPT:1.0;0.729, YRI:1.0;0.697 FUNCTIONAL_SNP rs267973 chr5 10726281 Intron 5b 26034 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs267975 chr5 10723004 Intron 5b 29311 CEU:1.0;0.849, CHB:0.815;0.562, JPT:0.796;0.576, YRI:0.947;0.684 FUNCTIONAL_SNP rs5745271 chr5 10690749 Intron 5b 61566 CEU:1.0;0.875, YRI:1.0;0.944 FUNCTIONAL_SNP rs2918398 chr5 10693896 Intron 5b 58419 CEU:0.957;0.843 FUNCTIONAL_SNP rs2930048 chr5 10698569 Intron 6 53746 CEU:1.0;0.871 FUNCTIONAL_SNP rs7733385 chr5 10712199 Intron 6 40116 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs267951 chr5 10743420 Intron 6 8895 CEU:1.0;0.849, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.75;0.536 FUNCTIONAL_SNP rs267978 chr5 10719804 Intron 6 32511 CEU:1.0;1.0, CHB:1.0;0.731, JPT:1.0;0.767, YRI:1.0;0.674 FUNCTIONAL_SNP rs267985 chr5 10713395 Intron 6 38920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.715 FUNCTIONAL_SNP rs9312742 chr5 10734772 Intron 6 17543 CEU:1.0;1.0, CHB:1.0;0.731, JPT:1.0;0.767, YRI:0.945;0.626 FUNCTIONAL_SNP rs4702722 chr5 10677339 Intergenic 7 74976 CEU:1.0;0.816, YRI:1.0;0.911 FUNCTIONAL_SNP rs2930059 chr5 10753399 Intron 7 1084 CEU:0.956;0.808 FUNCTIONAL_SNP rs267941 chr5 10750542 Intron 7 1773 CEU:1.0;0.842, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs267945 chr5 10747689 Intron 7 4626 CEU:1.0;0.849, CHB:1.0;0.846, JPT:1.0;0.767, YRI:1.0;0.672 FUNCTIONAL_SNP rs6870539 chr5 10742747 Intron 7 9568 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs267972 chr5 10727639 Intron 7 24676 CEU:1.0;1.0, CHB:0.819;0.67, YRI:0.947;0.684 FUNCTIONAL_SNP rs267982 chr5 10715677 Intron 7 36638 CEU:1.0;0.848, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.715 FUNCTIONAL_SNP rs267984 chr5 10714364 Intron 7 37951 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;1.0, YRI:0.946;0.682 FUNCTIONAL_SNP rs12332143 chr5 10759514 Intron 7 7199 CEU:1.0;0.881 FUNCTIONAL_SNP rs5745264 chr5 10691118 Intron 7 61197 CEU:1.0;0.884, YRI:1.0;0.637 FUNCTIONAL_SNP rs2918392 chr5 10704797 Intron 7 47518 CEU:1.0;0.96, YRI:1.0;0.598 LEAD_SNP rs6885224 chr5 11169945 Intron 7 ASSOCIATION 21095009 Myopia (pathological) 5.09691001301 CTNND2 FUNCTIONAL_SNP rs6860246 chr5 11168742 Intron 6 1203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 LEAD_SNP rs2896103 chr5 13764419 Intron 6 ASSOCIATION 17903303 Subclinical atherosclerosis traits (other) 5.30102999566 DNAH5 FUNCTIONAL_SNP rs6554812 chr5 13762972 Coding 7 1447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs9688229 chr5 13760943 Intron 7 3476 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.966 FUNCTIONAL_SNP rs6554813 chr5 13763039 Intron 7 1380 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10039621 chr5 13772457 Intron 7 8038 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;0.893 FUNCTIONAL_SNP rs6860236 chr5 13762013 Intron 7 2406 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs1502041 chr5 13758529 Intron 7 5890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1502050 chr5 13779743 Intron 7 15324 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs7715811 chr5 13769974 Intron 7 5555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 LEAD_SNP rs7715811 chr5 13769974 Intron 7 ASSOCIATION 17903303 Subclinical atherosclerosis traits (other) 5.22184874962 DNAH5 FUNCTIONAL_SNP rs6554812 chr5 13762972 Coding 7 7002 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs2896103 chr5 13764419 Intron 6 5555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs9688229 chr5 13760943 Intron 7 9031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6554813 chr5 13763039 Intron 7 6935 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs10039621 chr5 13772457 Intron 7 2483 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:0.961;0.89 FUNCTIONAL_SNP rs6860236 chr5 13762013 Intron 7 7961 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.919 FUNCTIONAL_SNP rs1502041 chr5 13758529 Intron 7 11445 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.922 FUNCTIONAL_SNP rs1502050 chr5 13779743 Intron 7 9769 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1502050 chr5 13779743 Intron 7 ASSOCIATION 17903303 Subclinical atherosclerosis traits (other) 5.04575749056 DNAH5 FUNCTIONAL_SNP rs6554812 chr5 13762972 Coding 7 16771 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs2896103 chr5 13764419 Intron 6 15324 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs9688229 chr5 13760943 Intron 7 18800 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6554813 chr5 13763039 Intron 7 16704 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs10039621 chr5 13772457 Intron 7 7286 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:0.961;0.89 FUNCTIONAL_SNP rs6860236 chr5 13762013 Intron 7 17730 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.919 FUNCTIONAL_SNP rs1502041 chr5 13758529 Intron 7 21214 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.922 FUNCTIONAL_SNP rs7715811 chr5 13769974 Intron 7 9769 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs682748 chr5 17148911 Intron 6 ASSOCIATION 19668339 Hippocampal atrophy 5.09691001301 RPS26P28 - BASP1 LEAD_SNP rs349475 chr5 19440168 Intergenic 6 ASSOCIATION 20800221 Depression--quantitative trait 5.69897000434 HSPD1P15 - CDH18 FUNCTIONAL_SNP rs10520861 chr5 19441735 Intergenic 7 1567 CEU:0.948;0.814, CHB:0.886;0.708, JPT:0.944;0.805 LEAD_SNP rs4701252 chr5 21779154 Intron 6 ASSOCIATION 19557197 Waist circumference 5.69897000434 CDH12 FUNCTIONAL_SNP rs4701455 chr5 21742462 Intron 7 36692 CEU:1.0;1.0, CHB:1.0;0.811, JPT:1.0;0.927, YRI:1.0;1.0 LEAD_SNP rs2047267 chr5 25087725 Intergenic 6 ASSOCIATION 21294900 Serum uric acid 5.39794000867 CDH10 - MSNL1 LEAD_SNP rs7727656 chr5 25760679 Intergenic 7 ASSOCIATION 19668339 Hippocampal atrophy 5.09691001301 CDH10 - MSNL1 FUNCTIONAL_SNP rs4701502 chr5 25765275 Intergenic 6 4596 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs11747427 chr5 25743274 Intergenic 6 17405 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.922 FUNCTIONAL_SNP rs11959954 chr5 25759159 Intergenic 7 1520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs2009803 chr5 25750878 Intergenic 7 9801 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs1552007 chr5 25756762 Intergenic 7 3917 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4701498 chr5 25755625 Intergenic 7 5054 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs2331845 chr5 25757457 Intergenic 7 3222 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs1904459 chr5 25756491 Intergenic 7 4188 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs7711949 chr5 25748329 Intergenic 7 12350 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs10942137 chr5 25753645 Intergenic 7 7034 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs1351292 chr5 25747869 Intergenic 7 12810 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.824 LEAD_SNP rs10038113 chr5 25902342 Intergenic 7 ASSOCIATION 19456320 Autism 5.52287874528 CDH10 - MSNL1 LEAD_SNP rs4307059 chr5 25967703 Intergenic 5b ASSOCIATION 19404256 Autism 9.69897000434 MSNL1 - CDH9 LEAD_SNP rs4479806 chr5 26723783 Intron 6 ASSOCIATION 21079607 Anorexia nervosa 5.09691001301 MSNL1 - CDH9 LEAD_SNP rs2548003 chr5 28747323 Intergenic 6 ASSOCIATION 17903296 Hip geometry 6.69897000434 CDH9 - PGBD3P2 FUNCTIONAL_SNP rs1862560 chr5 28733909 Intergenic 6 13414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1423287 chr5 28762202 Intergenic 6 14879 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0, YRI:1.0;0.905 FUNCTIONAL_SNP rs1345787 chr5 28754303 Intergenic 6 6980 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs1862559 chr5 28733753 Intergenic 7 13570 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.967 FUNCTIONAL_SNP rs967079 chr5 28755993 Intergenic 7 8670 CEU:1.0;1.0, CHB:0.938;0.88, JPT:1.0;1.0, YRI:1.0;0.905 FUNCTIONAL_SNP rs2250921 chr5 28766482 Intergenic 7 19159 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.831 LEAD_SNP rs9292394 chr5 30661573 Intergenic 7 ASSOCIATION 20709820 Emphysema-related traits 5.69897000434 HPRTP2 - RPL19P11 FUNCTIONAL_SNP rs10042842 chr5 30661819 Intergenic 5b 246 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs10057522 chr5 30713684 Intergenic 5b 52111 CEU:0.93;0.81, JPT:1.0;1.0 FUNCTIONAL_SNP rs10057467 chr5 30713695 Intergenic 5b 52122 CEU:0.939;0.831, CHB:0.81;0.518, JPT:1.0;0.927 FUNCTIONAL_SNP rs1370182 chr5 30713080 Intergenic 7 51507 CEU:0.939;0.831, JPT:1.0;0.927 FUNCTIONAL_SNP rs4867281 chr5 30690618 Intergenic 7 29045 CEU:0.936;0.823, CHB:1.0;0.754, JPT:1.0;0.927, YRI:1.0;0.924 FUNCTIONAL_SNP rs10040305 chr5 30658147 Intergenic 7 3426 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 LEAD_SNP rs1173766 chr5 32804528 Intergenic 5b ASSOCIATION 21572416 Blood pressure 7.69897000434 C5orf23 - RPS8P8 ASSOCIATION 21572416 Blood pressure 7.0 C5orf23 - RPS8P8 LEAD_SNP rs10472828 chr5 32888818 Intergenic 5b ASSOCIATION 19570815 Height 6.52287874528 C5orf23 - RPS8P8 ASSOCIATION 19343178 Height 6.52287874528 C5orf23 - RPS8P8 FUNCTIONAL_SNP rs10472829 chr5 32889130 Intergenic 5a 312 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6450932 chr5 32886340 Intergenic 7 2478 CEU:1.0;1.0 LEAD_SNP rs6868223 chr5 33636594 Intron 7 ASSOCIATION 20400778 Mortality among heart failure patients 5.69897000434 ADAMTS12 FUNCTIONAL_SNP rs3935844 chr5 33639682 Intron 5a 3088 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.567 FUNCTIONAL_SNP rs6862337 chr5 33659825 Intron 5b 23231 CEU:1.0;0.959, CHB:0.939;0.79, JPT:1.0;0.77 FUNCTIONAL_SNP rs10052473 chr5 33654160 Intron 6 17566 CEU:1.0;0.96, CHB:0.935;0.778, JPT:1.0;0.853 FUNCTIONAL_SNP rs4263503 chr5 33638872 Intron 6 2278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4076944 chr5 33638224 Intron 7 1630 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.891;0.627 FUNCTIONAL_SNP rs4380665 chr5 33636326 Intron 7 268 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.807 LEAD_SNP rs16891982 chr5 33951693 Coding 5a ASSOCIATION 20585627 Eye color 12.0 SLC45A2 ASSOCIATION 20585627 Hair color 19.3979400087 SLC45A2 ASSOCIATION 20585627 Hair color 19.3979400087 SLC45A2 ASSOCIATION 17999355 Skin pigmentation 10.5228787453 SLC45A2 LEAD_SNP rs35391 chr5 33955673 Intron 7 ASSOCIATION 19340012 Tanning 9.52287874528 SLC45A2 LEAD_SNP rs28777 chr5 33958959 Intron 7 ASSOCIATION 18483556 Black vs. blond hair color 17.0 SLC45A2 ASSOCIATION 18483556 Black vs. red hair color 13.0457574906 SLC45A2 LEAD_SNP rs409045 chr5 34628627 Intergenic 7 ASSOCIATION 19454037 Left ventricular mass 6.09691001301 C1QTNF3 - RAI14 FUNCTIONAL_SNP rs382782 chr5 34626341 Intergenic 4 2286 CEU:1.0;0.961, CHB:1.0;0.897, JPT:1.0;0.915 FUNCTIONAL_SNP rs381126 chr5 34626256 Intergenic 4 2371 CEU:1.0;0.961, CHB:1.0;0.897, JPT:1.0;0.915 FUNCTIONAL_SNP rs437509 chr5 34638814 Intergenic 5a 10187 CEU:1.0;1.0, CHB:1.0;0.896, JPT:0.892;0.607 FUNCTIONAL_SNP rs377504 chr5 34628393 Intergenic 5a 234 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs437465 chr5 34638868 Intergenic 5a 10241 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.906;0.751, YRI:1.0;0.616 FUNCTIONAL_SNP rs440678 chr5 34629933 Intergenic 5a 1306 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;0.95 FUNCTIONAL_SNP rs399862 chr5 34627833 Intergenic 5a 794 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs467222 chr5 34631874 Intergenic 5b 3247 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs455613 chr5 34632666 Intergenic 5b 4039 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs367167 chr5 34633392 Intergenic 5b 4765 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.885, YRI:1.0;1.0 FUNCTIONAL_SNP rs416207 chr5 34633209 Intergenic 5b 4582 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs436961 chr5 34633171 Intergenic 5b 4544 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs408815 chr5 34633199 Intergenic 5b 4572 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs409601 chr5 34628854 Intergenic 6 227 CEU:1.0;1.0, CHB:1.0;0.904, JPT:0.905;0.75, YRI:1.0;0.569 FUNCTIONAL_SNP rs457361 chr5 34631678 Intergenic 6 3051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;0.867 FUNCTIONAL_SNP rs456108 chr5 34636990 Intergenic 6 8363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:0.89;0.552 FUNCTIONAL_SNP rs456329 chr5 34632601 Intergenic 7 3974 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs404765 chr5 34640138 Intergenic 7 11511 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.906;0.751, YRI:0.943;0.57 FUNCTIONAL_SNP rs460836 chr5 34634993 Intergenic 7 6366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.903, YRI:1.0;0.634 FUNCTIONAL_SNP rs372645 chr5 34627578 Intergenic 7 1049 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs406210 chr5 34634390 Intergenic 7 5763 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs372550 chr5 34638423 Intergenic 7 9796 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.906;0.751, YRI:0.94;0.578 FUNCTIONAL_SNP rs379727 chr5 34639110 Intergenic 7 10483 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.906;0.751, YRI:1.0;0.642 FUNCTIONAL_SNP rs466261 chr5 34633755 Intergenic 7 5128 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs461277 chr5 34633585 Intergenic 7 4958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.893, YRI:1.0;1.0 FUNCTIONAL_SNP rs458986 chr5 34633839 Intergenic 7 5212 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs457451 chr5 34631360 Intergenic 7 2733 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909, YRI:1.0;1.0 FUNCTIONAL_SNP rs458995 chr5 34633909 Intergenic 7 5282 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 LEAD_SNP rs37369 chr5 35037115 Coding 7 ASSOCIATION 21572414 Urinary metabolites 181.698970004 AGXT2 LEAD_SNP rs931555 chr5 35803577 Intron 5b ASSOCIATION 21244703 Multiple sclerosis 6.39794000867 SPEF2 LEAD_SNP rs6897932 chr5 35874575 Coding 7 ASSOCIATION 19525953 Multiple sclerosis 5.69897000434 IL7R ASSOCIATION 17660530 Multiple sclerosis 6.52287874528 IL7R ASSOCIATION 17554260 Type 1 diabetes 5.09691001301 IL7R FUNCTIONAL_SNP rs10214273 chr5 35883986 Intergenic 4 9411 CEU:0.94;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6871748 chr5 35885982 Intergenic 6 11407 CEU:0.94;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10214237 chr5 35883734 Intergenic 7 9159 CEU:0.94;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3194051 chr5 35876274 Coding 5b ASSOCIATION 21297633 Ulcerative colitis 7.39794000867 IL7R FUNCTIONAL_SNP rs700179 chr5 35879595 Exon,non-coding 6 3321 CEU:1.0;0.865, CHB:1.0;0.79, JPT:1.0;1.0 FUNCTIONAL_SNP rs10491434 chr5 35877914 Exon,non-coding 5b 1640 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.594 FUNCTIONAL_SNP rs1833907 chr5 35904614 Exon,non-coding 6 28340 CEU:1.0;0.881, CHB:0.734;0.539, JPT:1.0;1.0 FUNCTIONAL_SNP rs1053496 chr5 35879429 Exon,non-coding 5b 3155 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.594 FUNCTIONAL_SNP rs6871116 chr5 35924748 Intron 4 48474 CEU:1.0;0.844, JPT:1.0;1.0 FUNCTIONAL_SNP rs3866449 chr5 35919343 Intron 4 43069 CEU:0.945;0.806, CHB:0.734;0.539, JPT:1.0;1.0 FUNCTIONAL_SNP rs11950831 chr5 35922070 Intron 4 45796 CEU:1.0;0.844, JPT:1.0;1.0 FUNCTIONAL_SNP rs7725599 chr5 35821747 Intron 5b 54527 CEU:1.0;0.916 FUNCTIONAL_SNP rs4024110 chr5 35919651 Intron 5b 43377 CEU:1.0;0.844, CHB:0.734;0.539, JPT:1.0;1.0 FUNCTIONAL_SNP rs11567699 chr5 35859011 Intron 5b 17263 CEU:1.0;1.0, JPT:1.0;1.0, YRI:0.887;0.758 FUNCTIONAL_SNP rs11567701 chr5 35859863 Intron 5b 16411 CEU:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.836 FUNCTIONAL_SNP rs16902573 chr5 35907372 Intron 6 31098 CEU:1.0;0.854, JPT:1.0;1.0 FUNCTIONAL_SNP rs6893803 chr5 35831744 Intergenic 6 44530 CEU:1.0;0.849 FUNCTIONAL_SNP rs11567751 chr5 35871684 Intron 7 4590 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.719 FUNCTIONAL_SNP rs3822733 chr5 35875134 Intron 7 1140 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.719 FUNCTIONAL_SNP rs1494554 chr5 35873872 Intron 7 2402 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.923;0.792 FUNCTIONAL_SNP rs2287900 chr5 35903997 Intergenic 7 27723 CEU:1.0;0.881, CHB:0.734;0.539, JPT:1.0;1.0 FUNCTIONAL_SNP rs1494571 chr5 35880087 Intergenic 7 3813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.719 FUNCTIONAL_SNP rs6872631 chr5 35831936 Intergenic 7 44338 CEU:1.0;0.849 FUNCTIONAL_SNP rs9292614 chr5 35824121 Intron 7 52153 CEU:0.956;0.84 FUNCTIONAL_SNP rs10052964 chr5 35832221 Intergenic 7 44053 CEU:1.0;0.849 FUNCTIONAL_SNP rs987107 chr5 35875227 Intron 7 1047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs4263525 chr5 35825485 Intron 7 50789 CEU:0.956;0.84 FUNCTIONAL_SNP rs990716 chr5 35899264 Intergenic 7 22990 CEU:1.0;0.88, CHB:0.734;0.539, YRI:0.832;0.596 LEAD_SNP rs1445898 chr5 35910529 Coding 7 ASSOCIATION 17554260 Type 1 diabetes 5.09691001301 CAPSL FUNCTIONAL_SNP rs3866450 chr5 35919378 Intron 2b 8849 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1445899 chr5 35910419 Intron 6 110 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs860413 chr5 35943042 Intergenic 7 ASSOCIATION 21399635 Primary biliary cirrhosis 11.0 CAPSL - UGT3A1 FUNCTIONAL_SNP rs1993879 chr5 35952140 Exon,non-coding 5b 9098 CEU:1.0;1.0 FUNCTIONAL_SNP rs17313508 chr5 35953949 Exon,non-coding 6 10907 CEU:1.0;1.0 FUNCTIONAL_SNP rs700172 chr5 35934157 Intron 5b 8885 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.927, YRI:1.0;1.0 FUNCTIONAL_SNP rs696734 chr5 35928508 Intron 6 14534 CEU:1.0;1.0, CHB:0.931;0.867, JPT:1.0;0.927, YRI:1.0;1.0 FUNCTIONAL_SNP rs13172042 chr5 35947531 Intergenic 7 4489 CEU:1.0;0.946, YRI:1.0;0.763 LEAD_SNP rs267759 chr5 36137620 Intron 7 ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 5.15490195999 LMBRD2 LEAD_SNP rs270545 chr5 38051593 Intron 7 ASSOCIATION 20125088 Major depressive disorder 6.0 GDNF - EGFLAM FUNCTIONAL_SNP rs270594 chr5 38060688 Intron 3a 9095 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0 FUNCTIONAL_SNP rs270578 chr5 38078180 Intron 4 26587 CEU:1.0;0.918, CHB:1.0;0.885, JPT:0.931;0.764 FUNCTIONAL_SNP rs270543 chr5 38052046 Intron 5a 453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs270538 chr5 38053333 Intron 5b 1740 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs270596 chr5 38057728 Intron 6 6135 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2463765 chr5 38094717 Intron 6 43124 CEU:0.905;0.819 FUNCTIONAL_SNP rs2453338 chr5 38094871 Intron 6 43278 CEU:1.0;0.914 FUNCTIONAL_SNP rs169187 chr5 38056271 Intron 6 4678 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;0.583 FUNCTIONAL_SNP rs1703301 chr5 38058559 Intron 7 6966 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs270599 chr5 38055273 Intron 7 3680 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;0.948 FUNCTIONAL_SNP rs2471065 chr5 38095315 Intron 7 43722 CEU:1.0;0.911 FUNCTIONAL_SNP rs270537 chr5 38053488 Intron 7 1895 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1729011 chr5 38058518 Intron 7 6925 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0, YRI:1.0;0.95 LEAD_SNP rs11959928 chr5 39397132 Intron 5b ASSOCIATION 20383146 Chronic kidney disease 7.0 DAB2 FUNCTIONAL_SNP rs700233 chr5 39364554 Coding 5b 32578 CEU:1.0;0.853, YRI:0.865;0.564 FUNCTIONAL_SNP rs1421094 chr5 39355591 Intron 2a 41541 CEU:1.0;0.819 FUNCTIONAL_SNP rs1421095 chr5 39355648 Intron 4 41484 CEU:1.0;0.819 FUNCTIONAL_SNP rs700220 chr5 39356591 Intron 4 40541 CEU:1.0;0.819, YRI:0.865;0.564 FUNCTIONAL_SNP rs835214 chr5 39358557 Intron 5a 38575 CEU:1.0;0.888 FUNCTIONAL_SNP rs12153248 chr5 39400305 Intron 5a 3173 CEU:1.0;0.927, CHB:1.0;0.769, JPT:1.0;0.747, YRI:0.933;0.571 FUNCTIONAL_SNP rs835218 chr5 39359323 Intron 5b 37809 CEU:1.0;0.888 FUNCTIONAL_SNP rs835223 chr5 39381357 Intron 5b 15775 CEU:1.0;0.924, JPT:0.808;0.515, YRI:0.865;0.564 FUNCTIONAL_SNP rs700232 chr5 39364358 Intron 5b 32774 CEU:1.0;0.888 FUNCTIONAL_SNP rs700237 chr5 39368176 Intron 5b 28956 CEU:1.0;0.888, JPT:0.808;0.515, YRI:0.865;0.564 FUNCTIONAL_SNP rs700238 chr5 39369103 Intron 5b 28029 CEU:1.0;0.927, JPT:0.829;0.555 FUNCTIONAL_SNP rs11951093 chr5 39421736 Intron 5b 24604 CEU:1.0;0.856, JPT:0.906;0.648 FUNCTIONAL_SNP rs700221 chr5 39357175 Intron 6 39957 CEU:1.0;0.849 FUNCTIONAL_SNP rs700227 chr5 39361802 Intron 6 35330 CEU:1.0;0.888 FUNCTIONAL_SNP rs700229 chr5 39362039 Intron 6 35093 CEU:1.0;0.888, JPT:0.808;0.515, YRI:0.865;0.564 FUNCTIONAL_SNP rs700242 chr5 39384888 Intron 6 12244 CEU:1.0;0.924 FUNCTIONAL_SNP rs1362800 chr5 39378115 Intron 6 19017 CEU:1.0;0.924, JPT:0.808;0.515 LEAD_SNP rs2548145 chr5 40134777 Intergenic 7 ASSOCIATION 21529783 Alcoholism (alcohol use disorder factor score) 5.69897000434 DAB2 - PTGER4 LEAD_SNP rs4613763 chr5 40392728 Intergenic 7 ASSOCIATION 18587394 Crohn's disease 26.15490196 DAB2 - PTGER4 LEAD_SNP rs17234657 chr5 40401509 Intergenic 5b ASSOCIATION 17554300 Crohn's disease 11.6989700043 DAB2 - PTGER4 LEAD_SNP rs11742570 chr5 40410584 Intergenic 4 ASSOCIATION 21102463 Crohn's disease 35.15490196 DAB2 - PTGER4 FUNCTIONAL_SNP rs9292777 chr5 40437948 Intergenic 2b 27364 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.912;0.707 FUNCTIONAL_SNP rs6451493 chr5 40410935 Intergenic 4 351 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6451494 chr5 40411291 Intergenic 4 707 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1445001 chr5 40431664 Intergenic 5a 21080 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs10473191 chr5 40412944 Intergenic 5b 2360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1992660 chr5 40415067 Intergenic 5b 4483 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6871591 chr5 40406130 Intergenic 5b 4454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6879489 chr5 40425190 Intergenic 6 14606 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1445004 chr5 40414419 Intergenic 6 3835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7711427 chr5 40414886 Intergenic 6 4302 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6890268 chr5 40406050 Intergenic 6 4534 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12655810 chr5 40412195 Intergenic 6 1611 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1899983 chr5 40424977 Intergenic 6 14393 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.89 FUNCTIONAL_SNP rs6888952 chr5 40412466 Intergenic 6 1882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9292771 chr5 40434652 Intergenic 6 24068 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.911;0.794 FUNCTIONAL_SNP rs6878370 chr5 40433552 Intergenic 7 22968 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs6896969 chr5 40424426 Intergenic 7 13842 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1373692 chr5 40431183 Intergenic 7 20599 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 LEAD_SNP rs6451493 chr5 40410935 Intergenic 4 ASSOCIATION 21297633 Ulcerative colitis 8.52287874528 DAB2 - PTGER4 FUNCTIONAL_SNP rs9292777 chr5 40437948 Intergenic 2b 27013 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.912;0.707 FUNCTIONAL_SNP rs6451494 chr5 40411291 Intergenic 4 356 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11742570 chr5 40410584 Intergenic 4 351 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1445001 chr5 40431664 Intergenic 5a 20729 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs10473191 chr5 40412944 Intergenic 5b 2009 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1992660 chr5 40415067 Intergenic 5b 4132 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6871591 chr5 40406130 Intergenic 5b 4805 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6879489 chr5 40425190 Intergenic 6 14255 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1445004 chr5 40414419 Intergenic 6 3484 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7711427 chr5 40414886 Intergenic 6 3951 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6890268 chr5 40406050 Intergenic 6 4885 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12655810 chr5 40412195 Intergenic 6 1260 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1899983 chr5 40424977 Intergenic 6 14042 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.89 FUNCTIONAL_SNP rs6888952 chr5 40412466 Intergenic 6 1531 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9292771 chr5 40434652 Intergenic 6 23717 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.911;0.794 FUNCTIONAL_SNP rs6878370 chr5 40433552 Intergenic 7 22617 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs6896969 chr5 40424426 Intergenic 7 13491 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1373692 chr5 40431183 Intergenic 7 20248 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 LEAD_SNP rs1992660 chr5 40415067 Intergenic 5b ASSOCIATION 17684544 Crohn's disease 6.39794000867 DAB2 - PTGER4 FUNCTIONAL_SNP rs6451493 chr5 40410935 Intergenic 4 4132 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6451494 chr5 40411291 Intergenic 4 3776 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11742570 chr5 40410584 Intergenic 4 4483 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1445001 chr5 40431664 Intergenic 5a 16597 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs10473191 chr5 40412944 Intergenic 5b 2123 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6871591 chr5 40406130 Intergenic 5b 8937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6879489 chr5 40425190 Intergenic 6 10123 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1445004 chr5 40414419 Intergenic 6 648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6890268 chr5 40406050 Intergenic 6 9017 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12655810 chr5 40412195 Intergenic 6 2872 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7711427 chr5 40414886 Intergenic 6 181 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1899983 chr5 40424977 Intergenic 6 9910 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.897 FUNCTIONAL_SNP rs6888952 chr5 40412466 Intergenic 6 2601 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6896969 chr5 40424426 Intergenic 7 9359 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1373692 chr5 40431183 Intergenic 7 16116 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 LEAD_SNP rs6896969 chr5 40424426 Intergenic 7 ASSOCIATION 19525953 Multiple sclerosis 6.69897000434 DAB2 - PTGER4 FUNCTIONAL_SNP rs6451493 chr5 40410935 Intergenic 4 13491 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6451494 chr5 40411291 Intergenic 4 13135 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11742570 chr5 40410584 Intergenic 4 13842 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1445001 chr5 40431664 Intergenic 5a 7238 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs1992660 chr5 40415067 Intergenic 5b 9359 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10473191 chr5 40412944 Intergenic 5b 11482 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6871591 chr5 40406130 Intergenic 5b 18296 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6879489 chr5 40425190 Intergenic 6 764 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1445004 chr5 40414419 Intergenic 6 10007 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6890268 chr5 40406050 Intergenic 6 18376 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12655810 chr5 40412195 Intergenic 6 12231 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7711427 chr5 40414886 Intergenic 6 9540 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1899983 chr5 40424977 Intergenic 6 551 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.897 FUNCTIONAL_SNP rs6888952 chr5 40412466 Intergenic 6 11960 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1373692 chr5 40431183 Intergenic 7 6757 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 LEAD_SNP rs1373692 chr5 40431183 Intergenic 7 ASSOCIATION 17447842 Crohn's disease 11.6989700043 DAB2 - PTGER4 FUNCTIONAL_SNP rs9292777 chr5 40437948 Intergenic 2b 6765 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.886 FUNCTIONAL_SNP rs6451493 chr5 40410935 Intergenic 4 20248 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs6451494 chr5 40411291 Intergenic 4 19892 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs11742570 chr5 40410584 Intergenic 4 20599 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs1445001 chr5 40431664 Intergenic 5a 481 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10473191 chr5 40412944 Intergenic 5b 18239 CEU:0.958;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs1992660 chr5 40415067 Intergenic 5b 16116 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs6871591 chr5 40406130 Intergenic 5b 25053 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs6879489 chr5 40425190 Intergenic 6 5993 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.914;0.801 FUNCTIONAL_SNP rs1445004 chr5 40414419 Intergenic 6 16764 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs7711427 chr5 40414886 Intergenic 6 16297 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.881 FUNCTIONAL_SNP rs6890268 chr5 40406050 Intergenic 6 25133 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs12655810 chr5 40412195 Intergenic 6 18988 CEU:0.959;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 FUNCTIONAL_SNP rs6888952 chr5 40412466 Intergenic 6 18717 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.917;0.808 FUNCTIONAL_SNP rs9292771 chr5 40434652 Intergenic 6 3469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6878370 chr5 40433552 Intergenic 7 2369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6896969 chr5 40424426 Intergenic 7 6757 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.812 LEAD_SNP rs9292777 chr5 40437948 Intergenic 2b ASSOCIATION 17554261 Crohn's disease 17.5228787453 DAB2 - PTGER4 FUNCTIONAL_SNP rs1445001 chr5 40431664 Intergenic 5a 6284 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.886 FUNCTIONAL_SNP rs9292771 chr5 40434652 Intergenic 6 3296 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.876 FUNCTIONAL_SNP rs6878370 chr5 40433552 Intergenic 7 4396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.886 FUNCTIONAL_SNP rs1373692 chr5 40431183 Intergenic 7 6765 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.886 LEAD_SNP rs10440635 chr5 40490790 Intergenic 4 ASSOCIATION 21743469 Ankylosing spondylitis 6.52287874528 DAB2 - PTGER4 FUNCTIONAL_SNP rs7725052 chr5 40487270 Intergenic 2b 3520 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.536 FUNCTIONAL_SNP rs9283753 chr5 40490609 Intergenic 3a 181 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7720838 chr5 40486896 Intergenic 4 3894 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0 LEAD_SNP rs979233 chr5 42375243 Intergenic 7 ASSOCIATION 18204098 Systemic lupus erythematosus 5.39794000867 RPSAP38 - GHR FUNCTIONAL_SNP rs2972396 chr5 42407985 Intergenic 6 32742 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.921 FUNCTIONAL_SNP rs1858138 chr5 42395281 Intergenic 7 20038 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs1509460 chr5 42433819 Intron 7 58576 CEU:1.0;0.961, CHB:1.0;0.904, JPT:1.0;1.0, YRI:0.915;0.838 FUNCTIONAL_SNP rs2940923 chr5 42463775 Intron 7 88532 CEU:1.0;0.853, CHB:1.0;0.863, JPT:1.0;1.0, YRI:0.914;0.801 FUNCTIONAL_SNP rs2940927 chr5 42422389 Intergenic 7 47146 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.837 LEAD_SNP rs13188386 chr5 42473555 Intron 7 ASSOCIATION 19084217 Serum markers of iron status 5.09691001301 GHR LEAD_SNP rs4296809 chr5 44186668 Intergenic 7 ASSOCIATION 20171287 Brain structure 6.04575749056 RPL29P12 - FGF10 FUNCTIONAL_SNP rs12518724 chr5 44155102 Intergenic 7 31566 CEU:0.939;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.633 FUNCTIONAL_SNP rs4866878 chr5 44187929 Intergenic 7 1261 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 LEAD_SNP rs4415084 chr5 44662515 Intergenic 6 ASSOCIATION 21263130 Breast cancer 10.096910013 FGF10 - MRPS30 FUNCTIONAL_SNP rs4321755 chr5 44646195 Intergenic 2b 16320 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.765 FUNCTIONAL_SNP rs12522626 chr5 44685698 Intergenic 4 23183 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12515012 chr5 44694535 Intergenic 4 32020 CEU:1.0;1.0, CHB:1.0;0.656, JPT:1.0;0.682 FUNCTIONAL_SNP rs10941677 chr5 44662399 Intergenic 5b 116 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.744 FUNCTIONAL_SNP rs4419600 chr5 44678534 Intergenic 6 16019 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.769 FUNCTIONAL_SNP rs7735881 chr5 44650176 Intergenic 6 12339 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.741 FUNCTIONAL_SNP rs2218080 chr5 44714330 Intergenic 6 51815 CEU:0.959;0.92, CHB:0.952;0.864, JPT:1.0;0.909, YRI:0.911;0.681 FUNCTIONAL_SNP rs6861560 chr5 44708378 Intergenic 6 45863 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs16901937 chr5 44709141 Intergenic 6 46626 CEU:1.0;0.96, CHB:1.0;0.688, JPT:1.0;0.682 FUNCTIONAL_SNP rs2013513 chr5 44702306 Intergenic 6 39791 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs6874055 chr5 44666965 Intergenic 6 4450 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.769 FUNCTIONAL_SNP rs7723539 chr5 44660210 Intergenic 7 2305 CEU:1.0;1.0, CHB:1.0;0.716, JPT:1.0;0.682 FUNCTIONAL_SNP rs920329 chr5 44702507 Intergenic 7 39992 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs6451770 chr5 44691395 Intergenic 7 28880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12187196 chr5 44683819 Intergenic 7 21304 CEU:1.0;1.0, CHB:1.0;0.721, JPT:1.0;0.682 FUNCTIONAL_SNP rs4463188 chr5 44642670 Intergenic 7 19845 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.769 FUNCTIONAL_SNP rs2218081 chr5 44705140 Intergenic 7 42625 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs7720551 chr5 44664477 Intergenic 7 1962 CEU:1.0;1.0, CHB:1.0;0.721, JPT:1.0;0.682 FUNCTIONAL_SNP rs1438825 chr5 44706931 Intergenic 7 44416 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.954;0.717 FUNCTIONAL_SNP rs4415085 chr5 44662959 Intergenic 7 444 CEU:1.0;1.0, CHB:1.0;0.721, JPT:1.0;0.682 FUNCTIONAL_SNP rs1821936 chr5 44699482 Intron 7 36967 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs2165009 chr5 44697916 Intergenic 7 35401 CEU:1.0;1.0, CHB:1.0;0.688, JPT:1.0;0.682 FUNCTIONAL_SNP rs2165010 chr5 44706780 Intergenic 7 44265 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs920328 chr5 44699051 Intron 7 36536 CEU:1.0;0.921, CHB:1.0;0.688, JPT:1.0;0.682 FUNCTIONAL_SNP rs4492118 chr5 44646625 Intergenic 7 15890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.765 FUNCTIONAL_SNP rs4571480 chr5 44687188 Intergenic 7 24673 CEU:1.0;1.0, CHB:1.0;0.721, JPT:1.0;0.676 FUNCTIONAL_SNP rs4479849 chr5 44644006 Intergenic 7 18509 CEU:1.0;1.0, CHB:1.0;0.688, JPT:1.0;0.682 FUNCTIONAL_SNP rs13156930 chr5 44698035 Intergenic 7 35520 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs714130 chr5 44701418 Intergenic 7 38903 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs10805685 chr5 44661958 Intergenic 7 557 CEU:1.0;1.0, CHB:1.0;0.716, JPT:1.0;0.71 FUNCTIONAL_SNP rs10805686 chr5 44662128 Intergenic 7 387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs7716600 chr5 44875005 Intergenic 6 ASSOCIATION 20872241 Breast cancer 6.15490195999 MRPS30 - HCN1 FUNCTIONAL_SNP rs930395 chr5 44822458 Intergenic 5b 52547 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.856 LEAD_SNP rs10941694 chr5 45197779 Intergenic 6 ASSOCIATION 20686651 Chronic kidney disease and serum creatinine levels 5.04575749056 MRPS30 - HCN1 FUNCTIONAL_SNP rs12522822 chr5 45143465 Intergenic 6 54314 CEU:1.0;1.0, JPT:1.0;0.657 LEAD_SNP rs981782 chr5 45285718 Intron 6 ASSOCIATION 17529967 Breast cancer 5.04575749056 HCN1 LEAD_SNP rs4311394 chr5 53300662 Intron 5a ASSOCIATION 20011104 Adiponectin levels 7.52287874528 ARL15 FUNCTIONAL_SNP rs1541681 chr5 53304620 Intron 4 3958 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7718193 chr5 53291591 Intron 5a 9071 CEU:1.0;0.893, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.673 FUNCTIONAL_SNP rs12654393 chr5 53302620 Intron 5a 1958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4588541 chr5 53300640 Intron 5a 22 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3776705 chr5 53304955 Intron 5b 4293 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3776706 chr5 53304933 Intron 5b 4271 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6450175 chr5 53297824 Intron 5b 2838 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6876198 chr5 53303595 Intron 6 2933 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10805455 chr5 53302302 Intron 6 1640 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12521454 chr5 53297304 Intron 6 3358 CEU:1.0;0.935, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6450176 chr5 53298025 Intron 7 2637 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7736354 chr5 53297591 Intron 7 3071 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1541680 chr5 53304725 Intron 7 4063 CEU:1.0;1.0, YRI:1.0;0.747 FUNCTIONAL_SNP rs6886510 chr5 53303127 Intron 7 2465 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6898870 chr5 53293107 Intron 7 7555 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.702 FUNCTIONAL_SNP rs3776716 chr5 53298923 Intron 7 1739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3776717 chr5 53298762 Intron 7 1900 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3776720 chr5 53296158 Intron 7 4504 CEU:1.0;0.894, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12659966 chr5 53292892 Intron 7 7770 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.68 FUNCTIONAL_SNP rs2448 chr5 53302354 Intron 7 1692 CEU:1.0;0.894, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7735253 chr5 53297611 Intron 7 3051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1445887 chr5 53299376 Intron 7 1286 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs415407 chr5 55414956 Intron 6 ASSOCIATION 20595579 Longevity 8.39794000867 ANKRD55 FUNCTIONAL_SNP rs424561 chr5 55414509 Intron 7 447 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.911 LEAD_SNP rs6859219 chr5 55438580 Intron 2b ASSOCIATION 20453842 Rheumatoid arthritis 11.0 ANKRD55 FUNCTIONAL_SNP rs10065637 chr5 55438851 Intron 4 271 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1020388 chr5 55560027 Intergenic 6 ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 6.52287874528 RPL17P22 - RNU6ATAC2P LEAD_SNP rs6867983 chr5 55854153 Intron 7 ASSOCIATION 20864672 Triglycerides 5.52287874528 RPL26P19 - MAP3K1 FUNCTIONAL_SNP rs4301182 chr5 55857675 Intron 7 3522 CEU:1.0;0.906, CHB:1.0;0.659, JPT:1.0;1.0 LEAD_SNP rs16886165 chr5 56023083 Intergenic 5b ASSOCIATION 19330030 Breast cancer 6.30102999566 RPL26P19 - MAP3K1 FUNCTIONAL_SNP rs12653202 chr5 56016918 Intergenic 7 6165 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.804, YRI:1.0;1.0 LEAD_SNP rs889312 chr5 56031884 Intergenic 3a ASSOCIATION 20453838 Breast cancer 8.30102999566 RPL26P19 - MAP3K1 ASSOCIATION 17529967 Breast cancer 19.15490196 RPL26P19 - MAP3K1 FUNCTIONAL_SNP rs1862626 chr5 56032940 Intergenic 4 1056 CEU:1.0;1.0, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4700485 chr5 56034207 Intergenic 5b 2323 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.752 FUNCTIONAL_SNP rs961847 chr5 56041064 Intergenic 6 9180 CEU:1.0;0.956, CHB:1.0;0.95, JPT:1.0;0.953 FUNCTIONAL_SNP rs12697152 chr5 56025716 Intergenic 6 6168 CEU:1.0;0.957, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs1862625 chr5 56032719 Intergenic 6 835 CEU:1.0;1.0, CHB:1.0;0.956, JPT:1.0;1.0 FUNCTIONAL_SNP rs1910020 chr5 56026500 Intergenic 7 5384 CEU:1.0;1.0, CHB:1.0;0.956, JPT:1.0;1.0 LEAD_SNP rs1844437 chr5 57320954 Intergenic 6 ASSOCIATION 21190210 Hoarding 5.69897000434 ACTBL2 - PLK2 FUNCTIONAL_SNP rs11741819 chr5 57309999 Intergenic 3a 10955 CEU:0.928;0.804, CHB:1.0;0.771, JPT:1.0;1.0 FUNCTIONAL_SNP rs1352610 chr5 57321586 Intergenic 5a 632 CEU:1.0;1.0, CHB:1.0;0.813, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1454924 chr5 57334825 Intergenic 5b 13871 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1454925 chr5 57336494 Intergenic 5b 15540 CEU:1.0;1.0, CHB:0.924;0.747, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6886096 chr5 57307518 Intergenic 5b 13436 CEU:0.932;0.814, CHB:0.855;0.641, JPT:1.0;0.909 FUNCTIONAL_SNP rs11748228 chr5 57271454 Intergenic 6 49500 CEU:0.932;0.814, CHB:0.74;0.516, JPT:1.0;1.0 FUNCTIONAL_SNP rs17749982 chr5 57291155 Intergenic 6 29799 CEU:0.931;0.811, CHB:1.0;0.754, JPT:1.0;1.0 FUNCTIONAL_SNP rs1826106 chr5 57337744 Intergenic 6 16790 CEU:1.0;1.0, CHB:1.0;0.813, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs11740997 chr5 57309398 Intergenic 6 11556 CEU:0.932;0.814, CHB:1.0;0.764, JPT:1.0;1.0 FUNCTIONAL_SNP rs11741208 chr5 57306555 Intergenic 7 14399 CEU:0.932;0.814, CHB:1.0;0.773, JPT:1.0;1.0 FUNCTIONAL_SNP rs11749915 chr5 57309072 Intergenic 7 11882 CEU:0.931;0.811, CHB:1.0;0.754, JPT:1.0;1.0 FUNCTIONAL_SNP rs1352609 chr5 57321413 Intergenic 7 459 CEU:1.0;1.0, CHB:1.0;0.813, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1826101 chr5 57320208 Intergenic 7 746 CEU:1.0;1.0, CHB:1.0;0.82, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1349957 chr5 57272274 Intergenic 7 48680 CEU:0.932;0.814, CHB:0.861;0.655, JPT:1.0;0.92 FUNCTIONAL_SNP rs1378248 chr5 57286030 Intergenic 7 34924 CEU:0.931;0.811, CHB:1.0;0.754, JPT:1.0;1.0 FUNCTIONAL_SNP rs4700243 chr5 57338357 Intergenic 7 17403 CEU:1.0;1.0, CHB:1.0;0.813, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs984926 chr5 57320343 Intergenic 7 611 CEU:1.0;1.0, CHB:1.0;0.813, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11742445 chr5 57285867 Intergenic 7 35087 CEU:0.931;0.811, CHB:1.0;0.754, JPT:1.0;1.0 FUNCTIONAL_SNP rs1387641 chr5 57334047 Intergenic 7 13093 CEU:1.0;1.0, CHB:1.0;0.813, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10052657 chr5 58407771 Intron 7 ASSOCIATION 21642993 Esophageal cancer 18.6989700043 PDE4D LEAD_SNP rs1823068 chr5 58676049 Intron 7 ASSOCIATION 17903308 Sleepiness 7.52287874528 PDE4D LEAD_SNP rs702543 chr5 58842774 Intron 5b ASSOCIATION 17667963 Neuroticism 5.69897000434 PDE4D LEAD_SNP rs1588265 chr5 59369794 Intron 7 ASSOCIATION 19426955 Asthma 7.52287874528 PDE4D - RPL31P8 FUNCTIONAL_SNP rs13154041 chr5 59318717 Intron 5b 51077 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.763;0.541 FUNCTIONAL_SNP rs1508864 chr5 59352811 Intron 6 16983 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2962966 chr5 59464226 Intron 6 94432 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.644 FUNCTIONAL_SNP rs2962971 chr5 59484011 Intron 6 114217 CEU:0.955;0.837, CHB:1.0;0.631, JPT:1.0;0.623 FUNCTIONAL_SNP rs1544788 chr5 59440496 Intron 6 70702 CEU:1.0;1.0, CHB:1.0;0.852, JPT:1.0;0.945 FUNCTIONAL_SNP rs6449456 chr5 59435449 Intron 6 65655 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4131157 chr5 59365464 Intron 6 4330 CEU:1.0;1.0 FUNCTIONAL_SNP rs2548658 chr5 59394474 Intron 6 24680 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.822;0.621 FUNCTIONAL_SNP rs10461667 chr5 59368458 Intron 6 1336 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.934, YRI:1.0;0.826 FUNCTIONAL_SNP rs1508859 chr5 59354097 Intron 6 15697 CEU:1.0;1.0 FUNCTIONAL_SNP rs2962962 chr5 59452141 Intron 7 82347 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.644 FUNCTIONAL_SNP rs2962972 chr5 59484155 Intron 7 114361 CEU:0.955;0.837, CHB:1.0;0.631, JPT:1.0;0.623 FUNCTIONAL_SNP rs2962975 chr5 59456978 Intron 7 87184 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.644 FUNCTIONAL_SNP rs2662444 chr5 59394184 Intron 7 24390 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6887486 chr5 59432851 Intron 7 63057 CEU:1.0;1.0, CHB:1.0;0.699, JPT:1.0;0.888 FUNCTIONAL_SNP rs2016324 chr5 59328912 Intron 7 40882 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1544790 chr5 59439270 Intron 7 69476 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.776 FUNCTIONAL_SNP rs1544791 chr5 59439082 Intron 7 69288 CEU:1.0;1.0, CHB:1.0;0.699, JPT:1.0;0.889 FUNCTIONAL_SNP rs7703245 chr5 59330489 Intron 7 39305 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.833;0.641 FUNCTIONAL_SNP rs2910834 chr5 59453930 Intron 7 84136 CEU:1.0;1.0, CHB:1.0;0.699, JPT:1.0;0.555 FUNCTIONAL_SNP rs1100918 chr5 59386615 Intron 7 16821 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2136203 chr5 59382324 Intron 7 12530 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4700354 chr5 59328783 Intron 7 41011 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4700355 chr5 59332249 Intron 7 37545 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.822;0.62 FUNCTIONAL_SNP rs6872268 chr5 59432804 Intron 7 63010 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4700366 chr5 59428094 Intron 7 58300 CEU:1.0;1.0, CHB:1.0;0.69, JPT:1.0;0.89 FUNCTIONAL_SNP rs1155796 chr5 59461360 Intron 7 91566 CEU:0.955;0.872, CHB:1.0;1.0, JPT:1.0;0.644 FUNCTIONAL_SNP rs983280 chr5 59445137 Intron 7 75343 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0 FUNCTIONAL_SNP rs13164245 chr5 59320432 Intron 7 49362 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.91;0.703 FUNCTIONAL_SNP rs4547891 chr5 59423078 Intron 7 53284 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7731007 chr5 59363831 Intron 7 5963 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13164971 chr5 59378653 Intron 7 8859 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2548659 chr5 59383886 Intron 7 14092 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.776 FUNCTIONAL_SNP rs7732670 chr5 59433962 Intron 7 64168 CEU:1.0;1.0, CHB:1.0;0.737, JPT:1.0;0.89 LEAD_SNP rs255414 chr5 62817900 Intergenic 7 ASSOCIATION 20935630 Body mass index 6.0 ISCA1P1 - HTR1A FUNCTIONAL_SNP rs659217 chr5 62832795 Intergenic 6 14895 CEU:1.0;1.0, YRI:0.884;0.702 FUNCTIONAL_SNP rs664625 chr5 62834972 Intergenic 7 17072 CEU:1.0;1.0, YRI:0.882;0.697 FUNCTIONAL_SNP rs1024980 chr5 62831601 Intergenic 7 13701 CEU:1.0;1.0, YRI:0.884;0.702 FUNCTIONAL_SNP rs30903 chr5 62824362 Intergenic 7 6462 CEU:1.0;1.0 LEAD_SNP rs10514995 chr5 65739439 Intron 5b ASSOCIATION 20031603 RR interval (heart rate) 6.0 FLJ46010 - MAST4 FUNCTIONAL_SNP rs12513889 chr5 65737166 Intron 6 2273 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6449809 chr5 65737290 Intron 6 2149 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.717 FUNCTIONAL_SNP rs10940062 chr5 65749480 Intron 6 10041 CEU:0.947;0.852, CHB:1.0;0.64, JPT:1.0;0.713 FUNCTIONAL_SNP rs1317632 chr5 65746468 Intron 7 7029 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.86 FUNCTIONAL_SNP rs16895200 chr5 65747292 Intron 7 7853 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.905 FUNCTIONAL_SNP rs4700112 chr5 65748842 Intron 7 9403 CEU:0.951;0.863, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.705 LEAD_SNP rs10069397 chr5 65783709 Intron 6 ASSOCIATION 20595579 Longevity 7.30102999566 FLJ46010 - MAST4 FUNCTIONAL_SNP rs6875036 chr5 65823607 Intron 4 39898 CEU:0.958;0.847, CHB:1.0;0.586 FUNCTIONAL_SNP rs4535412 chr5 65799972 Intron 5a 16263 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs12332381 chr5 65814898 Intron 5b 31189 CEU:0.958;0.847, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;0.843 FUNCTIONAL_SNP rs6887629 chr5 65813347 Intron 5b 29638 CEU:0.958;0.847, CHB:1.0;0.586 FUNCTIONAL_SNP rs13163034 chr5 65814041 Intron 5b 30332 CEU:0.957;0.844, CHB:1.0;0.741, JPT:1.0;1.0, YRI:0.944;0.891 FUNCTIONAL_SNP rs6449817 chr5 65824452 Intron 6 40743 CEU:0.917;0.808, CHB:1.0;0.586 FUNCTIONAL_SNP rs12189338 chr5 65798513 Intron 6 14804 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs4434340 chr5 65808297 Intron 6 24588 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs4543219 chr5 65798984 Intron 6 15275 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs4371707 chr5 65823758 Intron 6 40049 CEU:0.958;0.847, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12187920 chr5 65821018 Intron 7 37309 CEU:0.958;0.847, CHB:1.0;0.586 FUNCTIONAL_SNP rs12187925 chr5 65821082 Intron 7 37373 CEU:0.958;0.847, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4132767 chr5 65804261 Intron 7 20552 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs2371240 chr5 65751963 Intron 7 31746 CEU:1.0;0.887, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;0.945 FUNCTIONAL_SNP rs12659634 chr5 65807950 Intron 7 24241 CEU:1.0;1.0 FUNCTIONAL_SNP rs4296751 chr5 65822100 Intron 7 38391 CEU:0.958;0.847, CHB:1.0;0.586 FUNCTIONAL_SNP rs4565170 chr5 65812538 Intron 7 28829 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs10940063 chr5 65761722 Intron 7 21987 CEU:0.955;0.837, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7736512 chr5 65787193 Intron 7 3484 CEU:1.0;0.96, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4421062 chr5 65805854 Intron 7 22145 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs4446416 chr5 65806696 Intron 7 22987 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs13154387 chr5 65808961 Intron 7 25252 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs3828694 chr5 65803878 Intron 7 20169 CEU:1.0;1.0, CHB:1.0;0.658, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4308442 chr5 65799524 Intron 7 15815 CEU:1.0;1.0, CHB:1.0;0.584 FUNCTIONAL_SNP rs4700124 chr5 65816407 Intron 7 32698 CEU:0.958;0.847, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7733469 chr5 65798492 Intron 7 14783 CEU:1.0;0.923, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs4607312 chr5 65802568 Intron 7 18859 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs6897379 chr5 65796062 Intron 7 12353 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs6865533 chr5 65800529 Intron 7 16820 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs4289523 chr5 65802498 Intron 7 18789 CEU:1.0;1.0, CHB:1.0;0.586 FUNCTIONAL_SNP rs4699873 chr5 65804156 Intron 7 20447 CEU:0.957;0.844, CHB:1.0;0.741, JPT:1.0;0.659 FUNCTIONAL_SNP rs4623101 chr5 65794264 Intron 7 10555 CEU:1.0;1.0, CHB:1.0;0.586 LEAD_SNP rs1697137 chr5 66452175 Intron 7 ASSOCIATION 20009918 Carotid atherosclerosis in HIV infection 5.69897000434 MAST4 LEAD_SNP rs2199161 chr5 71410356 Intron 7 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.69897000434 MAP1B FUNCTIONAL_SNP rs1979309 chr5 71407544 Intron 5b 2812 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2337390 chr5 71408867 Intron 5b 1489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1979310 chr5 71407658 Intron 7 2698 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1531310 chr5 71411004 Intron 7 648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1979311 chr5 71407890 Intron 7 2466 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs10515148 chr5 71716928 Intergenic 7 ASSOCIATION 17903296 Hip geometry 6.22184874962 RPL10AP8 - ZNF366 LEAD_SNP rs7702331 chr5 72551134 Intron 7 ASSOCIATION 21102463 Crohn's disease 11.2218487496 TMEM174 - FOXD1 FUNCTIONAL_SNP rs10061469 chr5 72518148 Intron 4 32986 CEU:1.0;0.847, CHB:1.0;0.857, JPT:1.0;0.753 FUNCTIONAL_SNP rs4457052 chr5 72528922 Intron 5b 22212 CEU:1.0;0.883, CHB:1.0;0.924, JPT:1.0;0.805 FUNCTIONAL_SNP rs6881396 chr5 72559339 Intron 5b 8205 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.763 FUNCTIONAL_SNP rs11953937 chr5 72520347 Intron 6 30787 CEU:1.0;0.847, CHB:1.0;0.857, JPT:1.0;0.753 FUNCTIONAL_SNP rs6875977 chr5 72520535 Intron 6 30599 CEU:1.0;0.842, CHB:1.0;0.857, JPT:1.0;0.753 FUNCTIONAL_SNP rs4507470 chr5 72515051 Intron 6 36083 CEU:1.0;0.845, CHB:1.0;0.857, JPT:1.0;0.753, YRI:0.771;0.523 FUNCTIONAL_SNP rs6881883 chr5 72521622 Intron 6 29512 CEU:1.0;0.847, CHB:1.0;0.857, JPT:1.0;0.753 FUNCTIONAL_SNP rs6452898 chr5 72541598 Intron 7 9536 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.818;0.545 FUNCTIONAL_SNP rs4262084 chr5 72521202 Intron 7 29932 CEU:1.0;0.847, CHB:1.0;0.857, JPT:1.0;0.753 LEAD_SNP rs16871023 chr5 73215237 Intron 5b ASSOCIATION 21502573 D-dimer levels 6.0 RGNEF - ENC1 FUNCTIONAL_SNP rs16871035 chr5 73218861 Intron 4 3624 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs7703051 chr5 74625487 Intron 6 ASSOCIATION 18802019 LDL cholesterol 8.0 ANKRD31 - HMGCR FUNCTIONAL_SNP rs4549504 chr5 74808237 Exon,non-coding 4 182750 CEU:1.0;0.887, CHB:1.0;0.909, JPT:1.0;0.908 FUNCTIONAL_SNP rs12916 chr5 74656539 Exon,non-coding 6 31052 CEU:0.958;0.881, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.932;0.522 FUNCTIONAL_SNP rs10474433 chr5 74616843 Intron 2b 8644 CEU:1.0;0.813 FUNCTIONAL_SNP rs2878417 chr5 74617262 Intron 2b 8225 CEU:1.0;0.96, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.635 FUNCTIONAL_SNP rs17671591 chr5 74615021 Intergenic 3a 10466 CEU:1.0;0.813 FUNCTIONAL_SNP rs4704220 chr5 74757556 Intron 4 132069 CEU:1.0;0.887, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs13358429 chr5 74618186 Intron 4 7301 CEU:1.0;0.813, JPT:1.0;0.526 FUNCTIONAL_SNP rs4604177 chr5 74808880 Intron 5b 183393 CEU:1.0;0.887, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs1423527 chr5 74602699 Intergenic 5b 22788 CEU:1.0;0.958, CHB:0.945;0.773, JPT:1.0;0.67, YRI:0.946;0.591 FUNCTIONAL_SNP rs3846663 chr5 74655726 Intron 6 30239 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs11749783 chr5 74626082 Intron 6 595 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3843481 chr5 74628375 Intron 6 2888 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12654264 chr5 74648603 Intron 6 23116 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.912 FUNCTIONAL_SNP rs2335418 chr5 74603479 Intergenic 6 22008 CEU:0.958;0.846, CHB:0.945;0.773, JPT:1.0;0.67 FUNCTIONAL_SNP rs4704221 chr5 74759183 Intron 6 133696 CEU:1.0;0.887, CHB:1.0;0.909, JPT:1.0;0.908 FUNCTIONAL_SNP rs10056811 chr5 74605220 Intergenic 6 20267 CEU:1.0;0.813 FUNCTIONAL_SNP rs6871667 chr5 74604742 Intergenic 6 20745 CEU:0.958;0.882, CHB:0.852;0.725, JPT:1.0;0.651 FUNCTIONAL_SNP rs3846662 chr5 74651084 Intron 7 25597 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6896136 chr5 74787310 Intron 7 161823 CEU:1.0;0.887, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs11957260 chr5 74608732 Intergenic 7 16755 CEU:0.958;0.846, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs3843480 chr5 74624482 Intron 7 1005 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4704223 chr5 74773420 Intron 7 147933 CEU:1.0;0.887, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs6878990 chr5 74689249 Intron 7 63762 CEU:0.958;0.846, CHB:1.0;0.868, JPT:1.0;0.902 FUNCTIONAL_SNP rs10045497 chr5 74636484 Intron 7 10997 CEU:1.0;1.0, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs4704219 chr5 74748505 Intron 7 123018 CEU:1.0;0.92, CHB:1.0;0.907, JPT:1.0;0.908 LEAD_SNP rs12654264 chr5 74648603 Intron 6 ASSOCIATION 18193044 LDL cholesterol 20.0 HMGCR FUNCTIONAL_SNP rs11749783 chr5 74626082 Intron 6 22521 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.912 FUNCTIONAL_SNP rs7703051 chr5 74625487 Intron 6 23116 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.912 FUNCTIONAL_SNP rs3843481 chr5 74628375 Intron 6 20228 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs3843480 chr5 74624482 Intron 7 24121 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.909 LEAD_SNP rs3846662 chr5 74651084 Intron 7 ASSOCIATION 19060911 Cholesterol, total 18.5228787453 HMGCR ASSOCIATION 19060911 LDL cholesterol 10.6989700043 HMGCR FUNCTIONAL_SNP rs4549504 chr5 74808237 Exon,non-coding 4 157153 CEU:1.0;0.961, CHB:1.0;0.909, JPT:1.0;0.908, YRI:1.0;1.0 FUNCTIONAL_SNP rs4704220 chr5 74757556 Intron 4 106472 CEU:1.0;0.961, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4604177 chr5 74808880 Intron 5b 157796 CEU:1.0;0.961, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4704221 chr5 74759183 Intron 6 108099 CEU:1.0;0.961, CHB:1.0;0.909, JPT:1.0;0.908, YRI:1.0;1.0 FUNCTIONAL_SNP rs6896136 chr5 74787310 Intron 7 136226 CEU:1.0;0.961, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs4704223 chr5 74773420 Intron 7 122336 CEU:1.0;0.961, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6878990 chr5 74689249 Intron 7 38165 CEU:1.0;0.924, CHB:1.0;0.868, JPT:1.0;0.902, YRI:1.0;0.866 FUNCTIONAL_SNP rs4704219 chr5 74748505 Intron 7 97421 CEU:1.0;0.96, CHB:1.0;0.907, JPT:1.0;0.908, YRI:1.0;1.0 LEAD_SNP rs3846663 chr5 74655726 Intron 6 ASSOCIATION 19197348 Quantitative traits 5.22184874962 HMGCR ASSOCIATION 19197348 Quantitative traits 6.0 HMGCR ASSOCIATION 19060906 LDL cholesterol 11.096910013 HMGCR FUNCTIONAL_SNP rs12916 chr5 74656539 Exon,non-coding 6 813 CEU:0.959;0.92, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.942 FUNCTIONAL_SNP rs10045497 chr5 74636484 Intron 7 19242 CEU:1.0;1.0, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12916 chr5 74656539 Exon,non-coding 6 ASSOCIATION 20864672 LDL cholesterol 11.0 HMGCR FUNCTIONAL_SNP rs2878417 chr5 74617262 Intron 2b 39277 CEU:0.918;0.842, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs1423527 chr5 74602699 Intergenic 5b 53840 CEU:0.956;0.875, CHB:0.944;0.734, JPT:1.0;0.67 FUNCTIONAL_SNP rs11749783 chr5 74626082 Intron 6 30457 CEU:0.958;0.881, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.932;0.522 FUNCTIONAL_SNP rs3846663 chr5 74655726 Intron 6 813 CEU:0.959;0.92, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.942 FUNCTIONAL_SNP rs7703051 chr5 74625487 Intron 6 31052 CEU:0.958;0.881, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.932;0.522 FUNCTIONAL_SNP rs3843481 chr5 74628375 Intron 6 28164 CEU:0.958;0.881, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs12654264 chr5 74648603 Intron 6 7936 CEU:0.958;0.881, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.933;0.574 FUNCTIONAL_SNP rs3846662 chr5 74651084 Intron 7 5455 CEU:1.0;0.818, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs6878990 chr5 74689249 Intron 7 32710 CEU:0.956;0.81, CHB:1.0;0.91, JPT:1.0;0.902 FUNCTIONAL_SNP rs3843480 chr5 74624482 Intron 7 32057 CEU:0.956;0.841, CHB:1.0;0.951, JPT:1.0;1.0, YRI:0.927;0.505 FUNCTIONAL_SNP rs10045497 chr5 74636484 Intron 7 20055 CEU:0.958;0.917, CHB:0.948;0.855, JPT:1.0;1.0, YRI:1.0;0.942 FUNCTIONAL_SNP rs4704219 chr5 74748505 Intron 7 91966 CEU:0.954;0.803, CHB:0.949;0.858, JPT:1.0;0.908 LEAD_SNP rs2112347 chr5 75015242 Intergenic 6 ASSOCIATION 20935630 Body mass index 12.6989700043 POC5 FUNCTIONAL_SNP rs40060 chr5 74967386 Exon,non-coding 5b 47856 CEU:1.0;0.842, CHB:0.935;0.623, JPT:1.0;0.569, YRI:0.958;0.712 FUNCTIONAL_SNP rs34358 chr5 74965122 Intron 4 50120 CEU:1.0;0.842, CHB:0.938;0.659, JPT:1.0;0.569, YRI:0.958;0.712 FUNCTIONAL_SNP rs34361 chr5 74971846 Intron 4 43396 CEU:1.0;0.842, CHB:0.932;0.589, YRI:0.806;0.582 FUNCTIONAL_SNP rs3797580 chr5 75003056 Intron 5a 12186 CEU:1.0;0.913, CHB:1.0;0.788, JPT:1.0;0.899, YRI:1.0;0.862 FUNCTIONAL_SNP rs6874626 chr5 74999576 Intron 6 15666 CEU:1.0;1.0, CHB:1.0;0.913, JPT:1.0;1.0, YRI:1.0;0.935 FUNCTIONAL_SNP rs10057967 chr5 74997756 Intron 6 17486 CEU:1.0;0.919, CHB:1.0;0.751, JPT:1.0;0.902, YRI:1.0;0.896 FUNCTIONAL_SNP rs16872768 chr5 74982207 Intron 7 33035 CEU:1.0;1.0, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;0.935 FUNCTIONAL_SNP rs34359 chr5 74967693 Intergenic 7 47549 CEU:1.0;0.849, CHB:0.935;0.647, JPT:1.0;0.593, YRI:0.962;0.728 FUNCTIONAL_SNP rs34360 chr5 74967708 Intergenic 7 47534 CEU:1.0;0.849, CHB:0.934;0.593, JPT:1.0;0.57, YRI:0.961;0.775 LEAD_SNP rs457717 chr5 75920972 Intron 6 ASSOCIATION 20068591 Hearing impairment 6.39794000867 F2RL2;IQGAP2 FUNCTIONAL_SNP rs2455230 chr5 75932965 Coding 7 11993 CEU:1.0;0.822, CHB:1.0;0.915, JPT:0.953;0.867, YRI:0.826;0.529 FUNCTIONAL_SNP rs2910819 chr5 75932869 Coding 7 11897 CEU:1.0;0.815, CHB:1.0;0.911, JPT:1.0;0.909, YRI:1.0;0.607 FUNCTIONAL_SNP rs2431349 chr5 75921330 Intron 4 358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.859 FUNCTIONAL_SNP rs2069641 chr5 75919749 Intron 5a 1223 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs410262 chr5 75927188 Intron 5a 6216 CEU:1.0;0.815, CHB:0.905;0.819, JPT:1.0;0.909 FUNCTIONAL_SNP rs428121 chr5 75927222 Intron 5a 6250 CEU:1.0;0.815, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs457233 chr5 75926863 Intron 6 5891 CEU:1.0;0.84, CHB:1.0;0.915, JPT:0.946;0.85 FUNCTIONAL_SNP rs2455219 chr5 75922581 Intron 6 1609 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.852 FUNCTIONAL_SNP rs1697844 chr5 75929833 Intron 6 8861 CEU:1.0;0.822, CHB:1.0;0.915, JPT:0.953;0.867 FUNCTIONAL_SNP rs2937415 chr5 75933097 Intron 7 12125 CEU:1.0;0.815, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs1697845 chr5 75922504 Intron 7 1532 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs2455222 chr5 75923459 Intron 7 2487 CEU:1.0;0.82, CHB:1.0;0.872, JPT:1.0;0.822, YRI:1.0;0.62 FUNCTIONAL_SNP rs2432180 chr5 75930862 Intron 7 9890 CEU:1.0;0.849, CHB:1.0;0.913, JPT:0.953;0.867 FUNCTIONAL_SNP rs2455227 chr5 75930403 Intron 7 9431 CEU:1.0;0.82, CHB:1.0;0.915, JPT:0.953;0.867 FUNCTIONAL_SNP rs441157 chr5 75927938 Intron 7 6966 CEU:1.0;0.822, CHB:1.0;0.911, JPT:0.953;0.867 FUNCTIONAL_SNP rs2909890 chr5 75929103 Intron 7 8131 CEU:1.0;0.839, CHB:1.0;0.907, JPT:0.949;0.858, YRI:0.848;0.501 LEAD_SNP rs4457053 chr5 76424949 Intergenic 6 ASSOCIATION 20581827 Type 2 diabetes 11.5228787453 SNORA47 - PDE8B FUNCTIONAL_SNP rs6878122 chr5 76427311 Intergenic 5b 2362 CEU:0.947;0.897, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs7708285 chr5 76425867 Intergenic 7 918 CEU:0.94;0.834, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs163030 chr5 76781471 Intron 6 ASSOCIATION 21502949 Caudate nucleus volume 6.69897000434 WDR41 FUNCTIONAL_SNP rs33204 chr5 76734084 Coding 7 47387 CEU:1.0;0.886, CHB:1.0;0.713, JPT:1.0;0.606 FUNCTIONAL_SNP rs40594 chr5 76722443 Exon,non-coding 4 59028 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs335635 chr5 76725582 Exon,non-coding 6 55889 CEU:0.96;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.903;0.632 FUNCTIONAL_SNP rs335636 chr5 76724599 Exon,non-coding 5b 56872 CEU:1.0;0.96, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.917;0.776 FUNCTIONAL_SNP rs41105 chr5 76787692 Intron 2b 6221 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.535 FUNCTIONAL_SNP rs40595 chr5 76746093 Intron 4 35378 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs163027 chr5 76782241 Intron 4 770 CEU:1.0;0.886, CHB:1.0;0.785, JPT:1.0;0.668 FUNCTIONAL_SNP rs40012 chr5 76788442 Intergenic 4 6971 CEU:1.0;0.919, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.755 FUNCTIONAL_SNP rs163023 chr5 76786369 Intron 5a 4898 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3846673 chr5 76835373 Intergenic 5b 53902 CEU:1.0;0.851, CHB:0.946;0.81, JPT:0.892;0.796 FUNCTIONAL_SNP rs163037 chr5 76779753 Intron 5b 1718 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs335612 chr5 76748373 Intron 5b 33098 CEU:1.0;0.881, CHB:1.0;0.785, JPT:1.0;0.668 FUNCTIONAL_SNP rs335623 chr5 76731267 Intron 5b 50204 CEU:0.954;0.836, CHB:1.0;0.815, JPT:1.0;0.668 FUNCTIONAL_SNP rs33198 chr5 76789265 Intergenic 5b 7794 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs689661 chr5 76776756 Intron 5b 4715 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs6453315 chr5 76807697 Intergenic 6 26226 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs251470 chr5 76778485 Intron 6 2986 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs179815 chr5 76749435 Intron 6 32036 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs163018 chr5 76735198 Intron 6 46273 CEU:1.0;0.923, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs2061515 chr5 76809060 Intergenic 6 27589 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs163034 chr5 76780238 Intron 6 1233 CEU:1.0;0.886, CHB:1.0;0.785, JPT:1.0;0.668 FUNCTIONAL_SNP rs163035 chr5 76780042 Intron 6 1429 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3911463 chr5 76820085 Intergenic 6 38614 CEU:1.0;0.848, CHB:0.945;0.848, JPT:0.882;0.666 FUNCTIONAL_SNP rs335601 chr5 76752250 Intron 6 29221 CEU:1.0;0.886, CHB:1.0;0.781, JPT:1.0;0.668 FUNCTIONAL_SNP rs335604 chr5 76750386 Intron 6 31085 CEU:1.0;1.0, CHB:1.0;0.81, JPT:1.0;0.671 FUNCTIONAL_SNP rs335609 chr5 76747087 Intron 6 34384 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs335621 chr5 76731784 Intron 6 49687 CEU:1.0;0.961, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs335629 chr5 76729521 Intron 6 51950 CEU:1.0;0.923, CHB:1.0;0.823, JPT:1.0;0.668 FUNCTIONAL_SNP rs448293 chr5 76738927 Intron 6 42544 CEU:1.0;0.96, CHB:0.943;0.732, JPT:1.0;0.663 FUNCTIONAL_SNP rs463655 chr5 76770358 Intron 6 11113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs461148 chr5 76736016 Intron 6 45455 CEU:1.0;0.886, CHB:0.943;0.732, JPT:1.0;0.668 FUNCTIONAL_SNP rs1678772 chr5 76738870 Intron 6 42601 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs410620 chr5 76760495 Intron 6 20976 CEU:1.0;1.0, CHB:1.0;0.905, JPT:1.0;0.85, YRI:0.838;0.566 FUNCTIONAL_SNP rs765961 chr5 76795397 Intergenic 7 13926 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs6453314 chr5 76807626 Intergenic 7 26155 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.535 FUNCTIONAL_SNP rs6453316 chr5 76807716 Intergenic 7 26245 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.535 FUNCTIONAL_SNP rs6453317 chr5 76811838 Intergenic 7 30367 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2560076 chr5 76736907 Intron 7 44564 CEU:1.0;0.959, CHB:0.943;0.732, JPT:1.0;0.668 FUNCTIONAL_SNP rs163028 chr5 76781787 Intron 7 316 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs163029 chr5 76781724 Intron 7 253 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.667 FUNCTIONAL_SNP rs163031 chr5 76781324 Intron 7 147 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.666 FUNCTIONAL_SNP rs163032 chr5 76780753 Intron 7 718 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs335610 chr5 76747820 Intron 7 33651 CEU:1.0;0.961, CHB:1.0;0.785, JPT:1.0;0.668 FUNCTIONAL_SNP rs335611 chr5 76747860 Intron 7 33611 CEU:1.0;0.96, CHB:1.0;0.785, JPT:0.924;0.603 FUNCTIONAL_SNP rs335622 chr5 76731495 Intron 7 49976 CEU:0.957;0.846, CHB:1.0;0.785, JPT:1.0;0.668 FUNCTIONAL_SNP rs335624 chr5 76730936 Intron 7 50535 CEU:0.96;0.921, CHB:1.0;0.785, JPT:1.0;0.668 FUNCTIONAL_SNP rs335654 chr5 76763919 Intron 7 17552 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs335668 chr5 76782664 Intron 7 1193 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs335669 chr5 76782638 Intron 7 1167 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10942824 chr5 76796742 Intergenic 7 15271 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs152952 chr5 76785114 Intron 7 3643 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7714170 chr5 76796459 Intergenic 7 14988 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.535 FUNCTIONAL_SNP rs335603 chr5 76751183 Intron 7 30288 CEU:1.0;0.869, CHB:0.939;0.75, JPT:1.0;0.704 LEAD_SNP rs6881634 chr5 77630854 Intergenic 5b ASSOCIATION 19668339 Hippocampal atrophy 5.69897000434 TRNAQ33P - SCAMP1 LEAD_SNP rs337847 chr5 78259888 Intron 7 ASSOCIATION 19668339 Hippocampal atrophy 5.15490195999 ARSB LEAD_SNP rs2052550 chr5 78272942 Intron 5b ASSOCIATION 19084217 Serum markers of iron status 5.09691001301 ARSB LEAD_SNP rs10078095 chr5 78756778 Intron 3b ASSOCIATION 18193045 Height 5.52287874528 HOMER1 LEAD_SNP rs7713917 chr5 78829249 Intergenic 7 ASSOCIATION 20673876 Major depressive disorder 6.0 RPL7AP32 - PAPD4 FUNCTIONAL_SNP rs10041840 chr5 78828196 Intergenic 6 1053 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.895, YRI:1.0;0.703 FUNCTIONAL_SNP rs736201 chr5 78837556 Intergenic 6 8307 CEU:1.0;0.957, CHB:0.766;0.586, YRI:0.877;0.616 FUNCTIONAL_SNP rs12513536 chr5 78848000 Intergenic 7 18751 CEU:0.952;0.827, CHB:0.749;0.531, YRI:1.0;0.612 FUNCTIONAL_SNP rs10040177 chr5 78812560 Intergenic 7 16689 CEU:1.0;1.0, CHB:1.0;0.94, JPT:0.865;0.748, YRI:1.0;1.0 FUNCTIONAL_SNP rs6885689 chr5 78847711 Intergenic 7 18462 CEU:0.952;0.827, YRI:0.861;0.523 LEAD_SNP rs13358260 chr5 78845711 Intergenic 7 ASSOCIATION 21700879 Adiponectin levels 5.30102999566 RPL7AP32 - PAPD4 FUNCTIONAL_SNP rs12520582 chr5 78823934 Intergenic 7 21777 CEU:1.0;0.848, CHB:1.0;0.851, JPT:1.0;0.758 FUNCTIONAL_SNP rs13354910 chr5 78832384 Intergenic 7 13327 CEU:1.0;0.848, CHB:1.0;0.851, JPT:1.0;0.758 LEAD_SNP rs410644 chr5 81087534 Intergenic 7 ASSOCIATION 21079607 Anorexia nervosa 5.15490195999 SSBP2 - SHFM1P1 FUNCTIONAL_SNP rs436064 chr5 81069494 Intergenic 5a 18040 CEU:0.958;0.814 LEAD_SNP rs1032757 chr5 81939318 Intergenic 7 ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 5.69897000434 ATP6AP1L - RPL5P16 FUNCTIONAL_SNP rs11738941 chr5 81939534 Intergenic 7 216 CEU:1.0;1.0 LEAD_SNP rs310501 chr5 82889910 Intergenic 7 ASSOCIATION 20516156 Major depressive disorder 5.15490195999 VCAN - HAPLN1 FUNCTIONAL_SNP rs2242128 chr5 82940273 Coding 2b 50363 CEU:0.952;0.864 FUNCTIONAL_SNP rs515334 chr5 82901788 Intergenic 5a 11878 CEU:0.955;0.873, CHB:0.928;0.679 FUNCTIONAL_SNP rs485996 chr5 82887510 Intergenic 5b 2400 CEU:0.95;0.859, CHB:1.0;1.0, JPT:1.0;0.875 FUNCTIONAL_SNP rs310519 chr5 82885093 Intergenic 5b 4817 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.833 FUNCTIONAL_SNP rs12697730 chr5 82908474 Intergenic 6 18564 CEU:0.911;0.83, CHB:0.928;0.679, JPT:1.0;0.5 FUNCTIONAL_SNP rs569733 chr5 82913037 Intergenic 6 23127 CEU:0.911;0.83, CHB:0.928;0.679, JPT:1.0;0.5 FUNCTIONAL_SNP rs2607148 chr5 82911585 Intergenic 6 21675 CEU:0.911;0.83, CHB:0.928;0.679, JPT:1.0;0.5 FUNCTIONAL_SNP rs309562 chr5 82895257 Intergenic 6 5347 CEU:0.955;0.873, CHB:0.924;0.603 FUNCTIONAL_SNP rs163144 chr5 82920267 Intergenic 6 30357 CEU:0.911;0.83, CHB:0.928;0.679, JPT:1.0;0.5 FUNCTIONAL_SNP rs619991 chr5 82909582 Intergenic 6 19672 CEU:0.911;0.83, CHB:0.928;0.679, JPT:1.0;0.5 FUNCTIONAL_SNP rs178023 chr5 82885527 Intergenic 6 4383 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs628845 chr5 82903739 Intergenic 6 13829 CEU:0.953;0.868, CHB:0.928;0.679, JPT:1.0;0.5 FUNCTIONAL_SNP rs680209 chr5 82907475 Intergenic 7 17565 CEU:0.955;0.873, CHB:0.928;0.679, JPT:1.0;0.5 FUNCTIONAL_SNP rs508080 chr5 82902604 Intergenic 7 12694 CEU:0.955;0.873, CHB:0.928;0.679, JPT:1.0;0.5 FUNCTIONAL_SNP rs1457081 chr5 82940510 Intron 7 50600 CEU:0.909;0.827 FUNCTIONAL_SNP rs309568 chr5 82897718 Intergenic 7 7808 CEU:0.954;0.872, CHB:0.926;0.64 FUNCTIONAL_SNP rs309572 chr5 82898362 Intergenic 7 8452 CEU:0.955;0.873, CHB:0.926;0.64 FUNCTIONAL_SNP rs309583 chr5 82870085 Intron 7 19825 CEU:1.0;0.914 FUNCTIONAL_SNP rs309585 chr5 82868173 Intron 7 21737 CEU:1.0;0.914 FUNCTIONAL_SNP rs540133 chr5 82901393 Intergenic 7 11483 CEU:0.955;0.873, CHB:0.928;0.679 FUNCTIONAL_SNP rs566008 chr5 82903716 Intergenic 7 13806 CEU:0.946;0.849, CHB:0.92;0.653 LEAD_SNP rs4466137 chr5 82985739 Intron 6 ASSOCIATION 17903305 Prostate cancer 5.52287874528 HAPLN1 LEAD_SNP rs347344 chr5 83499643 Intron 7 ASSOCIATION 20237162 Plasma chemerin levels 6.0 EDIL3 LEAD_SNP rs7717527 chr5 83856911 Intergenic 6 ASSOCIATION 20595579 Longevity 6.69897000434 EDIL3 - RPL5P17 FUNCTIONAL_SNP rs12521201 chr5 83727103 Intergenic 5b 129808 CEU:0.917;0.841, YRI:1.0;1.0 FUNCTIONAL_SNP rs10067547 chr5 83708800 Intergenic 6 148111 CEU:1.0;0.913 FUNCTIONAL_SNP rs10037310 chr5 83756654 Intergenic 6 100257 CEU:1.0;0.918, YRI:1.0;1.0 FUNCTIONAL_SNP rs13359765 chr5 83870263 Intergenic 6 13352 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10067300 chr5 83842687 Intergenic 7 14224 CEU:1.0;0.838, CHB:1.0;1.0 FUNCTIONAL_SNP rs7706311 chr5 83705694 Intergenic 7 151217 CEU:1.0;0.918 FUNCTIONAL_SNP rs10051401 chr5 83815413 Intergenic 7 41498 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1510061 chr5 83815103 Intergenic 7 41808 CEU:1.0;0.838, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2036093 chr5 83884333 Intergenic 7 27422 CEU:1.0;1.0 LEAD_SNP rs4920799 chr5 84606528 Intergenic 7 ASSOCIATION 17903301 Echocardiographic traits 5.15490195999 EDIL3 - RPL5P17 FUNCTIONAL_SNP rs10071789 chr5 84609984 Intergenic 7 3456 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.842 FUNCTIONAL_SNP rs733481 chr5 84610613 Intergenic 7 4085 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2032794 chr5 86432617 Intron 7 ASSOCIATION 21173776 Personality dimensions 5.69897000434 RPL10AP9 - RASA1 FUNCTIONAL_SNP rs16902538 chr5 86417013 Intron 4 15604 CEU:1.0;0.868, CHB:1.0;0.754, JPT:1.0;0.797 FUNCTIONAL_SNP rs16902548 chr5 86433719 Intergenic 5b 1102 CEU:1.0;0.805, CHB:1.0;0.709, JPT:1.0;0.92 FUNCTIONAL_SNP rs4141503 chr5 86424676 Intron 5b 7941 CEU:1.0;0.868, CHB:1.0;0.754, JPT:1.0;0.797 FUNCTIONAL_SNP rs17629760 chr5 86424059 Intron 5b 8558 CEU:1.0;0.922, CHB:1.0;0.754, JPT:1.0;0.902 FUNCTIONAL_SNP rs30421 chr5 86460539 Intergenic 5b 27922 CEU:1.0;0.805, CHB:1.0;0.709, JPT:1.0;1.0 FUNCTIONAL_SNP rs1477268 chr5 86427866 Intron 6 4751 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2544698 chr5 86454831 Intergenic 6 22214 CEU:1.0;0.933, CHB:1.0;0.709, JPT:1.0;0.92 FUNCTIONAL_SNP rs17591778 chr5 86420392 Intron 6 12225 CEU:0.928;0.804, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17629700 chr5 86420508 Intron 7 12109 CEU:1.0;0.868, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2637074 chr5 86461699 Intergenic 7 29082 CEU:0.932;0.869, CHB:0.762;0.581, JPT:0.913;0.714 FUNCTIONAL_SNP rs2624220 chr5 86451404 Intergenic 7 18787 CEU:1.0;0.932, CHB:1.0;0.709, JPT:1.0;0.833 LEAD_SNP rs17421627 chr5 87847586 Intergenic 7 ASSOCIATION 21060863 Retinal vascular caliber 15.15490196 RPS3AP22 - MEF2C FUNCTIONAL_SNP rs2216596 chr5 87798055 Intergenic 5b 49531 CEU:1.0;0.907 FUNCTIONAL_SNP rs7718045 chr5 87814652 Intergenic 5b 32934 CEU:1.0;1.0 FUNCTIONAL_SNP rs2161230 chr5 87814494 Intergenic 5b 33092 CEU:1.0;1.0 FUNCTIONAL_SNP rs2194025 chr5 87798236 Intergenic 5b 49350 CEU:1.0;0.913 FUNCTIONAL_SNP rs17479186 chr5 87793931 Intergenic 6 53655 CEU:1.0;0.913 FUNCTIONAL_SNP rs17419695 chr5 87790079 Intergenic 6 57507 CEU:1.0;0.913 FUNCTIONAL_SNP rs10491448 chr5 87803996 Intergenic 6 43590 CEU:1.0;0.913, CHB:1.0;1.0 FUNCTIONAL_SNP rs16903226 chr5 87822806 Intergenic 6 24780 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16903228 chr5 87828459 Intergenic 6 19127 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2067920 chr5 87783736 Intergenic 6 63850 CEU:1.0;0.913 FUNCTIONAL_SNP rs17421410 chr5 87836307 Intergenic 6 11279 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16903196 chr5 87801670 Intergenic 7 45916 CEU:1.0;0.913, CHB:1.0;1.0 FUNCTIONAL_SNP rs17479088 chr5 87790281 Intergenic 7 57305 CEU:1.0;0.913 FUNCTIONAL_SNP rs17478824 chr5 87785624 Intergenic 7 61962 CEU:1.0;0.907 FUNCTIONAL_SNP rs16903216 chr5 87816372 Intergenic 7 31214 CEU:1.0;1.0 FUNCTIONAL_SNP rs16903218 chr5 87820529 Intergenic 7 27057 CEU:1.0;1.0 FUNCTIONAL_SNP rs16903220 chr5 87820740 Intergenic 7 26846 CEU:1.0;1.0 FUNCTIONAL_SNP rs10491447 chr5 87789028 Intergenic 7 58558 CEU:1.0;0.907 FUNCTIONAL_SNP rs16903225 chr5 87822786 Intergenic 7 24800 CEU:1.0;1.0 FUNCTIONAL_SNP rs17419709 chr5 87790192 Intergenic 7 57394 CEU:1.0;0.913 FUNCTIONAL_SNP rs16903232 chr5 87831734 Intergenic 7 15852 CEU:1.0;1.0 FUNCTIONAL_SNP rs16903234 chr5 87833801 Intergenic 7 13785 CEU:1.0;1.0 FUNCTIONAL_SNP rs2067918 chr5 87783687 Intergenic 7 63899 CEU:1.0;0.907 FUNCTIONAL_SNP rs17479641 chr5 87803797 Intergenic 7 43789 CEU:1.0;0.913, CHB:1.0;1.0 FUNCTIONAL_SNP rs12654053 chr5 87792484 Intergenic 7 55102 CEU:1.0;0.907 FUNCTIONAL_SNP rs2194026 chr5 87801273 Intergenic 7 46313 CEU:1.0;0.907 FUNCTIONAL_SNP rs17480689 chr5 87834883 Intergenic 7 12703 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1035387 chr5 87813614 Intergenic 7 33972 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs770189 chr5 88088439 Intron 5b ASSOCIATION 17903302 Tonometry 5.52287874528 MEF2C FUNCTIONAL_SNP rs13166883 chr5 88074529 Intron 5b 13910 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs700593 chr5 88101150 Intron 5b 12711 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs6870660 chr5 88086124 Intron 6 2315 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10942537 chr5 88077448 Intron 6 10991 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.92 FUNCTIONAL_SNP rs244755 chr5 88095785 Intron 7 7346 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs244756 chr5 88098064 Intron 7 9625 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs244757 chr5 88098120 Intron 7 9681 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.9, YRI:0.952;0.867 LEAD_SNP rs10037512 chr5 88354675 Intergenic 7 ASSOCIATION 20881960 Height 17.6989700043 MEF2C - CETN3 FUNCTIONAL_SNP rs6898643 chr5 88351067 Intergenic 3a 3608 CEU:1.0;0.804, CHB:1.0;0.655, JPT:1.0;0.697 FUNCTIONAL_SNP rs4916669 chr5 88393124 Intergenic 4 38449 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs6865194 chr5 88331749 Intergenic 5a 22926 CEU:1.0;0.817, CHB:1.0;0.543, JPT:1.0;0.585 FUNCTIONAL_SNP rs4916667 chr5 88365778 Intergenic 5a 11103 CEU:1.0;0.814, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs4916744 chr5 88332144 Intergenic 5b 22531 CEU:1.0;0.821, CHB:1.0;0.543, JPT:1.0;0.585 FUNCTIONAL_SNP rs10070540 chr5 88401770 Intergenic 5b 47095 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.702 FUNCTIONAL_SNP rs1346452 chr5 88387127 Intergenic 5b 32452 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs6860105 chr5 88348122 Intergenic 5b 6553 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708, YRI:1.0;0.534 FUNCTIONAL_SNP rs4916663 chr5 88302330 Intergenic 5b 52345 CEU:1.0;0.821 FUNCTIONAL_SNP rs1366595 chr5 88341173 Intergenic 5b 13502 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs715342 chr5 88340769 Intergenic 5b 13906 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs10942545 chr5 88337272 Intergenic 5b 17403 CEU:1.0;0.813, CHB:1.0;0.648, JPT:1.0;0.731 FUNCTIONAL_SNP rs13154117 chr5 88297500 Intergenic 5b 57175 CEU:1.0;0.821, JPT:1.0;0.529, YRI:0.739;0.546 FUNCTIONAL_SNP rs11958875 chr5 88300117 Intergenic 5b 54558 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs1427968 chr5 88344778 Intergenic 6 9897 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.702 FUNCTIONAL_SNP rs4916741 chr5 88313158 Intergenic 6 41517 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs4916742 chr5 88318058 Intergenic 6 36617 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs4916738 chr5 88297792 Intergenic 6 56883 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs7715079 chr5 88359704 Intergenic 6 5029 CEU:1.0;0.817, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs4916666 chr5 88332380 Intergenic 6 22295 CEU:1.0;0.821, CHB:1.0;0.543, JPT:1.0;0.585 FUNCTIONAL_SNP rs4020801 chr5 88402973 Intergenic 6 48298 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs6885600 chr5 88347729 Intergenic 6 6946 CEU:1.0;0.84, CHB:1.0;0.623, JPT:1.0;0.737 FUNCTIONAL_SNP rs11957803 chr5 88346367 Intergenic 6 8308 CEU:1.0;0.811, CHB:1.0;0.64, JPT:1.0;0.708, YRI:1.0;0.534 FUNCTIONAL_SNP rs10069604 chr5 88392641 Intergenic 6 37966 CEU:1.0;0.804, CHB:1.0;0.641, JPT:1.0;0.69 FUNCTIONAL_SNP rs1159665 chr5 88334952 Intergenic 6 19723 CEU:1.0;0.817, CHB:1.0;0.648, JPT:1.0;0.737 FUNCTIONAL_SNP rs1427965 chr5 88325307 Intergenic 6 29368 CEU:1.0;0.821, CHB:1.0;0.543, JPT:1.0;0.585, YRI:1.0;0.825 FUNCTIONAL_SNP rs1427969 chr5 88344918 Intergenic 7 9757 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.643 FUNCTIONAL_SNP rs4916747 chr5 88357473 Intergenic 7 2798 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.704 FUNCTIONAL_SNP rs919184 chr5 88283736 Intergenic 7 70939 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs919185 chr5 88388207 Intergenic 7 33532 CEU:1.0;0.839, CHB:1.0;0.655, JPT:1.0;0.707 FUNCTIONAL_SNP rs6452803 chr5 88307285 Intergenic 7 47390 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs17562941 chr5 88332690 Intergenic 7 21985 CEU:1.0;0.821, CHB:1.0;0.543, JPT:1.0;0.585 FUNCTIONAL_SNP rs13185032 chr5 88329164 Intergenic 7 25511 CEU:1.0;0.821, CHB:1.0;0.543, JPT:1.0;0.585 FUNCTIONAL_SNP rs7721818 chr5 88394669 Intergenic 7 39994 CEU:1.0;0.821, CHB:1.0;0.641, JPT:1.0;0.708 FUNCTIONAL_SNP rs3850654 chr5 88370560 Intergenic 7 15885 CEU:1.0;0.817, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs13436401 chr5 88338622 Intergenic 7 16053 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708, YRI:1.0;0.825 FUNCTIONAL_SNP rs11952355 chr5 88299985 Intergenic 7 54690 CEU:1.0;0.821, JPT:1.0;0.512 FUNCTIONAL_SNP rs7728690 chr5 88411214 Intergenic 7 56539 CEU:1.0;0.821, JPT:0.775;0.544 FUNCTIONAL_SNP rs13177933 chr5 88282553 Intergenic 7 72122 CEU:1.0;0.812, JPT:1.0;0.532 FUNCTIONAL_SNP rs7725469 chr5 88340667 Intergenic 7 14008 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708, YRI:1.0;0.825 FUNCTIONAL_SNP rs871218 chr5 88310142 Intergenic 7 44533 CEU:1.0;0.817, JPT:1.0;0.532 FUNCTIONAL_SNP rs957629 chr5 88291424 Intergenic 7 63251 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs1366594 chr5 88376061 Intergenic 7 21386 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9293509 chr5 88374227 Intergenic 7 19552 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs6452806 chr5 88319907 Intergenic 7 34768 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs9293511 chr5 88416354 Intergenic 7 61679 CEU:1.0;0.821, JPT:0.775;0.544 FUNCTIONAL_SNP rs6452809 chr5 88331965 Intergenic 7 22710 CEU:1.0;0.821, CHB:1.0;0.535, JPT:1.0;0.585 FUNCTIONAL_SNP rs984399 chr5 88381894 Intergenic 7 27219 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs6894139 chr5 88327782 Intergenic 7 26893 CEU:1.0;1.0, CHB:1.0;0.827, JPT:1.0;0.819 FUNCTIONAL_SNP rs6876387 chr5 88305813 Intergenic 7 48862 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs6871386 chr5 88327207 Intergenic 7 27468 CEU:1.0;0.817, CHB:1.0;0.562, JPT:1.0;0.571 FUNCTIONAL_SNP rs10942544 chr5 88337110 Intergenic 7 17565 CEU:1.0;0.817, CHB:1.0;0.643, JPT:1.0;0.708 FUNCTIONAL_SNP rs10040039 chr5 88354597 Intergenic 7 78 CEU:1.0;0.815, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs9986241 chr5 88374038 Intergenic 7 19363 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs12660032 chr5 88390545 Intergenic 7 35870 CEU:1.0;0.817, CHB:1.0;0.648, JPT:1.0;0.704 FUNCTIONAL_SNP rs1159666 chr5 88334993 Intergenic 7 19682 CEU:1.0;0.821, CHB:1.0;0.655, JPT:1.0;0.708 FUNCTIONAL_SNP rs4916735 chr5 88284185 Intergenic 7 70490 CEU:1.0;0.813, JPT:1.0;0.538 FUNCTIONAL_SNP rs1366142 chr5 88380316 Intergenic 7 25641 CEU:1.0;0.8, CHB:1.0;0.675, JPT:1.0;0.665 FUNCTIONAL_SNP rs1427967 chr5 88328566 Intergenic 7 26109 CEU:1.0;0.821, CHB:1.0;0.543, JPT:1.0;0.585 LEAD_SNP rs1366594 chr5 88376061 Intergenic 7 ASSOCIATION 21533022 Bone mineral density 9.09691001301 MEF2C - CETN3 ASSOCIATION 21533022 Bone mineral density 7.0 MEF2C - CETN3 ASSOCIATION 19801982 Bone mineral density (hip) 13.0 MEF2C - CETN3 FUNCTIONAL_SNP rs6898643 chr5 88351067 Intergenic 3a 24994 CEU:1.0;0.804, CHB:1.0;0.594, JPT:1.0;0.697 FUNCTIONAL_SNP rs4916669 chr5 88393124 Intergenic 4 17063 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs6865194 chr5 88331749 Intergenic 5a 44312 CEU:1.0;0.817, JPT:1.0;0.585 FUNCTIONAL_SNP rs4916667 chr5 88365778 Intergenic 5a 10283 CEU:1.0;0.814, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs4916744 chr5 88332144 Intergenic 5b 43917 CEU:1.0;0.821, JPT:1.0;0.585 FUNCTIONAL_SNP rs10070540 chr5 88401770 Intergenic 5b 25709 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.702 FUNCTIONAL_SNP rs1346452 chr5 88387127 Intergenic 5b 11066 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs6860105 chr5 88348122 Intergenic 5b 27939 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708, YRI:1.0;0.534 FUNCTIONAL_SNP rs4916663 chr5 88302330 Intergenic 5b 73731 CEU:1.0;0.821 FUNCTIONAL_SNP rs1366595 chr5 88341173 Intergenic 5b 34888 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs715342 chr5 88340769 Intergenic 5b 35292 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs10942545 chr5 88337272 Intergenic 5b 38789 CEU:1.0;0.813, CHB:1.0;0.587, JPT:1.0;0.731 FUNCTIONAL_SNP rs13154117 chr5 88297500 Intergenic 5b 78561 CEU:1.0;0.821, JPT:1.0;0.529, YRI:0.739;0.546 FUNCTIONAL_SNP rs11958875 chr5 88300117 Intergenic 5b 75944 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs1427968 chr5 88344778 Intergenic 6 31283 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.702 FUNCTIONAL_SNP rs4916741 chr5 88313158 Intergenic 6 62903 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs4916742 chr5 88318058 Intergenic 6 58003 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs4916738 chr5 88297792 Intergenic 6 78269 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs7715079 chr5 88359704 Intergenic 6 16357 CEU:1.0;0.817, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs4916666 chr5 88332380 Intergenic 6 43681 CEU:1.0;0.821, JPT:1.0;0.585 FUNCTIONAL_SNP rs4020801 chr5 88402973 Intergenic 6 26912 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs6885600 chr5 88347729 Intergenic 6 28332 CEU:1.0;0.84, CHB:1.0;0.557, JPT:1.0;0.737 FUNCTIONAL_SNP rs11957803 chr5 88346367 Intergenic 6 29694 CEU:1.0;0.811, CHB:1.0;0.577, JPT:1.0;0.708, YRI:1.0;0.534 FUNCTIONAL_SNP rs10069604 chr5 88392641 Intergenic 6 16580 CEU:1.0;0.804, CHB:1.0;0.579, JPT:1.0;0.69 FUNCTIONAL_SNP rs1159665 chr5 88334952 Intergenic 6 41109 CEU:1.0;0.817, CHB:1.0;0.587, JPT:1.0;0.737 FUNCTIONAL_SNP rs1427965 chr5 88325307 Intergenic 6 50754 CEU:1.0;0.821, JPT:1.0;0.585, YRI:1.0;0.825 FUNCTIONAL_SNP rs1427969 chr5 88344918 Intergenic 7 31143 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.643 FUNCTIONAL_SNP rs4916747 chr5 88357473 Intergenic 7 18588 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.704 FUNCTIONAL_SNP rs919184 chr5 88283736 Intergenic 7 92325 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs919185 chr5 88388207 Intergenic 7 12146 CEU:1.0;0.839, CHB:1.0;0.587, JPT:1.0;0.707 FUNCTIONAL_SNP rs6452803 chr5 88307285 Intergenic 7 68776 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs17562941 chr5 88332690 Intergenic 7 43371 CEU:1.0;0.821, JPT:1.0;0.585 FUNCTIONAL_SNP rs7721818 chr5 88394669 Intergenic 7 18608 CEU:1.0;0.821, CHB:1.0;0.579, JPT:1.0;0.708 FUNCTIONAL_SNP rs3850654 chr5 88370560 Intergenic 7 5501 CEU:1.0;0.817, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs13436401 chr5 88338622 Intergenic 7 37439 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708, YRI:1.0;0.825 FUNCTIONAL_SNP rs11952355 chr5 88299985 Intergenic 7 76076 CEU:1.0;0.821, JPT:1.0;0.512 FUNCTIONAL_SNP rs7728690 chr5 88411214 Intergenic 7 35153 CEU:1.0;0.821, JPT:0.775;0.544 FUNCTIONAL_SNP rs13177933 chr5 88282553 Intergenic 7 93508 CEU:1.0;0.812, JPT:1.0;0.532 FUNCTIONAL_SNP rs7725469 chr5 88340667 Intergenic 7 35394 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708, YRI:1.0;0.825 FUNCTIONAL_SNP rs871218 chr5 88310142 Intergenic 7 65919 CEU:1.0;0.817, JPT:1.0;0.532 FUNCTIONAL_SNP rs10037512 chr5 88354675 Intergenic 7 21386 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs957629 chr5 88291424 Intergenic 7 84637 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs9293509 chr5 88374227 Intergenic 7 1834 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs6452806 chr5 88319907 Intergenic 7 56154 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs9293511 chr5 88416354 Intergenic 7 40293 CEU:1.0;0.821, JPT:0.775;0.544 FUNCTIONAL_SNP rs6452809 chr5 88331965 Intergenic 7 44096 CEU:1.0;0.821, JPT:1.0;0.585 FUNCTIONAL_SNP rs984399 chr5 88381894 Intergenic 7 5833 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs6894139 chr5 88327782 Intergenic 7 48279 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.819 FUNCTIONAL_SNP rs6876387 chr5 88305813 Intergenic 7 70248 CEU:1.0;0.821, JPT:1.0;0.532 FUNCTIONAL_SNP rs6871386 chr5 88327207 Intergenic 7 48854 CEU:1.0;0.817, CHB:1.0;0.508, JPT:1.0;0.571 FUNCTIONAL_SNP rs10942544 chr5 88337110 Intergenic 7 38951 CEU:1.0;0.817, CHB:1.0;0.582, JPT:1.0;0.708 FUNCTIONAL_SNP rs10040039 chr5 88354597 Intergenic 7 21464 CEU:1.0;0.815, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs9986241 chr5 88374038 Intergenic 7 2023 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs12660032 chr5 88390545 Intergenic 7 14484 CEU:1.0;0.817, CHB:1.0;0.587, JPT:1.0;0.704 FUNCTIONAL_SNP rs1159666 chr5 88334993 Intergenic 7 41068 CEU:1.0;0.821, CHB:1.0;0.594, JPT:1.0;0.708 FUNCTIONAL_SNP rs13185032 chr5 88329164 Intergenic 7 46897 CEU:1.0;0.821, JPT:1.0;0.585 FUNCTIONAL_SNP rs4916735 chr5 88284185 Intergenic 7 91876 CEU:1.0;0.813, JPT:1.0;0.538 FUNCTIONAL_SNP rs1366142 chr5 88380316 Intergenic 7 4255 CEU:1.0;0.8, CHB:1.0;0.61, JPT:1.0;0.665 FUNCTIONAL_SNP rs1427967 chr5 88328566 Intergenic 7 47495 CEU:1.0;0.821, JPT:1.0;0.585 LEAD_SNP rs12518099 chr5 89546109 Intron 7 ASSOCIATION 19734900 Type 2 diabetes and other traits 6.15490195999 MEF2C - CETN3 FUNCTIONAL_SNP rs16868385 chr5 89554112 Intron 7 8003 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1967256 chr5 90299223 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 7.52287874528 GPR98 FUNCTIONAL_SNP rs11948953 chr5 90303530 Intron 6 4307 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16869333 chr5 90301764 Intron 6 2541 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11952452 chr5 90303764 Intron 7 4541 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16869335 chr5 90301862 Intron 7 2639 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16869328 chr5 90300468 Intron 7 1245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16869330 chr5 90301599 Intron 7 2376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11954387 chr5 90302117 Intron 7 2894 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1967254 chr5 90297574 Intron 7 1649 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1967255 chr5 90299069 Intron 7 154 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16869336 chr5 90301924 Intron 7 2701 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12521660 chr5 90299817 Intron 7 594 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16869331 chr5 90301692 Intron 7 2469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1967253 chr5 90297516 Intron 7 1707 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.509 LEAD_SNP rs10514345 chr5 90424279 Intron 5b ASSOCIATION 17903296 Hip geometry 6.69897000434 GPR98 LEAD_SNP rs933688 chr5 90762748 Intergenic 5b ASSOCIATION 19247474 Smoking behavior 5.22184874962 ARRDC3 - PCBP2P3 FUNCTIONAL_SNP rs12188467 chr5 90765632 Intergenic 4 2884 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.942 FUNCTIONAL_SNP rs186717 chr5 90780467 Intergenic 6 17719 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs332544 chr5 90778848 Intergenic 7 16100 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6867091 chr5 90734333 Intergenic 7 28415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.939;0.881 FUNCTIONAL_SNP rs2059207 chr5 90731931 Intergenic 7 30817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.939;0.881 LEAD_SNP rs4869419 chr5 92567539 Intergenic 6 ASSOCIATION 21273288 Natriuretic peptide levels 5.39794000867 CCT7P2 - FLJ42709 FUNCTIONAL_SNP rs4380635 chr5 92567901 Intergenic 7 362 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.877 LEAD_SNP rs17376456 chr5 93557702 Intron 5b ASSOCIATION 21310492 Diabetic retinopathy 14.5228787453 C5orf36 LEAD_SNP rs17418283 chr5 94154588 Intron 5b ASSOCIATION 19416921 Bipolar disorder 7.0 MCTP1 LEAD_SNP rs27524 chr5 96101944 Intron 7 ASSOCIATION 20953190 Psoriasis 10.5228787453 CAST;ERAP1 LEAD_SNP rs13160562 chr5 96111371 Exon,non-coding 6 ASSOCIATION 19581569 Alcohol dependence 5.15490195999 ERAP1 FUNCTIONAL_SNP rs7063 chr5 96110211 Exon,non-coding 6 1160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1057569 chr5 96109610 Exon,non-coding 6 1761 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1065407 chr5 96112083 Exon,non-coding 7 712 CEU:1.0;0.81, CHB:1.0;0.602, JPT:1.0;0.846, YRI:1.0;0.784 FUNCTIONAL_SNP rs731827 chr5 96087015 Intron 5a 24356 CEU:1.0;0.88, CHB:0.779;0.5 FUNCTIONAL_SNP rs7356594 chr5 96096189 Intron 6 15182 CEU:1.0;0.88, CHB:0.779;0.5, JPT:1.0;0.6, YRI:0.777;0.543 FUNCTIONAL_SNP rs1862609 chr5 96086690 Intron 6 24681 CEU:1.0;0.844, CHB:0.779;0.5, YRI:0.777;0.543 FUNCTIONAL_SNP rs10037212 chr5 96084776 Intron 6 26595 CEU:1.0;0.844, CHB:0.779;0.5, YRI:0.877;0.686 FUNCTIONAL_SNP rs7705827 chr5 96082433 Intron 6 28938 CEU:1.0;0.844, CHB:0.779;0.5, YRI:0.877;0.686 FUNCTIONAL_SNP rs17401719 chr5 96089046 Intron 6 22325 CEU:1.0;0.88, CHB:0.779;0.5, JPT:1.0;0.641, YRI:0.776;0.542 LEAD_SNP rs30187 chr5 96124330 Coding 5b ASSOCIATION 21743469 Ankylosing spondylitis 26.6989700043 ERAP1 FUNCTIONAL_SNP rs27529 chr5 96126308 Coding 6 1978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs26510 chr5 96125910 Intron 5b 1580 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs27710 chr5 96126197 Intron 5b 1867 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs246453 chr5 96123336 Intron 6 994 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs30378 chr5 96121994 Intron 7 2336 CEU:0.945;0.893, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs30379 chr5 96122260 Intron 7 2070 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs30380 chr5 96122281 Intron 7 2049 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.962 FUNCTIONAL_SNP rs469758 chr5 96121715 Intron 7 2615 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs27434 chr5 96129512 Coding 7 ASSOCIATION 20062062 Ankylosing spondylitis 11.3010299957 ERAP1 FUNCTIONAL_SNP rs27527 chr5 96151968 Intron 5a 22456 CEU:1.0;0.832 FUNCTIONAL_SNP rs151940 chr5 96147777 Intergenic 5b 18265 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.76;0.536 FUNCTIONAL_SNP rs152280 chr5 96161942 Intron 5b 32430 CEU:1.0;0.877, CHB:1.0;0.907, JPT:1.0;0.864 FUNCTIONAL_SNP rs30186 chr5 96124447 Intron 5b 5065 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs26498 chr5 96138812 Intron 6 9300 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs27045 chr5 96138861 Intron 6 9349 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs26496 chr5 96137882 Intron 7 8370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs28119 chr5 96131733 Intron 7 2221 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.714 FUNCTIONAL_SNP rs26491 chr5 96134113 Intron 7 4601 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.73 FUNCTIONAL_SNP rs26495 chr5 96137840 Intron 7 8328 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2549794 chr5 96244549 Intron 5a ASSOCIATION 21102463 Crohn's disease 10.0 ERAP2 FUNCTIONAL_SNP rs27711 chr5 96345739 Exon,non-coding 5a 101190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.914;0.802 FUNCTIONAL_SNP rs39602 chr5 96364454 Exon,non-coding 6 119905 CEU:1.0;0.889, CHB:1.0;0.687, JPT:1.0;0.645, YRI:0.899;0.543 FUNCTIONAL_SNP rs2762 chr5 96273298 Exon,non-coding 3a 28749 CEU:1.0;0.811, CHB:1.0;0.684, JPT:1.0;0.638, YRI:0.899;0.563 FUNCTIONAL_SNP rs9127 chr5 96372165 Exon,non-coding 7 127616 CEU:1.0;0.922, CHB:1.0;0.687, JPT:1.0;0.754 FUNCTIONAL_SNP rs1363974 chr5 96293816 Intron 2b 49267 CEU:1.0;0.889, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.903;0.612 FUNCTIONAL_SNP rs2351010 chr5 96293929 Intron 2b 49380 CEU:1.0;0.889, CHB:1.0;0.645, JPT:1.0;0.679, YRI:0.905;0.619 FUNCTIONAL_SNP rs11135484 chr5 96221889 Intron 2b 22660 CEU:1.0;0.855, YRI:1.0;0.603 FUNCTIONAL_SNP rs27993 chr5 96355603 Intron 3a 111054 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.91;0.794 FUNCTIONAL_SNP rs4869314 chr5 96229225 Intron 4 15324 CEU:1.0;0.855, CHB:1.0;0.503 FUNCTIONAL_SNP rs13167902 chr5 96222020 Intron 4 22529 CEU:1.0;0.855, CHB:1.0;0.556, JPT:1.0;0.575, YRI:1.0;0.599 FUNCTIONAL_SNP rs4360063 chr5 96293153 Intron 4 48604 CEU:1.0;0.885, CHB:1.0;0.677, JPT:1.0;0.707, YRI:0.897;0.577 FUNCTIONAL_SNP rs1423357 chr5 96298758 Intron 4 54209 CEU:1.0;0.889, CHB:1.0;0.613, JPT:1.0;0.645, YRI:0.903;0.612 FUNCTIONAL_SNP rs1544777 chr5 96314230 Intron 5a 69681 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.918 FUNCTIONAL_SNP rs2617447 chr5 96267655 Intron 5a 23106 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs38034 chr5 96322419 Intron 5a 77870 CEU:1.0;0.855, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.898;0.523 FUNCTIONAL_SNP rs27306 chr5 96334558 Intron 5a 90009 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.914;0.802 FUNCTIONAL_SNP rs27302 chr5 96373750 Intergenic 5b 129201 CEU:1.0;0.889, CHB:1.0;0.687, JPT:1.0;0.679 FUNCTIONAL_SNP rs2548530 chr5 96239927 Intron 5b 4622 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10051637 chr5 96279490 Intron 5b 34941 CEU:1.0;0.889, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.905;0.619 FUNCTIONAL_SNP rs7716222 chr5 96293006 Intron 5b 48457 CEU:1.0;0.889, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.905;0.619 FUNCTIONAL_SNP rs7731592 chr5 96288960 Intron 5b 44411 CEU:1.0;0.887, CHB:1.0;0.687, JPT:1.0;0.676, YRI:0.905;0.619 FUNCTIONAL_SNP rs2247650 chr5 96229750 Intron 5b 14799 CEU:1.0;0.822, CHB:1.0;0.513, JPT:1.0;0.503, YRI:1.0;0.674 FUNCTIONAL_SNP rs27712 chr5 96364063 Intron 6 119514 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1974871 chr5 96226535 Intron 6 18014 CEU:1.0;0.889, YRI:1.0;0.884 FUNCTIONAL_SNP rs6871162 chr5 96281662 Intron 6 37113 CEU:1.0;0.889, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.905;0.619 FUNCTIONAL_SNP rs3849749 chr5 96234533 Intron 6 10016 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2278018 chr5 96224579 Intron 6 19970 CEU:1.0;0.852, CHB:1.0;0.508, YRI:1.0;0.603 FUNCTIONAL_SNP rs2278019 chr5 96225252 Intron 6 19297 CEU:1.0;0.855, YRI:1.0;0.603 FUNCTIONAL_SNP rs10434709 chr5 96225774 Intron 6 18775 CEU:1.0;0.855, YRI:1.0;0.603 FUNCTIONAL_SNP rs27290 chr5 96350088 Intron 6 105539 CEU:1.0;0.889, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.9;0.547 FUNCTIONAL_SNP rs27300 chr5 96363407 Intron 6 118858 CEU:1.0;0.889, CHB:1.0;0.687, JPT:1.0;0.645, YRI:0.9;0.547 FUNCTIONAL_SNP rs27307 chr5 96338505 Intron 6 93956 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10058476 chr5 96297527 Intron 6 52978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.912 FUNCTIONAL_SNP rs27436 chr5 96330966 Intron 6 86417 CEU:1.0;0.849, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.9;0.547 FUNCTIONAL_SNP rs6556942 chr5 96226196 Intron 6 18353 CEU:1.0;0.96, CHB:1.0;0.769, JPT:1.0;0.941, YRI:1.0;0.958 FUNCTIONAL_SNP rs7719705 chr5 96286286 Intron 6 41737 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs3797796 chr5 96316758 Intron 6 72209 CEU:1.0;0.96, CHB:1.0;0.943, JPT:1.0;0.934, YRI:0.912;0.831 FUNCTIONAL_SNP rs2548532 chr5 96238578 Intron 6 5971 CEU:1.0;0.959, YRI:1.0;0.654 FUNCTIONAL_SNP rs3909451 chr5 96295121 Intron 6 50572 CEU:1.0;0.889, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.905;0.619 FUNCTIONAL_SNP rs12516666 chr5 96228782 Intron 6 15767 CEU:1.0;0.855, YRI:1.0;0.697 FUNCTIONAL_SNP rs38042 chr5 96335350 Intron 6 90801 CEU:1.0;0.822, CHB:1.0;0.622, JPT:1.0;0.583 FUNCTIONAL_SNP rs10044354 chr5 96320495 Intron 6 75946 CEU:1.0;0.889, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.9;0.547 FUNCTIONAL_SNP rs1363907 chr5 96252803 Intron 6 8254 CEU:1.0;0.961, CHB:1.0;0.841, JPT:1.0;0.94, YRI:1.0;0.957 FUNCTIONAL_SNP rs27659 chr5 96343552 Intron 7 99003 CEU:1.0;0.887, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.899;0.545 FUNCTIONAL_SNP rs2549783 chr5 96231372 Intron 7 13177 CEU:1.0;1.0, CHB:1.0;0.759, JPT:1.0;0.794, YRI:1.0;1.0 FUNCTIONAL_SNP rs716848 chr5 96265000 Intron 7 20451 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.918 FUNCTIONAL_SNP rs38032 chr5 96321887 Intron 7 77338 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.914;0.802 FUNCTIONAL_SNP rs38033 chr5 96322136 Intron 7 77587 CEU:1.0;0.889, CHB:1.0;0.704, JPT:1.0;0.67 FUNCTIONAL_SNP rs38043 chr5 96336791 Intron 7 92242 CEU:1.0;0.889, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.904;0.594 FUNCTIONAL_SNP rs1477364 chr5 96284892 Intron 7 40343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1559355 chr5 96226695 Intron 7 17854 CEU:1.0;0.855, YRI:1.0;0.603 FUNCTIONAL_SNP rs2161548 chr5 96318145 Intron 7 73596 CEU:1.0;0.887, CHB:1.0;0.687, JPT:1.0;0.679, YRI:0.905;0.619 FUNCTIONAL_SNP rs251339 chr5 96235038 Intron 7 9511 CEU:1.0;0.822, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;1.0 FUNCTIONAL_SNP rs2927609 chr5 96252079 Intron 7 7530 CEU:1.0;1.0, CHB:0.94;0.883, JPT:1.0;1.0 FUNCTIONAL_SNP rs2910686 chr5 96252589 Intron 7 8040 CEU:1.0;0.857, CHB:1.0;0.503, JPT:1.0;0.536, YRI:1.0;0.653 FUNCTIONAL_SNP rs3734015 chr5 96228428 Intron 7 16121 CEU:1.0;0.855, YRI:1.0;0.603 LEAD_SNP rs4703129 chr5 97888736 Intergenic 7 ASSOCIATION 21182207 Asperger disorder 6.0 MRPS35P2 - DDX18P4 LEAD_SNP rs1829883 chr5 98781103 Intergenic 6 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.22184874962 RPS9P3 - FAM174A FUNCTIONAL_SNP rs1916599 chr5 98774240 Intergenic 5a 6863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs2511973 chr5 98807871 Intergenic 6 26768 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.841 FUNCTIONAL_SNP rs1523381 chr5 98773754 Intergenic 6 7349 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs2461991 chr5 98793332 Intergenic 6 12229 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2461974 chr5 98844337 Intergenic 7 63234 CEU:1.0;0.917, CHB:1.0;0.91, JPT:1.0;0.815, YRI:1.0;0.807 LEAD_SNP rs10067427 chr5 99342047 Intergenic 6 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 5.30102999566 RPS9P3 - FAM174A FUNCTIONAL_SNP rs10515295 chr5 99387360 Intergenic 5b 45313 CEU:1.0;0.808, CHB:1.0;0.623, JPT:0.927;0.644, YRI:0.946;0.709 FUNCTIONAL_SNP rs1600033 chr5 99342755 Intergenic 6 708 CEU:1.0;0.862 FUNCTIONAL_SNP rs1542521 chr5 99344583 Intergenic 6 2536 CEU:0.956;0.84, YRI:1.0;0.747 FUNCTIONAL_SNP rs7710112 chr5 99339022 Intergenic 6 3025 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.793 FUNCTIONAL_SNP rs1477668 chr5 99335840 Intergenic 7 6207 CEU:1.0;0.881, YRI:1.0;0.917 FUNCTIONAL_SNP rs1542520 chr5 99348386 Intergenic 7 6339 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.793 FUNCTIONAL_SNP rs10057187 chr5 99346521 Intergenic 7 4474 CEU:1.0;0.881, YRI:1.0;0.747 FUNCTIONAL_SNP rs10040317 chr5 99345759 Intergenic 7 3712 CEU:1.0;0.881, YRI:1.0;0.736 LEAD_SNP rs4702982 chr5 99991648 Intron 6 ASSOCIATION 19165232 Panic disorder 5.22184874962 FAM174A - ST8SIA4 LEAD_SNP rs13188771 chr5 100948545 Intergenic 7 ASSOCIATION 18846501 Conduct disorder (interaction) 5.69897000434 ST8SIA4 - OR7H2P LEAD_SNP rs1502844 chr5 101859317 Intergenic 5b ASSOCIATION 19571808 Schizophrenia 6.0 SLCO6A1 - PAM FUNCTIONAL_SNP rs10063454 chr5 101841169 Exon,non-coding 6 18148 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.881 FUNCTIONAL_SNP rs1584716 chr5 101682384 Intergenic 5b 176933 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs1875634 chr5 101817358 Intron 5b 41959 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs7724496 chr5 101661468 Intergenic 5b 197849 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs1901522 chr5 101743626 Intron 5b 115691 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs11242471 chr5 101831625 Intron 5b 27692 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.867 FUNCTIONAL_SNP rs7733253 chr5 101725769 Intron 6 133548 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.895, YRI:1.0;0.838 FUNCTIONAL_SNP rs2400797 chr5 101781177 Intron 6 78140 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs1452062 chr5 101727677 Intron 6 131640 CEU:1.0;0.922, CHB:1.0;0.951, JPT:1.0;0.857, YRI:1.0;0.627 FUNCTIONAL_SNP rs10055753 chr5 101707342 Intergenic 6 151975 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs1584717 chr5 101671415 Intergenic 6 187902 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs6895200 chr5 101726463 Intron 6 132854 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.603 FUNCTIONAL_SNP rs7721084 chr5 101736336 Intron 6 122981 CEU:0.953;0.907, CHB:0.951;0.905, JPT:0.931;0.727, YRI:0.934;0.73 FUNCTIONAL_SNP rs6873738 chr5 101717372 Intron 6 141945 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.603 FUNCTIONAL_SNP rs10038809 chr5 101807349 Intron 6 51968 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.838 FUNCTIONAL_SNP rs1542296 chr5 101755430 Intron 6 103887 CEU:1.0;1.0, CHB:1.0;0.866, JPT:1.0;0.867, YRI:1.0;0.848 FUNCTIONAL_SNP rs10479216 chr5 101752461 Intron 6 106856 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.864, YRI:1.0;0.844 FUNCTIONAL_SNP rs2400798 chr5 101788155 Intron 6 71162 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs10075318 chr5 101701924 Intergenic 6 157393 CEU:1.0;0.888, CHB:1.0;0.953, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs9327843 chr5 101697899 Intergenic 6 161418 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.844 FUNCTIONAL_SNP rs7718122 chr5 101700702 Intergenic 6 158615 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs9327860 chr5 101808672 Intron 6 50645 CEU:1.0;0.886, CHB:1.0;0.951, JPT:1.0;0.867, YRI:1.0;0.837 FUNCTIONAL_SNP rs1545487 chr5 101729829 Intron 6 129488 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs1597766 chr5 101703576 Intergenic 6 155741 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs6866255 chr5 101816327 Intron 6 42990 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.85, YRI:1.0;1.0 FUNCTIONAL_SNP rs1562960 chr5 101729504 Intron 6 129813 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs6596459 chr5 101664587 Intergenic 6 194730 CEU:1.0;0.883, CHB:1.0;0.954, JPT:1.0;0.867 FUNCTIONAL_SNP rs10055023 chr5 101762909 Intron 6 96408 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs7737204 chr5 101733177 Intron 6 126140 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.853, YRI:0.947;0.776 FUNCTIONAL_SNP rs2123133 chr5 101771645 Intron 6 87672 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs6596493 chr5 101775720 Intron 6 83597 CEU:1.0;1.0, CHB:1.0;0.954, JPT:0.948;0.817, YRI:1.0;0.817 FUNCTIONAL_SNP rs6596495 chr5 101777273 Intron 6 82044 CEU:1.0;0.888, CHB:1.0;0.909, JPT:1.0;0.853 FUNCTIONAL_SNP rs7715217 chr5 101711942 Intron 6 147375 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.857, YRI:1.0;0.87 FUNCTIONAL_SNP rs6871966 chr5 101776298 Intron 6 83019 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.867 FUNCTIONAL_SNP rs1901518 chr5 101667514 Intergenic 6 191803 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs1901521 chr5 101746708 Intron 6 112609 CEU:0.958;0.848, CHB:1.0;0.869, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs10057126 chr5 101742584 Intron 6 116733 CEU:1.0;0.954, YRI:0.943;0.762 FUNCTIONAL_SNP rs10041806 chr5 101713291 Intron 6 146026 CEU:1.0;1.0, CHB:1.0;0.949, JPT:0.929;0.761, YRI:1.0;0.77 FUNCTIONAL_SNP rs4703226 chr5 101739809 Intron 6 119508 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs4703232 chr5 101811346 Intron 7 47971 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.846 FUNCTIONAL_SNP rs1452057 chr5 101789305 Intron 7 70012 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.907, YRI:1.0;0.85 FUNCTIONAL_SNP rs6877722 chr5 101709936 Intron 7 149381 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.848 FUNCTIONAL_SNP rs2400795 chr5 101775339 Intron 7 83978 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs10054149 chr5 101707293 Intergenic 7 152024 CEU:1.0;0.886, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.846 FUNCTIONAL_SNP rs2060833 chr5 101745019 Intron 7 114298 CEU:1.0;0.923, CHB:0.948;0.816, JPT:0.943;0.8, YRI:0.912;0.735 FUNCTIONAL_SNP rs6861350 chr5 101701390 Intergenic 7 157927 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs7731256 chr5 101737777 Intron 7 121540 CEU:1.0;0.881, CHB:1.0;0.952, JPT:1.0;0.867, YRI:1.0;0.845 FUNCTIONAL_SNP rs10041525 chr5 101813238 Intron 7 46079 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs6860381 chr5 101663536 Intergenic 7 195781 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs17273466 chr5 101776835 Intron 7 82482 CEU:1.0;0.882, CHB:1.0;0.954, JPT:1.0;0.863 FUNCTIONAL_SNP rs1376894 chr5 101773239 Intron 7 86078 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs1376898 chr5 101743783 Intron 7 115534 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.863, YRI:1.0;0.85 FUNCTIONAL_SNP rs1376910 chr5 101775267 Intron 7 84050 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs1376911 chr5 101775219 Intron 7 84098 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs6890130 chr5 101719783 Intron 7 139534 CEU:1.0;0.959, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.599 FUNCTIONAL_SNP rs7731310 chr5 101808937 Intron 7 50380 CEU:1.0;0.883, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.817 FUNCTIONAL_SNP rs6893723 chr5 101784937 Intron 7 74380 CEU:1.0;1.0, CHB:0.952;0.905, JPT:1.0;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs10041507 chr5 101813160 Intron 7 46157 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs10223273 chr5 101782182 Intron 7 77135 CEU:1.0;0.882, CHB:1.0;0.953, JPT:1.0;0.863, YRI:1.0;0.85 FUNCTIONAL_SNP rs7722680 chr5 101673587 Intergenic 7 185730 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.867, YRI:1.0;0.843 FUNCTIONAL_SNP rs2400801 chr5 101728042 Intron 7 131275 CEU:1.0;0.888, CHB:1.0;0.95, JPT:1.0;0.867, YRI:1.0;0.838 FUNCTIONAL_SNP rs10069193 chr5 101716620 Intron 7 142697 CEU:1.0;0.956, CHB:1.0;0.947, JPT:1.0;0.779, YRI:1.0;0.795 FUNCTIONAL_SNP rs7732942 chr5 101800228 Intron 7 59089 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.846 FUNCTIONAL_SNP rs1823694 chr5 101677341 Intergenic 7 181976 CEU:1.0;0.924, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs6873305 chr5 101724307 Intron 7 135010 CEU:1.0;0.868, CHB:1.0;0.951, JPT:1.0;0.728, YRI:0.947;0.776 FUNCTIONAL_SNP rs9327836 chr5 101660913 Intergenic 7 198404 CEU:1.0;0.961, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.846 FUNCTIONAL_SNP rs2198246 chr5 101692228 Intergenic 7 167089 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs7356647 chr5 101812162 Intron 7 47155 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.848 FUNCTIONAL_SNP rs9327848 chr5 101700978 Intergenic 7 158339 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.86, YRI:1.0;0.84 FUNCTIONAL_SNP rs10463983 chr5 101860882 Intergenic 7 1565 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs9327859 chr5 101807817 Intron 7 51500 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867 FUNCTIONAL_SNP rs7736579 chr5 101760969 Intron 7 98348 CEU:1.0;0.924, CHB:1.0;0.953, JPT:1.0;0.867, YRI:1.0;0.846 FUNCTIONAL_SNP rs1545488 chr5 101728519 Intron 7 130798 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs10062613 chr5 101725983 Intron 7 133334 CEU:1.0;1.0, CHB:0.947;0.897, JPT:1.0;0.867, YRI:1.0;0.634 FUNCTIONAL_SNP rs10036441 chr5 101707048 Intergenic 7 152269 CEU:1.0;0.886, CHB:1.0;0.953, JPT:1.0;0.867, YRI:1.0;0.843 FUNCTIONAL_SNP rs6873373 chr5 101687035 Intergenic 7 172282 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs1869103 chr5 101679449 Intergenic 7 179868 CEU:1.0;0.922, CHB:1.0;0.953, JPT:1.0;0.864, YRI:1.0;0.842 FUNCTIONAL_SNP rs1869104 chr5 101679298 Intergenic 7 180019 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs1118008 chr5 101810700 Intron 7 48617 CEU:1.0;0.888, CHB:1.0;0.953, JPT:1.0;0.867, YRI:1.0;0.749 FUNCTIONAL_SNP rs1597765 chr5 101703523 Intergenic 7 155794 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs9327841 chr5 101697752 Intergenic 7 161565 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867 FUNCTIONAL_SNP rs1597771 chr5 101803412 Intron 7 55905 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs1562961 chr5 101729242 Intron 7 130075 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs6887766 chr5 101701540 Intergenic 7 157777 CEU:1.0;0.876, CHB:1.0;0.954, JPT:1.0;0.905, YRI:1.0;0.85 FUNCTIONAL_SNP rs7724943 chr5 101698884 Intergenic 7 160433 CEU:1.0;0.883, CHB:1.0;0.911, JPT:1.0;0.523, YRI:1.0;0.843 FUNCTIONAL_SNP rs4085107 chr5 101790944 Intron 7 68373 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.848 FUNCTIONAL_SNP rs2123135 chr5 101708121 Intron 7 151196 CEU:1.0;0.88, CHB:1.0;0.823, JPT:1.0;0.867, YRI:0.911;0.763 FUNCTIONAL_SNP rs6596482 chr5 101736641 Intron 7 122676 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs6596484 chr5 101750196 Intron 7 109121 CEU:1.0;0.888 FUNCTIONAL_SNP rs7719316 chr5 101734999 Intron 7 124318 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.937, YRI:1.0;0.824 FUNCTIONAL_SNP rs6596501 chr5 101851094 Intergenic 7 8223 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.863, YRI:1.0;0.958 FUNCTIONAL_SNP rs10065821 chr5 101747415 Intron 7 111902 CEU:0.958;0.848, CHB:1.0;0.869, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs6885800 chr5 101776226 Intron 7 83091 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.846, YRI:1.0;0.84 FUNCTIONAL_SNP rs11746217 chr5 101795490 Intron 7 63827 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs7711687 chr5 101808799 Intron 7 50518 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.863, YRI:1.0;0.85 FUNCTIONAL_SNP rs2084826 chr5 101737411 Intron 7 121906 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.848 FUNCTIONAL_SNP rs10053625 chr5 101661976 Intergenic 7 197341 CEU:1.0;0.888, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.848 FUNCTIONAL_SNP rs4703230 chr5 101803917 Intron 7 55400 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.867, YRI:1.0;0.85 FUNCTIONAL_SNP rs4703231 chr5 101804066 Intron 7 55251 CEU:0.956;0.81 LEAD_SNP rs26232 chr5 102596720 Intron 2b ASSOCIATION 20453842 Rheumatoid arthritis 7.39794000867 C5orf30 FUNCTIONAL_SNP rs35797 chr5 102614327 Exon,non-coding 7 17607 CEU:1.0;0.864, CHB:1.0;0.812, JPT:1.0;0.879 FUNCTIONAL_SNP rs28158 chr5 102595892 Intron 2b 828 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2288788 chr5 102600569 Intron 3a 3849 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs28157 chr5 102595837 Intron 4 883 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs386352 chr5 102615707 Intergenic 5a 18987 CEU:1.0;0.805, CHB:1.0;0.761, JPT:1.0;0.883 FUNCTIONAL_SNP rs1991797 chr5 102622453 Intergenic 5b 25733 CEU:0.943;0.843, CHB:1.0;1.0, JPT:1.0;0.925 FUNCTIONAL_SNP rs2561477 chr5 102608924 Intron 5b 12204 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939 FUNCTIONAL_SNP rs35801 chr5 102608213 Intron 5b 11493 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;1.0 FUNCTIONAL_SNP rs402962 chr5 102624008 Intergenic 6 27288 CEU:1.0;0.804, CHB:1.0;0.813, JPT:1.0;0.88 FUNCTIONAL_SNP rs2288786 chr5 102600754 Intron 6 4034 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs411648 chr5 102602902 Intron 7 6182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs421946 chr5 102622041 Intergenic 7 25321 CEU:1.0;0.805, CHB:1.0;0.868, JPT:1.0;0.884 FUNCTIONAL_SNP rs35800 chr5 102608681 Intron 7 11961 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.534 LEAD_SNP rs7447447 chr5 104867936 Intergenic 5a ASSOCIATION 21490707 Caffeine consumption 5.15490195999 RAB9BP1 - EFNA5 FUNCTIONAL_SNP rs13180609 chr5 104911468 Intergenic 7 43532 CEU:1.0;0.879, CHB:0.924;0.746, JPT:0.927;0.711, YRI:1.0;1.0 LEAD_SNP rs10479334 chr5 104954328 Intergenic 7 ASSOCIATION 21368711 Personality dimensions 8.69897000434 RAB9BP1 - EFNA5 LEAD_SNP rs252817 chr5 106724588 Intron 4 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.69897000434 EFNA5 FUNCTIONAL_SNP rs252816 chr5 106724411 Intron 4 177 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;0.848 FUNCTIONAL_SNP rs252801 chr5 106757399 Intron 5b 32811 CEU:1.0;0.921, CHB:1.0;1.0, JPT:0.786;0.617 FUNCTIONAL_SNP rs185221 chr5 106753705 Intron 5b 29117 CEU:1.0;0.884, CHB:1.0;1.0 FUNCTIONAL_SNP rs252807 chr5 106739110 Intron 5b 14522 CEU:1.0;0.922, CHB:1.0;1.0 FUNCTIONAL_SNP rs252820 chr5 106730344 Intron 5b 5756 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.598, YRI:0.866;0.689 FUNCTIONAL_SNP rs2559991 chr5 106756023 Intron 6 31435 CEU:0.959;0.883, CHB:1.0;1.0, YRI:0.957;0.845 FUNCTIONAL_SNP rs252813 chr5 106734026 Intron 7 9438 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.904, YRI:0.951;0.704 FUNCTIONAL_SNP rs461914 chr5 106743643 Intron 7 19055 CEU:1.0;0.922, CHB:1.0;1.0, JPT:0.787;0.619 LEAD_SNP rs10074258 chr5 106982560 Intron 6 ASSOCIATION 19668339 Hippocampal atrophy 6.69897000434 EFNA5 FUNCTIONAL_SNP rs17160287 chr5 106971103 Intron 5b 11457 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;0.949, YRI:1.0;0.939 LEAD_SNP rs10447248 chr5 107915736 Intergenic 7 ASSOCIATION 21700879 Adiponectin levels 7.30102999566 FBXL17 - RPS20P3 FUNCTIONAL_SNP rs4957770 chr5 107901927 Intergenic 7 13809 CEU:0.907;0.823, CHB:0.81;0.586, JPT:0.937;0.878 LEAD_SNP rs4460176 chr5 109496960 Intergenic 5b ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.52287874528 MAN2A1 - TMEM232 LEAD_SNP rs17132261 chr5 110008214 Intron 7 ASSOCIATION 19584346 Cardiac structure and function 6.04575749056 TMEM232 FUNCTIONAL_SNP rs17132193 chr5 109864483 Coding 6 143731 CEU:1.0;1.0, CHB:1.0;0.835, JPT:0.925;0.747, YRI:1.0;0.589 FUNCTIONAL_SNP rs3911456 chr5 110089702 Exon,non-coding 6 81488 CEU:1.0;1.0, CHB:1.0;0.707, JPT:1.0;0.611 FUNCTIONAL_SNP rs4957906 chr5 109961463 Intron 5a 46751 CEU:1.0;1.0, CHB:1.0;0.835, JPT:1.0;0.933 FUNCTIONAL_SNP rs17132292 chr5 110038084 Intron 5b 29870 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs17132250 chr5 109994663 Intron 5b 13551 CEU:1.0;1.0, CHB:0.933;0.77, JPT:0.904;0.599 FUNCTIONAL_SNP rs467584 chr5 110117064 Intergenic 6 108850 CEU:1.0;1.0 FUNCTIONAL_SNP rs244995 chr5 110108608 Intergenic 7 100394 CEU:1.0;1.0, JPT:0.853;0.728 FUNCTIONAL_SNP rs4957904 chr5 109874021 Intron 7 134193 CEU:1.0;1.0, CHB:0.804;0.646, JPT:1.0;0.924, YRI:1.0;0.534 FUNCTIONAL_SNP rs184936 chr5 110107241 Intergenic 7 99027 CEU:1.0;1.0, CHB:0.845;0.585, JPT:0.923;0.793 LEAD_SNP rs3806932 chr5 110405675 Intergenic 5b ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 8.52287874528 TSLP FUNCTIONAL_SNP rs3806933 chr5 110406742 Exon,non-coding 5b 1067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2289277 chr5 110409067 Exon,non-coding 2b 3392 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.57 FUNCTIONAL_SNP rs6859041 chr5 110435231 Intron 5b 29556 CEU:1.0;0.96, CHB:1.0;0.718, JPT:1.0;0.77 FUNCTIONAL_SNP rs10038058 chr5 110443281 Intron 5b 37606 CEU:1.0;0.96, CHB:1.0;0.681, JPT:1.0;0.77, YRI:0.947;0.574 FUNCTIONAL_SNP rs10038177 chr5 110436450 Intron 6 30775 CEU:1.0;0.96, CHB:1.0;0.71, JPT:1.0;0.77, YRI:0.941;0.506 FUNCTIONAL_SNP rs2112541 chr5 110449346 Intron 6 43671 CEU:1.0;0.96, CHB:0.864;0.596, JPT:1.0;0.77 FUNCTIONAL_SNP rs10060003 chr5 110449357 Intron 6 43682 CEU:1.0;0.96, CHB:0.864;0.596, JPT:1.0;0.77 FUNCTIONAL_SNP rs1379300 chr5 110441439 Intron 6 35764 CEU:1.0;0.959, CHB:1.0;0.71, JPT:1.0;0.808 FUNCTIONAL_SNP rs10051830 chr5 110452845 Intron 6 47170 CEU:1.0;0.96, CHB:0.864;0.596, JPT:1.0;0.77 FUNCTIONAL_SNP rs10055177 chr5 110450584 Intron 7 44909 CEU:1.0;0.959, CHB:1.0;0.718, JPT:1.0;0.77 FUNCTIONAL_SNP rs6865932 chr5 110436852 Intron 7 31177 CEU:1.0;0.956, CHB:1.0;0.783, JPT:1.0;0.764 FUNCTIONAL_SNP rs7723819 chr5 110427347 Intron 7 21672 CEU:1.0;0.96, CHB:1.0;0.71, JPT:1.0;0.77, YRI:0.947;0.574 FUNCTIONAL_SNP rs6594497 chr5 110415868 Intron 7 10193 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.818 FUNCTIONAL_SNP rs7702774 chr5 110460851 Intron 7 55176 CEU:1.0;0.96, CHB:0.87;0.674, JPT:1.0;0.732 FUNCTIONAL_SNP rs10045255 chr5 110438357 Intron 7 32682 CEU:1.0;0.96, CHB:1.0;0.718, JPT:1.0;0.77 FUNCTIONAL_SNP rs2034896 chr5 110441533 Intron 7 35858 CEU:1.0;0.884, CHB:0.864;0.596, JPT:1.0;0.77 FUNCTIONAL_SNP rs1993465 chr5 110433098 Intron 7 27423 CEU:1.0;0.96, CHB:1.0;0.718, JPT:1.0;0.764, YRI:0.944;0.52 LEAD_SNP rs2416257 chr5 110435490 Intron 7 ASSOCIATION 19198610 Plasma eosinophil count 6.0 WDR36 FUNCTIONAL_SNP rs11948089 chr5 110464393 Exon,non-coding 7 28903 CEU:1.0;1.0 FUNCTIONAL_SNP rs11466750 chr5 110412894 Exon,non-coding 6 22596 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;0.846 FUNCTIONAL_SNP rs17551370 chr5 110404185 Intergenic 4 31305 CEU:1.0;0.923, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs6870356 chr5 110467237 Intron 4 31747 CEU:1.0;1.0 FUNCTIONAL_SNP rs4304115 chr5 110403346 Intergenic 5b 32144 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs13357747 chr5 110433391 Intron 5b 2099 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7731821 chr5 110467918 Intron 5b 32428 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7714869 chr5 110471635 Intergenic 6 36145 CEU:1.0;1.0, JPT:1.0;0.51 FUNCTIONAL_SNP rs10062929 chr5 110408179 Intron 6 27311 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs7705304 chr5 110434261 Intron 6 1229 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10039043 chr5 110444909 Intron 7 9419 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7713025 chr5 110416223 Intron 7 19267 CEU:0.917;0.841, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs6869774 chr5 110467086 Intron 7 31596 CEU:1.0;1.0 FUNCTIONAL_SNP rs10061842 chr5 110402855 Intergenic 7 32635 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;0.846, YRI:1.0;0.848 FUNCTIONAL_SNP rs7729832 chr5 110428744 Intron 7 6746 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10056179 chr5 110442137 Intron 7 6647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1370964 chr5 110429955 Intron 7 5535 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10491334 chr5 110772404 Intron 7 ASSOCIATION 21612516 Longevity 5.69897000434 CAMK4 ASSOCIATION 17903302 Blood pressure 5.39794000867 CAMK4 LEAD_SNP rs469727 chr5 112242968 Intron 5b ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.09691001301 REEP5 LEAD_SNP rs1318772 chr5 112723567 Intron 7 ASSOCIATION 21326311 F-cell distribution 6.0 MCC LEAD_SNP rs17135859 chr5 112996654 Intergenic 5b ASSOCIATION 21326311 F-cell distribution 5.09691001301 YTHDC2 - KCNN2 FUNCTIONAL_SNP rs13435951 chr5 112994003 Intergenic 6 2651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7709362 chr5 112990998 Intergenic 7 5656 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4621553 chr5 113030164 Intergenic 6 ASSOCIATION 21658281 Sudden cardiac arrest 7.39794000867 YTHDC2 - KCNN2 FUNCTIONAL_SNP rs4443413 chr5 113036365 Intergenic 6 6201 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4235750 chr5 113036301 Intergenic 6 6137 CEU:0.942;0.84, CHB:1.0;1.0, JPT:0.784;0.615 FUNCTIONAL_SNP rs10050855 chr5 113029231 Intergenic 7 933 CEU:1.0;0.8, YRI:1.0;0.817 FUNCTIONAL_SNP rs4296793 chr5 113030191 Intergenic 7 27 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4235749 chr5 113036242 Intergenic 7 6078 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 LEAD_SNP rs7702057 chr5 115727838 Intron 7 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 5.09691001301 COMMD10 - SEMA6A LEAD_SNP rs17470137 chr5 122531347 Intergenic 7 ASSOCIATION 19584346 Aortic root size 11.0 PRDM6 - CEP120 FUNCTIONAL_SNP rs337101 chr5 122550646 Intergenic 7 19299 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs17469907 chr5 122528420 Intergenic 7 2927 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs2115172 chr5 122685128 Intron 7 ASSOCIATION 19079260 Weight 5.69897000434 CEP120 FUNCTIONAL_SNP rs6595440 chr5 122718736 Coding 5b 33608 CEU:1.0;0.922, CHB:1.0;0.953, JPT:1.0;0.819, YRI:1.0;0.924 FUNCTIONAL_SNP rs1047440 chr5 122681834 Exon,non-coding 7 3294 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.951, YRI:1.0;0.924 FUNCTIONAL_SNP rs7711753 chr5 122733317 Intron 2a 48189 CEU:1.0;0.922, CHB:1.0;0.952, JPT:1.0;0.819, YRI:1.0;0.924 FUNCTIONAL_SNP rs12658906 chr5 122733395 Intron 4 48267 CEU:0.955;0.838, CHB:1.0;1.0, JPT:1.0;0.813, YRI:1.0;0.962 FUNCTIONAL_SNP rs13184896 chr5 122734005 Intron 4 48877 CEU:1.0;0.922, CHB:1.0;0.953, JPT:1.0;0.819, YRI:1.0;1.0 FUNCTIONAL_SNP rs6868198 chr5 122750714 Intron 5a 65586 CEU:1.0;0.885, CHB:1.0;0.953, JPT:1.0;0.951, YRI:1.0;1.0 FUNCTIONAL_SNP rs13154717 chr5 122723264 Intron 5b 38136 CEU:1.0;0.96, CHB:1.0;0.953, JPT:1.0;0.819, YRI:1.0;1.0 FUNCTIONAL_SNP rs13153729 chr5 122719682 Intron 5b 34554 CEU:1.0;0.957, CHB:1.0;0.953, JPT:1.0;0.819, YRI:1.0;1.0 FUNCTIONAL_SNP rs7725869 chr5 122683671 Intron 6 1457 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.924 FUNCTIONAL_SNP rs2407778 chr5 122700656 Intron 6 15528 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.819, YRI:0.959;0.883 FUNCTIONAL_SNP rs2115173 chr5 122685348 Intron 7 220 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs6891155 chr5 122684131 Intron 7 997 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.962 FUNCTIONAL_SNP rs13176035 chr5 122720020 Intron 7 34892 CEU:1.0;0.96, CHB:1.0;0.953, JPT:1.0;0.819, YRI:1.0;0.924 FUNCTIONAL_SNP rs7715673 chr5 122739735 Intron 7 54607 CEU:1.0;0.92, CHB:1.0;0.951, JPT:1.0;0.853, YRI:1.0;0.96 FUNCTIONAL_SNP rs6595438 chr5 122683996 Intron 7 1132 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.962 FUNCTIONAL_SNP rs6595442 chr5 122743242 Intron 7 58114 CEU:1.0;0.922, CHB:1.0;0.953, JPT:1.0;0.951, YRI:1.0;0.924 FUNCTIONAL_SNP rs7735212 chr5 122688234 Intron 7 3106 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.951, YRI:1.0;1.0 LEAD_SNP rs11241713 chr5 123119565 Intergenic 5a ASSOCIATION 19451621 Amyotrophic lateral sclerosis 5.52287874528 KRT18P16 - ZNF608 FUNCTIONAL_SNP rs17150765 chr5 123131967 Intergenic 5b 12402 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs12519139 chr5 123121277 Intergenic 5b 1712 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17150698 chr5 123077883 Intergenic 6 41682 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.867, YRI:1.0;0.891 FUNCTIONAL_SNP rs12657585 chr5 123132820 Intergenic 7 13255 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.951, YRI:1.0;1.0 FUNCTIONAL_SNP rs11241714 chr5 123123685 Intergenic 7 4120 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4836133 chr5 124332103 Intergenic 4 ASSOCIATION 20935630 Body mass index 8.69897000434 RPL28P3 - RPSAP37 LEAD_SNP rs6862844 chr5 124365967 Intergenic 7 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.39794000867 RPL28P3 - RPSAP37 LEAD_SNP rs2637496 chr5 124743267 Intergenic 7 ASSOCIATION 20041166 HIV-1 control 5.04575749056 RPL28P3 - RPSAP37 FUNCTIONAL_SNP rs1844772 chr5 124746179 Intergenic 7 2912 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.916 LEAD_SNP rs1073203 chr5 125319456 Intergenic 7 ASSOCIATION 21441570 Diabetic retinopathy 5.04575749056 RPSAP37 - GRAMD3 LEAD_SNP rs13182402 chr5 125918148 Intron 7 ASSOCIATION 20072603 Osteoporosis 8.69897000434 ALDH7A1 FUNCTIONAL_SNP rs17154671 chr5 125908203 Intron 6 9945 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13171814 chr5 125916032 Intron 7 2116 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.823 LEAD_SNP rs245201 chr5 127169212 Intron 6 ASSOCIATION 19023125 Brain imaging in schizophrenia (interaction) 7.04575749056 CTXN3 - FLJ33630 FUNCTIONAL_SNP rs245186 chr5 127194286 Intron 4 25074 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.899, YRI:0.942;0.839 FUNCTIONAL_SNP rs151849 chr5 127170643 Intron 5a 1431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs245311 chr5 127166599 Intron 7 2613 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 LEAD_SNP rs10089 chr5 127522543 Exon,non-coding 7 ASSOCIATION 21139019 Ileal carcinoids 5.69897000434 SLC12A2 FUNCTIONAL_SNP rs3087889 chr5 127524944 Exon,non-coding 7 2401 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4835943 chr5 127457569 Intron 2a 64974 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs4835944 chr5 127490870 Intron 2b 31673 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.952, YRI:1.0;0.798 FUNCTIONAL_SNP rs4836358 chr5 127376869 Intron 4 145674 CEU:1.0;0.948, CHB:0.885;0.742, JPT:1.0;0.907 FUNCTIONAL_SNP rs1432614 chr5 127416919 Intron 4 105624 CEU:1.0;0.947, CHB:0.885;0.742, JPT:1.0;0.952 FUNCTIONAL_SNP rs1560636 chr5 127447987 Intron 4 74556 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs1864922 chr5 127420700 Intron 4 101843 CEU:1.0;1.0, CHB:0.942;0.839, JPT:1.0;0.907 FUNCTIONAL_SNP rs6887847 chr5 127473807 Intron 5a 48736 CEU:1.0;1.0, CHB:0.936;0.825, JPT:1.0;0.902 FUNCTIONAL_SNP rs883074 chr5 127445823 Intron 5b 76720 CEU:1.0;0.899, CHB:0.888;0.788, JPT:1.0;0.861 FUNCTIONAL_SNP rs6875982 chr5 127529197 Intergenic 5b 6654 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs3805612 chr5 127505316 Intron 5b 17227 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.952 FUNCTIONAL_SNP rs4836366 chr5 127482494 Intron 5b 40049 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs6595806 chr5 127499764 Intron 5b 22779 CEU:1.0;1.0 FUNCTIONAL_SNP rs4836367 chr5 127482592 Intron 5b 39951 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs7713860 chr5 127428789 Intron 5b 93754 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs2190797 chr5 127352875 Intergenic 5b 169668 CEU:1.0;0.948, CHB:0.884;0.739, JPT:1.0;0.905 FUNCTIONAL_SNP rs1864923 chr5 127420843 Intron 5b 101700 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs3792866 chr5 127479900 Intron 5b 42643 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs4836360 chr5 127458161 Intron 6 64382 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs1036171 chr5 127402798 Intron 6 119745 CEU:1.0;0.948, CHB:0.885;0.742, JPT:1.0;0.907 FUNCTIONAL_SNP rs17164310 chr5 127493679 Intron 6 28864 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs2054444 chr5 127493206 Intron 6 29337 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.952 FUNCTIONAL_SNP rs1962291 chr5 127445373 Intron 6 77170 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs10061367 chr5 127449021 Intron 6 73522 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs10463838 chr5 127518305 Intron 6 4238 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.951 FUNCTIONAL_SNP rs1559263 chr5 127512873 Intron 6 9670 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.952 FUNCTIONAL_SNP rs10478803 chr5 127488855 Intron 6 33688 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.952 FUNCTIONAL_SNP rs3805606 chr5 127470813 Intron 7 51730 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs2016015 chr5 127527253 Intergenic 7 4710 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs3805615 chr5 127519049 Intron 7 3494 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;0.949 FUNCTIONAL_SNP rs17764954 chr5 127514436 Intron 7 8107 CEU:1.0;1.0, CHB:1.0;0.892, JPT:1.0;0.952, YRI:1.0;0.731 FUNCTIONAL_SNP rs7718286 chr5 127459414 Intron 7 63129 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs10060390 chr5 127452947 Intron 7 69596 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.905 FUNCTIONAL_SNP rs1432615 chr5 127395371 Intron 7 127172 CEU:1.0;0.948, CHB:0.881;0.734, JPT:1.0;0.907 FUNCTIONAL_SNP rs2898096 chr5 127433214 Intron 7 89329 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs4836361 chr5 127459991 Intron 7 62552 CEU:1.0;1.0, CHB:0.884;0.782, JPT:1.0;0.896 FUNCTIONAL_SNP rs17164427 chr5 127361736 Intron 7 160807 CEU:1.0;0.948, CHB:0.885;0.742, JPT:1.0;0.907 FUNCTIONAL_SNP rs3816006 chr5 127450581 Intron 7 71962 CEU:1.0;1.0, CHB:0.887;0.786, JPT:1.0;0.907 FUNCTIONAL_SNP rs10478798 chr5 127442394 Intron 7 80149 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs7703634 chr5 127509223 Intron 7 13320 CEU:1.0;1.0, CHB:1.0;0.89, JPT:1.0;0.951 FUNCTIONAL_SNP rs10223203 chr5 127527646 Intergenic 7 5103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs13357268 chr5 127423051 Intron 7 99492 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs1842006 chr5 127508687 Intron 7 13856 CEU:1.0;1.0, CHB:1.0;0.88, JPT:1.0;1.0 FUNCTIONAL_SNP rs10045113 chr5 127386631 Intron 7 135912 CEU:1.0;0.948, CHB:0.885;0.742, JPT:1.0;0.907 FUNCTIONAL_SNP rs6595800 chr5 127411647 Intron 7 110896 CEU:1.0;0.948, CHB:0.885;0.742, JPT:1.0;0.907 FUNCTIONAL_SNP rs4835941 chr5 127430905 Intron 7 91638 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs13355233 chr5 127425350 Intron 7 97193 CEU:1.0;1.0, CHB:0.888;0.788, JPT:1.0;0.907 FUNCTIONAL_SNP rs3805607 chr5 127477418 Intron 7 45125 CEU:1.0;1.0, CHB:0.942;0.839, JPT:1.0;0.905 FUNCTIONAL_SNP rs6862701 chr5 127391249 Intron 7 131294 CEU:1.0;0.946, CHB:0.885;0.742, JPT:1.0;0.865 FUNCTIONAL_SNP rs1012851 chr5 127360241 Intron 7 162302 CEU:1.0;0.948, CHB:0.885;0.742, JPT:1.0;0.907 FUNCTIONAL_SNP rs1985268 chr5 127375931 Intron 7 146612 CEU:1.0;0.948, CHB:0.885;0.742, JPT:1.0;0.907 FUNCTIONAL_SNP rs13358455 chr5 127365786 Intron 7 156757 CEU:1.0;0.948, CHB:0.885;0.742, JPT:1.0;0.907 FUNCTIONAL_SNP rs6873339 chr5 127389650 Intron 7 132893 CEU:1.0;0.948, CHB:0.885;0.742, JPT:1.0;0.95 LEAD_SNP rs374748 chr5 127699375 Intron 6 ASSOCIATION 19553259 Obesity (extreme) 5.39794000867 FBN2 FUNCTIONAL_SNP rs331070 chr5 127724549 Intron 6 25174 CEU:1.0;0.913, YRI:1.0;0.509 LEAD_SNP rs7731657 chr5 129943319 Intergenic 6 ASSOCIATION 17903298 Fasting plasma glucose 5.15490195999 RNU7-53P - RPL11P2 LEAD_SNP rs274546 chr5 131699867 Intron 7 ASSOCIATION 20881960 Height 15.15490196 SLC22A4 - SLC22A5 FUNCTIONAL_SNP rs274558 chr5 131721174 Coding 4 21307 CEU:0.956;0.914, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs272879 chr5 131670546 Coding 4 29321 CEU:0.955;0.911, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.56 FUNCTIONAL_SNP rs272893 chr5 131663062 Coding 5b 36805 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;0.943, YRI:1.0;0.84 FUNCTIONAL_SNP rs274557 chr5 131721204 Intron 2b 21337 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs274567 chr5 131714409 Intron 4 14542 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs270605 chr5 131651811 Intron 4 48056 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.541 FUNCTIONAL_SNP rs4705933 chr5 131678412 Intron 4 21455 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.541 FUNCTIONAL_SNP rs272867 chr5 131681057 Intron 4 18810 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;0.887 FUNCTIONAL_SNP rs274561 chr5 131719228 Intron 5b 19361 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.942;0.839 FUNCTIONAL_SNP rs270602 chr5 131656700 Intron 5b 43167 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;0.943, YRI:1.0;0.84 FUNCTIONAL_SNP rs270613 chr5 131640583 Intron 5b 59284 CEU:0.953;0.868, CHB:0.948;0.898, JPT:1.0;1.0, YRI:1.0;0.541 FUNCTIONAL_SNP rs272842 chr5 131656517 Intron 5b 43350 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.541 FUNCTIONAL_SNP rs272884 chr5 131668654 Intron 5b 31213 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.541 FUNCTIONAL_SNP rs274559 chr5 131720070 Intron 6 20203 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs272889 chr5 131665378 Intron 6 34489 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;0.943, YRI:1.0;0.84 FUNCTIONAL_SNP rs419291 chr5 131633355 Intron 6 66512 CEU:0.956;0.914, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs272865 chr5 131681926 Intron 6 17941 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.539 FUNCTIONAL_SNP rs272869 chr5 131677997 Intron 6 21870 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;0.943, YRI:1.0;0.84 FUNCTIONAL_SNP rs273913 chr5 131661156 Intron 6 38711 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;0.943, YRI:1.0;0.839 FUNCTIONAL_SNP rs273914 chr5 131660431 Intron 6 39436 CEU:0.947;0.851, CHB:0.95;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs274560 chr5 131719450 Intron 7 19583 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs274562 chr5 131718206 Intron 7 18339 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs2631370 chr5 131703776 Intron 7 3909 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.541 FUNCTIONAL_SNP rs272860 chr5 131684175 Intron 7 15692 CEU:0.955;0.911, CHB:0.95;0.902, JPT:1.0;1.0, YRI:1.0;0.531 FUNCTIONAL_SNP rs272874 chr5 131675046 Intron 7 24821 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;0.943, YRI:1.0;0.834 FUNCTIONAL_SNP rs272875 chr5 131674888 Intron 7 24979 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs272881 chr5 131669264 Intron 7 30603 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.541 FUNCTIONAL_SNP rs272886 chr5 131665840 Intron 7 34027 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.541 FUNCTIONAL_SNP rs272894 chr5 131662460 Intron 7 37407 CEU:0.956;0.914, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;0.541 LEAD_SNP rs2073643 chr5 131723288 Intron 4 ASSOCIATION 20860503 Asthma 6.69897000434 SLC22A5 LEAD_SNP rs6596075 chr5 131742228 Intergenic 5b ASSOCIATION 17554300 Crohn's disease 5.52287874528 SLC22A5 - C5orf56 FUNCTIONAL_SNP rs274548 chr5 131730807 Exon,non-coding 6 11421 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs274547 chr5 131731304 Exon,non-coding 7 10924 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2897160 chr5 131741498 Intergenic 4 730 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs274553 chr5 131725832 Intron 4 16396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs274552 chr5 131727346 Intron 5a 14882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs274549 chr5 131729118 Intron 5b 13110 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs274551 chr5 131727680 Intron 5b 14548 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs274554 chr5 131724950 Intron 5b 17278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 LEAD_SNP rs1016988 chr5 131744574 Intergenic 6 ASSOCIATION 20031577 Fibrinogen 12.0 SLC22A5 - C5orf56 FUNCTIONAL_SNP rs2706379 chr5 131805735 Coding 4 61161 CEU:1.0;0.838, CHB:0.878;0.632 FUNCTIONAL_SNP rs2706395 chr5 131796803 Exon,non-coding 4 52229 CEU:1.0;0.827, CHB:0.871;0.615, JPT:0.712;0.508 FUNCTIONAL_SNP rs2057655 chr5 131807624 Exon,non-coding 5b 63050 CEU:1.0;0.838, CHB:0.878;0.632 FUNCTIONAL_SNP rs2522050 chr5 131796609 Exon,non-coding 5a 52035 CEU:1.0;0.838, CHB:0.877;0.628, JPT:0.712;0.508 FUNCTIONAL_SNP rs2522062 chr5 131805416 Exon,non-coding 4 60842 CEU:1.0;0.838, CHB:0.878;0.632 FUNCTIONAL_SNP rs2522064 chr5 131806488 Exon,non-coding 6 61914 CEU:1.0;0.838, CHB:0.878;0.632 FUNCTIONAL_SNP rs2522063 chr5 131805591 Exon,non-coding 2b 61017 CEU:1.0;0.838, CHB:0.878;0.632 FUNCTIONAL_SNP rs2706339 chr5 131800105 Intron 2b 55531 CEU:1.0;0.898, CHB:0.87;0.587, JPT:0.721;0.519 FUNCTIONAL_SNP rs2706383 chr5 131792402 Intron 2b 47828 CEU:1.0;0.838, CHB:0.883;0.671 FUNCTIONAL_SNP rs1003533 chr5 131755651 Intron 2b 11077 CEU:1.0;0.913, CHB:0.948;0.899, JPT:1.0;0.951, YRI:1.0;0.63 FUNCTIONAL_SNP rs17689595 chr5 131732774 Intergenic 2b 11800 CEU:1.0;0.899 FUNCTIONAL_SNP rs7704457 chr5 131744790 Intergenic 4 216 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs1012793 chr5 131781345 Intron 4 36771 CEU:1.0;0.913, CHB:0.939;0.721, JPT:0.938;0.687 FUNCTIONAL_SNP rs2522047 chr5 131795882 Intron 4 51308 CEU:1.0;0.838, CHB:0.879;0.633, JPT:0.715;0.511 FUNCTIONAL_SNP rs7730247 chr5 131781288 Intron 4 36714 CEU:1.0;0.913, CHB:0.941;0.725, JPT:0.938;0.687 FUNCTIONAL_SNP rs1981524 chr5 131756506 Intron 4 11932 CEU:1.0;0.913, CHB:0.948;0.899, JPT:1.0;0.951, YRI:1.0;0.668 FUNCTIONAL_SNP rs2522054 chr5 131799526 Intron 5a 54952 CEU:1.0;0.838, CHB:0.874;0.597, JPT:0.721;0.519 FUNCTIONAL_SNP rs2405528 chr5 131794298 Intron 5b 49724 CEU:1.0;0.838, CHB:0.879;0.633, JPT:0.721;0.519 FUNCTIONAL_SNP rs886286 chr5 131795597 Intron 5b 51023 CEU:1.0;0.838, CHB:0.879;0.633, JPT:0.721;0.519 FUNCTIONAL_SNP rs10900807 chr5 131757480 Intron 5b 12906 CEU:1.0;0.913, CHB:0.948;0.899, JPT:1.0;0.951, YRI:1.0;0.924 FUNCTIONAL_SNP rs17771891 chr5 131744202 Intergenic 5b 372 CEU:1.0;1.0, CHB:1.0;0.723, JPT:0.934;0.672, YRI:1.0;1.0 FUNCTIONAL_SNP rs2522056 chr5 131801726 Intron 5b 57152 CEU:1.0;0.838, CHB:0.874;0.597, JPT:0.721;0.519 FUNCTIONAL_SNP rs2706381 chr5 131810619 Intron 5b 66045 CEU:1.0;0.838, CHB:0.878;0.632 FUNCTIONAL_SNP rs6874639 chr5 131778716 Intron 6 34142 CEU:1.0;0.913, CHB:0.941;0.725, JPT:0.938;0.687 FUNCTIONAL_SNP rs2106854 chr5 131769174 Intron 6 24600 CEU:1.0;0.913, CHB:0.948;0.899, JPT:0.947;0.853 FUNCTIONAL_SNP rs2706373 chr5 131804256 Intron 7 59682 CEU:1.0;0.837, CHB:0.878;0.632 FUNCTIONAL_SNP rs757105 chr5 131795663 Intron 7 51089 CEU:1.0;0.838, CHB:0.879;0.633, JPT:0.721;0.519 LEAD_SNP rs2188962 chr5 131770805 Intron 2a ASSOCIATION 20570966 Crohn's disease 7.0 C5orf56 ASSOCIATION 18587394 Crohn's disease 17.6989700043 C5orf56 FUNCTIONAL_SNP rs1050152 chr5 131676320 Coding 6 94485 CEU:1.0;0.961 FUNCTIONAL_SNP rs736801 chr5 131833599 Intergenic 2b 62794 CEU:1.0;0.846 FUNCTIONAL_SNP rs17622656 chr5 131820997 Intron 4 50192 CEU:1.0;0.85 FUNCTIONAL_SNP rs4705950 chr5 131793286 Intron 4 22481 CEU:1.0;0.923, YRI:1.0;1.0 FUNCTIONAL_SNP rs11748193 chr5 131725329 Intron 4 45476 CEU:0.956;0.81, YRI:1.0;1.0 FUNCTIONAL_SNP rs17516457 chr5 131590387 Intron 4 180418 CEU:0.919;0.845, YRI:1.0;1.0 FUNCTIONAL_SNP rs2522057 chr5 131801947 Intron 5a 31142 CEU:1.0;0.923 FUNCTIONAL_SNP rs11739135 chr5 131733397 Intergenic 5a 37408 CEU:0.955;0.805, YRI:1.0;1.0 FUNCTIONAL_SNP rs6866614 chr5 131787137 Intron 5b 16332 CEU:1.0;0.923 FUNCTIONAL_SNP rs11741255 chr5 131811182 Intron 5b 40377 CEU:1.0;0.957 FUNCTIONAL_SNP rs11951091 chr5 131786595 Intron 5b 15790 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12521868 chr5 131784393 Intron 6 13588 CEU:1.0;1.0 FUNCTIONAL_SNP rs17622378 chr5 131778452 Intron 6 7647 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12515180 chr5 131785684 Intron 6 14879 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2248116 chr5 131804347 Intron 7 33542 CEU:1.0;0.921 FUNCTIONAL_SNP rs2522052 chr5 131798487 Intron 7 27682 CEU:1.0;0.921 FUNCTIONAL_SNP rs11746555 chr5 131727033 Intron 7 43772 CEU:0.956;0.81, YRI:1.0;1.0 LEAD_SNP rs12521868 chr5 131784393 Intron 6 ASSOCIATION 21102463 Crohn's disease 20.0 C5orf56 FUNCTIONAL_SNP rs1050152 chr5 131676320 Coding 6 108073 CEU:1.0;0.961 FUNCTIONAL_SNP rs2188962 chr5 131770805 Intron 2a 13588 CEU:1.0;1.0 FUNCTIONAL_SNP rs736801 chr5 131833599 Intergenic 2b 49206 CEU:1.0;0.846 FUNCTIONAL_SNP rs17622656 chr5 131820997 Intron 4 36604 CEU:1.0;0.85 FUNCTIONAL_SNP rs4705950 chr5 131793286 Intron 4 8893 CEU:1.0;0.923 FUNCTIONAL_SNP rs11748193 chr5 131725329 Intron 4 59064 CEU:0.956;0.81 FUNCTIONAL_SNP rs17516457 chr5 131590387 Intron 4 194006 CEU:0.919;0.845 FUNCTIONAL_SNP rs2522057 chr5 131801947 Intron 5a 17554 CEU:1.0;0.923 FUNCTIONAL_SNP rs11739135 chr5 131733397 Intergenic 5a 50996 CEU:0.955;0.805 FUNCTIONAL_SNP rs6866614 chr5 131787137 Intron 5b 2744 CEU:1.0;0.923 FUNCTIONAL_SNP rs11741255 chr5 131811182 Intron 5b 26789 CEU:1.0;0.957 FUNCTIONAL_SNP rs11951091 chr5 131786595 Intron 5b 2202 CEU:1.0;1.0 FUNCTIONAL_SNP rs17622378 chr5 131778452 Intron 6 5941 CEU:1.0;1.0 FUNCTIONAL_SNP rs12515180 chr5 131785684 Intron 6 1291 CEU:1.0;1.0 FUNCTIONAL_SNP rs2248116 chr5 131804347 Intron 7 19954 CEU:1.0;0.921 FUNCTIONAL_SNP rs2522052 chr5 131798487 Intron 7 14094 CEU:1.0;0.921 FUNCTIONAL_SNP rs11746555 chr5 131727033 Intron 7 57360 CEU:0.956;0.81 LEAD_SNP rs2522056 chr5 131801726 Intron 5b ASSOCIATION 20031576 Fibrinogen 15.0 C5orf56 - IRF1 FUNCTIONAL_SNP rs2706379 chr5 131805735 Coding 4 4009 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.95, YRI:0.96;0.921 FUNCTIONAL_SNP rs2706395 chr5 131796803 Exon,non-coding 4 4923 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2057655 chr5 131807624 Exon,non-coding 5b 5898 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.95, YRI:1.0;0.96 FUNCTIONAL_SNP rs2522050 chr5 131796609 Exon,non-coding 5a 5117 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2522062 chr5 131805416 Exon,non-coding 4 3690 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.949, YRI:1.0;0.96 FUNCTIONAL_SNP rs2522064 chr5 131806488 Exon,non-coding 6 4762 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.95, YRI:1.0;0.96 FUNCTIONAL_SNP rs2522063 chr5 131805591 Exon,non-coding 2b 3865 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.95, YRI:1.0;0.96 FUNCTIONAL_SNP rs2706339 chr5 131800105 Intron 2b 1621 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2706383 chr5 131792402 Intron 2b 9324 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;0.951, YRI:1.0;1.0 FUNCTIONAL_SNP rs1003533 chr5 131755651 Intron 2b 46075 CEU:1.0;0.918, CHB:0.939;0.688, JPT:0.774;0.569 FUNCTIONAL_SNP rs7704457 chr5 131744790 Intergenic 4 56936 CEU:1.0;0.838, CHB:0.874;0.597, JPT:0.721;0.519 FUNCTIONAL_SNP rs1012793 chr5 131781345 Intron 4 20381 CEU:1.0;0.918, CHB:0.948;0.856, JPT:1.0;0.782 FUNCTIONAL_SNP rs2522047 chr5 131795882 Intron 4 5844 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7730247 chr5 131781288 Intron 4 20438 CEU:1.0;0.918, CHB:0.949;0.858, JPT:1.0;0.782 FUNCTIONAL_SNP rs1981524 chr5 131756506 Intron 4 45220 CEU:1.0;0.918, CHB:0.939;0.688, JPT:0.774;0.569 FUNCTIONAL_SNP rs2522054 chr5 131799526 Intron 5a 2200 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs886286 chr5 131795597 Intron 5b 6129 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2405528 chr5 131794298 Intron 5b 7428 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10900807 chr5 131757480 Intron 5b 44246 CEU:1.0;0.918, CHB:0.939;0.688, JPT:0.774;0.569 FUNCTIONAL_SNP rs2706381 chr5 131810619 Intron 5b 8893 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.95, YRI:1.0;0.848 FUNCTIONAL_SNP rs17771891 chr5 131744202 Intergenic 5b 57524 CEU:1.0;0.838 FUNCTIONAL_SNP rs6874639 chr5 131778716 Intron 6 23010 CEU:1.0;0.918, CHB:0.949;0.858, JPT:1.0;0.782 FUNCTIONAL_SNP rs1016988 chr5 131744574 Intergenic 6 57152 CEU:1.0;0.838, CHB:0.874;0.597, JPT:0.721;0.519 FUNCTIONAL_SNP rs2106854 chr5 131769174 Intron 6 32552 CEU:1.0;0.918, CHB:0.939;0.688, JPT:0.772;0.567 FUNCTIONAL_SNP rs2706373 chr5 131804256 Intron 7 2530 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.95, YRI:1.0;0.96 FUNCTIONAL_SNP rs757105 chr5 131795663 Intron 7 6063 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4705952 chr5 131839618 Intergenic 7 ASSOCIATION 21300955 C-reactive protein 8.0 IRF1 - IL5 LEAD_SNP rs4143832 chr5 131862977 Intergenic 4 ASSOCIATION 19198610 Plasma eosinophil count 10.0 IRF1 - IL5 FUNCTIONAL_SNP rs17690122 chr5 131867835 Intergenic 7 4858 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs763595 chr5 131863244 Intergenic 7 267 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2706390 chr5 131842280 Intergenic 7 20697 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2244012 chr5 131901225 Intron 7 ASSOCIATION 20159242 Asthma 6.52287874528 RAD50 FUNCTIONAL_SNP rs12653750 chr5 131971902 Intron 2b 70677 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2240032 chr5 131977127 Intron 3a 75902 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0 FUNCTIONAL_SNP rs1881457 chr5 131992409 Intron 4 91184 CEU:1.0;0.874, CHB:1.0;0.538, JPT:1.0;0.652 FUNCTIONAL_SNP rs2040704 chr5 131973177 Intron 5a 71952 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17622991 chr5 131932753 Intron 5a 31528 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2158177 chr5 131984058 Intron 5a 82833 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs3091307 chr5 131989136 Intron 5a 87911 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.842, YRI:1.0;0.87 FUNCTIONAL_SNP rs12652920 chr5 131885240 Intergenic 5a 15985 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3798134 chr5 131965179 Intron 5b 63954 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3798135 chr5 131965109 Intron 5b 63884 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2074369 chr5 131973663 Intron 6 72438 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10463893 chr5 131928039 Intron 6 26814 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2522394 chr5 131944129 Intron 6 42904 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs6596087 chr5 131968609 Intron 6 67384 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2897443 chr5 131929594 Intron 6 28369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2299015 chr5 131901497 Intron 7 272 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2301713 chr5 131951996 Intron 7 50771 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2246176 chr5 131917350 Intron 7 16125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs7449456 chr5 131953427 Intron 7 52202 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2706338 chr5 131895849 Intron 7 5376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2522403 chr5 131915317 Intron 7 14092 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs2706347 chr5 131905117 Intron 7 3892 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.877 FUNCTIONAL_SNP rs2706348 chr5 131905810 Intron 7 4585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10520114 chr5 131948891 Intron 7 47666 CEU:1.0;1.0, CHB:1.0;0.813, JPT:1.0;1.0 FUNCTIONAL_SNP rs12187537 chr5 131939904 Intron 7 38679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924 FUNCTIONAL_SNP rs2706370 chr5 131933016 Intron 7 31791 CEU:1.0;0.938, CHB:1.0;0.813, JPT:1.0;1.0, YRI:0.95;0.821 FUNCTIONAL_SNP rs2706372 chr5 131935477 Intron 7 34252 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs6596086 chr5 131952222 Intron 7 50997 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs17166050 chr5 131915213 Intron 7 13988 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2252775 chr5 131918444 Intron 7 17219 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs2106984 chr5 131953066 Intron 7 51841 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs6871536 chr5 131969874 Intron 7 68649 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7737470 chr5 131974063 Intron 7 72838 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0 FUNCTIONAL_SNP rs2040703 chr5 131972258 Intron 7 71033 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.854 LEAD_SNP rs2040704 chr5 131973177 Intron 5a ASSOCIATION 18846228 Serum IgE levels 7.39794000867 RAD50 FUNCTIONAL_SNP rs3091307 chr5 131989136 Intron 5a 15959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.842, YRI:1.0;0.87 FUNCTIONAL_SNP rs2074369 chr5 131973663 Intron 6 486 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2522394 chr5 131944129 Intron 6 29048 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs2706348 chr5 131905810 Intron 7 67367 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2522403 chr5 131915317 Intron 7 57860 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs2706347 chr5 131905117 Intron 7 68060 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.877 FUNCTIONAL_SNP rs2244012 chr5 131901225 Intron 7 71952 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2246176 chr5 131917350 Intron 7 55827 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs2706370 chr5 131933016 Intron 7 40161 CEU:1.0;0.938, CHB:1.0;0.813, JPT:1.0;1.0, YRI:0.95;0.821 FUNCTIONAL_SNP rs2706372 chr5 131935477 Intron 7 37700 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs6596086 chr5 131952222 Intron 7 20955 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs2106984 chr5 131953066 Intron 7 20111 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs2040703 chr5 131972258 Intron 7 919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.854 LEAD_SNP rs1295686 chr5 131995843 Intron 4 ASSOCIATION 20860503 Asthma 7.0 IL13 LEAD_SNP rs20541 chr5 131995964 Coding 7 ASSOCIATION 19169254 Psoriasis 14.3010299957 IL13 LEAD_SNP rs17166496 chr5 132628884 Intron 4 ASSOCIATION 17554300 Type 1 diabetes 5.30102999566 FSTL4 LEAD_SNP rs1644305 chr5 133203596 Intergenic 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.09691001301 FSTL4 - C5orf15 FUNCTIONAL_SNP rs1644308 chr5 133199549 Intergenic 5a 4047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13187289 chr5 133849177 Intergenic 7 ASSOCIATION 21102462 Menarche (age at onset) 9.69897000434 RPS10P11 - PHF15 FUNCTIONAL_SNP rs329119 chr5 133861716 Intron 4 12539 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs6891492 chr5 133851599 Intergenic 5b 2422 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 LEAD_SNP rs31198 chr5 134372685 Intron 5b ASSOCIATION 18391951 Height 5.09691001301 LOC389328;LOC100288655 FUNCTIONAL_SNP rs479632 chr5 134364518 Coding 4 8167 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs254560 chr5 134443606 Intron 5b ASSOCIATION 21297633 Ulcerative colitis 9.0 PITX1 - H2AFY FUNCTIONAL_SNP rs254557 chr5 134446275 Intron 5b 2669 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs254562 chr5 134441457 Intron 5b 2149 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs254563 chr5 134440426 Intron 5b 3180 CEU:0.952;0.864, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17715902 chr5 134451465 Intron 5b 7859 CEU:0.949;0.818, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.589 FUNCTIONAL_SNP rs17659254 chr5 134451317 Intron 5b 7711 CEU:0.949;0.818, CHB:1.0;1.0, JPT:1.0;0.895 FUNCTIONAL_SNP rs745558 chr5 134453814 Intron 6 10208 CEU:0.949;0.816, CHB:1.0;0.915, JPT:1.0;1.0 FUNCTIONAL_SNP rs12522532 chr5 134450121 Intron 7 6515 CEU:0.947;0.813, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.589 FUNCTIONAL_SNP rs17659312 chr5 134453073 Intron 7 9467 CEU:0.949;0.818, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs254577 chr5 134422204 Intron 7 21402 CEU:0.902;0.814 LEAD_SNP rs477687 chr5 134467700 Intron 5b ASSOCIATION 21502085 AIDS progression 5.22184874962 PITX1 - H2AFY FUNCTIONAL_SNP rs687444 chr5 134472002 Intron 3a 4302 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs608705 chr5 134470133 Intron 4 2433 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs651764 chr5 134467365 Intron 7 335 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.506 FUNCTIONAL_SNP rs625343 chr5 134468714 Intron 7 1014 CEU:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs757647 chr5 137707315 Intron 4 ASSOCIATION 21102462 Menarche (age at onset) 7.30102999566 KDM3B FUNCTIONAL_SNP rs11334 chr5 137772296 Exon,non-coding 5b 64981 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs12659034 chr5 137773525 Intergenic 5b 66210 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.963;0.927 FUNCTIONAL_SNP rs7734755 chr5 137770557 Intron 6 63242 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs740077 chr5 137760083 Intron 7 52768 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12514133 chr5 137742465 Intron 7 35150 CEU:1.0;1.0, CHB:0.952;0.906, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17171818 chr5 137725003 Intron 7 17688 CEU:1.0;0.94, CHB:1.0;0.86, JPT:1.0;0.9, YRI:0.962;0.86 LEAD_SNP rs11167764 chr5 141479065 Intergenic 7 ASSOCIATION 21102463 Crohn's disease 8.69897000434 MRPL11P2 - NDFIP1 FUNCTIONAL_SNP rs9324865 chr5 141488792 Intron 2b 9727 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.93, YRI:0.938;0.676 FUNCTIONAL_SNP rs6887599 chr5 141484349 Intergenic 6 5284 CEU:1.0;1.0, CHB:1.0;0.929, JPT:1.0;1.0, YRI:0.947;0.897 FUNCTIONAL_SNP rs891991 chr5 141484977 Intergenic 6 5912 CEU:1.0;1.0 FUNCTIONAL_SNP rs891986 chr5 141466080 Intergenic 7 12985 CEU:1.0;1.0, CHB:1.0;0.935, JPT:1.0;0.868 LEAD_SNP rs4624820 chr5 141681788 Intergenic 6 ASSOCIATION 20543847 Testicular germ cell cancer 14.0 NDFIP1 - SPRY4 ASSOCIATION 19483681 Testicular germ cell tumor 12.5228787453 NDFIP1 - SPRY4 FUNCTIONAL_SNP rs7729647 chr5 141685706 Intergenic 4 3918 CEU:1.0;0.914, CHB:1.0;0.881, JPT:1.0;1.0 FUNCTIONAL_SNP rs7723984 chr5 141689777 Intergenic 4 7989 CEU:1.0;0.92, CHB:1.0;0.943, JPT:1.0;0.707, YRI:1.0;0.6 FUNCTIONAL_SNP rs12521013 chr5 141663364 Intergenic 5a 18424 CEU:0.958;0.917, CHB:1.0;0.885, JPT:1.0;1.0, YRI:1.0;0.794 FUNCTIONAL_SNP rs11744604 chr5 141676198 Intergenic 5a 5590 CEU:0.955;0.837, CHB:1.0;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs6580240 chr5 141684389 Intergenic 5b 2601 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.707, YRI:1.0;0.621 FUNCTIONAL_SNP rs4912843 chr5 141681227 Intergenic 5b 561 CEU:1.0;0.88, CHB:1.0;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs6897876 chr5 141687639 Intergenic 5b 5851 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.751 FUNCTIONAL_SNP rs7736055 chr5 141686649 Intergenic 5b 4861 CEU:1.0;0.88, CHB:1.0;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs6867347 chr5 141678046 Intergenic 6 3742 CEU:0.953;0.832, CHB:1.0;0.879, JPT:1.0;1.0 FUNCTIONAL_SNP rs7717417 chr5 141686532 Intergenic 6 4744 CEU:1.0;0.88, CHB:1.0;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs11744608 chr5 141676257 Intergenic 7 5531 CEU:0.947;0.853, CHB:1.0;0.859, JPT:1.0;1.0 LEAD_SNP rs17577085 chr5 141863604 Intergenic 6 ASSOCIATION 21347282 Coronary heart disease 5.39794000867 SPRY4 - RPS12P10 LEAD_SNP rs152528 chr5 142017860 Intron 7 ASSOCIATION 21348951 Cardiac hypertrophy 6.09691001301 FGF1 FUNCTIONAL_SNP rs12523052 chr5 142020438 Intron 5b 2578 CEU:1.0;0.849, CHB:0.929;0.863, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs249923 chr5 142015389 Intron 7 2471 CEU:0.957;0.843, CHB:1.0;1.0, JPT:1.0;0.873, YRI:1.0;1.0 LEAD_SNP rs3776331 chr5 142441794 Intron 7 ASSOCIATION 18759275 Serum uric acid 5.09691001301 ARHGAP26 FUNCTIONAL_SNP rs3893579 chr5 142446341 Intron 2a 4547 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs3822393 chr5 142446414 Intron 2b 4620 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942, YRI:1.0;1.0 LEAD_SNP rs17100498 chr5 143003605 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.30102999566 RPL7P21 - HMHB1 FUNCTIONAL_SNP rs246430 chr5 142982181 Intergenic 5a 21424 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs246431 chr5 142982126 Intergenic 5a 21479 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs13188163 chr5 142999645 Intron 6 3960 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs246536 chr5 142991695 Intron 7 11910 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs11167822 chr5 142998440 Intron 7 5165 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs193553 chr5 142992341 Intron 7 11264 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.778 FUNCTIONAL_SNP rs629622 chr5 142997445 Intron 7 6160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs17100506 chr5 143005388 Intron 7 1783 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1864982 chr5 146320823 Intron 6 ASSOCIATION 19581569 Alcohol dependence 5.52287874528 PPP2R2B FUNCTIONAL_SNP rs2915844 chr5 146323052 Intron 6 2229 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs964245 chr5 146309455 Intron 6 11368 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0 FUNCTIONAL_SNP rs560150 chr5 146314104 Intron 6 6719 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs560039 chr5 146311447 Intron 6 9376 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0, YRI:0.962;0.86 FUNCTIONAL_SNP rs1036201 chr5 146329844 Intron 7 9021 CEU:1.0;1.0, CHB:1.0;0.886, JPT:1.0;1.0 FUNCTIONAL_SNP rs2926170 chr5 146312399 Intron 7 8424 CEU:1.0;1.0, CHB:1.0;0.89, JPT:1.0;1.0 FUNCTIONAL_SNP rs2915833 chr5 146307704 Intron 7 13119 CEU:1.0;1.0, CHB:1.0;0.89, JPT:1.0;1.0 LEAD_SNP rs9325032 chr5 146415216 Intron 7 ASSOCIATION 17903297 Cognitive test performance 5.52287874528 PPP2R2B LEAD_SNP rs11168048 chr5 147842353 Intron 7 ASSOCIATION 20010835 Pulmonary function 11.0 HTR4 FUNCTIONAL_SNP rs10075211 chr5 147839537 Intron 3a 2816 CEU:0.956;0.839, CHB:1.0;0.5, JPT:1.0;0.636 FUNCTIONAL_SNP rs12374521 chr5 147836880 Intron 3a 5473 CEU:1.0;0.918, CHB:1.0;0.5, JPT:1.0;0.636 FUNCTIONAL_SNP rs3995090 chr5 147845815 Intron 5b 3462 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.79 FUNCTIONAL_SNP rs10463406 chr5 147838844 Intron 6 3509 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7733088 chr5 147856333 Intron 6 13980 CEU:1.0;0.841, JPT:0.924;0.664, YRI:1.0;0.509 FUNCTIONAL_SNP rs7735184 chr5 147844392 Intron 7 2039 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11168049 chr5 147855264 Intron 7 12911 CEU:1.0;0.803, JPT:0.929;0.649, YRI:1.0;0.704 FUNCTIONAL_SNP rs6889822 chr5 147846707 Intron 7 4354 CEU:1.0;0.841, CHB:1.0;0.649, JPT:1.0;0.586, YRI:1.0;0.875 FUNCTIONAL_SNP rs7715901 chr5 147856392 Intron 7 14039 CEU:1.0;0.841, JPT:0.922;0.623, YRI:1.0;0.509 LEAD_SNP rs3995090 chr5 147845815 Intron 5b ASSOCIATION 20010834 Pulmonary function 8.39794000867 HTR4 FUNCTIONAL_SNP rs6580550 chr5 147856232 Exon,non-coding 7 10417 CEU:0.957;0.877 FUNCTIONAL_SNP rs10075211 chr5 147839537 Intron 3a 6278 CEU:1.0;0.847, JPT:1.0;0.564 FUNCTIONAL_SNP rs12374521 chr5 147836880 Intron 3a 8935 CEU:1.0;0.845, JPT:1.0;0.564 FUNCTIONAL_SNP rs6887366 chr5 147851270 Intron 4 5455 CEU:1.0;0.882, JPT:1.0;0.564 FUNCTIONAL_SNP rs1989154 chr5 147848890 Intron 5b 3075 CEU:1.0;0.882, JPT:1.0;0.564 FUNCTIONAL_SNP rs10463406 chr5 147838844 Intron 6 6971 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.79 FUNCTIONAL_SNP rs3995091 chr5 147849759 Intron 6 3944 CEU:1.0;0.88, JPT:1.0;0.559 FUNCTIONAL_SNP rs7733088 chr5 147856333 Intron 6 10518 CEU:1.0;0.918, JPT:0.863;0.623, YRI:1.0;0.644 FUNCTIONAL_SNP rs1985524 chr5 147847788 Intron 6 1973 CEU:1.0;0.882, JPT:1.0;0.564 FUNCTIONAL_SNP rs7735184 chr5 147844392 Intron 7 1423 CEU:1.0;0.959, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;0.79 FUNCTIONAL_SNP rs11168048 chr5 147842353 Intron 7 3462 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.79 FUNCTIONAL_SNP rs11168049 chr5 147855264 Intron 7 9449 CEU:1.0;0.913, CHB:1.0;0.55, JPT:0.859;0.616, YRI:0.827;0.585 FUNCTIONAL_SNP rs13156542 chr5 147836609 Intron 7 9206 CEU:1.0;0.847, JPT:1.0;0.564 FUNCTIONAL_SNP rs6889822 chr5 147846707 Intron 7 892 CEU:1.0;0.918, CHB:1.0;0.681, JPT:1.0;0.607, YRI:1.0;0.691 FUNCTIONAL_SNP rs7715901 chr5 147856392 Intron 7 10577 CEU:1.0;0.918, JPT:0.858;0.583, YRI:1.0;0.644 FUNCTIONAL_SNP rs10037493 chr5 147854970 Intron 7 9155 CEU:0.956;0.84 LEAD_SNP rs10058728 chr5 148904092 Intron 5b ASSOCIATION 21642993 Esophageal cancer 8.30102999566 CSNK1A1 LEAD_SNP rs32579 chr5 149210848 Intron 7 ASSOCIATION 19340012 Tanning 5.39794000867 PPARGC1B LEAD_SNP rs2304069 chr5 149406733 Intron 2b ASSOCIATION 20041166 HIV-1 control 5.15490195999 HMGXB3 FUNCTIONAL_SNP rs10875553 chr5 149374932 Coding 7 31801 CEU:0.928;0.804, CHB:0.892;0.795, JPT:1.0;0.952 FUNCTIONAL_SNP rs6579767 chr5 149406271 Coding 4 462 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs8073 chr5 149362400 Exon,non-coding 5a 44333 CEU:0.928;0.804, CHB:0.944;0.845, JPT:1.0;1.0 FUNCTIONAL_SNP rs4705409 chr5 149414899 Intron 2a 8166 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2544931 chr5 149367837 Intergenic 3a 38896 CEU:0.928;0.804, CHB:1.0;0.898, JPT:1.0;1.0 FUNCTIONAL_SNP rs2340462 chr5 149415219 Intron 3a 8486 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1469691 chr5 149386716 Intron 3a 20017 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7737689 chr5 149396159 Intron 5a 10574 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10038824 chr5 149369776 Intergenic 5a 36957 CEU:0.928;0.804, CHB:1.0;0.849, JPT:1.0;1.0 FUNCTIONAL_SNP rs1433010 chr5 149383954 Intron 5b 22779 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9324637 chr5 149390947 Intron 5b 15786 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9324638 chr5 149400718 Intron 5b 6015 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4288106 chr5 149394872 Intron 6 11861 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4705408 chr5 149412545 Intron 7 5812 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7734382 chr5 149383241 Intron 7 23492 CEU:1.0;0.929, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.63 FUNCTIONAL_SNP rs2340463 chr5 149409294 Intron 7 2561 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs216125 chr5 149428395 Intron 7 21662 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.948 FUNCTIONAL_SNP rs216126 chr5 149428424 Intron 7 21691 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs216132 chr5 149431259 Intron 7 24526 CEU:1.0;0.874, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs216127 chr5 149428890 Intron 7 22157 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs10068537 chr5 149403193 Intron 7 3540 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9324640 chr5 149413186 Intron 7 6453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2244195 chr5 149403528 Intron 7 3205 CEU:1.0;1.0 FUNCTIONAL_SNP rs1962603 chr5 149393006 Intron 7 13727 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2276983 chr5 149424966 Intron 7 18233 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10045945 chr5 149419297 Intron 7 12564 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0 LEAD_SNP rs13361189 chr5 150223387 Intergenic 5a ASSOCIATION 17554261 Crohn's disease 9.69897000434 C5orf62 - IRGM FUNCTIONAL_SNP rs10065172 chr5 150227998 Coding 5b 4611 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10058943 chr5 150226586 Exon,non-coding 2b 3199 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9324659 chr5 150245853 Intergenic 5b 22466 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.897 FUNCTIONAL_SNP rs2004711 chr5 150225068 Intergenic 6 1681 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7709721 chr5 150246858 Intergenic 7 23471 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.897 FUNCTIONAL_SNP rs10078968 chr5 150244273 Intergenic 7 20886 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs1896707 chr5 150245129 Intergenic 7 21742 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.897 FUNCTIONAL_SNP rs1896709 chr5 150245032 Intergenic 7 21645 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.897 FUNCTIONAL_SNP rs11951694 chr5 150254338 Intergenic 7 30951 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs7705542 chr5 150228318 Intergenic 7 4931 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11955172 chr5 150254378 Intergenic 7 30991 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs11955174 chr5 150254391 Intergenic 7 31004 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 LEAD_SNP rs1000113 chr5 150240076 Intergenic 4 ASSOCIATION 17554300 Crohn's disease 6.52287874528 IRGM - ZNF300 FUNCTIONAL_SNP rs11957134 chr5 150230950 Intergenic 6 9126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.911 FUNCTIONAL_SNP rs11167515 chr5 150239471 Intergenic 7 605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12652003 chr5 150231945 Intergenic 7 8131 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 LEAD_SNP rs11747270 chr5 150258867 Intergenic 6 ASSOCIATION 18587394 Crohn's disease 15.5228787453 IRGM - ZNF300 FUNCTIONAL_SNP rs1820682 chr5 150262142 Intergenic 6 3275 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3857422 chr5 150268609 Intergenic 6 9742 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7716903 chr5 150258574 Intergenic 6 293 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7714415 chr5 150270292 Intergenic 6 11425 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs10053750 chr5 150270051 Intergenic 6 11184 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7714584 chr5 150270420 Intergenic 6 11553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7736873 chr5 150258482 Intergenic 7 385 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10463310 chr5 150260905 Intergenic 7 2038 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7709464 chr5 150269441 Intergenic 7 10574 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4560537 chr5 150262586 Intergenic 7 3719 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3900064 chr5 150264414 Intergenic 7 5547 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs1816256 chr5 150272853 Intergenic 7 13986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs10041072 chr5 150259642 Intergenic 7 775 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11167519 chr5 150265407 Intergenic 7 6540 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11167520 chr5 150265639 Intergenic 7 6772 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs7732643 chr5 150261436 Intergenic 7 2569 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10064334 chr5 150267567 Intergenic 7 8700 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7714584 chr5 150270420 Intergenic 6 ASSOCIATION 21102463 Crohn's disease 18.096910013 IRGM - ZNF300 FUNCTIONAL_SNP rs10065172 chr5 150227998 Coding 5b 42422 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.787;0.53 FUNCTIONAL_SNP rs17800987 chr5 150323428 Exon,non-coding 7 53008 CEU:1.0;1.0, CHB:0.844;0.713, JPT:1.0;0.904 FUNCTIONAL_SNP rs10058943 chr5 150226586 Exon,non-coding 2b 43834 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.759;0.515 FUNCTIONAL_SNP rs10051924 chr5 150226639 Exon,non-coding 4 43781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7724036 chr5 150284808 Intergenic 4 14388 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;0.904, YRI:0.887;0.759 FUNCTIONAL_SNP rs1000113 chr5 150240076 Intergenic 4 30344 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;1.0 FUNCTIONAL_SNP rs13361189 chr5 150223387 Intergenic 5a 47033 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.765;0.524 FUNCTIONAL_SNP rs11741861 chr5 150277909 Intron 5a 7489 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;1.0 FUNCTIONAL_SNP rs9324659 chr5 150245853 Intergenic 5b 24567 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.834;0.559 FUNCTIONAL_SNP rs1820682 chr5 150262142 Intergenic 6 8278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3857422 chr5 150268609 Intergenic 6 1811 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7716903 chr5 150258574 Intergenic 6 11846 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1428553 chr5 150257627 Intergenic 6 12793 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.885;0.784 FUNCTIONAL_SNP rs1428554 chr5 150257616 Intergenic 6 12804 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.887;0.786 FUNCTIONAL_SNP rs7714415 chr5 150270292 Intergenic 6 128 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs10053750 chr5 150270051 Intergenic 6 369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2004711 chr5 150225068 Intergenic 6 45352 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.791;0.538 FUNCTIONAL_SNP rs2344181 chr5 150262574 Intergenic 6 7846 CEU:1.0;1.0 FUNCTIONAL_SNP rs11957134 chr5 150230950 Intergenic 6 39470 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;1.0 FUNCTIONAL_SNP rs1428555 chr5 150257391 Intergenic 6 13029 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.882;0.749 FUNCTIONAL_SNP rs11747270 chr5 150258867 Intergenic 6 11553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs751627 chr5 150225113 Intergenic 7 45307 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7709721 chr5 150246858 Intergenic 7 23562 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.834;0.559 FUNCTIONAL_SNP rs7736873 chr5 150258482 Intergenic 7 11938 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10463307 chr5 150254620 Intergenic 7 15800 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10463310 chr5 150260905 Intergenic 7 9515 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6579807 chr5 150286845 Intergenic 7 16425 CEU:1.0;1.0, CHB:1.0;0.628, JPT:1.0;0.899 FUNCTIONAL_SNP rs4560537 chr5 150262586 Intergenic 7 7834 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3900064 chr5 150264414 Intergenic 7 6006 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs7705542 chr5 150228318 Intergenic 7 42102 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.795;0.544 FUNCTIONAL_SNP rs10875560 chr5 150245724 Intergenic 7 24696 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1816256 chr5 150272853 Intergenic 7 2433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs4958426 chr5 150278346 Intron 7 7926 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;1.0 FUNCTIONAL_SNP rs10041072 chr5 150259642 Intergenic 7 10778 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10078968 chr5 150244273 Intergenic 7 26147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.832;0.536 FUNCTIONAL_SNP rs1896707 chr5 150245129 Intergenic 7 25291 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.834;0.559 FUNCTIONAL_SNP rs1896708 chr5 150245076 Intergenic 7 25344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1896709 chr5 150245032 Intergenic 7 25388 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.834;0.559 FUNCTIONAL_SNP rs7709464 chr5 150269441 Intergenic 7 979 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11167515 chr5 150239471 Intergenic 7 30949 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;1.0 FUNCTIONAL_SNP rs11167519 chr5 150265407 Intergenic 7 5013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11167520 chr5 150265639 Intergenic 7 4781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs11958146 chr5 150254158 Intergenic 7 16262 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.867;0.577 FUNCTIONAL_SNP rs12054923 chr5 150249059 Intergenic 7 21361 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12656538 chr5 150251380 Intergenic 7 19040 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;1.0 FUNCTIONAL_SNP rs7732643 chr5 150261436 Intergenic 7 8984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10064334 chr5 150267567 Intergenic 7 2853 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11951694 chr5 150254338 Intergenic 7 16082 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.867;0.596 FUNCTIONAL_SNP rs12652003 chr5 150231945 Intergenic 7 38475 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;1.0 FUNCTIONAL_SNP rs11955172 chr5 150254378 Intergenic 7 16042 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.873;0.654 FUNCTIONAL_SNP rs11955174 chr5 150254391 Intergenic 7 16029 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.873;0.591 FUNCTIONAL_SNP rs2115069 chr5 150252365 Intergenic 7 18055 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2233287 chr5 150440097 Intron 5b ASSOCIATION 21750679 Systemic sclerosis 8.30102999566 TNIP1 FUNCTIONAL_SNP rs2042234 chr5 150439131 Intron 2b 966 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10057690 chr5 150445215 Intron 5a 5118 CEU:1.0;0.847 FUNCTIONAL_SNP rs17111708 chr5 150443507 Intron 5b 3410 CEU:1.0;0.879, YRI:1.0;0.94 FUNCTIONAL_SNP rs3792784 chr5 150455672 Intron 5b 15575 CEU:1.0;0.879, YRI:0.746;0.524 FUNCTIONAL_SNP rs3792785 chr5 150451650 Intron 7 11553 CEU:1.0;0.879, YRI:0.926;0.706 FUNCTIONAL_SNP rs6579837 chr5 150434894 Intron 7 5203 CEU:1.0;0.879, YRI:1.0;0.551 LEAD_SNP rs10036748 chr5 150458146 Intron 4 ASSOCIATION 19838193 Systemic lupus erythematosus 8.69897000434 TNIP1 FUNCTIONAL_SNP rs960709 chr5 150461049 Intron 4 2903 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 LEAD_SNP rs17728338 chr5 150478318 Intergenic 5b ASSOCIATION 19169254 Psoriasis 20.0 TNIP1 - ANXA6 LEAD_SNP rs170020 chr5 151344558 Intron 7 ASSOCIATION 21787189 Interstitial lung disease 5.39794000867 TRNAQ53P - NMUR2 LEAD_SNP rs1010254 chr5 151734109 Intergenic 7 ASSOCIATION 20395239 Optic disc size (cup) 5.09691001301 TRNAQ53P - NMUR2 FUNCTIONAL_SNP rs7703937 chr5 151729454 Intergenic 4 4655 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.774 FUNCTIONAL_SNP rs6870816 chr5 151734701 Intergenic 6 592 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4958529 chr5 151727891 Intergenic 6 6218 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs17113138 chr5 151731277 Intergenic 7 2832 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.767 FUNCTIONAL_SNP rs6870097 chr5 151734471 Intergenic 7 362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2348646 chr5 151696874 Intergenic 7 37235 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.767 FUNCTIONAL_SNP rs2348647 chr5 151714361 Intergenic 7 19748 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.767 FUNCTIONAL_SNP rs1035400 chr5 151709900 Intergenic 7 24209 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.767 FUNCTIONAL_SNP rs6896780 chr5 151735124 Intergenic 7 1015 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7737302 chr5 151708019 Intergenic 7 26090 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs6876461 chr5 151719391 Intergenic 7 14718 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs17446828 chr5 151731007 Intergenic 7 3102 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13357566 chr5 151696166 Intergenic 7 37943 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 LEAD_SNP rs12658202 chr5 152979554 Intron 7 ASSOCIATION 19260139 Anthropometric traits 5.04575749056 GRIA1 LEAD_SNP rs12189362 chr5 153057548 Intron 7 ASSOCIATION 21658281 Sudden cardiac arrest 9.52287874528 GRIA1 FUNCTIONAL_SNP rs7715366 chr5 153055740 Intron 6 1808 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.744 FUNCTIONAL_SNP rs17594729 chr5 153063802 Intron 6 6254 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs2033195 chr5 153509596 Intron 5b ASSOCIATION 21701570 Body mass index 5.22184874962 MFAP3 - GALNT10 FUNCTIONAL_SNP rs10055843 chr5 153497400 Intron 5b 12196 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6890277 chr5 153512400 Intron 5b 2804 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12054772 chr5 153509357 Intron 7 239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 LEAD_SNP rs13165478 chr5 153869040 Intergenic 7 ASSOCIATION 21076409 Ventricular conduction 13.15490196 HAND1 - LARP1 FUNCTIONAL_SNP rs13185595 chr5 153872170 Intergenic 5a 3130 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4704970 chr5 155500992 Intron 7 ASSOCIATION 19010793 Multiple sclerosis (age of onset) 5.15490195999 PPIGP1 - SGCD LEAD_SNP rs157350 chr5 156139569 Intron 7 ASSOCIATION 19260139 Anthropometric traits 5.22184874962 SGCD ASSOCIATION 19260139 Anthropometric traits 5.39794000867 SGCD LEAD_SNP rs1501908 chr5 156398169 Intergenic 6 ASSOCIATION 19060906 LDL cholesterol 11.0 TIMD4 - HAVCR1 FUNCTIONAL_SNP rs12657266 chr5 156396003 Intergenic 6 2166 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs6874202 chr5 156391628 Intergenic 7 6541 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 LEAD_SNP rs411174 chr5 156609000 Intron 6 ASSOCIATION 21368711 Personality dimensions 6.0 ITK FUNCTIONAL_SNP rs246873 chr5 156600809 Intergenic 7 8191 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 LEAD_SNP rs2277027 chr5 156932376 Intron 6 ASSOCIATION 20010835 Pulmonary function 10.0 ADAM19 FUNCTIONAL_SNP rs1422795 chr5 156936364 Coding 5b 3988 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4579242 chr5 156939498 Intron 4 7122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs11134779 chr5 156936766 Intron 5b 4390 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10078178 chr5 156932984 Intron 5b 608 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4331881 chr5 156944475 Intron 6 12099 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs10866659 chr5 156937043 Intron 7 4667 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11740562 chr5 156942285 Intron 5a ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.0 ADAM19 FUNCTIONAL_SNP rs11749762 chr5 156901615 Exon,non-coding 7 40670 CEU:1.0;0.848 FUNCTIONAL_SNP rs10476052 chr5 156900534 Exon,non-coding 2b 41751 CEU:1.0;0.848 FUNCTIONAL_SNP rs11134766 chr5 156908317 Exon,non-coding 5b 33968 CEU:1.0;0.848 FUNCTIONAL_SNP rs11739062 chr5 156901701 Exon,non-coding 7 40584 CEU:1.0;0.848 FUNCTIONAL_SNP rs9313608 chr5 156900047 Exon,non-coding 6 42238 CEU:1.0;0.848 FUNCTIONAL_SNP rs10476050 chr5 156898874 Intron 4 43411 CEU:1.0;0.848 FUNCTIONAL_SNP rs11745566 chr5 156891953 Intron 4 50332 CEU:1.0;0.848 FUNCTIONAL_SNP rs11466784 chr5 156921651 Intron 4 20634 CEU:1.0;0.848 FUNCTIONAL_SNP rs11466807 chr5 156914928 Intron 5b 27357 CEU:1.0;0.848 FUNCTIONAL_SNP rs11744671 chr5 156921231 Intron 7 21054 CEU:1.0;1.0 LEAD_SNP rs1473247 chr5 158603571 Intron 7 ASSOCIATION 19820697 Mean platelet volume 6.52287874528 RNF145 FUNCTIONAL_SNP rs6556405 chr5 158635102 Exon,non-coding 4 31531 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs7719425 chr5 158670938 Intron 6 67367 CEU:1.0;0.838, CHB:1.0;0.896, JPT:1.0;0.952 FUNCTIONAL_SNP rs6888950 chr5 158624751 Intron 6 21180 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.677 FUNCTIONAL_SNP rs1897565 chr5 158618265 Intron 6 14694 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.535 FUNCTIONAL_SNP rs7715173 chr5 158664631 Intron 6 61060 CEU:1.0;0.838, CHB:1.0;0.896, JPT:1.0;0.952 FUNCTIONAL_SNP rs17056626 chr5 158656641 Intron 6 53070 CEU:1.0;0.89, CHB:1.0;0.896, JPT:1.0;0.95 FUNCTIONAL_SNP rs10076782 chr5 158604963 Intron 7 1392 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2082412 chr5 158717789 Intergenic 5b ASSOCIATION 19169254 Psoriasis 27.6989700043 UBLCP1 - IL12B FUNCTIONAL_SNP rs6859018 chr5 158736992 Intergenic 5b 19203 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs10056599 chr5 158722910 Intergenic 6 5121 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7730390 chr5 158730792 Intergenic 7 13003 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs10072923 chr5 158735776 Intergenic 7 17987 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3213094 chr5 158750769 Intron 7 ASSOCIATION 20953190 Psoriasis 10.3010299957 IL12B ASSOCIATION 19169255 Psoriasis 25.5228787453 IL12B FUNCTIONAL_SNP rs3212227 chr5 158742950 Exon,non-coding 7 7819 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3212220 chr5 158754195 Intron 4 3426 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4921442 chr5 158694100 Intron 5a 56669 CEU:1.0;0.94, YRI:0.893;0.688 FUNCTIONAL_SNP rs6859018 chr5 158736992 Intergenic 5b 13777 CEU:1.0;1.0, CHB:0.902;0.813, JPT:1.0;0.953, YRI:0.906;0.72 FUNCTIONAL_SNP rs2082412 chr5 158717789 Intergenic 5b 32980 CEU:1.0;1.0, CHB:0.895;0.728, JPT:1.0;1.0, YRI:0.906;0.72 FUNCTIONAL_SNP rs10056599 chr5 158722910 Intergenic 6 27859 CEU:1.0;1.0, CHB:0.895;0.728, JPT:1.0;1.0, YRI:0.906;0.72 FUNCTIONAL_SNP rs3212218 chr5 158754596 Intron 6 3827 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7730390 chr5 158730792 Intergenic 7 19977 CEU:1.0;1.0, CHB:0.898;0.77, JPT:1.0;1.0, YRI:0.898;0.671 FUNCTIONAL_SNP rs10072923 chr5 158735776 Intergenic 7 14993 CEU:1.0;1.0, CHB:0.902;0.813, JPT:1.0;1.0, YRI:0.906;0.72 FUNCTIONAL_SNP rs2421047 chr5 158746307 Intron 7 4462 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs3212217 chr5 158755130 Intron 7 4361 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.912 FUNCTIONAL_SNP rs3212219 chr5 158754461 Intron 7 3692 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2288831 chr5 158750013 Intron 7 756 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6894567 chr5 158756968 Intron 7 6199 CEU:1.0;0.943, CHB:0.948;0.818, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs3213097 chr5 158748679 Intron 7 2090 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2546890 chr5 158759900 Exon,non-coding 4 ASSOCIATION 20953188 Psoriasis 20.0 IL12B - ADRA1B LEAD_SNP rs10045431 chr5 158814533 Intergenic 7 ASSOCIATION 20570966 Crohn's disease 7.15490195999 IL12B - ADRA1B ASSOCIATION 18587394 Crohn's disease 12.3979400087 IL12B - ADRA1B FUNCTIONAL_SNP rs4244437 chr5 158773117 Intron 5b 41416 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;0.864, YRI:1.0;0.867 FUNCTIONAL_SNP rs4921484 chr5 158769753 Intron 6 44780 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864, YRI:1.0;0.849 FUNCTIONAL_SNP rs6556416 chr5 158818745 Intergenic 7 4212 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;0.779, YRI:1.0;0.64 FUNCTIONAL_SNP rs983825 chr5 158774965 Intron 7 39568 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;0.867 LEAD_SNP rs6556416 chr5 158818745 Intergenic 7 ASSOCIATION 21743469 Ankylosing spondylitis 7.69897000434 IL12B - ADRA1B FUNCTIONAL_SNP rs4244437 chr5 158773117 Intron 5b 45628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.675, YRI:1.0;0.587 FUNCTIONAL_SNP rs4921484 chr5 158769753 Intron 6 48992 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.675, YRI:1.0;0.557 FUNCTIONAL_SNP rs983825 chr5 158774965 Intron 7 43780 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.674, YRI:1.0;0.587 FUNCTIONAL_SNP rs10045431 chr5 158814533 Intergenic 7 4212 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;0.779, YRI:1.0;0.64 LEAD_SNP rs6887695 chr5 158822645 Intergenic 7 ASSOCIATION 17554261 Crohn's disease 5.04575749056 IL12B - ADRA1B FUNCTIONAL_SNP rs4379175 chr5 158804928 Intergenic 4 17717 CEU:1.0;0.955, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7704367 chr5 158821493 Intergenic 5a 1152 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.959;0.919 FUNCTIONAL_SNP rs12522665 chr5 158818240 Intergenic 7 4405 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6871626 chr5 158826792 Intergenic 6 ASSOCIATION 21297633 Ulcerative colitis 21.0 IL12B - ADRA1B LEAD_SNP rs12188300 chr5 158829527 Intergenic 4 ASSOCIATION 20953186 Psoriatic arthritis 16.15490196 IL12B - ADRA1B LEAD_SNP rs2431697 chr5 159879978 Intergenic 4 ASSOCIATION 21408207 Systemic lupus erythematosus 5.69897000434 PTTG1 - ATP10B LEAD_SNP rs6556756 chr5 163889280 Intron 7 ASSOCIATION 17903305 Breast cancer 6.30102999566 MAT2B - RPS15P6 FUNCTIONAL_SNP rs10476473 chr5 163883155 Intron 6 6125 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs7719008 chr5 163878862 Intron 6 10418 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs958994 chr5 165063884 Intron 5b ASSOCIATION 20009918 Carotid atherosclerosis in HIV infection 5.09691001301 RPS15P6 - RPL21P59 FUNCTIONAL_SNP rs10041088 chr5 165067818 Intron 6 3934 CEU:1.0;0.916, CHB:1.0;0.595, JPT:1.0;0.708, YRI:0.94;0.834 FUNCTIONAL_SNP rs1549133 chr5 165067120 Intron 7 3236 CEU:1.0;0.957, CHB:1.0;0.534, JPT:1.0;0.708, YRI:0.94;0.834 LEAD_SNP rs9313296 chr5 165377699 Intergenic 7 ASSOCIATION 20966902 Waist circumference 5.22184874962 RPL21P59 - RPL7P20 ASSOCIATION 20966902 Weight 6.15490195999 RPL21P59 - RPL7P20 LEAD_SNP rs2122554 chr5 165957086 Intergenic 7 ASSOCIATION 20585324 Conduct disorder (symptom count) 5.52287874528 RPLP0P9 - ODZ2 LEAD_SNP rs17404956 chr5 166389493 Intergenic 5b ASSOCIATION 21441570 Diabetic retinopathy 6.0 RPLP0P9 - ODZ2 LEAD_SNP rs4282339 chr5 168256240 Intron 4 ASSOCIATION 20881960 Height 15.15490196 SLIT3 FUNCTIONAL_SNP rs2974438 chr5 168250903 Intron 7 5337 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;0.934 LEAD_SNP rs13156607 chr5 168899987 Intergenic 6 ASSOCIATION 20966902 Waist circumference 5.30102999566 SLIT3 - CCDC99 LEAD_SNP rs169082 chr5 169074056 Intron 2b ASSOCIATION 18464913 Protein quantitative trait loci 6.0 DOCK2 FUNCTIONAL_SNP rs264876 chr5 169075641 Intron 5b 1585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 LEAD_SNP rs11957313 chr5 169950394 Intron 4 ASSOCIATION 19010793 Normalized brain volume 5.04575749056 KCNIP1 LEAD_SNP rs254893 chr5 171076227 Intergenic 5b ASSOCIATION 19197348 Quantitative traits 5.22184874962 FGF18 - C5orf50 LEAD_SNP rs251253 chr5 172480336 Intergenic 5b ASSOCIATION 20062060 PR interval 12.0457574906 SNORA74B - C5orf41 FUNCTIONAL_SNP rs29778 chr5 172481089 Intergenic 4 753 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs427684 chr5 172492449 Intron 5b 12113 CEU:0.913;0.834, CHB:0.842;0.709, JPT:0.856;0.643, YRI:1.0;1.0 FUNCTIONAL_SNP rs2560325 chr5 172503464 Intron 6 23128 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs251251 chr5 172486169 Intron 6 5833 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs370164 chr5 172515643 Intron 6 35307 CEU:0.913;0.834, CHB:0.818;0.616, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs171725 chr5 172570220 Intergenic 6 89884 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;0.914 FUNCTIONAL_SNP rs29776 chr5 172481818 Intergenic 6 1482 CEU:1.0;0.958, CHB:0.926;0.857, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs251237 chr5 172543817 Intron 6 63481 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs166122 chr5 172548709 Intron 6 68373 CEU:0.913;0.834, CHB:0.842;0.709, JPT:0.86;0.739, YRI:1.0;0.956 FUNCTIONAL_SNP rs1002620 chr5 172511337 Intron 6 31001 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs807428 chr5 172530477 Intron 7 50141 CEU:0.909;0.827, CHB:0.849;0.72, JPT:0.858;0.736, YRI:1.0;1.0 FUNCTIONAL_SNP rs3131913 chr5 172558196 Intron 7 77860 CEU:0.913;0.834, CHB:0.838;0.652, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs3095842 chr5 172501986 Intron 7 21650 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs251234 chr5 172531863 Intron 7 51527 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs793356 chr5 172530561 Intron 7 50225 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs251236 chr5 172534680 Intron 7 54344 CEU:0.908;0.824, CHB:0.838;0.652, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs251240 chr5 172508110 Intron 7 27774 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs251243 chr5 172500575 Intron 7 20239 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs251248 chr5 172487118 Intron 7 6782 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs3097320 chr5 172501973 Intron 7 21637 CEU:0.913;0.834, CHB:0.85;0.722, JPT:0.86;0.74, YRI:1.0;1.0 LEAD_SNP rs7722022 chr5 172934898 Intergenic 7 ASSOCIATION 19165155 Adiponectin levels 5.04575749056 STC2 - BOD1 FUNCTIONAL_SNP rs6898930 chr5 172934387 Intergenic 7 511 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.853, YRI:1.0;1.0 LEAD_SNP rs889014 chr5 172984114 Intergenic 5b ASSOCIATION 20881960 Height 15.0457574906 STC2 - BOD1 FUNCTIONAL_SNP rs7704555 chr5 173000002 Exon,non-coding 4 15888 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7733195 chr5 172994624 Intron 4 10510 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6885032 chr5 172983279 Intergenic 7 835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.953;0.623 FUNCTIONAL_SNP rs12517986 chr5 172995160 Intron 7 11046 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs359457 chr5 173279842 Intergenic 6 ASSOCIATION 21102463 Crohn's disease 11.5228787453 BOD1 - CPEB4 FUNCTIONAL_SNP rs359431 chr5 173288534 Intergenic 6 8692 CEU:1.0;0.959, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.841 FUNCTIONAL_SNP rs359456 chr5 173279808 Intergenic 6 34 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6861681 chr5 173362458 Intron 6 ASSOCIATION 20935629 Waist-hip ratio 8.69897000434 CPEB4 FUNCTIONAL_SNP rs1976074 chr5 173384663 Exon,non-coding 5a 22205 CEU:0.94;0.884, CHB:1.0;0.877, JPT:1.0;0.846 FUNCTIONAL_SNP rs17696407 chr5 173387335 Exon,non-coding 6 24877 CEU:0.94;0.884, CHB:1.0;0.863, JPT:1.0;0.845 FUNCTIONAL_SNP rs1564823 chr5 173383194 Exon,non-coding 6 20736 CEU:0.939;0.881, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs966544 chr5 173350405 Intron 4 12053 CEU:0.939;0.881, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs747472 chr5 173353514 Intron 4 8944 CEU:0.939;0.881, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs6864880 chr5 173298226 Intergenic 5a 64232 CEU:0.939;0.881, CHB:1.0;1.0, JPT:1.0;0.74 FUNCTIONAL_SNP rs10516107 chr5 173348156 Intron 5b 14302 CEU:0.94;0.884, CHB:1.0;0.877, JPT:1.0;0.846 FUNCTIONAL_SNP rs7736263 chr5 173339222 Intron 5b 23236 CEU:0.939;0.881, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs1484803 chr5 173349840 Intron 6 12618 CEU:0.939;0.881, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs17695092 chr5 173337853 Intron 6 24605 CEU:0.939;0.881, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs7705502 chr5 173320815 Intron 6 41643 CEU:1.0;0.939, CHB:1.0;0.877, JPT:1.0;0.846 LEAD_SNP rs10475598 chr5 173648438 Intron 6 ASSOCIATION 21130836 Information processing speed 6.09691001301 HMP19 - GAPDHL16 FUNCTIONAL_SNP rs10476102 chr5 173648583 Intron 5b 145 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9313671 chr5 173646991 Intron 6 1447 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.632 FUNCTIONAL_SNP rs2217633 chr5 173643926 Intron 7 4512 CEU:1.0;0.906, CHB:0.942;0.841, JPT:1.0;0.861 FUNCTIONAL_SNP rs9313669 chr5 173646730 Intron 7 1708 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs4295404 chr5 173647712 Intron 7 726 CEU:1.0;0.906 FUNCTIONAL_SNP rs17077005 chr5 173646014 Intron 7 2424 CEU:1.0;0.853 LEAD_SNP rs365132 chr5 176378574 Coding 7 ASSOCIATION 19448621 Menarche and menopause (age at onset) 13.096910013 UIMC1 FUNCTIONAL_SNP rs1700490 chr5 176402401 Coding 7 23827 CEU:1.0;0.96, CHB:1.0;0.951, JPT:1.0;0.909, YRI:0.893;0.56 FUNCTIONAL_SNP rs251848 chr5 176492557 Exon,non-coding 6 113983 CEU:0.958;0.849, CHB:1.0;1.0, JPT:1.0;0.786, YRI:1.0;0.919 FUNCTIONAL_SNP rs353490 chr5 176433063 Intron 2b 54489 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs353478 chr5 176370988 Intron 4 7586 CEU:0.959;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs353493 chr5 176432585 Intron 4 54011 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs251844 chr5 176476605 Intron 5a 98031 CEU:0.959;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs353489 chr5 176461974 Intron 5a 83400 CEU:0.959;0.884, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs353467 chr5 176445698 Intergenic 5b 67124 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs353468 chr5 176445494 Intergenic 5b 66920 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.919 FUNCTIONAL_SNP rs353471 chr5 176363429 Intron 5b 15145 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs149307 chr5 176471591 Intron 5b 93017 CEU:0.959;0.884, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.919 FUNCTIONAL_SNP rs2456181 chr5 176450837 Intron 5b 72263 CEU:0.958;0.88, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.848 FUNCTIONAL_SNP rs402511 chr5 176434440 Intergenic 6 55866 CEU:1.0;0.96, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs6861925 chr5 176324729 Intron 6 53845 CEU:0.92;0.846, CHB:0.952;0.906, JPT:0.948;0.817, YRI:1.0;1.0 FUNCTIONAL_SNP rs601923 chr5 176417386 Intron 7 38812 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.919 FUNCTIONAL_SNP rs2962842 chr5 176338955 Intron 7 39619 CEU:0.958;0.814, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs2292255 chr5 176334195 Intron 7 44379 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.907, YRI:1.0;1.0 FUNCTIONAL_SNP rs2292256 chr5 176333126 Intron 7 45448 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7718874 chr5 176358065 Intron 7 20509 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10068703 chr5 176377069 Intron 7 1505 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6420094 chr5 176817636 Intron 4 ASSOCIATION 20383146 Chronic kidney disease 14.0 SLC34A1 FUNCTIONAL_SNP rs3812035 chr5 176817143 Exon,non-coding 4 493 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7447593 chr5 176824137 Exon,non-coding 5b 6501 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;0.923 FUNCTIONAL_SNP rs6862195 chr5 176822512 Intron 5b 4876 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 LEAD_SNP rs2731672 chr5 176842474 Intergenic 6 ASSOCIATION 21546496 Platelet function and related traits 6.0 F12 - GRK6 ASSOCIATION 20303064 Activated partial thromboplastin time 29.6989700043 F12 - GRK6 FUNCTIONAL_SNP rs1801020 chr5 176836532 Exon,non-coding 4 5942 CEU:1.0;0.926, CHB:0.942;0.761, JPT:0.933;0.696, YRI:0.887;0.758 FUNCTIONAL_SNP rs2545801 chr5 176841339 Intergenic 5a 1135 CEU:1.0;1.0, CHB:0.942;0.761, JPT:1.0;0.759 LEAD_SNP rs10039254 chr5 178570914 Intron 7 ASSOCIATION 18937294 Attention deficit hyperactivity disorder (time to onset) 5.09691001301 ADAMTS2 LEAD_SNP rs13161895 chr5 179471201 Intron 6 ASSOCIATION 21347282 Coronary heart disease 6.22184874962 RNF130 FUNCTIONAL_SNP rs27012 chr5 179402211 Intron 2b 68990 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;0.856, YRI:1.0;1.0 FUNCTIONAL_SNP rs4129403 chr5 179476610 Intron 3a 5409 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3719 chr5 179435118 Intron 5a 36083 CEU:1.0;1.0, CHB:1.0;0.891, JPT:1.0;0.875, YRI:1.0;1.0 FUNCTIONAL_SNP rs3797763 chr5 179439516 Intron 5b 31685 CEU:1.0;1.0, CHB:1.0;0.886, JPT:1.0;0.868, YRI:1.0;1.0 FUNCTIONAL_SNP rs6873781 chr5 179436734 Intron 5b 34467 CEU:1.0;1.0, CHB:1.0;0.891, JPT:1.0;0.875, YRI:1.0;1.0 FUNCTIONAL_SNP rs6873994 chr5 179436696 Intron 5b 34505 CEU:1.0;1.0, CHB:1.0;0.891, JPT:1.0;0.875, YRI:1.0;1.0 FUNCTIONAL_SNP rs248320 chr5 179432096 Intron 6 39105 CEU:1.0;1.0, CHB:1.0;0.886, JPT:1.0;0.868, YRI:1.0;1.0 FUNCTIONAL_SNP rs864482 chr5 179427873 Intron 6 43328 CEU:1.0;1.0, CHB:1.0;0.886, JPT:1.0;0.868, YRI:1.0;1.0 FUNCTIONAL_SNP rs27018 chr5 179405144 Intron 7 66057 CEU:1.0;1.0, CHB:0.927;0.803, JPT:1.0;0.868, YRI:1.0;1.0 FUNCTIONAL_SNP rs17079966 chr5 179443190 Intron 7 28011 CEU:1.0;1.0, CHB:1.0;0.886, JPT:1.0;0.868, YRI:1.0;1.0 FUNCTIONAL_SNP rs3797764 chr5 179439345 Intron 7 31856 CEU:1.0;1.0, CHB:1.0;0.886, JPT:1.0;0.868, YRI:1.0;1.0 FUNCTIONAL_SNP rs248318 chr5 179430530 Intron 7 40671 CEU:1.0;1.0, CHB:1.0;0.891, JPT:1.0;0.87, YRI:1.0;1.0 LEAD_SNP rs10464059 chr5 179794208 Intergenic 7 ASSOCIATION 20070850 Parkinson's disease 5.52287874528 GFPT2 - CNOT6 FUNCTIONAL_SNP rs13355682 chr5 179791487 Intergenic 5b 2721 CEU:1.0;1.0, CHB:1.0;0.686, JPT:0.904;0.518, YRI:1.0;0.571 FUNCTIONAL_SNP rs1862326 chr5 179793256 Intergenic 5b 952 CEU:1.0;1.0, CHB:1.0;0.783, JPT:1.0;0.71, YRI:1.0;1.0 FUNCTIONAL_SNP rs12652232 chr5 179789391 Intergenic 5b 4817 CEU:1.0;0.938, CHB:1.0;0.687, JPT:1.0;0.648 FUNCTIONAL_SNP rs7703402 chr5 179787722 Intergenic 5b 6486 CEU:1.0;0.939, CHB:0.93;0.629 LEAD_SNP rs12517906 chr5 180170819 Intergenic 5b ASSOCIATION 19851299 Body mass index 5.22184874962 LOC100289003 ASSOCIATION 19851299 Weight 7.15490195999 LOC100289003 FUNCTIONAL_SNP rs17702447 chr5 180168265 Intergenic 6 2554 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs605721 chr5 180189920 Intergenic 6 19101 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10903267 chr5 180171716 Intergenic 7 897 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12719877 chr5 180171030 Intergenic 7 211 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11249745 chr5 180171399 Intergenic 7 580 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs619144 chr5 180182377 Intergenic 7 11558 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12514728 chr5 180177377 Intergenic 7 6558 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs655601 chr5 180226673 Intron 6 ASSOCIATION 19197348 Quantitative traits 5.30102999566 MGAT1 LEAD_SNP rs1279750 chr5 180595138 Intergenic 4 ASSOCIATION 21507922 Platelet counts 5.69897000434 TRNAL43P - TRIM7 LEAD_SNP rs1033180 chr6 383546 Intergenic 4 ASSOCIATION 20190752 Celiac disease 7.22184874962 DUSP22 - IRF4 FUNCTIONAL_SNP rs1877179 chr6 403604 Intergenic 4 20058 CEU:1.0;0.801 FUNCTIONAL_SNP rs1050975 chr6 408012 Intergenic 5a 24466 CEU:1.0;0.801 LEAD_SNP rs12203592 chr6 396321 Intergenic 2b ASSOCIATION 21685912 Progressive supranuclear palsy 14.2218487496 IRF4 ASSOCIATION 20585627 Eye color 14.6989700043 IRF4 ASSOCIATION 20585627 Freckling 90.6989700043 IRF4 ASSOCIATION 20585627 Hair color 6.39794000867 IRF4 ASSOCIATION 20585627 Hair color 27.6989700043 IRF4 ASSOCIATION 18483556 Black vs. blond hair color 126.15490196 IRF4 ASSOCIATION 18483556 Black vs. red hair color 27.0457574906 IRF4 LEAD_SNP rs872071 chr6 411064 Intergenic 4 ASSOCIATION 18758461 Chronic lymphocytic leukemia 19.6989700043 IRF4 LEAD_SNP rs9378805 chr6 417727 Intergenic 5b ASSOCIATION 21131588 Chronic lymphocytic leukemia 5.69897000434 IRF4 - EXOC2 LEAD_SNP rs1540771 chr6 466033 Intergenic 4 ASSOCIATION 17952075 Freckles 17.3979400087 IRF4 - EXOC2 LEAD_SNP rs12210050 chr6 475489 Intergenic 6 ASSOCIATION 21700618 Basal cell carcinoma (cutaneous) 9.0 IRF4 - EXOC2 ASSOCIATION 19340012 Tanning 13.3010299957 IRF4 - EXOC2 LEAD_SNP rs6918152 chr6 542159 Intergenic 7 ASSOCIATION 18483556 Black vs. blond hair color 7.22184874962 EXOC2 ASSOCIATION 18483556 Black vs. red hair color 6.30102999566 EXOC2 FUNCTIONAL_SNP rs9392056 chr6 518078 Intergenic 5a 24081 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4960043 chr6 534527 Intergenic 5b 7632 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6903640 chr6 528568 Intergenic 5b 13591 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9502893 chr6 1340189 Intergenic 7 ASSOCIATION 20686608 Pancreatic cancer 6.52287874528 FOXQ1 - FOXF2 FUNCTIONAL_SNP rs9502894 chr6 1340218 Intergenic 7 29 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9378688 chr6 2235633 Intergenic 7 ASSOCIATION 21502949 Caudate nucleus volume 5.22184874962 GMDS FUNCTIONAL_SNP rs9405550 chr6 2230064 Intergenic 2b 5569 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs3778568 chr6 2225680 Intergenic 4 9953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs3823287 chr6 2244721 Intergenic 4 9088 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9392374 chr6 2223002 Intergenic 5b 12631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs12661136 chr6 2227239 Intergenic 6 8394 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs2295008 chr6 2230989 Intergenic 6 4644 CEU:1.0;0.889, CHB:1.0;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs3800190 chr6 2229054 Intergenic 6 6579 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs9378686 chr6 2217173 Intergenic 7 18460 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs3800184 chr6 2211690 Intergenic 7 23943 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs3800185 chr6 2212169 Intergenic 7 23464 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs9378687 chr6 2218835 Intergenic 7 16798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941 LEAD_SNP rs4959235 chr6 3359337 Intergenic 5b ASSOCIATION 20921969 Antipsychotic-induced QTc interval prolongation 6.69897000434 SLC22A23 LEAD_SNP rs17309827 chr6 3433318 Intergenic 4 ASSOCIATION 21102463 Crohn's disease 8.15490195999 SLC22A23 FUNCTIONAL_SNP rs4959239 chr6 3418794 Intergenic 2b 14524 CEU:0.951;0.824, CHB:0.879;0.629, JPT:1.0;0.778 FUNCTIONAL_SNP rs9405640 chr6 3422318 Intergenic 3a 11000 CEU:1.0;0.916, CHB:1.0;0.901, JPT:0.946;0.85 FUNCTIONAL_SNP rs9405639 chr6 3419149 Intergenic 4 14169 CEU:0.954;0.832, CHB:0.879;0.629, JPT:1.0;0.785 FUNCTIONAL_SNP rs13204048 chr6 3420406 Intergenic 4 12912 CEU:0.955;0.873, CHB:1.0;0.901, JPT:0.95;0.902 FUNCTIONAL_SNP rs4959832 chr6 3435112 Intergenic 4 1794 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9378792 chr6 3421594 Intergenic 4 11724 CEU:1.0;0.91, CHB:1.0;0.897, JPT:1.0;0.947 FUNCTIONAL_SNP rs9405201 chr6 3424481 Intergenic 5a 8837 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs4959238 chr6 3418452 Intergenic 6 14866 CEU:1.0;0.875, CHB:0.871;0.613, JPT:1.0;0.785 FUNCTIONAL_SNP rs9405200 chr6 3421000 Intergenic 7 12318 CEU:0.955;0.872, CHB:1.0;0.901, JPT:1.0;0.949 FUNCTIONAL_SNP rs9328169 chr6 3420838 Intergenic 7 12480 CEU:0.913;0.833, CHB:1.0;0.901, JPT:1.0;0.952 FUNCTIONAL_SNP rs6939192 chr6 3430282 Intergenic 7 3036 CEU:0.95;0.903, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4959830 chr6 3434242 Intergenic 7 924 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6923735 chr6 3417643 Intergenic 7 15675 CEU:1.0;0.875, CHB:0.879;0.629, JPT:1.0;0.785 FUNCTIONAL_SNP rs9378791 chr6 3417689 Intergenic 7 15629 CEU:1.0;0.874, CHB:0.927;0.642, JPT:1.0;0.789 LEAD_SNP rs6942328 chr6 4512979 Intergenic 5b ASSOCIATION 21294900 Serum uric acid 6.0 PECI - KU-MEL-3 LEAD_SNP rs73717741 chr6 4874759 Intergenic 7 ASSOCIATION 21685187 Chronic obstructive pulmonary disease 6.52287874528 CDYL LEAD_SNP rs749005 chr6 6283666 Intergenic 7 ASSOCIATION 21116278 MRI atrophy measures 6.52287874528 F13A1 LEAD_SNP rs2326810 chr6 6612467 Intergenic 5b ASSOCIATION 20038947 Major depressive disorder (broad) 5.15490195999 LY86 LEAD_SNP rs1294421 chr6 6743149 Intergenic 5b ASSOCIATION 20935629 Waist-hip ratio 16.6989700043 LY86 - BTF3P7 LEAD_SNP rs675209 chr6 7102084 Intergenic 7 ASSOCIATION 20884846 Serum urate 9.0 BTF3P7 - RREB1 FUNCTIONAL_SNP rs1285875 chr6 7115927 Intergenic 7 13843 CEU:1.0;0.843, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs11755724 chr6 7118990 Intergenic 6 ASSOCIATION 20385826 Age-related macular degeneration 6.0 RREB1 FUNCTIONAL_SNP rs611555 chr6 7075822 Intergenic 5b 43168 CEU:0.951;0.824 FUNCTIONAL_SNP rs13213992 chr6 7083218 Intergenic 7 35772 CEU:0.946;0.809 LEAD_SNP rs12198986 chr6 7720059 Intergenic 7 ASSOCIATION 18391951 Height 10.6989700043 RPL29P1 - BMP6 FUNCTIONAL_SNP rs2327009 chr6 7718260 Intergenic 5a 1799 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13216054 chr6 7718590 Intergenic 6 1469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11243202 chr6 7719065 Intergenic 6 994 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2327010 chr6 7717073 Intergenic 6 2986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12194650 chr6 7720539 Intergenic 7 480 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs438259 chr6 9030336 Intergenic 6 ASSOCIATION 20732626 Attention deficit hyperactivity disorder 5.39794000867 HULC - OFCC1 FUNCTIONAL_SNP rs429460 chr6 9026525 Intergenic 5b 3811 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.878 FUNCTIONAL_SNP rs11243295 chr6 9026671 Intergenic 5b 3665 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.881 LEAD_SNP rs10484246 chr6 9451197 Intergenic 6 ASSOCIATION 17903295 Morbidity-free survival 7.09691001301 HULC - OFCC1 FUNCTIONAL_SNP rs9380624 chr6 9418725 Intergenic 5b 32472 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs9349224 chr6 9471146 Intergenic 5b 19949 CEU:0.905;0.82, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs11756620 chr6 9423799 Intergenic 6 27398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs2327168 chr6 9437498 Intergenic 7 13699 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9394703 chr6 9455062 Intergenic 7 3865 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9357302 chr6 9442605 Intergenic 7 8592 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13195786 chr6 10163968 Intergenic 2b ASSOCIATION 20705733 Serum calcium 5.15490195999 RPL7AP36 - RPL21P62 FUNCTIONAL_SNP rs12199092 chr6 10173273 Intergenic 5b 9305 CEU:1.0;1.0, CHB:1.0;0.694, JPT:1.0;0.655 FUNCTIONAL_SNP rs12208917 chr6 10175093 Intergenic 6 11125 CEU:1.0;1.0, CHB:1.0;0.694, JPT:1.0;0.655 FUNCTIONAL_SNP rs9368073 chr6 10171003 Intergenic 7 7035 CEU:1.0;1.0, CHB:1.0;0.693, JPT:1.0;0.655 LEAD_SNP rs2153157 chr6 10897488 Intergenic 6 ASSOCIATION 19448621 Menarche and menopause (age at onset) 7.30102999566 SYCP2L LEAD_SNP rs1040994 chr6 12197213 Intergenic 7 ASSOCIATION 19721433 Response to antipsychotic treatment 5.69897000434 HIVEP1 - EDN1 LEAD_SNP rs1332844 chr6 12889004 Intergenic 7 ASSOCIATION 21378988 Coronary heart disease 7.22184874962 PHACTR1 FUNCTIONAL_SNP rs9395214 chr6 12898884 Intergenic 6 9880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.545 FUNCTIONAL_SNP rs2876303 chr6 12919867 Intergenic 6 30863 CEU:0.956;0.914, CHB:1.0;1.0, JPT:1.0;0.603 FUNCTIONAL_SNP rs7750679 chr6 12891301 Intergenic 6 2297 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.925;0.825 FUNCTIONAL_SNP rs9369640 chr6 12901441 Intergenic 6 12437 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs6458545 chr6 12934302 Intergenic 6 45298 CEU:1.0;0.917 FUNCTIONAL_SNP rs4711863 chr6 12915417 Intergenic 6 26413 CEU:0.957;0.916 FUNCTIONAL_SNP rs9381500 chr6 12922535 Intergenic 6 33531 CEU:0.957;0.916 FUNCTIONAL_SNP rs9296512 chr6 12894904 Intergenic 7 5900 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;0.863, YRI:0.961;0.827 FUNCTIONAL_SNP rs7751826 chr6 12900977 Intergenic 7 11973 CEU:1.0;1.0, CHB:1.0;0.659 FUNCTIONAL_SNP rs7739181 chr6 12934687 Intergenic 7 45683 CEU:1.0;0.917 FUNCTIONAL_SNP rs1953088 chr6 12925936 Intergenic 7 36932 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;0.603 FUNCTIONAL_SNP rs2327621 chr6 12922689 Intergenic 7 33685 CEU:0.957;0.916 FUNCTIONAL_SNP rs1014342 chr6 12923157 Intergenic 7 34153 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;0.603 FUNCTIONAL_SNP rs4714955 chr6 12903435 Intergenic 7 14431 CEU:1.0;1.0 FUNCTIONAL_SNP rs7454157 chr6 12909874 Intergenic 7 20870 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.603 FUNCTIONAL_SNP rs8180558 chr6 12919989 Intergenic 7 30985 CEU:0.957;0.916 FUNCTIONAL_SNP rs4714990 chr6 12927845 Intergenic 7 38841 CEU:0.957;0.916 FUNCTIONAL_SNP rs12526453 chr6 12927544 Intergenic 7 38540 CEU:1.0;0.877 LEAD_SNP rs9349379 chr6 12903957 Intergenic 6 ASSOCIATION 21378988 Coronary heart disease 25.0457574906 PHACTR1 LEAD_SNP rs12526453 chr6 12927544 Intergenic 7 ASSOCIATION 21378990 Coronary heart disease 9.0 PHACTR1 ASSOCIATION 19198609 Myocardial infarction (early onset) 9.0 PHACTR1 FUNCTIONAL_SNP rs1332847 chr6 12892754 Intergenic 5b 34790 CEU:1.0;0.831 FUNCTIONAL_SNP rs9395214 chr6 12898884 Intergenic 6 28660 CEU:1.0;0.877 FUNCTIONAL_SNP rs2876303 chr6 12919867 Intergenic 6 7677 CEU:1.0;0.874 FUNCTIONAL_SNP rs7750679 chr6 12891301 Intergenic 6 36243 CEU:1.0;0.877 FUNCTIONAL_SNP rs6458545 chr6 12934302 Intergenic 6 6758 CEU:1.0;0.957 FUNCTIONAL_SNP rs9369640 chr6 12901441 Intergenic 6 26103 CEU:1.0;0.877 FUNCTIONAL_SNP rs13219256 chr6 12898292 Intergenic 6 29252 CEU:1.0;0.831 FUNCTIONAL_SNP rs9381500 chr6 12922535 Intergenic 6 5009 CEU:1.0;0.877 FUNCTIONAL_SNP rs9296512 chr6 12894904 Intergenic 7 32640 CEU:1.0;0.877 FUNCTIONAL_SNP rs7751826 chr6 12900977 Intergenic 7 26567 CEU:1.0;0.868 FUNCTIONAL_SNP rs7739181 chr6 12934687 Intergenic 7 7143 CEU:1.0;0.957, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs1953088 chr6 12925936 Intergenic 7 1608 CEU:1.0;0.877 FUNCTIONAL_SNP rs2327621 chr6 12922689 Intergenic 7 4855 CEU:1.0;0.877 FUNCTIONAL_SNP rs1014342 chr6 12923157 Intergenic 7 4387 CEU:1.0;0.877 FUNCTIONAL_SNP rs4714951 chr6 12897307 Intergenic 7 30237 CEU:1.0;0.831 FUNCTIONAL_SNP rs4714955 chr6 12903435 Intergenic 7 24109 CEU:1.0;0.84, YRI:0.886;0.641 FUNCTIONAL_SNP rs8180558 chr6 12919989 Intergenic 7 7555 CEU:1.0;0.877 FUNCTIONAL_SNP rs7454157 chr6 12909874 Intergenic 7 17670 CEU:1.0;0.877 FUNCTIONAL_SNP rs1332844 chr6 12889004 Intergenic 7 38540 CEU:1.0;0.877 FUNCTIONAL_SNP rs1332845 chr6 12892456 Intergenic 7 35088 CEU:1.0;0.831 FUNCTIONAL_SNP rs4714990 chr6 12927845 Intergenic 7 301 CEU:1.0;0.877 LEAD_SNP rs4715166 chr6 13216058 Intergenic 7 ASSOCIATION 17903296 Hip geometry 5.52287874528 PHACTR1 FUNCTIONAL_SNP rs4715167 chr6 13220322 Intergenic 7 4264 CEU:1.0;0.918, CHB:1.0;0.846, JPT:1.0;0.941, YRI:1.0;1.0 LEAD_SNP rs499818 chr6 13332467 Intergenic 5b ASSOCIATION 17903304 Major CVD 5.15490195999 TBC1D7 - GFOD1 LEAD_SNP rs6914079 chr6 14596365 Intergenic 7 ASSOCIATION 17903297 Cognitive test performance 5.69897000434 CD83 - RPL6P17 FUNCTIONAL_SNP rs9476590 chr6 14579335 Intergenic 5a 17030 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs7768617 chr6 14586821 Intergenic 5b 9544 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs7747783 chr6 14586774 Intergenic 5b 9591 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs2327825 chr6 14593748 Intergenic 5b 2617 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9349952 chr6 14586161 Intergenic 5b 10204 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1418176 chr6 14584041 Intergenic 5b 12324 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs7764429 chr6 14595437 Intergenic 5b 928 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7746014 chr6 14595395 Intergenic 5b 970 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9382983 chr6 14579688 Intergenic 6 16677 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12200652 chr6 14591024 Intergenic 6 5341 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs9358039 chr6 14572959 Intergenic 6 23406 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7756127 chr6 14590753 Intergenic 6 5612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6901145 chr6 14593914 Intergenic 6 2451 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8180641 chr6 14585826 Intergenic 6 10539 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1418179 chr6 14583679 Intergenic 6 12686 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.913 FUNCTIONAL_SNP rs6459366 chr6 14584396 Intergenic 6 11969 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs4282400 chr6 14588001 Intergenic 7 8364 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9296941 chr6 14582504 Intergenic 7 13861 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs9296942 chr6 14582693 Intergenic 7 13672 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs9296943 chr6 14582770 Intergenic 7 13595 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs9296944 chr6 14582828 Intergenic 7 13537 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs7770700 chr6 14590906 Intergenic 7 5459 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7771744 chr6 14591529 Intergenic 7 4836 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1935310 chr6 14576839 Intergenic 7 19526 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.84 FUNCTIONAL_SNP rs10949251 chr6 14588105 Intergenic 7 8260 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10949252 chr6 14588319 Intergenic 7 8046 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9370762 chr6 14581298 Intergenic 7 15067 CEU:1.0;0.94, CHB:1.0;0.93, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs9370766 chr6 14585908 Intergenic 7 10457 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12214552 chr6 14590997 Intergenic 7 5368 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2327835 chr6 14570894 Intergenic 7 25471 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1891278 chr6 14597288 Intergenic 7 923 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2327822 chr6 14577204 Intergenic 7 19161 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12214547 chr6 14590971 Intergenic 7 5394 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6932767 chr6 14595873 Intergenic 7 492 CEU:1.0;0.94, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9396525 chr6 14595092 Intergenic 7 1273 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6911284 chr6 14592739 Intergenic 7 3626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1418169 chr6 14590401 Intergenic 7 5964 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1418170 chr6 14590375 Intergenic 7 5990 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1418171 chr6 14590231 Intergenic 7 6134 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1418177 chr6 14583876 Intergenic 7 12489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs9382988 chr6 14595010 Intergenic 7 1355 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1891279 chr6 14597215 Intergenic 7 850 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7769056 chr6 14580940 Intergenic 7 15425 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6459365 chr6 14584351 Intergenic 7 12014 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs9476600 chr6 14589188 Intergenic 7 7177 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9476601 chr6 14589234 Intergenic 7 7131 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7770731 chr6 14598820 Intergenic 2b ASSOCIATION 21107309 Working memory 6.0 CD83 - RPL6P17 LEAD_SNP rs6941421 chr6 15089151 Intergenic 2b ASSOCIATION 19010793 Multiple sclerosis (severity) 5.22184874962 CD83 - RPL6P17 FUNCTIONAL_SNP rs1884120 chr6 15107204 Intergenic 4 18053 CEU:1.0;0.953, CHB:1.0;0.947, JPT:0.937;0.828, YRI:1.0;1.0 FUNCTIONAL_SNP rs12175033 chr6 15105122 Intergenic 5b 15971 CEU:1.0;0.953, CHB:1.0;0.947, JPT:0.937;0.828, YRI:1.0;0.953 FUNCTIONAL_SNP rs4712249 chr6 15087898 Intergenic 5b 1253 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs1114634 chr6 15101261 Intergenic 7 12110 CEU:1.0;0.953, CHB:0.94;0.884, JPT:0.941;0.885, YRI:1.0;0.829 FUNCTIONAL_SNP rs9370792 chr6 15099585 Intergenic 7 10434 CEU:1.0;0.953, CHB:0.944;0.891, JPT:0.941;0.885, YRI:1.0;0.829 FUNCTIONAL_SNP rs9367862 chr6 15116001 Intergenic 7 26850 CEU:1.0;0.953, CHB:1.0;0.947, JPT:0.941;0.885, YRI:1.0;0.829 FUNCTIONAL_SNP rs7747995 chr6 15091074 Intergenic 7 1923 CEU:1.0;0.951, CHB:1.0;0.945, JPT:0.941;0.885, YRI:1.0;0.867 LEAD_SNP rs2142672 chr6 16197194 Intergenic 5b ASSOCIATION 20864672 LDL cholesterol 7.69897000434 MRPL42P2 - GMPR FUNCTIONAL_SNP rs13206249 chr6 16175022 Intergenic 2b 22172 CEU:1.0;0.823 FUNCTIONAL_SNP rs9383120 chr6 16192025 Intergenic 3a 5169 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9370870 chr6 16196759 Intergenic 5a 435 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs6459452 chr6 16187522 Intergenic 5a 9672 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs6459451 chr6 16187335 Intergenic 6 9859 CEU:1.0;1.0, CHB:1.0;0.506 FUNCTIONAL_SNP rs7760540 chr6 16193416 Intergenic 7 3778 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2327951 chr6 16195308 Intergenic 7 1886 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 LEAD_SNP rs697739 chr6 16742033 Intergenic 5b ASSOCIATION 19451621 Amyotrophic lateral sclerosis 5.39794000867 ATXN1 LEAD_SNP rs12199222 chr6 17699322 Intergenic 4 ASSOCIATION 18391951 Height 6.15490195999 NUP153 FUNCTIONAL_SNP rs6906499 chr6 17665479 Intergenic 5b 33843 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10949436 chr6 17679707 Intergenic 7 19615 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 LEAD_SNP rs41441749 chr6 18791723 Intergenic 7 ASSOCIATION 18821565 Hyperactive-impulsive symptoms 6.0 RNF144B - RPL21P61 LEAD_SNP rs16883019 chr6 19969638 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 6.15490195999 ID4 - RPL29P17 FUNCTIONAL_SNP rs2744344 chr6 19954698 Intergenic 5a 14940 CEU:1.0;1.0, CHB:1.0;0.898, JPT:1.0;0.94 FUNCTIONAL_SNP rs16882922 chr6 19911852 Intergenic 5a 57786 CEU:1.0;1.0, CHB:0.874;0.649, JPT:0.935;0.821 FUNCTIONAL_SNP rs2143046 chr6 19948028 Intergenic 5a 21610 CEU:1.0;1.0, CHB:1.0;0.794, JPT:1.0;0.93, YRI:1.0;0.607 FUNCTIONAL_SNP rs16883016 chr6 19969480 Intergenic 5a 158 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs994646 chr6 19922050 Intergenic 5a 47588 CEU:1.0;1.0, CHB:0.874;0.649, JPT:0.935;0.821, YRI:1.0;0.606 FUNCTIONAL_SNP rs6917226 chr6 19946615 Intergenic 5a 23023 CEU:1.0;1.0, CHB:1.0;0.903, JPT:0.938;0.747 FUNCTIONAL_SNP rs2744338 chr6 19957282 Intergenic 6 12356 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs7768737 chr6 19920904 Intergenic 6 48734 CEU:1.0;1.0, CHB:0.894;0.542, JPT:1.0;0.912 FUNCTIONAL_SNP rs12661503 chr6 19915326 Intergenic 6 54312 CEU:1.0;1.0, CHB:0.879;0.693, JPT:0.94;0.834 FUNCTIONAL_SNP rs1931778 chr6 19961474 Intergenic 7 8164 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs2744358 chr6 19942797 Intergenic 7 26841 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;0.944 FUNCTIONAL_SNP rs16883021 chr6 19969712 Intergenic 7 74 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6936399 chr6 19909241 Intergenic 7 60397 CEU:1.0;1.0, CHB:0.823;0.581, JPT:0.826;0.682 FUNCTIONAL_SNP rs1079801 chr6 19945285 Intergenic 7 24353 CEU:1.0;1.0, CHB:1.0;0.898, JPT:0.933;0.729, YRI:0.863;0.655 FUNCTIONAL_SNP rs1931773 chr6 19909736 Intergenic 7 59902 CEU:1.0;1.0, CHB:0.877;0.625, JPT:0.939;0.833 LEAD_SNP rs1202199 chr6 20156174 Intergenic 7 ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.04575749056 MBOAT1 LEAD_SNP rs9295474 chr6 20652717 Intergenic 2c ASSOCIATION 21490949 Type 2 diabetes 5.04575749056 CDKAL1 LEAD_SNP rs4712523 chr6 20657564 Intergenic 4 ASSOCIATION 19734900 Type 2 diabetes and other traits 11.6989700043 CDKAL1 ASSOCIATION 19401414 Type 2 diabetes 19.15490196 CDKAL1 FUNCTIONAL_SNP rs9295474 chr6 20652717 Intergenic 2c 4847 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10946398 chr6 20661034 Intergenic 5b 3470 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs6456367 chr6 20659587 Intergenic 6 2023 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs6456368 chr6 20659806 Intergenic 6 2242 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs4712525 chr6 20662966 Intergenic 6 5402 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs7774594 chr6 20661143 Intergenic 6 3579 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs9358356 chr6 20667382 Intergenic 7 9818 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.727 FUNCTIONAL_SNP rs4712522 chr6 20656800 Intergenic 7 764 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs7752780 chr6 20666022 Intergenic 7 8458 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs4712526 chr6 20663035 Intergenic 7 5471 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs7754840 chr6 20661250 Intergenic 7 3686 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs7752906 chr6 20666055 Intergenic 7 8491 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs7748382 chr6 20665549 Intergenic 7 7985 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.877 FUNCTIONAL_SNP rs9460544 chr6 20661529 Intergenic 7 3965 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs9460545 chr6 20661550 Intergenic 7 3986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs9460546 chr6 20663632 Intergenic 7 6068 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs7772603 chr6 20665946 Intergenic 7 8382 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4712524 chr6 20657865 Intergenic 5b ASSOCIATION 18711366 Type 2 diabetes 9.52287874528 CDKAL1 LEAD_SNP rs10946398 chr6 20661034 Intergenic 5b ASSOCIATION 19056611 Type 2 diabetes 6.15490195999 CDKAL1 ASSOCIATION 17463249 Type 2 diabetes 8.0 CDKAL1 FUNCTIONAL_SNP rs4712523 chr6 20657564 Intergenic 4 3470 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs6456367 chr6 20659587 Intergenic 6 1447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6456368 chr6 20659806 Intergenic 6 1228 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4712525 chr6 20662966 Intergenic 6 1932 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7774594 chr6 20661143 Intergenic 6 109 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4712522 chr6 20656800 Intergenic 7 4234 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7752780 chr6 20666022 Intergenic 7 4988 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4712526 chr6 20663035 Intergenic 7 2001 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7754840 chr6 20661250 Intergenic 7 216 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7752906 chr6 20666055 Intergenic 7 5021 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7748382 chr6 20665549 Intergenic 7 4515 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.92 FUNCTIONAL_SNP rs9460544 chr6 20661529 Intergenic 7 495 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9460545 chr6 20661550 Intergenic 7 516 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9460546 chr6 20663632 Intergenic 7 2598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7754840 chr6 20661250 Intergenic 7 ASSOCIATION 17463246 Type 2 diabetes 10.3979400087 CDKAL1 ASSOCIATION 17463248 Type 2 diabetes 10.3979400087 CDKAL1 FUNCTIONAL_SNP rs4712523 chr6 20657564 Intergenic 4 3686 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs10946398 chr6 20661034 Intergenic 5b 216 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6456367 chr6 20659587 Intergenic 6 1663 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6456368 chr6 20659806 Intergenic 6 1444 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4712525 chr6 20662966 Intergenic 6 1716 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7774594 chr6 20661143 Intergenic 6 107 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4712522 chr6 20656800 Intergenic 7 4450 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7752780 chr6 20666022 Intergenic 7 4772 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4712526 chr6 20663035 Intergenic 7 1785 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7752906 chr6 20666055 Intergenic 7 4805 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7748382 chr6 20665549 Intergenic 7 4299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.92 FUNCTIONAL_SNP rs9460544 chr6 20661529 Intergenic 7 279 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9460545 chr6 20661550 Intergenic 7 300 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9460546 chr6 20663632 Intergenic 7 2382 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7756992 chr6 20679709 Intergenic 5a ASSOCIATION 17460697 Type 2 diabetes 8.09691001301 CDKAL1 LEAD_SNP rs10440833 chr6 20688121 Intergenic 6 ASSOCIATION 20581827 Type 2 diabetes 21.6989700043 CDKAL1 FUNCTIONAL_SNP rs7766070 chr6 20686573 Intergenic 3a 1548 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:0.926;0.632 FUNCTIONAL_SNP rs7756992 chr6 20679709 Intergenic 5a 8412 CEU:1.0;1.0, CHB:1.0;0.716, JPT:1.0;0.739 FUNCTIONAL_SNP rs9368222 chr6 20686996 Intergenic 6 1125 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.692 FUNCTIONAL_SNP rs6931514 chr6 20703952 Intergenic 7 15831 CEU:1.0;0.948, CHB:1.0;0.761, JPT:0.935;0.673, YRI:0.934;0.872 LEAD_SNP rs2206734 chr6 20694884 Intergenic 7 ASSOCIATION 21139019 Ileal carcinoids 5.09691001301 CDKAL1 FUNCTIONAL_SNP rs10946403 chr6 20717404 Intergenic 2b 22520 CEU:1.0;1.0, CHB:1.0;0.752, JPT:1.0;0.735 FUNCTIONAL_SNP rs9465871 chr6 20717255 Intergenic 4 22371 CEU:1.0;1.0, CHB:1.0;0.718, JPT:1.0;0.743 FUNCTIONAL_SNP rs9358357 chr6 20719145 Intergenic 4 24261 CEU:1.0;1.0, CHB:1.0;0.752, JPT:1.0;0.743 FUNCTIONAL_SNP rs9368224 chr6 20719232 Intergenic 4 24348 CEU:1.0;1.0, CHB:1.0;0.752, JPT:1.0;0.743 FUNCTIONAL_SNP rs6935599 chr6 20717095 Intergenic 5a 22211 CEU:1.0;1.0, CHB:1.0;0.752, JPT:1.0;0.743 FUNCTIONAL_SNP rs2328548 chr6 20716958 Intergenic 5a 22074 CEU:1.0;1.0, CHB:1.0;0.752, JPT:1.0;0.777 FUNCTIONAL_SNP rs9368226 chr6 20723057 Intergenic 6 28173 CEU:1.0;0.927, CHB:1.0;0.685, JPT:1.0;0.78 FUNCTIONAL_SNP rs7767391 chr6 20725240 Intergenic 6 30356 CEU:1.0;0.927, CHB:1.0;0.718, JPT:1.0;0.78 FUNCTIONAL_SNP rs11753081 chr6 20705590 Intergenic 7 10706 CEU:1.0;1.0, CHB:1.0;0.752, JPT:1.0;0.743 FUNCTIONAL_SNP rs9368219 chr6 20674691 Intergenic 7 20193 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1040558 chr6 20713706 Intergenic 7 18822 CEU:1.0;1.0, CHB:1.0;0.752, JPT:1.0;0.743 FUNCTIONAL_SNP rs9460550 chr6 20719561 Intergenic 7 24677 CEU:1.0;1.0, CHB:1.0;0.748, JPT:1.0;0.743 LEAD_SNP rs6931514 chr6 20703952 Intergenic 7 ASSOCIATION 18372903 Type 2 diabetes 11.0 CDKAL1 LEAD_SNP rs9465871 chr6 20717255 Intergenic 4 ASSOCIATION 17554300 Type 2 diabetes 6.52287874528 CDKAL1 FUNCTIONAL_SNP rs2328548 chr6 20716958 Intergenic 5a 297 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.925 LEAD_SNP rs6908425 chr6 20728731 Intergenic 6 ASSOCIATION 18587394 Crohn's disease 9.04575749056 CDKAL1 LEAD_SNP rs9466056 chr6 21384613 Intergenic 2b ASSOCIATION 21533022 Bone mineral density 5.39794000867 RPL36AP25 - SOX4 FUNCTIONAL_SNP rs6920208 chr6 21386879 Intergenic 5b 2266 CEU:1.0;1.0, CHB:0.948;0.854, JPT:1.0;0.785, YRI:1.0;0.849 FUNCTIONAL_SNP rs6940342 chr6 21381568 Intergenic 6 3045 CEU:1.0;1.0, CHB:1.0;0.817, JPT:1.0;0.908, YRI:1.0;0.853 FUNCTIONAL_SNP rs4712613 chr6 21378155 Intergenic 7 6458 CEU:1.0;1.0, CHB:0.944;0.766, JPT:1.0;0.953 LEAD_SNP rs4712653 chr6 22125964 Intergenic 7 ASSOCIATION 21124317 Neuroblastoma 16.096910013 FLJ22536 FUNCTIONAL_SNP rs9368402 chr6 22125157 Intergenic 5b 807 CEU:0.956;0.914, CHB:1.0;0.937, JPT:1.0;0.939, YRI:1.0;0.719 FUNCTIONAL_SNP rs6911827 chr6 22130601 Intergenic 6 4637 CEU:0.952;0.865, CHB:1.0;0.945, JPT:1.0;0.939, YRI:1.0;1.0 FUNCTIONAL_SNP rs7768871 chr6 22109189 Intergenic 7 16775 CEU:0.915;0.837, CHB:0.88;0.775, JPT:0.861;0.695 FUNCTIONAL_SNP rs6922033 chr6 22128438 Intergenic 7 2474 CEU:0.953;0.832, CHB:1.0;0.945, JPT:0.936;0.875, YRI:1.0;1.0 FUNCTIONAL_SNP rs6904385 chr6 22128938 Intergenic 7 2974 CEU:0.954;0.87, CHB:1.0;0.945, JPT:1.0;0.937, YRI:1.0;1.0 LEAD_SNP rs6939340 chr6 22140004 Intergenic 7 ASSOCIATION 18463370 Neuroblastoma 14.0457574906 FLJ22536 LEAD_SNP rs4236016 chr6 22246604 Intergenic 7 ASSOCIATION 21348951 Cardiac hypertrophy 5.39794000867 FLJ22536 - PRL LEAD_SNP rs1341239 chr6 22304204 Intergenic 5a ASSOCIATION 21623375 Paget's disease 5.39794000867 PRL - HDGFL1 FUNCTIONAL_SNP rs2655426 chr6 22307725 Intergenic 5b 3521 CEU:0.956;0.874, YRI:1.0;0.555 FUNCTIONAL_SNP rs849877 chr6 22298699 Intergenic 5b 5505 CEU:0.905;0.819 FUNCTIONAL_SNP rs2744116 chr6 22306047 Intergenic 7 1843 CEU:0.956;0.874, YRI:1.0;0.642 LEAD_SNP rs10498712 chr6 22743403 Intergenic 6 ASSOCIATION 19197348 Quantitative traits 5.04575749056 HDGFL1 - RPL6P18 FUNCTIONAL_SNP rs17272619 chr6 22741874 Intergenic 7 1529 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;0.825, YRI:0.916;0.839 LEAD_SNP rs6922632 chr6 24107093 Intergenic 5b ASSOCIATION 21130836 Information processing speed 5.39794000867 RPL6P18 - NRSN1 FUNCTIONAL_SNP rs6934526 chr6 24114746 Intergenic 6 7653 CEU:1.0;0.879, YRI:1.0;1.0 FUNCTIONAL_SNP rs1343625 chr6 24112737 Intergenic 7 5644 CEU:1.0;0.879, YRI:1.0;1.0 FUNCTIONAL_SNP rs6922290 chr6 24106947 Intergenic 7 146 CEU:1.0;0.89, YRI:1.0;0.722 LEAD_SNP rs793834 chr6 24234933 Intergenic 7 ASSOCIATION 21130836 Information processing speed 5.52287874528 DCDC2 LEAD_SNP rs9467160 chr6 24441746 Intergenic 4 ASSOCIATION 18940312 Plasma levels of liver enzymes 11.0 GPLD1 FUNCTIONAL_SNP rs9461011 chr6 24440351 Intergenic 5b 1395 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs9467161 chr6 24441963 Intergenic 5b 217 CEU:1.0;0.939, CHB:1.0;1.0 FUNCTIONAL_SNP rs7766620 chr6 24455543 Intergenic 5b 13797 CEU:0.937;0.826, CHB:1.0;0.79 FUNCTIONAL_SNP rs7762901 chr6 24449639 Intergenic 5b 7893 CEU:1.0;0.939, CHB:1.0;1.0 FUNCTIONAL_SNP rs9461012 chr6 24441844 Intergenic 5b 98 CEU:1.0;0.939, CHB:1.0;1.0 FUNCTIONAL_SNP rs6922631 chr6 24438734 Intergenic 6 3012 CEU:1.0;0.939, CHB:1.0;1.0 FUNCTIONAL_SNP rs9461010 chr6 24440206 Intergenic 6 1540 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6922313 chr6 24438719 Intergenic 6 3027 CEU:1.0;0.941, CHB:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs9295624 chr6 24439600 Intergenic 7 2146 CEU:1.0;0.939, CHB:1.0;1.0 FUNCTIONAL_SNP rs10946700 chr6 24442158 Intergenic 7 412 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9467166 chr6 24444435 Intergenic 7 2689 CEU:1.0;0.939, CHB:1.0;1.0 FUNCTIONAL_SNP rs17247566 chr6 24450404 Intergenic 7 8658 CEU:0.937;0.826, CHB:0.786;0.617 FUNCTIONAL_SNP rs13205577 chr6 24448648 Intergenic 7 6902 CEU:1.0;0.939, CHB:1.0;1.0 FUNCTIONAL_SNP rs10946702 chr6 24462672 Intergenic 7 20926 CEU:0.937;0.826, CHB:1.0;0.79 LEAD_SNP rs16889440 chr6 24544967 Exon,non-coding 5a ASSOCIATION 20923822 Radiation response 5.69897000434 KIAA0319 LEAD_SNP rs17419851 chr6 24749413 Intron 7 ASSOCIATION 21507922 Neutrophil count 5.04575749056 C6orf62 - GMNN LEAD_SNP rs2274089 chr6 25488583 Intron 4 ASSOCIATION 19084217 Serum markers of iron status 5.30102999566 LRRC16A ASSOCIATION 19084217 Serum markers of iron status 6.09691001301 LRRC16A ASSOCIATION 19084217 Serum markers of iron status 6.52287874528 LRRC16A LEAD_SNP rs742132 chr6 25607571 Intron 7 ASSOCIATION 19503597 Serum uric acid 8.04575749056 LRRC16A FUNCTIONAL_SNP rs10946785 chr6 25617068 Intron 3a 9497 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.887, YRI:0.952;0.793 FUNCTIONAL_SNP rs12183240 chr6 25624416 Intergenic 4 16845 CEU:0.95;0.822, CHB:1.0;0.884, JPT:1.0;0.936, YRI:0.936;0.54 FUNCTIONAL_SNP rs1980452 chr6 25630136 Intergenic 5a 22565 CEU:0.95;0.822, CHB:1.0;0.884, JPT:1.0;0.887 FUNCTIONAL_SNP rs3804105 chr6 25612683 Intron 5a 5112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.887, YRI:0.952;0.793 FUNCTIONAL_SNP rs150551 chr6 25533930 Intron 5b 73641 CEU:1.0;1.0, CHB:0.861;0.564, JPT:1.0;0.944 FUNCTIONAL_SNP rs2077393 chr6 25607365 Intron 6 206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1028318 chr6 25590224 Intron 6 17347 CEU:1.0;1.0, JPT:1.0;0.72 FUNCTIONAL_SNP rs1997672 chr6 25617544 Intron 6 9973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.938;0.829, YRI:0.952;0.793 FUNCTIONAL_SNP rs6903765 chr6 25609738 Intron 6 2167 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.887, YRI:0.952;0.793 FUNCTIONAL_SNP rs7761700 chr6 25618191 Intron 7 10620 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.887, YRI:0.952;0.793 FUNCTIONAL_SNP rs3804118 chr6 25592651 Intron 7 14920 CEU:1.0;1.0, CHB:0.929;0.623, JPT:1.0;0.944 FUNCTIONAL_SNP rs6908390 chr6 25609756 Intron 7 2185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.887, YRI:0.952;0.793 LEAD_SNP rs932316 chr6 25641200 Intergenic 7 ASSOCIATION 19084217 Serum markers of iron status 5.04575749056 LRRC16A - SCGN LEAD_SNP rs1165196 chr6 25813150 Coding 6 ASSOCIATION 20884846 Serum urate 24.3010299957 SLC17A1 FUNCTIONAL_SNP rs11754288 chr6 25776949 Coding 7 36201 CEU:1.0;0.961, CHB:1.0;0.904, JPT:1.0;1.0 FUNCTIONAL_SNP rs942379 chr6 25849620 Coding 5a 36470 CEU:0.956;0.841, CHB:0.902;0.813, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165215 chr6 25798932 Exon,non-coding 7 14218 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3799352 chr6 25822620 Intron 5a 9470 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165176 chr6 25830298 Intron 5a 17148 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs2762353 chr6 25794431 Intron 5b 18719 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6905614 chr6 25840485 Intergenic 5b 27335 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.684 FUNCTIONAL_SNP rs1165177 chr6 25829659 Intron 5b 16509 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1184804 chr6 25868226 Intron 6 55076 CEU:0.956;0.841, CHB:0.902;0.813, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1185978 chr6 25835895 Intergenic 6 22745 CEU:1.0;0.812, CHB:0.888;0.711, JPT:0.891;0.795 FUNCTIONAL_SNP rs13197601 chr6 25785935 Intron 6 27215 CEU:1.0;0.96, CHB:1.0;0.904, JPT:1.0;1.0 FUNCTIONAL_SNP rs1185569 chr6 25831603 Intron 6 18453 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs3799344 chr6 25786993 Intron 6 26157 CEU:0.96;0.922 FUNCTIONAL_SNP rs1165178 chr6 25827516 Intron 6 14366 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165205 chr6 25870542 Intron 6 57392 CEU:0.959;0.85, CHB:0.902;0.813, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs9393672 chr6 25842605 Intergenic 7 29455 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.684 FUNCTIONAL_SNP rs1184803 chr6 25834658 Intergenic 7 21508 CEU:1.0;0.918, CHB:1.0;0.896, JPT:1.0;0.915, YRI:1.0;0.792 FUNCTIONAL_SNP rs3757131 chr6 25783909 Intron 7 29241 CEU:1.0;0.96, CHB:0.902;0.813, JPT:1.0;1.0 FUNCTIONAL_SNP rs765285 chr6 25828242 Intron 7 15092 CEU:1.0;0.863, CHB:1.0;0.888, JPT:1.0;0.896, YRI:1.0;1.0 FUNCTIONAL_SNP rs1408273 chr6 25840946 Intergenic 7 27796 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.684 FUNCTIONAL_SNP rs1185567 chr6 25818588 Intron 7 5438 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1185568 chr6 25834428 Intergenic 7 21278 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs3757130 chr6 25770866 Intron 7 42284 CEU:1.0;0.961, CHB:1.0;0.904, JPT:1.0;1.0 FUNCTIONAL_SNP rs1165151 chr6 25821616 Intron 7 8466 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165152 chr6 25818766 Intron 7 5616 CEU:1.0;1.0, CHB:0.902;0.813, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs1165153 chr6 25817789 Intron 7 4639 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165160 chr6 25864456 Intron 7 51306 CEU:0.957;0.843, CHB:0.902;0.813, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165182 chr6 25837829 Intergenic 7 24679 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165207 chr6 25865266 Intron 7 52116 CEU:0.959;0.85, CHB:0.902;0.813, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165209 chr6 25801319 Intron 7 11831 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165213 chr6 25799676 Intron 7 13474 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1183200 chr6 25818646 Intron 7 5496 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1183201 chr6 25823444 Intron 7 10294 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 LEAD_SNP rs17270561 chr6 25820439 Intron 7 ASSOCIATION 19084217 Serum markers of iron status 6.30102999566 SLC17A1 LEAD_SNP rs17342717 chr6 25821770 Intron 7 ASSOCIATION 21208937 Serum iron levels 8.30102999566 SLC17A1 ASSOCIATION 21149283 Serum markers of iron status 9.04575749056 SLC17A1 ASSOCIATION 20927387 Red blood cell traits 7.30102999566 SLC17A1 LEAD_SNP rs1183201 chr6 25823444 Intron 7 ASSOCIATION 19503597 Serum uric acid 13.5228787453 SLC17A1 FUNCTIONAL_SNP rs11754288 chr6 25776949 Coding 7 46495 CEU:1.0;0.854, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs942379 chr6 25849620 Coding 5a 26176 CEU:1.0;0.959, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165196 chr6 25813150 Coding 6 10294 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165215 chr6 25798932 Exon,non-coding 7 24512 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs3799352 chr6 25822620 Intron 5a 824 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.921, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165176 chr6 25830298 Intron 5a 6854 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2762353 chr6 25794431 Intron 5b 29013 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165177 chr6 25829659 Intron 5b 6215 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6905614 chr6 25840485 Intergenic 5b 17041 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.626 FUNCTIONAL_SNP rs1184804 chr6 25868226 Intron 6 44782 CEU:1.0;0.96, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1185978 chr6 25835895 Intergenic 6 12451 CEU:1.0;0.922, CHB:1.0;0.808, JPT:1.0;0.895 FUNCTIONAL_SNP rs13197601 chr6 25785935 Intron 6 37509 CEU:1.0;0.824, CHB:1.0;1.0, JPT:1.0;0.921 FUNCTIONAL_SNP rs1185569 chr6 25831603 Intron 6 8159 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3799344 chr6 25786993 Intron 6 36451 CEU:0.958;0.815, CHB:1.0;0.517 FUNCTIONAL_SNP rs1165178 chr6 25827516 Intron 6 4072 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165205 chr6 25870542 Intron 6 47098 CEU:1.0;0.962, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9393672 chr6 25842605 Intergenic 7 19161 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.626 FUNCTIONAL_SNP rs1184803 chr6 25834658 Intergenic 7 11214 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.793 FUNCTIONAL_SNP rs3757130 chr6 25770866 Intron 7 52578 CEU:1.0;0.854, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs566530 chr6 25878361 Intron 7 54917 CEU:0.96;0.886, CHB:1.0;0.904, JPT:1.0;0.823 FUNCTIONAL_SNP rs1408273 chr6 25840946 Intergenic 7 17502 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.626 FUNCTIONAL_SNP rs1185567 chr6 25818588 Intron 7 4856 CEU:1.0;0.857, CHB:1.0;1.0, JPT:1.0;0.921, YRI:1.0;1.0 FUNCTIONAL_SNP rs1185568 chr6 25834428 Intergenic 7 10984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165151 chr6 25821616 Intron 7 1828 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.921, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165152 chr6 25818766 Intron 7 4678 CEU:1.0;0.889, CHB:1.0;0.904, JPT:1.0;0.914, YRI:1.0;0.825 FUNCTIONAL_SNP rs1165153 chr6 25817789 Intron 7 5655 CEU:1.0;0.857, CHB:1.0;1.0, JPT:1.0;0.921, YRI:1.0;1.0 FUNCTIONAL_SNP rs765285 chr6 25828242 Intron 7 4798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.896, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165160 chr6 25864456 Intron 7 41012 CEU:1.0;0.961, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3757131 chr6 25783909 Intron 7 39535 CEU:1.0;0.824, CHB:1.0;0.911, JPT:1.0;0.921 FUNCTIONAL_SNP rs1165182 chr6 25837829 Intergenic 7 14385 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165207 chr6 25865266 Intron 7 41822 CEU:1.0;0.962, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165209 chr6 25801319 Intron 7 22125 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165213 chr6 25799676 Intron 7 23768 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1183200 chr6 25818646 Intron 7 4798 CEU:1.0;0.854, CHB:1.0;1.0, JPT:1.0;0.921, YRI:1.0;1.0 LEAD_SNP rs1408272 chr6 25842951 Intergenic 3a ASSOCIATION 21149283 Serum markers of iron status 8.04575749056 SLC17A1 - SLC17A3 ASSOCIATION 19853236 Hematology traits 11.0 SLC17A1 - SLC17A3 ASSOCIATION 19862010 Mean corpuscular hemoglobin 38.3979400087 SLC17A1 - SLC17A3 LEAD_SNP rs1165205 chr6 25870542 Intron 6 ASSOCIATION 18834626 Serum urate 28.3979400087 SLC17A3 FUNCTIONAL_SNP rs942379 chr6 25849620 Coding 5a 20922 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165196 chr6 25813150 Coding 6 57392 CEU:0.959;0.85, CHB:0.902;0.813, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165215 chr6 25798932 Exon,non-coding 7 71610 CEU:0.959;0.85, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs3799352 chr6 25822620 Intron 5a 47922 CEU:1.0;0.962, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165176 chr6 25830298 Intron 5a 40244 CEU:1.0;0.962, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2762353 chr6 25794431 Intron 5b 76111 CEU:0.959;0.85, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165177 chr6 25829659 Intron 5b 40883 CEU:1.0;0.962, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1184804 chr6 25868226 Intron 6 2316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1185569 chr6 25831603 Intron 6 38939 CEU:1.0;0.962, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165178 chr6 25827516 Intron 6 43026 CEU:1.0;0.962, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1185567 chr6 25818588 Intron 7 51954 CEU:1.0;0.886, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1185568 chr6 25834428 Intergenic 7 36114 CEU:1.0;0.962, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165151 chr6 25821616 Intron 7 48926 CEU:1.0;0.962, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165152 chr6 25818766 Intron 7 51776 CEU:0.959;0.85, CHB:0.902;0.813, JPT:1.0;0.914, YRI:1.0;0.825 FUNCTIONAL_SNP rs1165153 chr6 25817789 Intron 7 52753 CEU:0.958;0.847, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs765285 chr6 25828242 Intron 7 42300 CEU:1.0;0.952, CHB:1.0;0.888, JPT:1.0;0.896, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165160 chr6 25864456 Intron 7 6086 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165182 chr6 25837829 Intergenic 7 32713 CEU:1.0;0.962, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165207 chr6 25865266 Intron 7 5276 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165209 chr6 25801319 Intron 7 69223 CEU:0.959;0.85, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1165213 chr6 25799676 Intron 7 70866 CEU:0.959;0.85, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1183200 chr6 25818646 Intron 7 51896 CEU:0.957;0.843, CHB:1.0;0.904, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs1183201 chr6 25823444 Intron 7 47098 CEU:1.0;0.962, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12216125 chr6 25997458 Intergenic 7 ASSOCIATION 19084217 Serum markers of iron status 5.39794000867 TRIM38 - HIST1H1PS2 LEAD_SNP rs1799945 chr6 26091179 Coding 5b ASSOCIATION 21208937 Serum iron levels 8.52287874528 HFE LEAD_SNP rs1800562 chr6 26093141 Coding 5b ASSOCIATION 21665994 Alcohol consumption 31.6989700043 HFE ASSOCIATION 20927387 Red blood cell traits 8.52287874528 HFE ASSOCIATION 20927387 Red blood cell traits 8.52287874528 HFE ASSOCIATION 20927387 Red blood cell traits 6.22184874962 HFE ASSOCIATION 20858683 Glycated hemoglobin levels 19.5228787453 HFE ASSOCIATION 19820699 Serum markers of iron status 7.69897000434 HFE ASSOCIATION 19820699 Serum markers of iron status 6.30102999566 HFE ASSOCIATION 19862010 Hematocrit 8.69897000434 HFE ASSOCIATION 19862010 Hemoglobin 18.2218487496 HFE ASSOCIATION 19862010 Mean corpuscular volume 46.0 HFE ASSOCIATION 19820697 Hematological parameters 23.0 HFE ASSOCIATION 19084217 Serum markers of iron status 14.3979400087 HFE ASSOCIATION 19084217 Serum markers of iron status 10.0 HFE ASSOCIATION 19084217 Serum markers of iron status 10.3979400087 HFE LEAD_SNP rs198846 chr6 26107463 Intergenic 7 ASSOCIATION 19820698 Hemoglobin 8.0 HIST1H1T FUNCTIONAL_SNP rs198851 chr6 26104632 Intergenic 2b 2831 CEU:0.897;0.804, CHB:1.0;1.0 FUNCTIONAL_SNP rs129128 chr6 26125342 Intron 4 17879 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs198833 chr6 26114508 Intergenic 5a 7045 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12206204 chr6 26116982 Intron 5a ASSOCIATION 19414484 Serum bilirubin levels 6.09691001301 HIST1H1T - HIST1H2BC LEAD_SNP rs10946808 chr6 26233387 Intergenic 4 ASSOCIATION 19343178 Height 11.2218487496 HIST1H3E - HIST1H1D ASSOCIATION 18391951 Height 9.22184874962 HIST1H3E - HIST1H1D ASSOCIATION 18391950 Height 16.3979400087 HIST1H3E - HIST1H1D FUNCTIONAL_SNP rs9358913 chr6 26239404 Intergenic 7 6017 CEU:1.0;0.899, CHB:1.0;0.882, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13194984 chr6 26500563 Intergenic 4 ASSOCIATION 19084217 Serum markers of iron status 7.22184874962 BTN1A1 LEAD_SNP rs13194491 chr6 27037080 Intergenic 6 ASSOCIATION 19084217 Serum markers of iron status 8.0 NCRNA00240 - HIST1H2BJ LEAD_SNP rs13194053 chr6 27143883 Intergenic 6 ASSOCIATION 19571811 Schizophrenia 8.0 HIST1H2AH - RPL10P2 ASSOCIATION 19571809 Schizophrenia 8.0 HIST1H2AH - RPL10P2 FUNCTIONAL_SNP rs926300 chr6 27059443 Intergenic 3a 84440 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13219181 chr6 27136225 Intergenic 4 7658 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6913660 chr6 27091425 Intergenic 5a 52458 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6904071 chr6 27047256 Intergenic 6 96627 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13219354 chr6 27185664 Intergenic 6 41781 CEU:1.0;0.855, YRI:0.914;0.667 FUNCTIONAL_SNP rs4452638 chr6 27229265 Intergenic 6 85382 CEU:1.0;0.855, YRI:0.914;0.667 FUNCTIONAL_SNP rs3800307 chr6 27185792 Intergenic 6 41909 CEU:1.0;0.813, YRI:0.93;0.865 LEAD_SNP rs6932590 chr6 27248931 Intergenic 6 ASSOCIATION 19571808 Schizophrenia 12.0 PRSS16 - TRNAI28P FUNCTIONAL_SNP rs3800316 chr6 27256102 Intergenic 4 7171 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3800307 chr6 27185792 Intergenic 6 63139 CEU:1.0;0.832, JPT:1.0;1.0 LEAD_SNP rs4324798 chr6 28776117 Intergenic 5b ASSOCIATION 19836008 Lung adenocarcinoma 7.69897000434 NOP56P1 - RPL13P FUNCTIONAL_SNP rs2230683 chr6 28891176 Coding 2b 115059 CEU:1.0;1.0 FUNCTIONAL_SNP rs3132388 chr6 28827879 Exon,non-coding 7 51762 CEU:1.0;1.0, YRI:1.0;0.755 FUNCTIONAL_SNP rs3130888 chr6 28949960 Intergenic 2b 173843 CEU:1.0;1.0 FUNCTIONAL_SNP rs3131073 chr6 28920972 Intergenic 2b 144855 CEU:1.0;1.0 FUNCTIONAL_SNP rs3131094 chr6 28839353 Intergenic 2b 63236 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3131096 chr6 28852451 Intergenic 2b 76334 CEU:1.0;1.0 FUNCTIONAL_SNP rs3131343 chr6 28775564 Intergenic 2c 553 CEU:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs7775835 chr6 28678357 Intergenic 4 97760 CEU:1.0;0.913 FUNCTIONAL_SNP rs3135304 chr6 28839403 Intergenic 4 63286 CEU:1.0;1.0, YRI:1.0;0.847 FUNCTIONAL_SNP rs3135316 chr6 28864849 Intron 4 88732 CEU:1.0;1.0 FUNCTIONAL_SNP rs3129791 chr6 28954293 Intron 4 178176 CEU:1.0;1.0 FUNCTIONAL_SNP rs3131336 chr6 28831611 Intergenic 4 55494 CEU:1.0;1.0 FUNCTIONAL_SNP rs3131341 chr6 28778723 Intergenic 4 2606 CEU:1.0;1.0 FUNCTIONAL_SNP rs3132397 chr6 28782160 Intergenic 4 6043 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4947336 chr6 28576143 Intron 5a 199974 CEU:1.0;0.906 FUNCTIONAL_SNP rs3130837 chr6 28948092 Intergenic 5a 171975 CEU:1.0;1.0 FUNCTIONAL_SNP rs9257223 chr6 28776317 Intergenic 5b 200 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3118361 chr6 28898287 Intergenic 5b 122170 CEU:1.0;1.0 FUNCTIONAL_SNP rs3130838 chr6 28866528 Intergenic 5b 90411 CEU:1.0;1.0 FUNCTIONAL_SNP rs3130845 chr6 28923367 Intergenic 5b 147250 CEU:1.0;1.0 FUNCTIONAL_SNP rs3132389 chr6 28831021 Intron 5b 54904 CEU:1.0;1.0 FUNCTIONAL_SNP rs3132392 chr6 28838629 Intergenic 5b 62512 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7767099 chr6 28768698 Intergenic 6 7419 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1233580 chr6 28713725 Intergenic 6 62392 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1311918 chr6 28753646 Intergenic 6 22471 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1233599 chr6 28731188 Intergenic 6 44929 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1233600 chr6 28732514 Intergenic 6 43603 CEU:1.0;0.814, YRI:1.0;1.0 FUNCTIONAL_SNP rs1233604 chr6 28734676 Intergenic 6 41441 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3131079 chr6 28958399 Intergenic 6 182282 CEU:1.0;1.0 FUNCTIONAL_SNP rs9257250 chr6 28803633 Intergenic 6 27516 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1233619 chr6 28745452 Intergenic 6 30665 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3118357 chr6 28802149 Intergenic 6 26032 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6908726 chr6 28671343 Intergenic 6 104774 CEU:1.0;1.0, YRI:1.0;0.71 FUNCTIONAL_SNP rs3135296 chr6 28795856 Intergenic 6 19739 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3135300 chr6 28824397 Intergenic 6 48280 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3135311 chr6 28856740 Intergenic 6 80623 CEU:1.0;1.0 FUNCTIONAL_SNP rs3135313 chr6 28857630 Intergenic 6 81513 CEU:1.0;1.0 FUNCTIONAL_SNP rs3135318 chr6 28897980 Intergenic 6 121863 CEU:1.0;0.826 FUNCTIONAL_SNP rs3131335 chr6 28814446 Intergenic 6 38329 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3130885 chr6 28939283 Intergenic 7 163166 CEU:0.904;0.816 FUNCTIONAL_SNP rs3130895 chr6 28905791 Intergenic 7 129674 CEU:1.0;1.0 FUNCTIONAL_SNP rs7766699 chr6 28768267 Intergenic 7 7850 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1233579 chr6 28712663 Intergenic 7 63454 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9257140 chr6 28727121 Intergenic 7 48996 CEU:1.0;0.814 FUNCTIONAL_SNP rs1233610 chr6 28736988 Intergenic 7 39129 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1233618 chr6 28742850 Intergenic 7 33267 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1233620 chr6 28746171 Intergenic 7 29946 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3131093 chr6 28837437 Intergenic 7 61320 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3131095 chr6 28851572 Intergenic 7 75455 CEU:1.0;1.0 FUNCTIONAL_SNP rs9257183 chr6 28756008 Intergenic 7 20109 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13194504 chr6 28630691 Intergenic 7 145426 CEU:1.0;1.0 FUNCTIONAL_SNP rs9393929 chr6 28696063 Intergenic 7 80054 CEU:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs9257248 chr6 28803291 Intergenic 7 27174 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3118370 chr6 28833101 Intergenic 7 56984 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3135293 chr6 28877247 Intron 7 101130 CEU:1.0;1.0 FUNCTIONAL_SNP rs3135307 chr6 28847384 Intergenic 7 71267 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3135308 chr6 28852156 Intergenic 7 76039 CEU:1.0;1.0 FUNCTIONAL_SNP rs3135309 chr6 28855805 Intergenic 7 79688 CEU:1.0;1.0 FUNCTIONAL_SNP rs3135310 chr6 28856689 Intergenic 7 80572 CEU:1.0;1.0 FUNCTIONAL_SNP rs3135312 chr6 28856889 Intergenic 7 80772 CEU:1.0;1.0 FUNCTIONAL_SNP rs3132390 chr6 28832788 Intergenic 7 56671 CEU:1.0;1.0, YRI:1.0;0.669 LEAD_SNP rs4947339 chr6 28916252 Intergenic 7 ASSOCIATION 20526338 Platelet aggregation 5.69897000434 C6orf100 - KRT18P1 FUNCTIONAL_SNP rs6456880 chr6 28963248 Coding 5a 46996 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.946 FUNCTIONAL_SNP rs2394517 chr6 29069299 Coding 7 153047 CEU:1.0;0.959, CHB:1.0;0.9, JPT:1.0;1.0 FUNCTIONAL_SNP rs6916161 chr6 28983846 Intergenic 2b 67594 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs2269555 chr6 28964847 Intron 2b 48595 CEU:1.0;0.96, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs6456876 chr6 28918936 Intergenic 4 2684 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs6456895 chr6 29039895 Intergenic 4 123643 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs4713186 chr6 28909465 Intergenic 4 6787 CEU:1.0;0.96, CHB:1.0;0.95, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs6901599 chr6 28926745 Intergenic 4 10493 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs4713188 chr6 28926026 Intergenic 5b 9774 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs9257449 chr6 28957545 Intergenic 5b 41293 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs3130778 chr6 29099579 Intergenic 5b 183327 CEU:1.0;0.96, CHB:1.0;0.903, JPT:0.945;0.892 FUNCTIONAL_SNP rs6906909 chr6 28968146 Intron 6 51894 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs2179648 chr6 29036528 Intergenic 6 120276 CEU:1.0;0.96, CHB:1.0;0.899, JPT:1.0;1.0 FUNCTIONAL_SNP rs9380109 chr6 29057971 Intergenic 6 141719 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs3129108 chr6 29084087 Intergenic 6 167835 CEU:1.0;0.96, CHB:1.0;0.859, JPT:1.0;1.0 FUNCTIONAL_SNP rs3129097 chr6 29077353 Intergenic 6 161101 CEU:1.0;0.96, CHB:1.0;0.9, JPT:1.0;1.0 FUNCTIONAL_SNP rs9468480 chr6 29046943 Intergenic 6 130691 CEU:1.0;0.96, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs2394512 chr6 28992184 Intergenic 6 75932 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs3130775 chr6 29098369 Intergenic 6 182117 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;0.945 FUNCTIONAL_SNP rs6941946 chr6 28988583 Intergenic 6 72331 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs9257461 chr6 28977925 Intergenic 6 61673 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;1.0 FUNCTIONAL_SNP rs6456883 chr6 28970369 Intron 7 54117 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs6456891 chr6 29016587 Intergenic 7 100335 CEU:1.0;0.922, CHB:1.0;0.9, JPT:1.0;0.945 FUNCTIONAL_SNP rs4713192 chr6 28943880 Intergenic 7 27628 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs6456901 chr6 29055442 Intergenic 7 139190 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs2050231 chr6 29042389 Intergenic 7 126137 CEU:1.0;0.96, CHB:1.0;0.9, JPT:1.0;1.0 FUNCTIONAL_SNP rs3129109 chr6 29084232 Intergenic 7 167980 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs3129110 chr6 29085228 Intergenic 7 168976 CEU:1.0;0.96, CHB:1.0;0.901, JPT:1.0;0.946 FUNCTIONAL_SNP rs6904975 chr6 28952035 Intergenic 7 35783 CEU:1.0;0.96, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs6920392 chr6 28967038 Intron 7 50786 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs3131089 chr6 29071071 Intergenic 7 154819 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs7768299 chr6 28990195 Intergenic 7 73943 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs2013972 chr6 29058997 Intergenic 7 142745 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs2064162 chr6 29088815 Intergenic 7 172563 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;0.946 FUNCTIONAL_SNP rs9393941 chr6 29045632 Intergenic 7 129380 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs2143574 chr6 29014026 Intergenic 7 97774 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs1159519 chr6 29043580 Intergenic 7 127328 CEU:1.0;0.96, CHB:1.0;0.81, JPT:1.0;1.0 FUNCTIONAL_SNP rs3130774 chr6 29096414 Intron 7 180162 CEU:1.0;0.96, CHB:1.0;0.903, JPT:0.945;0.892 FUNCTIONAL_SNP rs3130772 chr6 29092579 Intron 7 176327 CEU:1.0;0.958, CHB:1.0;0.903, JPT:1.0;0.947 FUNCTIONAL_SNP rs4947360 chr6 29051397 Intergenic 7 135145 CEU:1.0;0.96, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs2064365 chr6 29046420 Intergenic 7 130168 CEU:1.0;0.922, CHB:0.775;0.57, JPT:0.926;0.642 FUNCTIONAL_SNP rs9257455 chr6 28970745 Intron 7 54493 CEU:1.0;0.958, CHB:1.0;0.948, JPT:1.0;1.0 LEAD_SNP rs3129109 chr6 29084232 Intergenic 7 ASSOCIATION 20881960 Height 16.6989700043 OR2J3 - OR2N1P FUNCTIONAL_SNP rs6456880 chr6 28963248 Coding 5a 120984 CEU:1.0;0.96, CHB:1.0;0.95, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs2394517 chr6 29069299 Coding 7 14933 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2269555 chr6 28964847 Intron 2b 119385 CEU:1.0;0.922, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6916161 chr6 28983846 Intergenic 2b 100386 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6456876 chr6 28918936 Intergenic 4 165296 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;0.946 FUNCTIONAL_SNP rs6456895 chr6 29039895 Intergenic 4 44337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4713186 chr6 28909465 Intergenic 4 174767 CEU:0.959;0.92, CHB:0.947;0.852, JPT:1.0;0.946 FUNCTIONAL_SNP rs6901599 chr6 28926745 Intergenic 4 157487 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;0.946 FUNCTIONAL_SNP rs4713188 chr6 28926026 Intergenic 5b 158206 CEU:0.959;0.92, CHB:1.0;0.898, JPT:1.0;0.945 FUNCTIONAL_SNP rs3130778 chr6 29099579 Intergenic 5b 15347 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.945;0.892 FUNCTIONAL_SNP rs9257449 chr6 28957545 Intergenic 5b 126687 CEU:1.0;0.959, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2179648 chr6 29036528 Intergenic 6 47704 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs3129108 chr6 29084087 Intergenic 6 145 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6906909 chr6 28968146 Intron 6 116086 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6941946 chr6 28988583 Intergenic 6 95649 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3129097 chr6 29077353 Intergenic 6 6879 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9380109 chr6 29057971 Intergenic 6 26261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9468480 chr6 29046943 Intergenic 6 37289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2394512 chr6 28992184 Intergenic 6 92048 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3130775 chr6 29098369 Intergenic 6 14137 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs9257461 chr6 28977925 Intergenic 6 106307 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6456883 chr6 28970369 Intron 7 113863 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6456891 chr6 29016587 Intergenic 7 67645 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs6456901 chr6 29055442 Intergenic 7 28790 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6904975 chr6 28952035 Intergenic 7 132197 CEU:0.959;0.92, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2050231 chr6 29042389 Intergenic 7 41843 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6920392 chr6 28967038 Intron 7 117194 CEU:1.0;0.96, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3131089 chr6 29071071 Intergenic 7 13161 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4713192 chr6 28943880 Intergenic 7 140352 CEU:1.0;0.96, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7768299 chr6 28990195 Intergenic 7 94037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2013972 chr6 29058997 Intergenic 7 25235 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9393941 chr6 29045632 Intergenic 7 38600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3129110 chr6 29085228 Intergenic 7 996 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs2064162 chr6 29088815 Intergenic 7 4583 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs4947339 chr6 28916252 Intergenic 7 167980 CEU:1.0;0.96, CHB:1.0;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs2143574 chr6 29014026 Intergenic 7 70206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1159519 chr6 29043580 Intergenic 7 40652 CEU:1.0;1.0, CHB:1.0;0.901, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3130772 chr6 29092579 Intron 7 8347 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;1.0 FUNCTIONAL_SNP rs3130774 chr6 29096414 Intron 7 12182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.945;0.892 FUNCTIONAL_SNP rs4947360 chr6 29051397 Intergenic 7 32835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2064365 chr6 29046420 Intergenic 7 37812 CEU:1.0;0.96, CHB:0.836;0.664, JPT:0.926;0.642 FUNCTIONAL_SNP rs9257455 chr6 28970745 Intron 7 113487 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs29232 chr6 29611431 Intergenic 7 ASSOCIATION 19664746 Nasopharyngeal carcinoma 16.0457574906 SUMO2P1 - MOG LEAD_SNP rs3129055 chr6 29670261 Intergenic 4 ASSOCIATION 19664746 Nasopharyngeal carcinoma 10.15490196 ZFP57 - HCP5P15 FUNCTIONAL_SNP rs3129047 chr6 29670573 Intergenic 4 312 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.877 FUNCTIONAL_SNP rs3131870 chr6 29670192 Intergenic 5b 69 CEU:1.0;0.877, CHB:1.0;0.945, JPT:0.94;0.883, YRI:0.944;0.844 FUNCTIONAL_SNP rs3116802 chr6 29667890 Intergenic 6 2371 CEU:1.0;0.826, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.882 FUNCTIONAL_SNP rs3129066 chr6 29668537 Intergenic 6 1724 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2747457 chr6 29656417 Intergenic 6 13844 CEU:1.0;0.877, CHB:1.0;0.95, JPT:1.0;0.908, YRI:1.0;0.956 FUNCTIONAL_SNP rs2107203 chr6 29669830 Intergenic 6 431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2747460 chr6 29657127 Intergenic 6 13134 CEU:1.0;0.877, CHB:1.0;0.95, JPT:1.0;0.908, YRI:1.0;0.956 FUNCTIONAL_SNP rs3129070 chr6 29668076 Intergenic 6 2185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3117301 chr6 29654700 Intergenic 7 15561 CEU:1.0;0.892, CHB:1.0;0.94, JPT:1.0;0.855, YRI:1.0;0.954 FUNCTIONAL_SNP rs3116803 chr6 29667872 Intergenic 7 2389 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 LEAD_SNP rs2523393 chr6 29705659 Intron 5b ASSOCIATION 19525953 Multiple sclerosis 17.0 RPL23AP1 - MICE FUNCTIONAL_SNP rs2394160 chr6 29703262 Exon,non-coding 6 2397 CEU:1.0;0.959, CHB:1.0;0.896, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2523389 chr6 29706128 Exon,non-coding 4 469 CEU:1.0;0.96, CHB:1.0;0.904, JPT:1.0;0.954, YRI:1.0;1.0 FUNCTIONAL_SNP rs2735052 chr6 29701564 Intron 3a 4095 CEU:1.0;0.959, CHB:1.0;0.899, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2394159 chr6 29702679 Intron 4 2980 CEU:1.0;0.844, CHB:1.0;0.899, JPT:1.0;0.905, YRI:1.0;1.0 FUNCTIONAL_SNP rs2523395 chr6 29702510 Intron 4 3149 CEU:1.0;0.959, CHB:1.0;0.899, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2735051 chr6 29705688 Intron 5b 29 CEU:1.0;0.844, CHB:1.0;0.899, JPT:1.0;0.905, YRI:1.0;1.0 FUNCTIONAL_SNP rs2523388 chr6 29707704 Intron 5b 2045 CEU:1.0;0.96, CHB:1.0;0.902, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2743918 chr6 29704921 Intron 6 738 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2743922 chr6 29699713 Intron 6 5946 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.905, YRI:1.0;1.0 FUNCTIONAL_SNP rs2743951 chr6 29709234 Intron 6 3575 CEU:0.958;0.918, CHB:1.0;0.899, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2844831 chr6 29706277 Intron 6 618 CEU:1.0;0.958, CHB:1.0;0.899, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2844846 chr6 29712036 Intron 6 6377 CEU:1.0;0.848, CHB:1.0;0.902, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs2743949 chr6 29711124 Intron 7 5465 CEU:1.0;0.853, CHB:1.0;0.904, JPT:1.0;0.868, YRI:1.0;1.0 FUNCTIONAL_SNP rs2523402 chr6 29699156 Intron 7 6503 CEU:1.0;0.84, CHB:1.0;0.899, JPT:1.0;0.905, YRI:1.0;1.0 LEAD_SNP rs1610677 chr6 29789171 Intergenic 7 ASSOCIATION 21653640 Rheumatoid arthritis 14.3979400087 HCP5P12 - HLA-G FUNCTIONAL_SNP rs1063320 chr6 29798749 Exon,non-coding 6 9578 CEU:1.0;0.889, CHB:1.0;0.954, JPT:1.0;0.892, YRI:0.946;0.57 FUNCTIONAL_SNP rs1611165 chr6 29792114 Intergenic 5a 2943 CEU:1.0;0.889, CHB:1.0;0.952, JPT:1.0;0.886, YRI:0.946;0.569 FUNCTIONAL_SNP rs1632942 chr6 29796640 Intron 5b 7469 CEU:1.0;0.895, CHB:1.0;0.954, JPT:1.0;0.892, YRI:0.949;0.585 FUNCTIONAL_SNP rs2844806 chr6 29933439 Intergenic 5b 144268 CEU:1.0;0.849 FUNCTIONAL_SNP rs915668 chr6 29798459 Intron 5b 9288 CEU:1.0;0.889, CHB:1.0;0.954, JPT:1.0;0.892, YRI:0.946;0.57 FUNCTIONAL_SNP rs915669 chr6 29798425 Intron 5b 9254 CEU:1.0;0.889, CHB:1.0;0.952, JPT:1.0;0.892, YRI:0.946;0.57 FUNCTIONAL_SNP rs1736927 chr6 29796115 Intron 5b 6944 CEU:1.0;0.926, CHB:1.0;0.954, JPT:1.0;0.892, YRI:1.0;0.586 FUNCTIONAL_SNP rs1736935 chr6 29794443 Intergenic 5b 5272 CEU:1.0;0.895, CHB:1.0;0.954, JPT:1.0;0.892, YRI:0.949;0.585 FUNCTIONAL_SNP rs1736936 chr6 29794317 Intergenic 5b 5146 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs1736920 chr6 29797173 Intron 6 8002 CEU:1.0;0.895, CHB:1.0;0.954, JPT:1.0;0.889, YRI:0.952;0.602 FUNCTIONAL_SNP rs1632933 chr6 29797933 Intron 6 8762 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs1632948 chr6 29794049 Intergenic 6 4878 CEU:0.913;0.8, CHB:0.95;0.903 FUNCTIONAL_SNP rs2249571 chr6 29792575 Intergenic 6 3404 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs1611149 chr6 29789999 Intergenic 6 828 CEU:1.0;0.889, CHB:1.0;0.954, JPT:1.0;0.892, YRI:0.946;0.57 FUNCTIONAL_SNP rs1610678 chr6 29789190 Intergenic 6 19 CEU:1.0;0.889, CHB:1.0;0.954, JPT:1.0;0.892, YRI:0.946;0.57 FUNCTIONAL_SNP rs1632941 chr6 29796685 Intron 7 7514 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;1.0, YRI:1.0;0.965 LEAD_SNP rs2523822 chr6 29828660 Intergenic 5b ASSOCIATION 21570397 Drug-induced liver injury (amoxicillin-clavulanate) 9.69897000434 HLA-G - HCG4P7 FUNCTIONAL_SNP rs9357092 chr6 29984252 Exon,non-coding 6 155592 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.769 FUNCTIONAL_SNP rs6904029 chr6 29943067 Exon,non-coding 5b 114407 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.926;0.706 FUNCTIONAL_SNP rs4711206 chr6 29987184 Exon,non-coding 6 158524 CEU:1.0;1.0, CHB:1.0;0.77, JPT:1.0;0.769 FUNCTIONAL_SNP rs9348835 chr6 29985630 Exon,non-coding 6 156970 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.769 FUNCTIONAL_SNP rs3903160 chr6 29932897 Intergenic 2a 104237 CEU:1.0;1.0, CHB:1.0;0.731, JPT:1.0;0.715, YRI:1.0;1.0 FUNCTIONAL_SNP rs3115627 chr6 29820278 Intergenic 2b 8382 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4959037 chr6 29936307 Intergenic 3a 107647 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.923;0.695 FUNCTIONAL_SNP rs9393986 chr6 29973526 Intergenic 4 144866 CEU:1.0;1.0, CHB:1.0;0.766, JPT:0.926;0.706 FUNCTIONAL_SNP rs6935053 chr6 29934163 Intergenic 4 105503 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.921;0.652 FUNCTIONAL_SNP rs4713279 chr6 29944896 Intron 4 116236 CEU:1.0;0.95 FUNCTIONAL_SNP rs2517719 chr6 29916253 Intergenic 4 87593 CEU:1.0;0.863 FUNCTIONAL_SNP rs4713270 chr6 29934697 Intergenic 4 106037 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.92;0.65 FUNCTIONAL_SNP rs9393984 chr6 29932738 Intergenic 4 104078 CEU:1.0;1.0, CHB:1.0;0.684, JPT:1.0;0.702 FUNCTIONAL_SNP rs6914900 chr6 29934170 Intergenic 4 105510 CEU:1.0;1.0, CHB:0.76;0.545, JPT:0.908;0.611 FUNCTIONAL_SNP rs4391295 chr6 29935590 Intergenic 4 106930 CEU:1.0;1.0, CHB:0.735;0.54, JPT:0.921;0.652 FUNCTIONAL_SNP rs28749167 chr6 29921034 Intergenic 4 92374 CEU:1.0;0.869, CHB:0.835;0.63, JPT:0.925;0.702 FUNCTIONAL_SNP rs2735097 chr6 29915301 Intergenic 4 86641 CEU:1.0;0.875, CHB:0.941;0.721, JPT:1.0;0.769 FUNCTIONAL_SNP rs2394173 chr6 29773158 Intergenic 5a 55502 CEU:1.0;0.875, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;1.0 FUNCTIONAL_SNP rs12193100 chr6 29936914 Intergenic 5a 108254 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.921;0.652 FUNCTIONAL_SNP rs12193110 chr6 29937104 Intergenic 5b 108444 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.921;0.652 FUNCTIONAL_SNP rs2571388 chr6 29915767 Intergenic 5b 87107 CEU:1.0;0.873, CHB:0.941;0.721, JPT:1.0;0.769 FUNCTIONAL_SNP rs4959039 chr6 29957069 Intergenic 5b 128409 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.769 FUNCTIONAL_SNP rs2517703 chr6 29921700 Intergenic 5b 93040 CEU:0.949;0.817 FUNCTIONAL_SNP rs9295826 chr6 29970927 Intergenic 5b 142267 CEU:1.0;1.0 FUNCTIONAL_SNP rs3823358 chr6 29942205 Intergenic 5b 113545 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.926;0.706 FUNCTIONAL_SNP rs3823369 chr6 29943916 Intron 5b 115256 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.926;0.706 FUNCTIONAL_SNP rs3823374 chr6 29944148 Intron 5b 115488 CEU:1.0;0.819, JPT:0.913;0.665 FUNCTIONAL_SNP rs3823375 chr6 29944158 Intron 5b 115498 CEU:1.0;0.838, CHB:0.786;0.587, JPT:0.926;0.706 FUNCTIONAL_SNP rs4947244 chr6 29954364 Intergenic 5b 125704 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.769 FUNCTIONAL_SNP rs12206499 chr6 29937127 Intergenic 5b 108467 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.921;0.652 FUNCTIONAL_SNP rs12202296 chr6 29908469 Intergenic 5b 79809 CEU:1.0;0.875, CHB:0.941;0.721, JPT:1.0;0.769 FUNCTIONAL_SNP rs9380150 chr6 30010492 Intergenic 5b 181832 CEU:1.0;1.0, CHB:0.886;0.674, JPT:0.926;0.705 FUNCTIONAL_SNP rs2734982 chr6 29821567 Intergenic 5b 7093 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;1.0 FUNCTIONAL_SNP rs2517929 chr6 29745175 Intergenic 5b 83485 CEU:1.0;0.875, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;1.0 FUNCTIONAL_SNP rs1611704 chr6 29828467 Intergenic 5b 193 CEU:1.0;0.801, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.839 FUNCTIONAL_SNP rs35066870 chr6 29942639 Intergenic 5b 113979 CEU:1.0;1.0, CHB:0.761;0.547, JPT:0.925;0.704 FUNCTIONAL_SNP rs9405044 chr6 30006765 Intergenic 6 178105 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.769 FUNCTIONAL_SNP rs11752303 chr6 29937541 Intergenic 6 108881 CEU:1.0;1.0, CHB:1.0;0.724, JPT:0.92;0.65 FUNCTIONAL_SNP rs4959010 chr6 29940943 Intergenic 6 112283 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.926;0.706 FUNCTIONAL_SNP rs9380146 chr6 29817244 Intergenic 6 11416 CEU:1.0;0.866, CHB:1.0;0.758, JPT:0.908;0.547 FUNCTIONAL_SNP rs2517811 chr6 29865718 Intergenic 6 37058 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2975033 chr6 29822261 Intergenic 6 6399 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4713274 chr6 29937493 Intergenic 6 108833 CEU:1.0;1.0, CHB:1.0;0.731, JPT:1.0;0.715 FUNCTIONAL_SNP rs4713275 chr6 29937580 Intergenic 6 108920 CEU:1.0;1.0, CHB:0.937;0.707, JPT:1.0;0.715 FUNCTIONAL_SNP rs9295825 chr6 29941431 Intergenic 6 112771 CEU:1.0;1.0, CHB:1.0;0.731, JPT:1.0;0.769 FUNCTIONAL_SNP rs6916422 chr6 29938110 Intergenic 6 109450 CEU:1.0;1.0, CHB:0.735;0.54, JPT:0.921;0.652 FUNCTIONAL_SNP rs2517930 chr6 29745075 Intergenic 6 83585 CEU:1.0;0.83, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;0.913 FUNCTIONAL_SNP rs2735035 chr6 29757715 Intergenic 6 70945 CEU:1.0;0.875, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;1.0 FUNCTIONAL_SNP rs12195260 chr6 29938455 Intergenic 6 109795 CEU:1.0;1.0, CHB:0.775;0.542, JPT:0.907;0.609 FUNCTIONAL_SNP rs4248143 chr6 29935891 Intergenic 6 107231 CEU:1.0;1.0, CHB:0.783;0.583, JPT:0.921;0.652 FUNCTIONAL_SNP rs3823355 chr6 29942083 Intergenic 6 113423 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.926;0.706 FUNCTIONAL_SNP rs3910312 chr6 30008746 Intergenic 6 180086 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.769 FUNCTIONAL_SNP rs2275855 chr6 29976789 Intron 7 148129 CEU:1.0;1.0, CHB:1.0;0.772, JPT:0.925;0.704 FUNCTIONAL_SNP rs2571391 chr6 29923838 Intergenic 7 95178 CEU:1.0;0.869, CHB:0.939;0.714, JPT:1.0;0.769 FUNCTIONAL_SNP rs2394247 chr6 29930706 Intergenic 7 102046 CEU:1.0;1.0, CHB:0.735;0.54, JPT:0.917;0.637 FUNCTIONAL_SNP rs2844821 chr6 29838642 Intergenic 7 9982 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2517715 chr6 29917439 Intergenic 7 88779 CEU:1.0;0.875, CHB:0.941;0.721, JPT:1.0;0.769 FUNCTIONAL_SNP rs6457057 chr6 29784503 Intergenic 7 44157 CEU:1.0;0.895, CHB:1.0;1.0, JPT:1.0;0.938, YRI:1.0;1.0 FUNCTIONAL_SNP rs3823352 chr6 29942033 Intergenic 7 113373 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.926;0.706 FUNCTIONAL_SNP rs2517755 chr6 29896659 Intergenic 7 67999 CEU:1.0;0.875, CHB:0.882;0.665 FUNCTIONAL_SNP rs7776026 chr6 29785101 Intergenic 7 43559 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;1.0 FUNCTIONAL_SNP rs4711207 chr6 30005754 Intergenic 7 177094 CEU:1.0;1.0, CHB:1.0;0.772, JPT:0.925;0.704 FUNCTIONAL_SNP rs4713281 chr6 29978352 Intergenic 7 149692 CEU:1.0;1.0, CHB:1.0;0.764, JPT:0.926;0.706 FUNCTIONAL_SNP rs9393987 chr6 30009169 Intergenic 7 180509 CEU:1.0;1.0, CHB:1.0;0.725, JPT:1.0;0.731 FUNCTIONAL_SNP rs2517840 chr6 29826092 Intergenic 7 2568 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12195207 chr6 29938507 Intergenic 7 109847 CEU:1.0;1.0, CHB:0.773;0.566, JPT:0.921;0.652 LEAD_SNP rs2860580 chr6 29906691 Intergenic 4 ASSOCIATION 20512145 Nasopharyngeal carcinoma 66.3010299957 P5.8 - HCG4P5 LEAD_SNP rs1061235 chr6 29913298 Exon,non-coding 5a ASSOCIATION 21428769 Adverse response to carbamapezine 7.0 HLA-A LEAD_SNP rs2517713 chr6 29918099 Intergenic 4 ASSOCIATION 19664746 Nasopharyngeal carcinoma 19.3979400087 HCP5P3 - HCG4P4 FUNCTIONAL_SNP rs2517723 chr6 29915268 Intergenic 4 2831 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs376646 chr6 29914377 Intergenic 5a 3722 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs417162 chr6 29916505 Intergenic 5a 1594 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs9260579 chr6 29922391 Intergenic 5b 4292 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs7767668 chr6 29923023 Intergenic 5b 4924 CEU:1.0;0.905, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;0.859 FUNCTIONAL_SNP rs7747114 chr6 29919774 Intergenic 6 1675 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2508037 chr6 29918436 Intergenic 6 337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.927 FUNCTIONAL_SNP rs2975042 chr6 29920536 Intergenic 6 2437 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9260599 chr6 29922653 Intergenic 7 4554 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs9260484 chr6 29920253 Intergenic 7 2154 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 LEAD_SNP rs6904029 chr6 29943067 Exon,non-coding 5b ASSOCIATION 20410501 Vitiligo 21.0 HCG9 FUNCTIONAL_SNP rs9357092 chr6 29984252 Exon,non-coding 6 41185 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.933 FUNCTIONAL_SNP rs9348835 chr6 29985630 Exon,non-coding 6 42563 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.933 FUNCTIONAL_SNP rs4711206 chr6 29987184 Exon,non-coding 6 44117 CEU:1.0;1.0, CHB:1.0;0.81, JPT:1.0;0.933 FUNCTIONAL_SNP rs3903160 chr6 29932897 Intergenic 2a 10170 CEU:1.0;1.0, CHB:1.0;0.731, JPT:1.0;0.868 FUNCTIONAL_SNP rs9261424 chr6 30080994 Intron 2a 137927 CEU:1.0;0.955 FUNCTIONAL_SNP rs9295829 chr6 30028800 Intergenic 2b 85733 CEU:1.0;1.0, CHB:1.0;0.772, JPT:0.928;0.756 FUNCTIONAL_SNP rs3115627 chr6 29820278 Intergenic 2b 122789 CEU:1.0;0.832, CHB:0.741;0.549, JPT:0.926;0.706 FUNCTIONAL_SNP rs4959037 chr6 29936307 Intergenic 3a 6760 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:0.927;0.603 FUNCTIONAL_SNP rs3807031 chr6 30033884 Intergenic 3a 90817 CEU:1.0;0.869, CHB:1.0;0.58, JPT:1.0;0.57 FUNCTIONAL_SNP rs6935053 chr6 29934163 Intergenic 4 8904 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.934 FUNCTIONAL_SNP rs9393984 chr6 29932738 Intergenic 4 10329 CEU:1.0;1.0, CHB:1.0;0.684, JPT:1.0;0.861 FUNCTIONAL_SNP rs2517719 chr6 29916253 Intergenic 4 26814 CEU:1.0;0.863 FUNCTIONAL_SNP rs4391295 chr6 29935590 Intergenic 4 7477 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:0.927;0.603 FUNCTIONAL_SNP rs4713270 chr6 29934697 Intergenic 4 8370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.934 FUNCTIONAL_SNP rs4713279 chr6 29944896 Intron 4 1829 CEU:1.0;0.95 FUNCTIONAL_SNP rs9393986 chr6 29973526 Intergenic 4 30459 CEU:1.0;1.0, CHB:1.0;0.766, JPT:0.931;0.867 FUNCTIONAL_SNP rs6914900 chr6 29934170 Intergenic 4 8897 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.923, YRI:1.0;0.931 FUNCTIONAL_SNP rs28749167 chr6 29921034 Intergenic 4 22033 CEU:1.0;0.869, CHB:0.891;0.717, JPT:0.86;0.739 FUNCTIONAL_SNP rs2735097 chr6 29915301 Intergenic 4 27766 CEU:1.0;0.875, CHB:1.0;0.815, JPT:0.927;0.802 FUNCTIONAL_SNP rs2394173 chr6 29773158 Intergenic 5a 169909 CEU:1.0;0.875, CHB:0.741;0.549, JPT:0.924;0.662 FUNCTIONAL_SNP rs12193100 chr6 29936914 Intergenic 5a 6153 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.934 FUNCTIONAL_SNP rs2523822 chr6 29828660 Intergenic 5b 114407 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.926;0.706 FUNCTIONAL_SNP rs2571388 chr6 29915767 Intergenic 5b 27300 CEU:1.0;0.873, CHB:1.0;0.815, JPT:0.927;0.802 FUNCTIONAL_SNP rs9380150 chr6 30010492 Intergenic 5b 67425 CEU:1.0;1.0, CHB:0.886;0.675, JPT:0.931;0.867 FUNCTIONAL_SNP rs4959039 chr6 29957069 Intergenic 5b 14002 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.933 FUNCTIONAL_SNP rs2517703 chr6 29921700 Intergenic 5b 21367 CEU:0.949;0.817 FUNCTIONAL_SNP rs9393989 chr6 30040084 Intron 5b 97017 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.933 FUNCTIONAL_SNP rs3823358 chr6 29942205 Intergenic 5b 862 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3823369 chr6 29943916 Intron 5b 849 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs3823374 chr6 29944148 Intron 5b 1081 CEU:1.0;0.819, CHB:1.0;0.858, JPT:1.0;1.0, YRI:1.0;0.764 FUNCTIONAL_SNP rs3823375 chr6 29944158 Intron 5b 1091 CEU:1.0;0.838, CHB:0.948;0.854, JPT:1.0;1.0, YRI:0.926;0.663 FUNCTIONAL_SNP rs12193110 chr6 29937104 Intergenic 5b 5963 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:0.927;0.603 FUNCTIONAL_SNP rs4947244 chr6 29954364 Intergenic 5b 11297 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.933 FUNCTIONAL_SNP rs9295826 chr6 29970927 Intergenic 5b 27860 CEU:1.0;1.0 FUNCTIONAL_SNP rs2734982 chr6 29821567 Intergenic 5b 121500 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.924;0.662 FUNCTIONAL_SNP rs2517929 chr6 29745175 Intergenic 5b 197892 CEU:1.0;0.875, CHB:0.741;0.549, JPT:0.923;0.659 FUNCTIONAL_SNP rs1611704 chr6 29828467 Intergenic 5b 114600 CEU:1.0;0.801, CHB:0.783;0.583, JPT:0.924;0.662 FUNCTIONAL_SNP rs12206499 chr6 29937127 Intergenic 5b 5940 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:0.933;0.871 FUNCTIONAL_SNP rs35066870 chr6 29942639 Intergenic 5b 428 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12202296 chr6 29908469 Intergenic 5b 34598 CEU:1.0;0.875, CHB:1.0;0.815, JPT:0.927;0.802 FUNCTIONAL_SNP rs4713275 chr6 29937580 Intergenic 6 5487 CEU:1.0;1.0, CHB:1.0;0.849, JPT:1.0;0.868 FUNCTIONAL_SNP rs12195260 chr6 29938455 Intergenic 6 4612 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.923, YRI:1.0;0.934 FUNCTIONAL_SNP rs9405044 chr6 30006765 Intergenic 6 63698 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.933 FUNCTIONAL_SNP rs11752303 chr6 29937541 Intergenic 6 5526 CEU:1.0;1.0, CHB:1.0;0.724, JPT:0.928;0.862 FUNCTIONAL_SNP rs3910312 chr6 30008746 Intergenic 6 65679 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.933 FUNCTIONAL_SNP rs4959010 chr6 29940943 Intergenic 6 2124 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9380146 chr6 29817244 Intergenic 6 125823 CEU:1.0;0.866 FUNCTIONAL_SNP rs2517811 chr6 29865718 Intergenic 6 77349 CEU:1.0;1.0, CHB:0.777;0.573 FUNCTIONAL_SNP rs2975033 chr6 29822261 Intergenic 6 120806 CEU:1.0;1.0, CHB:0.741;0.549, JPT:0.926;0.706 FUNCTIONAL_SNP rs4713274 chr6 29937493 Intergenic 6 5574 CEU:1.0;1.0, CHB:1.0;0.731, JPT:1.0;0.868 FUNCTIONAL_SNP rs6916422 chr6 29938110 Intergenic 6 4957 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.934 FUNCTIONAL_SNP rs9261438 chr6 30089280 Intergenic 6 146213 CEU:1.0;0.875 FUNCTIONAL_SNP rs4959041 chr6 30077967 Intron 6 134900 CEU:1.0;0.956 FUNCTIONAL_SNP rs2517930 chr6 29745075 Intergenic 6 197992 CEU:1.0;0.83, CHB:0.741;0.549, JPT:0.917;0.638 FUNCTIONAL_SNP rs2735035 chr6 29757715 Intergenic 6 185352 CEU:1.0;0.875, CHB:0.741;0.549, JPT:0.923;0.659 FUNCTIONAL_SNP rs9295825 chr6 29941431 Intergenic 6 1636 CEU:1.0;1.0, CHB:1.0;0.731, JPT:1.0;0.933 FUNCTIONAL_SNP rs4248143 chr6 29935891 Intergenic 6 7176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.934 FUNCTIONAL_SNP rs3823355 chr6 29942083 Intergenic 6 984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4711209 chr6 30047403 Intergenic 6 104336 CEU:1.0;1.0, CHB:0.941;0.721, JPT:1.0;0.933 FUNCTIONAL_SNP rs2275855 chr6 29976789 Intron 7 33722 CEU:1.0;1.0, CHB:1.0;0.772, JPT:0.931;0.867 FUNCTIONAL_SNP rs2571391 chr6 29923838 Intergenic 7 19229 CEU:1.0;0.869, CHB:1.0;0.81, JPT:0.927;0.802 FUNCTIONAL_SNP rs2284163 chr6 30079015 Intron 7 135948 CEU:1.0;0.956 FUNCTIONAL_SNP rs2394247 chr6 29930706 Intergenic 7 12361 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.929, YRI:0.929;0.863 FUNCTIONAL_SNP rs2517715 chr6 29917439 Intergenic 7 25628 CEU:1.0;0.875, CHB:1.0;0.815, JPT:0.927;0.802 FUNCTIONAL_SNP rs6457057 chr6 29784503 Intergenic 7 158564 CEU:1.0;0.895, CHB:0.742;0.518, JPT:0.92;0.647 FUNCTIONAL_SNP rs3823352 chr6 29942033 Intergenic 7 1034 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2517755 chr6 29896659 Intergenic 7 46408 CEU:1.0;0.875, CHB:0.942;0.758 FUNCTIONAL_SNP rs7776026 chr6 29785101 Intergenic 7 157966 CEU:1.0;0.852, CHB:0.751;0.532, JPT:0.924;0.662 FUNCTIONAL_SNP rs4711207 chr6 30005754 Intergenic 7 62687 CEU:1.0;1.0, CHB:1.0;0.772, JPT:0.931;0.867 FUNCTIONAL_SNP rs4713281 chr6 29978352 Intergenic 7 35285 CEU:1.0;1.0, CHB:1.0;0.764, JPT:0.931;0.867 FUNCTIONAL_SNP rs9393987 chr6 30009169 Intergenic 7 66102 CEU:1.0;1.0, CHB:1.0;0.725, JPT:1.0;0.919 FUNCTIONAL_SNP rs2517840 chr6 29826092 Intergenic 7 116975 CEU:1.0;1.0, JPT:0.926;0.706 FUNCTIONAL_SNP rs9261431 chr6 30086422 Intergenic 7 143355 CEU:1.0;0.956 FUNCTIONAL_SNP rs2844821 chr6 29838642 Intergenic 7 104425 CEU:1.0;1.0, CHB:0.737;0.543, JPT:0.926;0.706 FUNCTIONAL_SNP rs12195207 chr6 29938507 Intergenic 7 4560 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;1.0 LEAD_SNP rs7758512 chr6 29970589 Intergenic 6 ASSOCIATION 20041166 HIV-1 control 7.69897000434 HCP5P2 FUNCTIONAL_SNP rs9261291 chr6 30038712 Coding 5b 68123 CEU:1.0;1.0, CHB:1.0;0.671, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2074482 chr6 30036471 Coding 6 65882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2074479 chr6 30041009 Coding 5b 70420 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261145 chr6 29984865 Exon,non-coding 6 14276 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6926792 chr6 29985849 Exon,non-coding 6 15260 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6931776 chr6 29986427 Exon,non-coding 6 15838 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3765604 chr6 29976024 Exon,non-coding 6 5435 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261105 chr6 29974500 Intron 2b 3911 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7750514 chr6 29974000 Intergenic 2b 3411 CEU:1.0;0.824, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261204 chr6 30005243 Intergenic 4 34654 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2286405 chr6 29973392 Intergenic 4 2803 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3765606 chr6 29975950 Intron 5a 5361 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261217 chr6 30010508 Intergenic 5b 39919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261302 chr6 30042349 Intron 5b 71760 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3869067 chr6 30003797 Intergenic 5b 33208 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6910507 chr6 29962926 Intergenic 5b 7663 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6930993 chr6 29962890 Intergenic 5b 7699 CEU:1.0;0.864, CHB:1.0;0.794, JPT:1.0;0.833, YRI:1.0;0.91 FUNCTIONAL_SNP rs6910898 chr6 29963179 Intergenic 5b 7410 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2074480 chr6 30040810 Intron 5b 70221 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9260994 chr6 29962796 Intergenic 5b 7793 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261012 chr6 29964903 Intergenic 5b 5686 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261103 chr6 29973135 Intergenic 6 2546 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261116 chr6 29978057 Intergenic 6 7468 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261129 chr6 29979579 Intergenic 6 8990 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261174 chr6 29996855 Intron 6 26266 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261187 chr6 29999326 Intron 6 28737 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261189 chr6 30000280 Intron 6 29691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261201 chr6 30004259 Intergenic 6 33670 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261216 chr6 30010139 Intergenic 6 39550 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3869068 chr6 30004052 Intergenic 6 33463 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7770811 chr6 29960359 Intergenic 6 10230 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261185 chr6 29999251 Intron 6 28662 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6911279 chr6 29965344 Intergenic 6 5245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7746866 chr6 29998182 Intron 6 27593 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6919617 chr6 29991699 Intron 6 21110 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6911737 chr6 29965501 Intergenic 6 5088 CEU:1.0;1.0, CHB:1.0;0.686, JPT:1.0;1.0, YRI:1.0;0.82 FUNCTIONAL_SNP rs6905157 chr6 29971548 Intergenic 6 959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9260967 chr6 29961367 Intergenic 6 9222 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9260968 chr6 29961439 Intergenic 6 9150 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9260975 chr6 29961722 Intergenic 6 8867 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9260977 chr6 29961784 Intergenic 6 8805 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9260978 chr6 29961853 Intergenic 6 8736 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9260982 chr6 29962067 Intergenic 6 8522 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9260987 chr6 29962398 Intergenic 6 8191 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.874 FUNCTIONAL_SNP rs9260988 chr6 29962515 Intergenic 6 8074 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261000 chr6 29963829 Intergenic 6 6760 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261004 chr6 29964253 Intergenic 6 6336 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261008 chr6 29964467 Intergenic 6 6122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261013 chr6 29964948 Intergenic 6 5641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261016 chr6 29965306 Intergenic 6 5283 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261020 chr6 29965671 Intergenic 6 4918 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261023 chr6 29965841 Intergenic 6 4748 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261024 chr6 29965913 Intergenic 6 4676 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261026 chr6 29965973 Intergenic 6 4616 CEU:1.0;0.865, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9261049 chr6 29967225 Intergenic 6 3364 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7760299 chr6 29997833 Intron 7 27244 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6941318 chr6 29966850 Intergenic 7 3739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7751116 chr6 29990844 Intron 7 20255 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs259919 chr6 30025503 Intergenic 6 ASSOCIATION 20041166 HIV-1 control 6.52287874528 ZNRD1AS LEAD_SNP rs8321 chr6 30032522 Exon,non-coding 6 ASSOCIATION 19115949 AIDS progression 6.30102999566 ZNRD1 LEAD_SNP rs34704616 chr6 30080369 Coding 7 ASSOCIATION 20125193 Cognitive test performance 5.22184874962 TRIM31 LEAD_SNP rs10947055 chr6 30093364 Intergenic 7 ASSOCIATION 21348951 Cardiac hypertrophy 6.69897000434 TRIM31 - TRIM40 FUNCTIONAL_SNP rs9468692 chr6 30119890 Exon,non-coding 2b 26526 CEU:1.0;1.0, YRI:1.0;0.838 FUNCTIONAL_SNP rs9468693 chr6 30120637 Exon,non-coding 6 27273 CEU:1.0;1.0, YRI:1.0;0.771 FUNCTIONAL_SNP rs1018846 chr6 30137649 Intron 2b 44285 CEU:1.0;1.0, YRI:1.0;0.838 FUNCTIONAL_SNP rs10947056 chr6 30095603 Intergenic 5b 2239 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10456378 chr6 30206186 Intron 5b 112822 CEU:1.0;1.0 FUNCTIONAL_SNP rs10947058 chr6 30176122 Intron 5b 82758 CEU:1.0;1.0, YRI:1.0;0.522 FUNCTIONAL_SNP rs11753736 chr6 30159266 Intron 6 65902 CEU:1.0;1.0 FUNCTIONAL_SNP rs6942037 chr6 30170699 Intron 6 77335 CEU:1.0;1.0 FUNCTIONAL_SNP rs1318638 chr6 30127873 Intron 6 34509 CEU:1.0;1.0, YRI:1.0;0.838 FUNCTIONAL_SNP rs12202131 chr6 30113550 Intron 7 20186 CEU:1.0;1.0 FUNCTIONAL_SNP rs6920344 chr6 30155053 Intron 7 61689 CEU:1.0;1.0 FUNCTIONAL_SNP rs13212414 chr6 30140540 Intergenic 7 47176 CEU:1.0;1.0 LEAD_SNP rs9468692 chr6 30119890 Exon,non-coding 2b ASSOCIATION 20041166 HIV-1 control 6.0 TRIM10 FUNCTIONAL_SNP rs9468693 chr6 30120637 Exon,non-coding 6 747 CEU:1.0;1.0, YRI:1.0;0.92 FUNCTIONAL_SNP rs1018846 chr6 30137649 Intron 2b 17759 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10947056 chr6 30095603 Intergenic 5b 24287 CEU:1.0;1.0, YRI:1.0;0.838 FUNCTIONAL_SNP rs10456378 chr6 30206186 Intron 5b 86296 CEU:1.0;1.0 FUNCTIONAL_SNP rs10947058 chr6 30176122 Intron 5b 56232 CEU:1.0;1.0 FUNCTIONAL_SNP rs11753736 chr6 30159266 Intron 6 39376 CEU:1.0;1.0 FUNCTIONAL_SNP rs6942037 chr6 30170699 Intron 6 50809 CEU:1.0;1.0 FUNCTIONAL_SNP rs1318638 chr6 30127873 Intron 6 7983 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13212414 chr6 30140540 Intergenic 7 20650 CEU:1.0;1.0 FUNCTIONAL_SNP rs6920344 chr6 30155053 Intron 7 35163 CEU:1.0;1.0 FUNCTIONAL_SNP rs12202131 chr6 30113550 Intron 7 6340 CEU:1.0;1.0 FUNCTIONAL_SNP rs10947055 chr6 30093364 Intergenic 7 26526 CEU:1.0;1.0, YRI:1.0;0.838 LEAD_SNP rs12526186 chr6 30736151 Intron 7 ASSOCIATION 19721433 Response to antipsychotic treatment 5.52287874528 IER3 - DDR1 FUNCTIONAL_SNP rs28780111 chr6 30720311 Intergenic 2b 15840 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13214831 chr6 30731505 Intergenic 4 4646 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3869075 chr6 30727282 Intergenic 4 8869 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17481190 chr6 30743014 Intron 4 6863 CEU:1.0;1.0, CHB:1.0;0.86, JPT:1.0;0.851, YRI:1.0;1.0 LEAD_SNP rs7756521 chr6 30848253 Intergenic 5b ASSOCIATION 20041166 HIV-1 control 6.0 IER3 - DDR1 FUNCTIONAL_SNP rs1049622 chr6 30858857 Coding 5b 10604 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2286656 chr6 30899571 Coding 5b 51318 CEU:1.0;0.936, JPT:1.0;0.535, YRI:1.0;0.637 FUNCTIONAL_SNP rs2229933 chr6 30857072 Coding 5b 8819 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2285319 chr6 30887972 Coding 5b 39719 CEU:1.0;1.0, CHB:1.0;0.785, JPT:1.0;0.952, YRI:1.0;0.789 FUNCTIONAL_SNP rs9394021 chr6 30893127 Coding 5b 44874 CEU:1.0;1.0, CHB:1.0;0.789, JPT:1.0;0.952, YRI:1.0;0.782 FUNCTIONAL_SNP rs2074511 chr6 30889389 Coding 5b 41136 CEU:1.0;0.936, CHB:1.0;0.789, JPT:1.0;0.952, YRI:1.0;0.637 FUNCTIONAL_SNP rs1419693 chr6 30877760 Coding 6 29507 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2267641 chr6 30865204 Coding 5b 16951 CEU:0.935;0.874, JPT:1.0;0.553, YRI:1.0;0.634 FUNCTIONAL_SNP rs1052693 chr6 30876152 Exon,non-coding 4 27899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1049628 chr6 30867106 Exon,non-coding 5b 18853 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8408 chr6 30867666 Exon,non-coding 5b 19413 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12190030 chr6 30921364 Exon,non-coding 6 73111 CEU:0.935;0.875 FUNCTIONAL_SNP rs2074510 chr6 30876034 Exon,non-coding 4 27781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7743661 chr6 30858254 Exon,non-coding 5b 10001 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs4713402 chr6 30899233 Exon,non-coding 7 50980 CEU:1.0;0.929, CHB:1.0;0.82, JPT:1.0;0.95, YRI:1.0;0.616 FUNCTIONAL_SNP rs9468842 chr6 30852747 Exon,non-coding 4 4494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2239518 chr6 30865725 Intron 2b 17472 CEU:1.0;0.936, CHB:1.0;0.789, JPT:1.0;0.952, YRI:1.0;0.637 FUNCTIONAL_SNP rs6901464 chr6 30854090 Intron 2b 5837 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9295928 chr6 30823630 Intergenic 3a 24623 CEU:1.0;0.933, JPT:1.0;0.535 FUNCTIONAL_SNP rs2284175 chr6 30875145 Intergenic 4 26892 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2284176 chr6 30875622 Intergenic 4 27369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4711249 chr6 30908266 Intergenic 4 60013 CEU:1.0;0.936, CHB:1.0;0.686, JPT:0.888;0.681, YRI:0.938;0.593 FUNCTIONAL_SNP rs9461638 chr6 30851305 Intron 4 3052 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs9468846 chr6 30870763 Intergenic 4 22510 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3916232 chr6 30823366 Intergenic 5a 24887 CEU:1.0;0.936, JPT:1.0;0.535, YRI:1.0;0.601 FUNCTIONAL_SNP rs9468843 chr6 30867958 Intergenic 5b 19705 CEU:1.0;0.936, JPT:1.0;0.535 FUNCTIONAL_SNP rs9468844 chr6 30868233 Intergenic 5b 19980 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2239517 chr6 30865115 Intron 5b 16862 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10947114 chr6 30902181 Intergenic 5b 53928 CEU:1.0;0.936, YRI:1.0;0.674 FUNCTIONAL_SNP rs3873334 chr6 30896147 Intergenic 5b 47894 CEU:1.0;1.0, CHB:1.0;0.789, JPT:1.0;0.952, YRI:1.0;0.789 FUNCTIONAL_SNP rs9295930 chr6 30849822 Intron 5b 1569 CEU:1.0;0.936, JPT:1.0;0.535 FUNCTIONAL_SNP rs9295932 chr6 30870463 Intergenic 5b 22210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2286655 chr6 30899746 Intron 5b 51493 CEU:1.0;0.936, CHB:1.0;0.789, JPT:1.0;0.952, YRI:1.0;0.637 FUNCTIONAL_SNP rs2894055 chr6 30868628 Intergenic 5b 20375 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3213644 chr6 30861225 Intron 5b 12972 CEU:1.0;0.936, CHB:1.0;0.789, JPT:1.0;0.95, YRI:1.0;0.634 FUNCTIONAL_SNP rs9501032 chr6 30850191 Intron 5b 1938 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs2074508 chr6 30876438 Intron 5b 28185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3869086 chr6 30870168 Intergenic 5b 21915 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs916920 chr6 30877202 Intron 5b 28949 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6457282 chr6 30857988 Intron 5b 9735 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6924600 chr6 30857542 Intron 5b 9289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9295931 chr6 30869714 Intergenic 6 21461 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4618569 chr6 30855251 Intron 6 6998 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3218815 chr6 30878769 Intron 6 30516 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2074512 chr6 30878919 Intron 6 30666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3909130 chr6 30874165 Intergenic 7 25912 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13215409 chr6 30871619 Intergenic 7 23366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10947113 chr6 30902009 Intergenic 7 53756 CEU:1.0;0.936, YRI:1.0;0.637 FUNCTIONAL_SNP rs3873332 chr6 30895990 Intergenic 7 47737 CEU:1.0;0.936, CHB:1.0;0.789, JPT:1.0;0.951, YRI:1.0;0.635 FUNCTIONAL_SNP rs1362123 chr6 30876996 Intron 7 28743 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4711247 chr6 30895680 Intergenic 7 47427 CEU:1.0;1.0, CHB:1.0;0.789, JPT:1.0;0.952, YRI:1.0;0.777 FUNCTIONAL_SNP rs12697941 chr6 30904714 Intergenic 7 56461 CEU:1.0;0.936, YRI:1.0;0.637 FUNCTIONAL_SNP rs9501035 chr6 30912414 Intron 7 64161 CEU:1.0;0.936, CHB:1.0;0.686, JPT:0.888;0.681, YRI:0.938;0.593 FUNCTIONAL_SNP rs3218814 chr6 30878579 Intron 7 30326 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12206075 chr6 30871000 Intergenic 7 22747 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 LEAD_SNP rs9262632 chr6 31024808 Intron 6 ASSOCIATION 21051598 HIV-1 control 8.0 HCG22 FUNCTIONAL_SNP rs9262631 chr6 31024601 Exon,non-coding 7 207 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6457327 chr6 31074030 Intergenic 5b ASSOCIATION 20639881 Follicular lymphoma 5.15490195999 HCG22 - C6orf15 ASSOCIATION 19620980 Follicular lymphoma 10.3010299957 HCG22 - C6orf15 FUNCTIONAL_SNP rs2517448 chr6 31062667 Intergenic 2b 11363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.958 FUNCTIONAL_SNP rs2523873 chr6 31012263 Intergenic 4 61767 CEU:0.952;0.829, JPT:0.935;0.621 FUNCTIONAL_SNP rs2517527 chr6 31021547 Intergenic 6 52483 CEU:1.0;0.918, CHB:0.938;0.83, JPT:0.949;0.9, YRI:0.905;0.642 FUNCTIONAL_SNP rs2517538 chr6 31013541 Intergenic 6 60489 CEU:0.956;0.876, JPT:0.935;0.621, YRI:0.848;0.501 FUNCTIONAL_SNP rs2517552 chr6 31007590 Intergenic 6 66440 CEU:0.956;0.876, JPT:0.935;0.621 FUNCTIONAL_SNP rs3131927 chr6 31012996 Intergenic 6 61034 CEU:0.956;0.876, JPT:0.933;0.589 FUNCTIONAL_SNP rs3132562 chr6 31048992 Intergenic 6 25038 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:0.951;0.761 FUNCTIONAL_SNP rs2523856 chr6 31021630 Intergenic 6 52400 CEU:1.0;0.911, JPT:1.0;0.557, YRI:1.0;0.598 FUNCTIONAL_SNP rs2523857 chr6 31021504 Intergenic 6 52526 CEU:1.0;0.918 FUNCTIONAL_SNP rs2523870 chr6 31014116 Intergenic 6 59914 CEU:0.956;0.876, JPT:0.935;0.621, YRI:0.848;0.501 FUNCTIONAL_SNP rs2523872 chr6 31012730 Intergenic 6 61300 CEU:0.956;0.876, JPT:0.935;0.621, YRI:0.896;0.539 FUNCTIONAL_SNP rs6905484 chr6 31071254 Intergenic 7 2776 CEU:0.956;0.914, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3094212 chr6 31085770 Exon,non-coding 6 ASSOCIATION 20139978 Hematological and biochemical traits 8.15490195999 CDSN;PSORS1C1 FUNCTIONAL_SNP rs1042126 chr6 31084288 Coding 5b 1482 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3130982 chr6 31084075 Coding 5b 1695 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3130983 chr6 31084792 Coding 5b 978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3094214 chr6 31085382 Exon,non-coding 4 388 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3094217 chr6 31083656 Exon,non-coding 6 2114 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3094219 chr6 31083286 Exon,non-coding 5b 2484 CEU:1.0;0.956, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1042134 chr6 31083664 Exon,non-coding 6 2106 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1042141 chr6 31083466 Exon,non-coding 5b 2304 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1042147 chr6 31083156 Exon,non-coding 3a 2614 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1042149 chr6 31082960 Exon,non-coding 2b 2810 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3130986 chr6 31085563 Exon,non-coding 7 207 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3815087 chr6 31093587 Exon,non-coding 5b ASSOCIATION 20041166 HIV-1 control 7.09691001301 PSORS1C1 FUNCTIONAL_SNP rs9263699 chr6 31093699 Intron 5b 112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs13191519 chr6 31265752 Intron 5b 172165 CEU:1.0;0.836 FUNCTIONAL_SNP rs9263715 chr6 31095801 Intron 5b 2214 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs9263716 chr6 31095816 Intron 5b 2229 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs3909109 chr6 31096367 Intron 5b 2780 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs9468933 chr6 31265057 Intron 6 171470 CEU:1.0;0.837 FUNCTIONAL_SNP rs13216197 chr6 31271018 Intergenic 7 177431 CEU:1.0;0.855 FUNCTIONAL_SNP rs6932435 chr6 31095285 Intron 7 1698 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 LEAD_SNP rs3130573 chr6 31106268 Intron 5b ASSOCIATION 21750679 Systemic sclerosis 9.22184874962 PSORS1C1;PSORS1C2 LEAD_SNP rs9263739 chr6 31111356 Intron 5b ASSOCIATION 19915573 Ulcerative colitis 66.3979400087 CCHCR1 FUNCTIONAL_SNP rs12364 chr6 31110786 Coding 5b 570 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs1063646 chr6 31107648 Coding 5b 3708 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9263738 chr6 31109767 Intergenic 5b 1589 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7757012 chr6 31108562 Intergenic 5b 2794 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs9263749 chr6 31114515 Intron 6 3159 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6903261 chr6 31115307 Intron 6 3951 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3131018 chr6 31143582 Intron 5b ASSOCIATION 21051598 HIV-1 control 15.3979400087 PSORS1C3 LEAD_SNP rs1265181 chr6 31155785 Intergenic 5b ASSOCIATION 19169255 Psoriasis 0 - FUNCTIONAL_SNP rs1265178 chr6 31161229 Intergenic 4 5444 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6903896 chr6 31168029 Exon,non-coding 5b ASSOCIATION 20585627 Common traits (Other) 6.22184874962 HCG27 FUNCTIONAL_SNP rs9501057 chr6 31106516 Coding 5b 61513 CEU:1.0;1.0 FUNCTIONAL_SNP rs9501063 chr6 31133894 Coding 5b 34135 CEU:1.0;1.0 FUNCTIONAL_SNP rs9501062 chr6 31131707 Exon,non-coding 5b 36322 CEU:1.0;1.0 FUNCTIONAL_SNP rs11965454 chr6 31134591 Exon,non-coding 6 33438 CEU:1.0;1.0 FUNCTIONAL_SNP rs2072108 chr6 31107031 Exon,non-coding 4 60998 CEU:1.0;1.0 FUNCTIONAL_SNP rs2269713 chr6 31141127 Intron 5b 26902 CEU:1.0;1.0, JPT:1.0;0.516 FUNCTIONAL_SNP rs11967883 chr6 31112354 Intron 5b 55675 CEU:1.0;1.0 FUNCTIONAL_SNP rs9468898 chr6 31182383 Intergenic 5b 14354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs2285804 chr6 31107204 Intron 5b 60825 CEU:1.0;1.0 FUNCTIONAL_SNP rs2073718 chr6 31110969 Intron 5b 57060 CEU:1.0;1.0 FUNCTIONAL_SNP rs16898844 chr6 31109693 Intergenic 6 58336 CEU:1.0;1.0 FUNCTIONAL_SNP rs2240061 chr6 31114848 Intron 6 53181 CEU:1.0;1.0 FUNCTIONAL_SNP rs2073716 chr6 31122997 Intron 6 45032 CEU:1.0;1.0 LEAD_SNP rs3095254 chr6 31221668 Intergenic 6 ASSOCIATION 21738478 White blood cell types 10.2218487496 HCG27 - HLA-C LEAD_SNP rs13191343 chr6 31241109 Intergenic 4 ASSOCIATION 20953186 Psoriatic arthritis 71.6989700043 HLA-C FUNCTIONAL_SNP rs13207315 chr6 31241127 Intergenic 2b 18 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13191519 chr6 31265752 Intron 5b 24643 CEU:1.0;0.906, CHB:0.876;0.567, YRI:1.0;1.0 FUNCTIONAL_SNP rs9468933 chr6 31265057 Intron 6 23948 CEU:0.898;0.806 FUNCTIONAL_SNP rs12191877 chr6 31252925 Intergenic 6 11816 CEU:0.905;0.819, CHB:1.0;0.655, YRI:1.0;1.0 FUNCTIONAL_SNP rs10456057 chr6 31245534 Intergenic 6 4425 CEU:0.905;0.819, CHB:1.0;0.654, YRI:1.0;1.0 FUNCTIONAL_SNP rs13208617 chr6 31248819 Intergenic 7 7710 CEU:1.0;0.907, CHB:0.877;0.568, YRI:1.0;1.0 FUNCTIONAL_SNP rs7751729 chr6 31271936 Intergenic 7 30827 CEU:0.906;0.821 FUNCTIONAL_SNP rs13200571 chr6 31271511 Intergenic 7 30402 CEU:0.906;0.821, CHB:0.887;0.594, YRI:1.0;1.0 FUNCTIONAL_SNP rs13203895 chr6 31244082 Intergenic 7 2973 CEU:0.906;0.821, CHB:1.0;0.678, YRI:1.0;1.0 FUNCTIONAL_SNP rs10484554 chr6 31274555 Intergenic 7 33446 CEU:0.905;0.819, CHB:1.0;0.654 LEAD_SNP rs2524054 chr6 31252396 Intergenic 6 ASSOCIATION 20045101 CD4:CD8 lymphocyte ratio 20.2218487496 RPL3P2 - WASF5P ASSOCIATION 20045101 CD4:CD8 lymphocyte ratio 27.6989700043 RPL3P2 - WASF5P FUNCTIONAL_SNP rs7767581 chr6 31239855 Exon,non-coding 4 12541 CEU:0.955;0.805, CHB:0.924;0.795, JPT:0.915;0.719 FUNCTIONAL_SNP rs9264604 chr6 31237450 Intron 3a 14946 CEU:1.0;0.956, CHB:0.913;0.833, JPT:0.846;0.666 FUNCTIONAL_SNP rs9264603 chr6 31237438 Intron 3a 14958 CEU:0.955;0.802, CHB:0.925;0.748, JPT:0.773;0.597 FUNCTIONAL_SNP rs9264664 chr6 31239227 Intron 4 13169 CEU:0.958;0.815, CHB:0.928;0.804, JPT:0.911;0.621 FUNCTIONAL_SNP rs9264636 chr6 31238297 Intron 4 14099 CEU:0.951;0.825, CHB:0.92;0.734, JPT:0.779;0.566 FUNCTIONAL_SNP rs9264594 chr6 31237048 Intron 4 15348 CEU:0.955;0.805, CHB:0.923;0.699 FUNCTIONAL_SNP rs2844622 chr6 31240060 Intergenic 4 12336 CEU:0.954;0.869, CHB:0.929;0.863, JPT:1.0;0.903 FUNCTIONAL_SNP rs9264602 chr6 31237406 Intron 4 14990 CEU:0.956;0.839, CHB:0.923;0.794, JPT:0.914;0.716 FUNCTIONAL_SNP rs9264647 chr6 31238613 Intron 5a 13783 CEU:0.958;0.815, CHB:0.928;0.804, JPT:0.914;0.717 FUNCTIONAL_SNP rs9264606 chr6 31237592 Intron 5a 14804 CEU:0.956;0.808, CHB:0.926;0.75, JPT:0.785;0.54 FUNCTIONAL_SNP rs9264608 chr6 31237660 Intron 5a 14736 CEU:0.956;0.839, CHB:0.924;0.747, JPT:0.78;0.609 FUNCTIONAL_SNP rs2524060 chr6 31267422 Intron 5b 15026 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.935, YRI:1.0;0.576 FUNCTIONAL_SNP rs2853928 chr6 31257511 Intergenic 6 5115 CEU:1.0;0.96, CHB:0.93;0.864, JPT:1.0;0.808, YRI:1.0;0.867 FUNCTIONAL_SNP rs6457374 chr6 31272261 Intergenic 6 19865 CEU:1.0;0.958, CHB:0.922;0.85, JPT:1.0;0.788, YRI:1.0;1.0 FUNCTIONAL_SNP rs2247056 chr6 31265490 Intron 6 13094 CEU:1.0;0.958, CHB:0.926;0.857, JPT:1.0;0.788, YRI:1.0;0.762 FUNCTIONAL_SNP rs2524074 chr6 31244021 Intergenic 6 8375 CEU:1.0;0.958, CHB:0.926;0.857, JPT:1.0;0.788 FUNCTIONAL_SNP rs2523578 chr6 31328542 Intergenic 6 76146 CEU:1.0;0.84 FUNCTIONAL_SNP rs2844611 chr6 31243979 Intergenic 6 8417 CEU:0.954;0.911, CHB:1.0;0.924, JPT:0.895;0.664 FUNCTIONAL_SNP rs2844612 chr6 31243971 Intergenic 6 8425 CEU:0.96;0.922, CHB:0.913;0.833, JPT:1.0;0.766 FUNCTIONAL_SNP rs2524142 chr6 31263522 Intron 6 11126 CEU:1.0;0.96, CHB:0.93;0.864, JPT:1.0;0.808, YRI:1.0;0.681 LEAD_SNP rs12191877 chr6 31252925 Intergenic 6 ASSOCIATION 20953188 Psoriasis 31.3979400087 RPL3P2 - WASF5P ASSOCIATION 19169254 Psoriasis 100.0 RPL3P2 - WASF5P FUNCTIONAL_SNP rs13207315 chr6 31241127 Intergenic 2b 11798 CEU:0.912;0.831, CHB:1.0;0.656, YRI:1.0;1.0 FUNCTIONAL_SNP rs13191343 chr6 31241109 Intergenic 4 11816 CEU:0.905;0.819, CHB:1.0;0.655, YRI:1.0;1.0 FUNCTIONAL_SNP rs13191519 chr6 31265752 Intron 5b 12827 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9468929 chr6 31263216 Intron 6 10291 CEU:1.0;0.913, CHB:1.0;0.72, JPT:1.0;1.0 FUNCTIONAL_SNP rs9468933 chr6 31265057 Intron 6 12132 CEU:1.0;1.0, CHB:1.0;0.721, JPT:1.0;1.0 FUNCTIONAL_SNP rs10456057 chr6 31245534 Intergenic 6 7391 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13208617 chr6 31248819 Intergenic 7 4106 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7751729 chr6 31271936 Intergenic 7 19011 CEU:1.0;1.0, CHB:1.0;0.721, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs13200571 chr6 31271511 Intergenic 7 18586 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13200073 chr6 31271008 Intergenic 7 18083 CEU:1.0;0.837, CHB:1.0;0.544, JPT:1.0;1.0 FUNCTIONAL_SNP rs10484554 chr6 31274555 Intergenic 7 21630 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs13203895 chr6 31244082 Intergenic 7 8843 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13216197 chr6 31271018 Intergenic 7 18093 CEU:1.0;0.918, CHB:1.0;0.656, JPT:1.0;1.0 LEAD_SNP rs9468925 chr6 31258837 Intergenic 6 ASSOCIATION 20526339 Vitiligo 32.6989700043 WASF5P - HLA-B LEAD_SNP rs2894207 chr6 31263751 Intron 6 ASSOCIATION 20512145 Nasopharyngeal carcinoma 32.5228787453 WASF5P - HLA-B FUNCTIONAL_SNP rs9468932 chr6 31264823 Intron 7 1072 CEU:1.0;0.827, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9461688 chr6 31271716 Intergenic 6 ASSOCIATION 18464913 Protein quantitative trait loci 5.39794000867 WASF5P - HLA-B FUNCTIONAL_SNP rs11967472 chr6 31271285 Intergenic 6 431 CEU:0.937;0.877, CHB:1.0;0.938, JPT:1.0;0.847, YRI:1.0;0.922 FUNCTIONAL_SNP rs9468935 chr6 31269553 Intergenic 7 2163 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;0.804, YRI:1.0;1.0 FUNCTIONAL_SNP rs9468940 chr6 31271680 Intergenic 7 36 CEU:0.939;0.882, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.881 LEAD_SNP rs9264942 chr6 31274380 Intergenic 6 ASSOCIATION 21051598 HIV-1 control 34.5228787453 WASF5P - HLA-B ASSOCIATION 20041166 HIV-1 control 31.2218487496 WASF5P - HLA-B ASSOCIATION 20041166 HIV-1 control 11.2218487496 WASF5P - HLA-B LEAD_SNP rs10484554 chr6 31274555 Intergenic 7 ASSOCIATION 20953190 Psoriasis 213.397940009 WASF5P - HLA-B ASSOCIATION 19115949 AIDS progression 7.22184874962 WASF5P - HLA-B ASSOCIATION 18369459 Psoriasis 38.6989700043 WASF5P - HLA-B FUNCTIONAL_SNP rs13207315 chr6 31241127 Intergenic 2b 33428 CEU:0.911;0.831, CHB:1.0;0.655, YRI:1.0;0.66 FUNCTIONAL_SNP rs13191343 chr6 31241109 Intergenic 4 33446 CEU:0.905;0.819, CHB:1.0;0.654 FUNCTIONAL_SNP rs13191519 chr6 31265752 Intron 5b 8803 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs9468929 chr6 31263216 Intron 6 11339 CEU:1.0;0.912, CHB:1.0;0.719, JPT:1.0;1.0 FUNCTIONAL_SNP rs9468933 chr6 31265057 Intron 6 9498 CEU:1.0;1.0, CHB:1.0;0.72, JPT:1.0;1.0 FUNCTIONAL_SNP rs12191877 chr6 31252925 Intergenic 6 21630 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs10456057 chr6 31245534 Intergenic 6 29021 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs13208617 chr6 31248819 Intergenic 7 25736 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs7751729 chr6 31271936 Intergenic 7 2619 CEU:1.0;1.0, CHB:1.0;0.72, JPT:1.0;1.0 FUNCTIONAL_SNP rs13200571 chr6 31271511 Intergenic 7 3044 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs13200073 chr6 31271008 Intergenic 7 3547 CEU:1.0;0.836, CHB:1.0;0.543, JPT:1.0;1.0 FUNCTIONAL_SNP rs13203895 chr6 31244082 Intergenic 7 30473 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs13216197 chr6 31271018 Intergenic 7 3537 CEU:1.0;0.918, CHB:1.0;0.655, JPT:1.0;1.0 LEAD_SNP rs3134792 chr6 31312326 Intergenic 6 ASSOCIATION 18364390 Psoriasis 9.0 WASF5P - HLA-B LEAD_SNP rs2523608 chr6 31322559 Intron 4 ASSOCIATION 21051598 HIV-1 control 19.0457574906 HLA-B ASSOCIATION 20205591 HIV-1 control 5.52287874528 HLA-B LEAD_SNP rs2523590 chr6 31327064 Intergenic 6 ASSOCIATION 21051598 HIV-1 control 12.6989700043 HLA-B - DHFRP2 FUNCTIONAL_SNP rs2523586 chr6 31327435 Intergenic 5b 371 CEU:1.0;0.812, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.576 LEAD_SNP rs7743761 chr6 31336100 Intergenic 5b ASSOCIATION 20062062 Ankylosing spondylitis 303.301029996 DHFRP2 - HLA-S FUNCTIONAL_SNP rs6457401 chr6 31334852 Intergenic 2a 1248 CEU:1.0;0.927, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6457402 chr6 31334864 Intergenic 4 1236 CEU:1.0;0.927, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9501572 chr6 31333820 Intergenic 5b 2280 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9501374 chr6 31332332 Intergenic 6 3768 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13215664 chr6 31337311 Intergenic 6 1211 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13437082 chr6 31354560 Intergenic 6 ASSOCIATION 19343178 Height 7.30102999566 HLA-S - MICA FUNCTIONAL_SNP rs13437088 chr6 31355119 Intergenic 4 559 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13437092 chr6 31355056 Intergenic 4 496 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7751725 chr6 31360433 Intergenic 5b 5873 CEU:1.0;1.0, CHB:1.0;0.898, JPT:1.0;0.935, YRI:1.0;0.962 FUNCTIONAL_SNP rs10947208 chr6 31361837 Intergenic 5b 7277 CEU:1.0;1.0, CHB:1.0;0.895, JPT:1.0;0.935, YRI:1.0;0.962 FUNCTIONAL_SNP rs4711269 chr6 31354819 Intergenic 5b 259 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10947206 chr6 31361397 Intergenic 6 6837 CEU:1.0;1.0, CHB:1.0;0.895, JPT:1.0;0.935, YRI:1.0;0.962 FUNCTIONAL_SNP rs7752021 chr6 31360526 Intergenic 6 5966 CEU:1.0;1.0, CHB:1.0;0.892, JPT:1.0;0.935, YRI:1.0;0.962 FUNCTIONAL_SNP rs4711268 chr6 31354504 Intergenic 6 56 CEU:1.0;1.0, CHB:1.0;0.849, JPT:1.0;0.935, YRI:1.0;0.889 FUNCTIONAL_SNP rs7751505 chr6 31360255 Intergenic 7 5695 CEU:1.0;1.0, CHB:1.0;0.898, JPT:1.0;0.935, YRI:1.0;0.962 LEAD_SNP rs4349859 chr6 31365787 Intergenic 4 ASSOCIATION 21743469 Ankylosing spondylitis 200.0 HLA-S - MICA FUNCTIONAL_SNP rs9391822 chr6 31280746 Intergenic 7 85041 CEU:1.0;1.0 LEAD_SNP rs2596542 chr6 31366595 Intergenic 6 ASSOCIATION 21499248 Hepatocellular carcinoma 12.3979400087 HLA-S - MICA FUNCTIONAL_SNP rs2596541 chr6 31367838 Exon,non-coding 4 1243 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2523452 chr6 31368540 Exon,non-coding 4 1945 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2523453 chr6 31368125 Exon,non-coding 5b 1530 CEU:1.0;1.0, CHB:1.0;0.837, JPT:1.0;0.943, YRI:1.0;0.894 FUNCTIONAL_SNP rs9501387 chr6 31364459 Intergenic 2b 2136 CEU:1.0;1.0, CHB:1.0;0.842, JPT:1.0;0.943, YRI:1.0;0.896 FUNCTIONAL_SNP rs2251731 chr6 31367365 Intergenic 4 770 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2853973 chr6 31353992 Intergenic 5b 12603 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;1.0, YRI:0.963;0.928 FUNCTIONAL_SNP rs2844521 chr6 31368964 Intron 5b 2369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2523473 chr6 31361897 Intergenic 5b 4698 CEU:1.0;1.0, CHB:1.0;0.842, JPT:1.0;0.943, YRI:1.0;0.896 FUNCTIONAL_SNP rs2428475 chr6 31366622 Intergenic 6 27 CEU:1.0;1.0, CHB:1.0;0.842, JPT:1.0;0.943, YRI:1.0;0.896 FUNCTIONAL_SNP rs2523467 chr6 31362930 Intergenic 6 3665 CEU:1.0;1.0, CHB:1.0;0.842, JPT:1.0;0.943, YRI:1.0;0.896 FUNCTIONAL_SNP rs2523475 chr6 31361710 Intergenic 6 4885 CEU:1.0;1.0, CHB:1.0;0.842, JPT:1.0;0.943, YRI:1.0;0.896 FUNCTIONAL_SNP rs2428474 chr6 31367023 Intergenic 6 428 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs2523459 chr6 31365308 Intergenic 6 1287 CEU:1.0;1.0, CHB:1.0;0.842, JPT:1.0;0.943, YRI:1.0;0.896 LEAD_SNP rs1063635 chr6 31379931 Coding 6 ASSOCIATION 21653640 Rheumatoid arthritis 17.0 MICA FUNCTIONAL_SNP rs2256175 chr6 31380449 Intron 5b 518 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2844513 chr6 31388214 Intron 6 8283 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4418214 chr6 31391401 Intron 5a ASSOCIATION 21051598 HIV-1 control 34.0 MICA - HLA-X LEAD_SNP rs2255221 chr6 31431691 Exon,non-coding 4 ASSOCIATION 21051598 HIV-1 control 13.3979400087 HCP5 FUNCTIONAL_SNP rs2516518 chr6 31435119 Intergenic 6 3428 CEU:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2395029 chr6 31431780 Exon,non-coding 5a ASSOCIATION 21051598 HIV-1 control 25.0 HCP5 ASSOCIATION 20041166 HIV-1 control 11.0 HCP5 ASSOCIATION 20041166 HIV-1 control 34.3010299957 HCP5 ASSOCIATION 19483685 Drug-induced liver injury (flucloxacillin) 32.0457574906 HCP5 ASSOCIATION 19115949 AIDS progression 18.5228787453 HCP5 ASSOCIATION 18369459 Psoriasis 25.6989700043 HCP5 FUNCTIONAL_SNP rs3828917 chr6 31465917 Exon,non-coding 4 34137 CEU:1.0;1.0 FUNCTIONAL_SNP rs3021366 chr6 31445771 Intergenic 7 13991 CEU:1.0;1.0 FUNCTIONAL_SNP rs4959077 chr6 31475628 Intron 7 43848 CEU:1.0;1.0 LEAD_SNP rs3099844 chr6 31448976 Intergenic 6 ASSOCIATION 20662065 Neonatal lupus 9.30102999566 HCG26 - MICB FUNCTIONAL_SNP rs3131643 chr6 31442782 Intergenic 4 6194 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.896;0.665 FUNCTIONAL_SNP rs3099840 chr6 31430721 Intron 4 18255 CEU:1.0;0.82, JPT:1.0;1.0 FUNCTIONAL_SNP rs9266669 chr6 31348077 Intergenic 4 100899 CEU:1.0;0.82 FUNCTIONAL_SNP rs3094013 chr6 31434366 Intergenic 5a 14610 CEU:1.0;1.0 FUNCTIONAL_SNP rs3131618 chr6 31434621 Intergenic 5a 14355 CEU:1.0;1.0 FUNCTIONAL_SNP rs3094604 chr6 31434111 Intergenic 5b 14865 CEU:1.0;0.82, JPT:1.0;1.0 FUNCTIONAL_SNP rs3132472 chr6 31386131 Intron 5b 62845 CEU:1.0;1.0 FUNCTIONAL_SNP rs2442735 chr6 31346653 Intergenic 5b 102323 CEU:1.0;1.0 FUNCTIONAL_SNP rs3094005 chr6 31465047 Intron 5b 16071 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs2734583 chr6 31505480 Intron 5b 56504 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.706 FUNCTIONAL_SNP rs2844559 chr6 31340075 Intergenic 6 108901 CEU:1.0;0.929 FUNCTIONAL_SNP rs3134792 chr6 31312326 Intergenic 6 136650 CEU:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs3094228 chr6 31429927 Intron 6 19049 CEU:1.0;0.82, JPT:1.0;1.0 FUNCTIONAL_SNP rs2596565 chr6 31353329 Intergenic 6 95647 CEU:1.0;0.933 FUNCTIONAL_SNP rs4143332 chr6 31348365 Intergenic 6 100611 CEU:1.0;0.93 FUNCTIONAL_SNP rs2922994 chr6 31335901 Intergenic 6 113075 CEU:1.0;0.933 FUNCTIONAL_SNP rs3130612 chr6 31482097 Intergenic 6 33121 CEU:1.0;1.0 FUNCTIONAL_SNP rs2844577 chr6 31334422 Intergenic 7 114554 CEU:1.0;0.912 FUNCTIONAL_SNP rs3132473 chr6 31408329 Intron 7 40647 CEU:1.0;1.0 FUNCTIONAL_SNP rs2156874 chr6 31335976 Intergenic 7 113000 CEU:1.0;0.933 FUNCTIONAL_SNP rs2596430 chr6 31335431 Intergenic 7 113545 CEU:1.0;0.933 FUNCTIONAL_SNP rs3094011 chr6 31451836 Intergenic 7 2860 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2844531 chr6 31353171 Intergenic 7 95805 CEU:1.0;0.926 FUNCTIONAL_SNP rs3130614 chr6 31476458 Intron 7 27482 CEU:1.0;1.0 LEAD_SNP rs2516399 chr6 31481299 Intergenic 5b ASSOCIATION 21738478 White blood cell types 11.6989700043 MICB - PPIAP9 FUNCTIONAL_SNP rs2246986 chr6 31482203 Intergenic 6 904 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2844496 chr6 31480398 Intergenic 6 901 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2844479 chr6 31572956 Intergenic 7 ASSOCIATION 19079260 Weight 7.69897000434 NCR3 - UQCRHP1 LEAD_SNP rs3117582 chr6 31620520 Intron 2b ASSOCIATION 19836008 Lung adenocarcinoma 11.3010299957 BAT3 ASSOCIATION 19654303 Lung cancer 9.39794000867 BAT3 ASSOCIATION 18978787 Lung cancer 9.30102999566 BAT3 FUNCTIONAL_SNP rs3130626 chr6 31598489 Coding 4 22031 CEU:1.0;0.828 FUNCTIONAL_SNP rs3115671 chr6 31734345 Coding 4 113825 CEU:1.0;1.0 FUNCTIONAL_SNP rs3115672 chr6 31727897 Coding 6 107377 CEU:1.0;1.0 FUNCTIONAL_SNP rs3130618 chr6 31632134 Coding 4 11614 CEU:1.0;0.828 FUNCTIONAL_SNP rs3117574 chr6 31725230 Exon,non-coding 7 104710 CEU:1.0;1.0 FUNCTIONAL_SNP rs3117579 chr6 31633496 Exon,non-coding 2b 12976 CEU:1.0;0.828 FUNCTIONAL_SNP rs3130679 chr6 31807540 Exon,non-coding 5b 187020 CEU:1.0;1.0 FUNCTIONAL_SNP rs3131383 chr6 31704294 Exon,non-coding 4 83774 CEU:1.0;1.0 FUNCTIONAL_SNP rs3131378 chr6 31725285 Exon,non-coding 6 104765 CEU:1.0;1.0 FUNCTIONAL_SNP rs3132450 chr6 31596138 Intron 4 24382 CEU:1.0;1.0 FUNCTIONAL_SNP rs3101018 chr6 31705864 Intron 4 85344 CEU:1.0;0.907 FUNCTIONAL_SNP rs3131379 chr6 31721033 Intron 4 100513 CEU:1.0;1.0 FUNCTIONAL_SNP rs3130623 chr6 31597700 Intron 4 22820 CEU:1.0;0.828 FUNCTIONAL_SNP rs3115674 chr6 31799076 Intergenic 5a 178556 CEU:1.0;1.0 FUNCTIONAL_SNP rs599707 chr6 31808436 Intergenic 5a 187916 CEU:1.0;1.0 FUNCTIONAL_SNP rs3130628 chr6 31609272 Intron 5b 11248 CEU:1.0;0.828 FUNCTIONAL_SNP rs3117583 chr6 31619576 Intron 5b 944 CEU:1.0;0.828 FUNCTIONAL_SNP rs2736157 chr6 31600820 Intron 5b 19700 CEU:1.0;0.828 FUNCTIONAL_SNP rs3132449 chr6 31626013 Intergenic 5b 5493 CEU:1.0;1.0 FUNCTIONAL_SNP rs3132445 chr6 31712196 Intron 5b 91676 CEU:1.0;1.0 FUNCTIONAL_SNP rs3130047 chr6 31610479 Intron 5b 10041 CEU:1.0;0.828 FUNCTIONAL_SNP rs915652 chr6 31749142 Intron 5b 128622 CEU:1.0;1.0 FUNCTIONAL_SNP rs3115663 chr6 31601843 Intron 5b 18677 CEU:1.0;0.828 FUNCTIONAL_SNP rs9267531 chr6 31636742 Intron 6 16222 CEU:1.0;1.0 FUNCTIONAL_SNP rs3130070 chr6 31591808 Intron 6 28712 CEU:1.0;0.828 FUNCTIONAL_SNP rs3130484 chr6 31715882 Intron 6 95362 CEU:1.0;1.0 FUNCTIONAL_SNP rs3117575 chr6 31726253 Intron 7 105733 CEU:1.0;1.0 FUNCTIONAL_SNP rs3117577 chr6 31727474 Intron 7 106954 CEU:1.0;1.0 LEAD_SNP rs3131379 chr6 31721033 Intron 4 ASSOCIATION 18204446 Systemic lupus erythematosus 51.6989700043 MSH5 LEAD_SNP rs9368699 chr6 31802541 Exon,non-coding 4 ASSOCIATION 20041166 HIV-1 control 7.30102999566 C6orf48 FUNCTIONAL_SNP rs28732157 chr6 31628216 Exon,non-coding 2b 174325 CEU:1.0;0.848, JPT:1.0;0.888 FUNCTIONAL_SNP rs28732165 chr6 31876647 Intron 2b 74106 CEU:1.0;0.848 FUNCTIONAL_SNP rs9378164 chr6 31643522 Intergenic 5a 159019 CEU:1.0;0.848, JPT:1.0;0.888 FUNCTIONAL_SNP rs4151664 chr6 31920873 Intron 5a 118332 CEU:1.0;1.0 FUNCTIONAL_SNP rs34241101 chr6 31936057 Intron 5b 133516 CEU:1.0;0.825 FUNCTIONAL_SNP rs2295663 chr6 31669295 Intron 6 133246 CEU:1.0;0.848, CHB:0.902;0.532, JPT:1.0;0.888 FUNCTIONAL_SNP rs9380266 chr6 31618723 Intron 7 183818 CEU:1.0;0.848, JPT:1.0;0.888 LEAD_SNP rs11966200 chr6 31837066 Intron 6 ASSOCIATION 20526339 Vitiligo 48.0 SLC44A4 LEAD_SNP rs494620 chr6 31838713 Coding 5b ASSOCIATION 19448619 Menopause (age at onset) 6.30102999566 SLC44A4 LEAD_SNP rs2736428 chr6 31843924 Intron 5b ASSOCIATION 20421499 Telomere length 5.52287874528 SLC44A4 FUNCTIONAL_SNP rs2844458 chr6 31851469 Intron 5b 7545 CEU:1.0;0.856, CHB:1.0;0.533, YRI:1.0;1.0 FUNCTIONAL_SNP rs2763982 chr6 31872551 Intron 6 28627 CEU:0.95;0.821, YRI:1.0;1.0 FUNCTIONAL_SNP rs614549 chr6 31840625 Intron 7 3299 CEU:0.952;0.827, CHB:1.0;0.901, JPT:1.0;0.952 LEAD_SNP rs9267665 chr6 31870856 Intron 5b ASSOCIATION 21764829 Hepatitis B vaccine response 17.0 ZBTB12 LEAD_SNP rs9267673 chr6 31883679 Intron 5b ASSOCIATION 21105107 Hepatocellular carcinoma 5.69897000434 ZBTB12 - C2 LEAD_SNP rs9332739 chr6 31903804 Coding 4 ASSOCIATION 21665990 Age-related macular degeneration 22.6989700043 C2 FUNCTIONAL_SNP rs4151667 chr6 31914024 Coding 4 10220 CEU:1.0;1.0, CHB:1.0;0.791, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4151669 chr6 31915144 Coding 3a 11340 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4151672 chr6 31919830 Exon,non-coding 7 16026 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4151671 chr6 31918903 Intron 5a 15099 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17201560 chr6 32047268 Intron 7 143464 CEU:1.0;0.866, YRI:1.0;1.0 LEAD_SNP rs9380272 chr6 31906010 Intron 7 ASSOCIATION 20385819 Age-related macular degeneration 7.69897000434 C2 LEAD_SNP rs641153 chr6 31914180 Coding 2b ASSOCIATION 21665990 Age-related macular degeneration 30.2218487496 CFB ASSOCIATION 20385826 Age-related macular degeneration 19.6989700043 CFB FUNCTIONAL_SNP rs438999 chr6 31928306 Coding 5b 14126 CEU:1.0;1.0, JPT:1.0;0.756, YRI:1.0;0.817 FUNCTIONAL_SNP rs760070 chr6 31919956 Exon,non-coding 6 5776 CEU:1.0;1.0, JPT:1.0;0.756, YRI:1.0;0.817 FUNCTIONAL_SNP rs522162 chr6 31919917 Exon,non-coding 6 5737 CEU:1.0;1.0, JPT:1.0;0.756, YRI:1.0;0.817 FUNCTIONAL_SNP rs497239 chr6 31908761 Intron 4 5419 CEU:1.0;0.825, JPT:1.0;0.756, YRI:1.0;0.817 FUNCTIONAL_SNP rs541862 chr6 31916951 Intron 4 2771 CEU:1.0;1.0, JPT:1.0;0.756, YRI:1.0;0.817 FUNCTIONAL_SNP rs550513 chr6 31920687 Intron 5a 6507 CEU:1.0;1.0, JPT:1.0;0.756, YRI:1.0;0.817 FUNCTIONAL_SNP rs609061 chr6 31910162 Intron 5b 4018 CEU:1.0;1.0, YRI:1.0;0.841 FUNCTIONAL_SNP rs653414 chr6 31907168 Intron 6 7012 CEU:1.0;0.825, JPT:1.0;0.756, YRI:1.0;0.817 FUNCTIONAL_SNP rs550605 chr6 31907147 Intron 7 7033 CEU:1.0;0.824, JPT:1.0;0.756, YRI:1.0;0.817 FUNCTIONAL_SNP rs547154 chr6 31910938 Intron 7 3242 CEU:1.0;1.0, JPT:1.0;0.756, YRI:1.0;0.817 FUNCTIONAL_SNP rs403569 chr6 31924880 Intron 7 10700 CEU:1.0;1.0, JPT:1.0;0.755 LEAD_SNP rs429608 chr6 31930462 Intron 5b ASSOCIATION 20861866 Age-related macular degeneration 14.3010299957 SKIV2L ASSOCIATION 20385819 Age-related macular degeneration 20.5228787453 SKIV2L LEAD_SNP rs12198173 chr6 32026808 Intron 5b ASSOCIATION 20041166 HIV-1 control 5.52287874528 TNXB FUNCTIONAL_SNP rs12211410 chr6 32049423 Coding 5b 22615 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;1.0, YRI:1.0;0.71 FUNCTIONAL_SNP rs34214527 chr6 32014456 Intron 2b 12352 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs13199524 chr6 32066765 Intron 5b 39957 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.71 FUNCTIONAL_SNP rs9267677 chr6 31892641 Intron 5b 134167 CEU:1.0;0.879, CHB:1.0;0.642, JPT:1.0;1.0 FUNCTIONAL_SNP rs2077580 chr6 32020844 Intron 7 5964 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs185819 chr6 32050067 Coding 5b ASSOCIATION 18391951 Height 7.52287874528 TNXB FUNCTIONAL_SNP rs2856448 chr6 32014575 Intron 4 35492 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1150754 chr6 32050758 Intron 4 ASSOCIATION 21408207 Systemic lupus erythematosus 28.2218487496 TNXB FUNCTIONAL_SNP rs1150755 chr6 32038550 Intron 5b 12208 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1150758 chr6 32028149 Intron 7 22609 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2269426 chr6 32076499 Intron 5b ASSOCIATION 19198610 Plasma eosinophil count 5.52287874528 TNXB LEAD_SNP rs2070600 chr6 32151443 Coding 5b ASSOCIATION 20010835 Pulmonary function 13.5228787453 AGER ASSOCIATION 20010834 Pulmonary function 14.5228787453 AGER FUNCTIONAL_SNP rs2022059 chr6 32156489 Intron 2b 5046 CEU:1.0;1.0 FUNCTIONAL_SNP rs2071285 chr6 32180431 Intron 5b 28988 CEU:1.0;1.0 FUNCTIONAL_SNP rs2856437 chr6 32157364 Intron 5b 5921 CEU:1.0;1.0 FUNCTIONAL_SNP rs2854050 chr6 32185605 Intron 6 34162 CEU:1.0;1.0 FUNCTIONAL_SNP rs8192575 chr6 32166384 Intron 6 14941 CEU:1.0;1.0 FUNCTIONAL_SNP rs2854047 chr6 32179432 Intron 6 27989 CEU:1.0;1.0 FUNCTIONAL_SNP rs10947233 chr6 32124424 Intron 7 27019 CEU:1.0;1.0, CHB:0.94;0.834, JPT:1.0;0.91 FUNCTIONAL_SNP rs2555469 chr6 32179494 Intron 7 28051 CEU:1.0;1.0 LEAD_SNP rs3131296 chr6 32172993 Intron 5a ASSOCIATION 19571808 Schizophrenia 9.69897000434 NOTCH4 FUNCTIONAL_SNP rs1265754 chr6 32303692 Coding 7 130699 CEU:1.0;0.899 FUNCTIONAL_SNP rs7775397 chr6 32261252 Coding 7 88259 CEU:1.0;0.899 FUNCTIONAL_SNP rs1150752 chr6 32064726 Coding 4 108267 CEU:1.0;1.0 FUNCTIONAL_SNP rs3134942 chr6 32168771 Coding 5b 4222 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3130288 chr6 32096001 Exon,non-coding 2b 76992 CEU:1.0;1.0 FUNCTIONAL_SNP rs433061 chr6 32014828 Intron 2b 158165 CEU:1.0;1.0 FUNCTIONAL_SNP rs2071278 chr6 32165444 Intron 4 7549 CEU:1.0;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs3129950 chr6 32358201 Intergenic 5b 185208 CEU:1.0;0.899 FUNCTIONAL_SNP rs3096690 chr6 32194630 Intergenic 5b 21637 CEU:1.0;0.899 FUNCTIONAL_SNP rs9268235 chr6 32290208 Intron 6 117215 CEU:1.0;0.899 FUNCTIONAL_SNP rs2395149 chr6 32325562 Intron 6 152569 CEU:1.0;0.89 FUNCTIONAL_SNP rs3129927 chr6 32333827 Intron 6 160834 CEU:1.0;0.89 FUNCTIONAL_SNP rs3130297 chr6 32198981 Intergenic 6 25988 CEU:1.0;1.0 FUNCTIONAL_SNP rs1150753 chr6 32059867 Intron 6 113126 CEU:1.0;1.0 FUNCTIONAL_SNP rs377763 chr6 32199144 Intergenic 6 26151 CEU:0.898;0.806 FUNCTIONAL_SNP rs2894254 chr6 32345689 Intron 6 172696 CEU:1.0;0.899 FUNCTIONAL_SNP rs9268208 chr6 32280591 Intron 6 107598 CEU:1.0;0.899 FUNCTIONAL_SNP rs3132956 chr6 32179438 Intron 7 6445 CEU:1.0;0.865, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268144 chr6 32257199 Intron 7 84206 CEU:1.0;0.899 FUNCTIONAL_SNP rs3132971 chr6 32230256 Intron 7 57263 CEU:1.0;0.899 FUNCTIONAL_SNP rs3117103 chr6 32349557 Intron 7 176564 CEU:1.0;0.899 FUNCTIONAL_SNP rs3117106 chr6 32343369 Intron 7 170376 CEU:1.0;0.899 FUNCTIONAL_SNP rs1269852 chr6 32080191 Intron 7 92802 CEU:1.0;1.0 FUNCTIONAL_SNP rs6901158 chr6 32205942 Intergenic 7 32949 CEU:1.0;0.899, CHB:1.0;0.822 FUNCTIONAL_SNP rs9268177 chr6 32274882 Intron 7 101889 CEU:1.0;0.89 FUNCTIONAL_SNP rs9268219 chr6 32284108 Intron 7 111115 CEU:1.0;0.899 LEAD_SNP rs3115573 chr6 32218843 Intergenic 6 ASSOCIATION 20595679 Nephropathy 9.0 NOTCH4 - C6orf10 FUNCTIONAL_SNP rs2022533 chr6 32307260 Coding 7 88417 CEU:0.955;0.837, CHB:0.879;0.583, JPT:0.867;0.535 FUNCTIONAL_SNP rs9405090 chr6 32298372 Coding 7 79529 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs9268368 chr6 32333955 Coding 6 115112 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs4959091 chr6 32231014 Exon,non-coding 7 12171 CEU:0.955;0.837 FUNCTIONAL_SNP rs482194 chr6 32260559 Exon,non-coding 6 41716 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs2395114 chr6 32233547 Exon,non-coding 6 14704 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs1076711 chr6 32300374 Intron 3a 81531 CEU:0.955;0.837, CHB:1.0;0.645, JPT:0.931;0.587 FUNCTIONAL_SNP rs505274 chr6 32294992 Intron 3a 76149 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs926594 chr6 32305370 Intron 4 86527 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs9268082 chr6 32234953 Intergenic 4 16110 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs3130315 chr6 32220685 Intergenic 4 1842 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9267970 chr6 32217160 Intergenic 5a 1683 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6457510 chr6 32217046 Intergenic 5a 1797 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.957;0.915 FUNCTIONAL_SNP rs9267971 chr6 32217185 Intergenic 5a 1658 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3130311 chr6 32217367 Intergenic 5a 1476 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4713518 chr6 32257337 Intron 5b 38494 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs3115570 chr6 32222706 Intergenic 5b 3863 CEU:1.0;0.959, CHB:1.0;0.686, JPT:1.0;0.618, YRI:1.0;1.0 FUNCTIONAL_SNP rs454748 chr6 32213210 Intergenic 5b 5633 CEU:1.0;0.959, CHB:1.0;0.509, JPT:1.0;0.618, YRI:1.0;0.509 FUNCTIONAL_SNP rs9368711 chr6 32297156 Intron 5b 78313 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs476885 chr6 32294712 Intron 5b 75869 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs9267956 chr6 32213638 Intergenic 5b 5205 CEU:1.0;0.918, CHB:1.0;0.686, JPT:1.0;0.643 FUNCTIONAL_SNP rs1559876 chr6 32215769 Intergenic 5b 3074 CEU:1.0;0.878, CHB:1.0;0.686, JPT:1.0;0.638 FUNCTIONAL_SNP rs2515892 chr6 32215252 Intergenic 5b 3591 CEU:1.0;1.0, CHB:1.0;0.673, JPT:1.0;0.635, YRI:1.0;0.955 FUNCTIONAL_SNP rs2073046 chr6 32336074 Intron 5b 117231 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs2395110 chr6 32215876 Intergenic 5b 2967 CEU:1.0;1.0, CHB:1.0;0.686, JPT:1.0;0.649, YRI:1.0;1.0 FUNCTIONAL_SNP rs4576282 chr6 32312796 Intron 6 93953 CEU:0.953;0.831, CHB:1.0;0.686, JPT:0.928;0.575 FUNCTIONAL_SNP rs9267958 chr6 32214616 Intergenic 6 4227 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.919 FUNCTIONAL_SNP rs3115576 chr6 32216850 Intergenic 6 1993 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268283 chr6 32315173 Intron 6 96330 CEU:1.0;0.904, CHB:0.926;0.584, JPT:0.908;0.532 FUNCTIONAL_SNP rs9296022 chr6 32297955 Intron 6 79112 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs544358 chr6 32273158 Intron 6 54315 CEU:0.952;0.829, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs9268346 chr6 32331927 Intron 6 113084 CEU:0.954;0.833, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs2022534 chr6 32307137 Intron 6 88294 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs9368712 chr6 32297328 Intron 6 78485 CEU:0.952;0.829, CHB:1.0;0.673, JPT:0.926;0.589 FUNCTIONAL_SNP rs9268369 chr6 32334224 Intron 6 115381 CEU:0.954;0.833, CHB:1.0;0.686, JPT:0.929;0.579 FUNCTIONAL_SNP rs9296021 chr6 32297690 Intron 6 78847 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs531094 chr6 32286102 Intron 6 67259 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs1474728 chr6 32302067 Intron 6 83224 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs742582 chr6 32299715 Intron 6 80872 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs3115575 chr6 32216891 Intergenic 6 1952 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.951, YRI:0.952;0.794 FUNCTIONAL_SNP rs518374 chr6 32265710 Intron 6 46867 CEU:0.953;0.831, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs2143465 chr6 32309352 Intron 6 90509 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs533885 chr6 32293152 Intron 6 74309 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs574710 chr6 32288190 Intron 6 69347 CEU:0.955;0.837, CHB:0.879;0.583, JPT:0.867;0.535 FUNCTIONAL_SNP rs547077 chr6 32289318 Intron 6 70475 CEU:0.955;0.837, CHB:0.879;0.583, JPT:0.867;0.535 FUNCTIONAL_SNP rs9366793 chr6 32301289 Intron 6 82446 CEU:0.955;0.837, CHB:0.879;0.583, JPT:0.867;0.535 FUNCTIONAL_SNP rs9348880 chr6 32296780 Intron 6 77937 CEU:0.955;0.837, CHB:0.879;0.583, JPT:0.867;0.535 FUNCTIONAL_SNP rs9268357 chr6 32332996 Intron 6 114153 CEU:0.955;0.836, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs524578 chr6 32295357 Intron 6 76514 CEU:0.955;0.837, CHB:0.879;0.583, JPT:0.867;0.535 FUNCTIONAL_SNP rs525607 chr6 32292084 Intron 6 73241 CEU:0.955;0.837, CHB:0.879;0.583, JPT:0.867;0.535 FUNCTIONAL_SNP rs539703 chr6 32288462 Intron 6 69619 CEU:0.954;0.835, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs502626 chr6 32278266 Intron 6 59423 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs6929776 chr6 32303511 Intron 6 84668 CEU:0.955;0.837, CHB:0.88;0.61, JPT:0.867;0.535 FUNCTIONAL_SNP rs405875 chr6 32215188 Intergenic 6 3655 CEU:1.0;1.0, CHB:1.0;0.686, JPT:1.0;0.649, YRI:1.0;1.0 FUNCTIONAL_SNP rs4959092 chr6 32313011 Intron 6 94168 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs4959093 chr6 32313097 Intron 6 94254 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs2076538 chr6 32317471 Intron 6 98628 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs926591 chr6 32305690 Intron 6 86847 CEU:0.953;0.831, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs508805 chr6 32295350 Intron 6 76507 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs485774 chr6 32290954 Intron 6 72111 CEU:0.953;0.83, CHB:1.0;0.583, JPT:0.928;0.575 FUNCTIONAL_SNP rs2894240 chr6 32217846 Intergenic 6 997 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268132 chr6 32254654 Intergenic 6 35811 CEU:0.954;0.835, CHB:1.0;0.679, JPT:0.932;0.611 FUNCTIONAL_SNP rs3130310 chr6 32216911 Intergenic 6 1932 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6930681 chr6 32304031 Intron 6 85188 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs3817982 chr6 32306262 Intron 6 87419 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs9268256 chr6 32309864 Intron 7 91021 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs10807100 chr6 32303068 Intron 7 84225 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs9368713 chr6 32297337 Intron 7 78494 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs453275 chr6 32213810 Intergenic 7 5033 CEU:1.0;1.0, CHB:0.868;0.557, JPT:0.926;0.561 FUNCTIONAL_SNP rs537757 chr6 32268501 Intron 7 49658 CEU:0.953;0.831, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs6457508 chr6 32216963 Intergenic 7 1880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6457509 chr6 32217018 Intergenic 7 1825 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.915 FUNCTIONAL_SNP rs410283 chr6 32215198 Intergenic 7 3645 CEU:1.0;1.0, CHB:0.866;0.55, JPT:0.854;0.504, YRI:1.0;0.946 FUNCTIONAL_SNP rs1555117 chr6 32311148 Intron 7 92305 CEU:0.954;0.833, CHB:1.0;0.679, JPT:0.929;0.579 FUNCTIONAL_SNP rs563412 chr6 32215063 Intergenic 7 3780 CEU:1.0;1.0, CHB:1.0;0.686, JPT:1.0;0.649, YRI:1.0;1.0 FUNCTIONAL_SNP rs2143468 chr6 32309003 Intron 7 90160 CEU:0.954;0.833, CHB:1.0;0.679, JPT:0.929;0.579 FUNCTIONAL_SNP rs1033498 chr6 32307869 Intron 7 89026 CEU:0.955;0.836, CHB:1.0;0.679, JPT:0.931;0.587 FUNCTIONAL_SNP rs412492 chr6 32213831 Intergenic 7 5012 CEU:1.0;1.0, CHB:0.933;0.64, JPT:1.0;0.629, YRI:1.0;0.954 FUNCTIONAL_SNP rs440169 chr6 32213788 Intergenic 7 5055 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4959096 chr6 32314676 Intron 7 95833 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs2076541 chr6 32317215 Intron 7 98372 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs552339 chr6 32292715 Intron 7 73872 CEU:0.955;0.837, CHB:1.0;0.686, JPT:0.931;0.587 FUNCTIONAL_SNP rs2395111 chr6 32215964 Intergenic 7 2879 CEU:1.0;1.0, CHB:1.0;0.673, JPT:1.0;0.649, YRI:0.959;0.919 LEAD_SNP rs9296015 chr6 32218989 Intergenic 6 ASSOCIATION 21505073 Rheumatoid arthritis 37.6989700043 NOTCH4 - C6orf10 FUNCTIONAL_SNP rs9296016 chr6 32219010 Intergenic 6 21 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4959090 chr6 32219962 Intergenic 6 973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6921945 chr6 32220037 Intergenic 7 1048 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10223710 chr6 32218681 Intergenic 7 308 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3130320 chr6 32223258 Intergenic 2b ASSOCIATION 21408207 Systemic lupus erythematosus 5.52287874528 NOTCH4 - C6orf10 FUNCTIONAL_SNP rs8084 chr6 32411035 Coding 4 187777 CEU:0.917;0.808 FUNCTIONAL_SNP rs9268659 chr6 32410941 Intron 4 187683 CEU:0.919;0.812 FUNCTIONAL_SNP rs6936204 chr6 32217092 Intergenic 5a 6166 CEU:1.0;1.0, CHB:1.0;0.77, YRI:1.0;1.0 FUNCTIONAL_SNP rs9267972 chr6 32217232 Intergenic 5a 6026 CEU:0.953;0.908, CHB:0.905;0.693, JPT:1.0;0.792 FUNCTIONAL_SNP rs3115571 chr6 32220918 Intergenic 5b 2340 CEU:1.0;0.961, CHB:1.0;0.882, JPT:1.0;0.924, YRI:1.0;0.562 FUNCTIONAL_SNP rs3115572 chr6 32220484 Intergenic 5b 2774 CEU:1.0;0.961, CHB:1.0;0.882, JPT:1.0;0.924, YRI:1.0;0.562 FUNCTIONAL_SNP rs3096700 chr6 32221782 Intergenic 6 1476 CEU:1.0;0.961, CHB:1.0;0.882, JPT:1.0;0.924, YRI:1.0;0.555 FUNCTIONAL_SNP rs3130309 chr6 32215472 Intergenic 6 7786 CEU:1.0;0.961, CHB:0.932;0.814, JPT:1.0;0.924, YRI:1.0;0.53 FUNCTIONAL_SNP rs3130316 chr6 32221228 Intergenic 6 2030 CEU:1.0;0.961, CHB:1.0;0.882, JPT:1.0;0.924, YRI:1.0;0.562 LEAD_SNP rs3130340 chr6 32244627 Intergenic 7 ASSOCIATION 18445777 Bone mineral density (spine) 7.0 NOTCH4 - C6orf10 FUNCTIONAL_SNP rs3749966 chr6 32261507 Coding 7 16880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268055 chr6 32230608 Exon,non-coding 7 14019 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3130332 chr6 32231547 Exon,non-coding 5a 13080 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3096682 chr6 32235096 Intergenic 2b 9531 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6457516 chr6 32223830 Intron 2b 20797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268143 chr6 32256473 Intron 3a 11846 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6457515 chr6 32223785 Intron 4 20842 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3115553 chr6 32245827 Intergenic 5b 1200 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3096681 chr6 32235177 Intergenic 5b 9450 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3132945 chr6 32238680 Intergenic 6 5947 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3115552 chr6 32246156 Intergenic 6 1529 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7767325 chr6 32233886 Intergenic 6 10741 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7775592 chr6 32270283 Intron 6 25656 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs6909427 chr6 32268701 Intron 6 24074 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3132928 chr6 32234015 Intergenic 7 10612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3115560 chr6 32236142 Intergenic 7 8485 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3115563 chr6 32233638 Intergenic 7 10989 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1018430 chr6 32281688 Intron 7 37061 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1018431 chr6 32281676 Intron 7 37049 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3096673 chr6 32238013 Intergenic 7 6614 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7751896 chr6 32255410 Intergenic 7 10783 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6935269 chr6 32260350 Intron 7 15723 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6903871 chr6 32282019 Intron 7 37392 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268164 chr6 32271263 Intron 7 26636 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268201 chr6 32279284 Intron 7 34657 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6908927 chr6 32224489 Intron 7 20138 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6910071 chr6 32282854 Intron 6 ASSOCIATION 20453842 Rheumatoid arthritis 299.0 C6orf10 FUNCTIONAL_SNP rs2395175 chr6 32405026 Intergenic 5a 122172 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2073044 chr6 32338986 Intron 5a 56132 CEU:0.896;0.803, YRI:1.0;0.534 FUNCTIONAL_SNP rs9268301 chr6 32319637 Intron 6 36783 CEU:1.0;0.817, YRI:1.0;0.534 FUNCTIONAL_SNP rs9268362 chr6 32333341 Intron 6 50487 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268543 chr6 32384801 Intergenic 6 101947 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs9268145 chr6 32257284 Intron 6 25570 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3129900 chr6 32305979 Intron 6 ASSOCIATION 20639878 Lumiracoxib-related liver injury 24.15490196 C6orf10 LEAD_SNP rs2395148 chr6 32321554 Intron 6 ASSOCIATION 18576341 Arthritis (juvenile idiopathic) 9.69897000434 C6orf10 LEAD_SNP rs3129934 chr6 32336187 Intron 6 ASSOCIATION 18941528 Multiple sclerosis 10.0457574906 C6orf10 LEAD_SNP rs7758128 chr6 32345283 Intron 5b ASSOCIATION 21326295 Vitiligo 10.096910013 HNRNPA1P2 - BTNL2 FUNCTIONAL_SNP rs3763326 chr6 32413557 Intergenic 5a 68274 CEU:1.0;1.0, CHB:1.0;0.551, YRI:1.0;0.727 FUNCTIONAL_SNP rs7757831 chr6 32345183 Intron 5b 100 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1980493 chr6 32363215 Intron 7 ASSOCIATION 19287509 Anti-cyclic Citrullinated Peptide Antibody 6.30102999566 BTNL2 FUNCTIONAL_SNP rs3117097 chr6 32358689 Intron 6 4526 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9268480 chr6 32363844 Coding 6 ASSOCIATION 19915573 Ulcerative colitis 5.52287874528 BTNL2 FUNCTIONAL_SNP rs9268516 chr6 32379489 Exon,non-coding 6 15645 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268403 chr6 32341473 Intron 5a 22371 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268404 chr6 32341719 Intron 5a 22125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2076524 chr6 32370684 Intron 5a 6840 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268428 chr6 32344973 Intron 5b 18871 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268461 chr6 32351901 Intron 5b 11943 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268474 chr6 32357165 Intergenic 5b 6679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8180664 chr6 32347490 Intron 5b 16354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2395157 chr6 32348145 Intron 6 15699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3763307 chr6 32374622 Intron 6 10778 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3763316 chr6 32376746 Intron 6 12902 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268418 chr6 32343686 Intron 6 20158 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268454 chr6 32349711 Intron 6 14133 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268456 chr6 32349946 Intron 6 13898 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3793126 chr6 32371619 Intron 6 7775 CEU:1.0;0.911, CHB:1.0;0.915, JPT:1.0;0.846, YRI:1.0;0.863 FUNCTIONAL_SNP rs2076522 chr6 32371179 Intron 6 7335 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2076525 chr6 32370616 Intron 6 6772 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2894252 chr6 32345443 Intron 6 18401 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3817962 chr6 32368314 Intron 6 4470 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1980495 chr6 32346794 Intron 7 17050 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2294880 chr6 32367722 Intron 7 3878 CEU:1.0;0.953, CHB:1.0;0.843, JPT:1.0;0.846, YRI:1.0;0.924 LEAD_SNP rs2076529 chr6 32363955 Coding 7 ASSOCIATION 20935629 Waist-hip ratio 6.39794000867 BTNL2 FUNCTIONAL_SNP rs2076530 chr6 32363816 Coding 6 139 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;0.764, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268472 chr6 32355605 Intergenic 5b 8350 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268473 chr6 32355683 Intergenic 5b 8272 CEU:1.0;1.0, CHB:1.0;0.739, YRI:1.0;1.0 FUNCTIONAL_SNP rs3817973 chr6 32361111 Intron 5b 2844 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2395153 chr6 32345595 Intron 6 18360 CEU:1.0;0.96, YRI:1.0;0.542 FUNCTIONAL_SNP rs2294878 chr6 32367795 Intron 6 3840 CEU:1.0;0.887, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268402 chr6 32341353 Intron 6 22602 CEU:1.0;0.82, JPT:1.0;0.899, YRI:1.0;0.718 FUNCTIONAL_SNP rs9268460 chr6 32351283 Intron 6 12672 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2076533 chr6 32363527 Intron 6 428 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4424066 chr6 32354428 Intergenic 6 9527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10947262 chr6 32373312 Intron 7 ASSOCIATION 20305777 Knee osteoarthritis 8.30102999566 BTNL2 FUNCTIONAL_SNP rs28362680 chr6 32370816 Coding 4 2496 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10947261 chr6 32373232 Intron 6 80 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3806156 chr6 32373698 Intron 5b ASSOCIATION 20410501 Vitiligo 18.15490196 BTNL2 FUNCTIONAL_SNP rs9268480 chr6 32363844 Coding 6 9854 CEU:1.0;0.8 FUNCTIONAL_SNP rs2076523 chr6 32370835 Coding 2b 2863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268516 chr6 32379489 Exon,non-coding 6 5791 CEU:1.0;0.8 FUNCTIONAL_SNP rs9268491 chr6 32374131 Intron 5a 433 CEU:1.0;0.913, YRI:1.0;0.507 FUNCTIONAL_SNP rs9268403 chr6 32341473 Intron 5a 32225 CEU:1.0;0.8 FUNCTIONAL_SNP rs2076524 chr6 32370684 Intron 5a 3014 CEU:1.0;0.8 FUNCTIONAL_SNP rs8180664 chr6 32347490 Intron 5b 26208 CEU:1.0;0.8 FUNCTIONAL_SNP rs9268428 chr6 32344973 Intron 5b 28725 CEU:1.0;0.8 FUNCTIONAL_SNP rs3806157 chr6 32373801 Intron 5b 103 CEU:1.0;0.919, CHB:1.0;0.686, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268461 chr6 32351901 Intron 5b 21797 CEU:1.0;0.8 FUNCTIONAL_SNP rs9268474 chr6 32357165 Intergenic 5b 16533 CEU:1.0;0.8 FUNCTIONAL_SNP rs3763307 chr6 32374622 Intron 6 924 CEU:1.0;0.8 FUNCTIONAL_SNP rs9268494 chr6 32375352 Intron 6 1654 CEU:1.0;0.8 FUNCTIONAL_SNP rs9268477 chr6 32359121 Intron 6 14577 CEU:1.0;0.816 FUNCTIONAL_SNP rs2395157 chr6 32348145 Intron 6 25553 CEU:1.0;0.8 FUNCTIONAL_SNP rs9268456 chr6 32349946 Intron 6 23752 CEU:1.0;0.8 FUNCTIONAL_SNP rs3817963 chr6 32368087 Intron 6 5611 CEU:1.0;0.8 FUNCTIONAL_SNP rs9268493 chr6 32375330 Intron 6 1632 CEU:1.0;0.8 FUNCTIONAL_SNP rs9268499 chr6 32375695 Intron 6 1997 CEU:1.0;0.8 FUNCTIONAL_SNP rs2894252 chr6 32345443 Intron 6 28255 CEU:1.0;0.8 FUNCTIONAL_SNP rs9268454 chr6 32349711 Intron 6 23987 CEU:1.0;0.8 FUNCTIONAL_SNP rs9268418 chr6 32343686 Intron 6 30012 CEU:1.0;0.8 FUNCTIONAL_SNP rs3793126 chr6 32371619 Intron 6 2079 CEU:1.0;0.913, YRI:1.0;0.505 FUNCTIONAL_SNP rs2076525 chr6 32370616 Intron 6 3082 CEU:1.0;0.8 FUNCTIONAL_SNP rs3763311 chr6 32376176 Intron 6 2478 CEU:1.0;0.8 FUNCTIONAL_SNP rs3763316 chr6 32376746 Intron 6 3048 CEU:1.0;0.8 FUNCTIONAL_SNP rs3817962 chr6 32368314 Intron 6 5384 CEU:1.0;0.8 LEAD_SNP rs3763313 chr6 32376471 Intron 6 ASSOCIATION 20041166 HIV-1 control 5.69897000434 BTNL2 LEAD_SNP rs3135363 chr6 32389648 Intergenic 6 ASSOCIATION 21764829 Hepatitis B vaccine response 21.15490196 BTNL2 - HLA-DRA LEAD_SNP rs3135338 chr6 32401217 Intergenic 5a ASSOCIATION 20159113 Multiple sclerosis 24.6989700043 BTNL2 - HLA-DRA FUNCTIONAL_SNP rs2395178 chr6 32405362 Intergenic 2b 4145 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs984778 chr6 32400088 Intergenic 4 1129 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3135395 chr6 32405192 Intergenic 4 3975 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3129869 chr6 32405671 Intergenic 5a 4454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9271348 chr6 32583742 Intergenic 5a 182525 CEU:0.916;0.806 FUNCTIONAL_SNP rs3129866 chr6 32404065 Intergenic 5b 2848 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2395173 chr6 32404859 Intergenic 6 3642 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3129871 chr6 32406342 Intergenic 6 5125 CEU:1.0;0.96, CHB:1.0;0.77, JPT:1.0;0.86, YRI:1.0;0.719 FUNCTIONAL_SNP rs3129867 chr6 32404220 Intergenic 7 3003 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.859 FUNCTIONAL_SNP rs3135335 chr6 32401845 Intergenic 7 628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9268645 chr6 32408527 Intron 5a ASSOCIATION 19430480 Type 1 diabetes 100.0 HLA-DRA FUNCTIONAL_SNP rs9268605 chr6 32399833 Intergenic 2b 8694 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268606 chr6 32400070 Intergenic 4 8457 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4612206 chr6 32404093 Intergenic 5b 4434 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268589 chr6 32398202 Intergenic 5b 10325 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268634 chr6 32406530 Intergenic 5b 1997 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7773756 chr6 32402464 Intergenic 6 6063 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268607 chr6 32400538 Intergenic 6 7989 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7756262 chr6 32398675 Intergenic 6 9852 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268615 chr6 32402889 Intergenic 6 5638 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3129882 chr6 32409530 Intron 5a ASSOCIATION 20711177 Parkinson's disease 9.69897000434 HLA-DRA LEAD_SNP rs3135388 chr6 32413051 Intergenic 4 ASSOCIATION 19525953 Multiple sclerosis 224.397940009 HLA-DRA ASSOCIATION 17660530 Multiple sclerosis 80.0457574906 HLA-DRA LEAD_SNP rs2227139 chr6 32413459 Intergenic 5a ASSOCIATION 19820697 Hematological parameters 7.0 HLA-DRA - HLA-DRB9 FUNCTIONAL_SNP rs7192 chr6 32411646 Coding 5a 1813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7194 chr6 32412480 Coding 5a 979 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8084 chr6 32411035 Coding 4 2424 CEU:1.0;0.818, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7195 chr6 32412539 Exon,non-coding 5a 920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268832 chr6 32427789 Intergenic 4 14330 CEU:1.0;0.961, CHB:0.934;0.613 FUNCTIONAL_SNP rs2213585 chr6 32413150 Intergenic 4 309 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2213586 chr6 32413094 Intergenic 4 365 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268659 chr6 32410941 Intron 4 2518 CEU:1.0;0.821, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7754768 chr6 32420179 Intergenic 6 6720 CEU:1.0;0.961, CHB:1.0;0.703, JPT:1.0;0.647, YRI:1.0;0.692 FUNCTIONAL_SNP rs3763327 chr6 32413830 Intergenic 6 371 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7763262 chr6 32424882 Intergenic 6 11423 CEU:0.956;0.81 FUNCTIONAL_SNP rs6937545 chr6 32418031 Intergenic 6 4572 CEU:0.956;0.81 FUNCTIONAL_SNP rs6937696 chr6 32418018 Intergenic 7 4559 CEU:0.955;0.806 FUNCTIONAL_SNP rs9268766 chr6 32418710 Intergenic 7 5251 CEU:0.956;0.81 LEAD_SNP rs6903608 chr6 32428285 Intergenic 6 ASSOCIATION 21037568 Hodgkin's lymphoma 49.5228787453 HLA-DRB9 - HLA-DRB5 FUNCTIONAL_SNP rs3129952 chr6 32359763 Exon,non-coding 7 68522 CEU:0.953;0.831 FUNCTIONAL_SNP rs3129954 chr6 32365580 Intron 5b 62705 CEU:0.956;0.839 FUNCTIONAL_SNP rs3129951 chr6 32358286 Intergenic 5b 69999 CEU:0.947;0.812 FUNCTIONAL_SNP rs9269078 chr6 32440879 Intergenic 5b 12594 CEU:1.0;1.0, CHB:0.949;0.901, JPT:0.937;0.827, YRI:1.0;0.924 FUNCTIONAL_SNP rs9269081 chr6 32441100 Intergenic 5b 12815 CEU:1.0;0.958, CHB:0.948;0.898, JPT:0.935;0.822, YRI:0.959;0.85 FUNCTIONAL_SNP rs9269190 chr6 32448500 Intergenic 5b 20215 CEU:1.0;1.0, CHB:1.0;0.948, JPT:0.935;0.873, YRI:0.955;0.872 FUNCTIONAL_SNP rs9268914 chr6 32432556 Intergenic 6 4271 CEU:1.0;0.952, CHB:0.944;0.892, JPT:1.0;0.925, YRI:0.955;0.873 FUNCTIONAL_SNP rs3117108 chr6 32342822 Intron 6 85463 CEU:0.956;0.839 FUNCTIONAL_SNP rs3129948 chr6 32354644 Intergenic 6 73641 CEU:0.956;0.839 FUNCTIONAL_SNP rs3129955 chr6 32365840 Intron 6 62445 CEU:0.956;0.839 FUNCTIONAL_SNP rs7749242 chr6 32449030 Intergenic 6 20745 CEU:1.0;1.0, CHB:1.0;0.95, JPT:0.937;0.828, YRI:0.959;0.883 FUNCTIONAL_SNP rs12191360 chr6 32451361 Intergenic 6 23076 CEU:1.0;1.0, CHB:1.0;0.905, JPT:0.855;0.526, YRI:0.959;0.883 FUNCTIONAL_SNP rs2050188 chr6 32339897 Intron 6 88388 CEU:0.955;0.803 FUNCTIONAL_SNP rs9268880 chr6 32431358 Intergenic 6 3073 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.887, YRI:0.96;0.886 FUNCTIONAL_SNP rs9268882 chr6 32431623 Intergenic 6 3338 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs4999342 chr6 32448098 Intergenic 6 19813 CEU:1.0;0.956, CHB:1.0;0.9, JPT:1.0;0.883, YRI:0.959;0.85 FUNCTIONAL_SNP rs6919855 chr6 32429011 Intergenic 6 726 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.887, YRI:1.0;0.962 FUNCTIONAL_SNP rs9269070 chr6 32440451 Intergenic 6 12166 CEU:1.0;0.825, CHB:1.0;0.944, JPT:0.91;0.663 FUNCTIONAL_SNP rs9269202 chr6 32449523 Intergenic 6 21238 CEU:1.0;0.958, CHB:1.0;0.573, JPT:1.0;0.634, YRI:0.959;0.85 FUNCTIONAL_SNP rs6923504 chr6 32428186 Intergenic 7 99 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.883, YRI:1.0;1.0 LEAD_SNP rs9268853 chr6 32429643 Intergenic 6 ASSOCIATION 21653640 Rheumatoid arthritis 108.301029996 HLA-DRB9 - HLA-DRB5 ASSOCIATION 21297633 Ulcerative colitis 55.0 HLA-DRB9 - HLA-DRB5 FUNCTIONAL_SNP rs2516049 chr6 32570400 Intergenic 3a 140757 CEU:1.0;0.96 FUNCTIONAL_SNP rs9271568 chr6 32590463 Intergenic 4 160820 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.901, YRI:0.758;0.542 FUNCTIONAL_SNP rs9271574 chr6 32590590 Intergenic 4 160947 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:0.76;0.545 FUNCTIONAL_SNP rs9405112 chr6 32445600 Intergenic 5a 15957 CEU:1.0;1.0, CHB:1.0;0.855, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9271605 chr6 32591448 Intergenic 5a 161805 CEU:1.0;0.898, CHB:1.0;1.0, JPT:1.0;0.882 FUNCTIONAL_SNP rs9268833 chr6 32428062 Intergenic 5b 1581 CEU:1.0;0.808, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;0.691 FUNCTIONAL_SNP rs9405040 chr6 32439393 Intergenic 5b 9750 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2395185 chr6 32433167 Intergenic 6 3524 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs9405108 chr6 32438648 Intergenic 6 9005 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268858 chr6 32429758 Intergenic 6 115 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9368726 chr6 32438542 Intergenic 6 8899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268923 chr6 32432835 Intergenic 6 3192 CEU:1.0;0.91, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9271488 chr6 32589000 Intergenic 6 159357 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.903, YRI:0.76;0.545 FUNCTIONAL_SNP rs9268969 chr6 32434349 Intergenic 6 4706 CEU:1.0;0.851, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;0.922 FUNCTIONAL_SNP rs28366298 chr6 32560859 Intergenic 6 131216 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.775 FUNCTIONAL_SNP rs477515 chr6 32569691 Intergenic 6 140048 CEU:1.0;0.96 FUNCTIONAL_SNP rs9286790 chr6 32439828 Intergenic 6 10185 CEU:1.0;1.0, CHB:1.0;0.743, JPT:1.0;0.758, YRI:1.0;1.0 FUNCTIONAL_SNP rs522308 chr6 32581922 Intergenic 7 152279 CEU:1.0;0.958 FUNCTIONAL_SNP rs28772724 chr6 32509357 Intergenic 7 79714 CEU:1.0;1.0, CHB:1.0;0.789, JPT:1.0;0.901 FUNCTIONAL_SNP rs3129766 chr6 32594441 Intergenic 7 164798 CEU:1.0;0.96, CHB:1.0;0.867, JPT:1.0;0.903, YRI:0.757;0.512 LEAD_SNP rs9268877 chr6 32431147 Intergenic 6 ASSOCIATION 19915572 Ulcerative colitis 22.3979400087 HLA-DRB9 - HLA-DRB5 ASSOCIATION 18836448 Ulcerative colitis 17.2218487496 HLA-DRB9 - HLA-DRB5 FUNCTIONAL_SNP rs7755212 chr6 32441408 Intergenic 2b 10261 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.947, YRI:1.0;1.0 FUNCTIONAL_SNP rs7739357 chr6 32441641 Intergenic 3a 10494 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.941, YRI:1.0;0.961 FUNCTIONAL_SNP rs7739203 chr6 32441555 Intergenic 4 10408 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268852 chr6 32429594 Intergenic 6 1553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6927022 chr6 32612397 Intergenic 6 181250 CEU:0.958;0.815 FUNCTIONAL_SNP rs9269069 chr6 32440362 Intergenic 6 9215 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9269070 chr6 32440451 Intergenic 6 9304 CEU:1.0;0.954, CHB:1.0;0.891, JPT:1.0;1.0 FUNCTIONAL_SNP rs9269071 chr6 32440467 Intergenic 6 9320 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs9269080 chr6 32440969 Intergenic 6 9822 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.947, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268979 chr6 32435044 Intergenic 6 3897 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;0.961 FUNCTIONAL_SNP rs5026743 chr6 32439964 Intergenic 7 8817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9268905 chr6 32432077 Intergenic 7 ASSOCIATION 21602797 Cystic fibrosis severity 7.0 HLA-DRB9 - HLA-DRB5 LEAD_SNP rs9268923 chr6 32432835 Intergenic 6 ASSOCIATION 20228798 Ulcerative colitis 14.3979400087 HLA-DRB9 - HLA-DRB5 FUNCTIONAL_SNP rs2516049 chr6 32570400 Intergenic 3a 137565 CEU:0.952;0.864 FUNCTIONAL_SNP rs9271568 chr6 32590463 Intergenic 4 157628 CEU:1.0;0.909, CHB:0.949;0.901, JPT:1.0;0.896, YRI:0.736;0.508 FUNCTIONAL_SNP rs9271574 chr6 32590590 Intergenic 4 157755 CEU:1.0;0.91, CHB:1.0;0.952, JPT:1.0;0.895, YRI:0.738;0.512 FUNCTIONAL_SNP rs9405112 chr6 32445600 Intergenic 5a 12765 CEU:1.0;0.914, CHB:0.944;0.805, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9271605 chr6 32591448 Intergenic 5a 158613 CEU:1.0;0.841, CHB:1.0;0.945, JPT:1.0;0.877 FUNCTIONAL_SNP rs9405040 chr6 32439393 Intergenic 5b 6558 CEU:1.0;0.914, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2395185 chr6 32433167 Intergenic 6 332 CEU:1.0;0.909, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.883 FUNCTIONAL_SNP rs9405108 chr6 32438648 Intergenic 6 5813 CEU:1.0;0.91, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268853 chr6 32429643 Intergenic 6 3192 CEU:1.0;0.91, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9268858 chr6 32429758 Intergenic 6 3077 CEU:1.0;0.91, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9368726 chr6 32438542 Intergenic 6 5707 CEU:1.0;0.906, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9271488 chr6 32589000 Intergenic 6 156165 CEU:1.0;0.91, CHB:1.0;0.952, JPT:1.0;0.897, YRI:0.738;0.512 FUNCTIONAL_SNP rs9268969 chr6 32434349 Intergenic 6 1514 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs28366298 chr6 32560859 Intergenic 6 128024 CEU:1.0;0.91, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.755 FUNCTIONAL_SNP rs477515 chr6 32569691 Intergenic 6 136856 CEU:0.952;0.864 FUNCTIONAL_SNP rs9286790 chr6 32439828 Intergenic 6 6993 CEU:1.0;0.904, CHB:1.0;0.739, JPT:1.0;0.762, YRI:1.0;1.0 FUNCTIONAL_SNP rs522308 chr6 32581922 Intergenic 7 149087 CEU:0.953;0.868 FUNCTIONAL_SNP rs28772724 chr6 32509357 Intergenic 7 76522 CEU:1.0;0.906, CHB:0.943;0.733, JPT:1.0;0.896 FUNCTIONAL_SNP rs3129766 chr6 32594441 Intergenic 7 161606 CEU:0.954;0.87, CHB:0.948;0.816, JPT:1.0;0.904, YRI:0.752;0.504 LEAD_SNP rs2395185 chr6 32433167 Intergenic 6 ASSOCIATION 19915573 Ulcerative colitis 21.3010299957 HLA-DRB9 - HLA-DRB5 ASSOCIATION 19122664 Ulcerative colitis 16.0 HLA-DRB9 - HLA-DRB5 FUNCTIONAL_SNP rs9405112 chr6 32445600 Intergenic 5a 12433 CEU:1.0;1.0, CHB:1.0;0.855, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs9405040 chr6 32439393 Intergenic 5b 6226 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs9405108 chr6 32438648 Intergenic 6 5481 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs9268853 chr6 32429643 Intergenic 6 3524 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs9268858 chr6 32429758 Intergenic 6 3409 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs9368726 chr6 32438542 Intergenic 6 5375 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs9268923 chr6 32432835 Intergenic 6 332 CEU:1.0;0.909, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.883 LEAD_SNP rs477515 chr6 32569691 Intergenic 6 ASSOCIATION 18758464 Inflammatory bowel disease 8.0 HLA-DRB1 - HLA-DQA1 FUNCTIONAL_SNP rs2516049 chr6 32570400 Intergenic 3a 709 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs615672 chr6 32574171 Intergenic 6 ASSOCIATION 17554300 Rheumatoid arthritis 26.096910013 HLA-DRB1 - HLA-DQA1 FUNCTIONAL_SNP rs2858867 chr6 32575325 Intergenic 4 1154 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9271100 chr6 32576478 Intergenic 5a ASSOCIATION 19838193 Systemic lupus erythematosus 12.0 HLA-DRB1 - HLA-DQA1 FUNCTIONAL_SNP rs9271170 chr6 32577889 Intergenic 4 1411 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9269491 chr6 32542844 Intergenic 5a 33634 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9270467 chr6 32558946 Intergenic 6 17532 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9270856 chr6 32570839 Intergenic 6 5639 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9269329 chr6 32540041 Intergenic 6 36437 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs660895 chr6 32577380 Intergenic 4 ASSOCIATION 17804836 Rheumatoid arthritis 108.0 HLA-DRB1 - HLA-DQA1 LEAD_SNP rs674313 chr6 32578082 Intergenic 4 ASSOCIATION 21131588 Chronic lymphocytic leukemia 8.15490195999 HLA-DRB1 - HLA-DQA1 FUNCTIONAL_SNP rs707952 chr6 32609806 Coding 4 31724 CEU:1.0;0.837 FUNCTIONAL_SNP rs2854275 chr6 32628428 Exon,non-coding 6 50346 CEU:1.0;0.828 FUNCTIONAL_SNP rs9271562 chr6 32590411 Intergenic 2a 12329 CEU:1.0;0.889 FUNCTIONAL_SNP rs502055 chr6 32579003 Intergenic 2b 921 CEU:1.0;0.847, CHB:1.0;0.697, JPT:1.0;0.749, YRI:0.921;0.816 FUNCTIONAL_SNP rs2395225 chr6 32590624 Intergenic 4 12542 CEU:1.0;0.812 FUNCTIONAL_SNP rs9271613 chr6 32591666 Intergenic 4 13584 CEU:1.0;0.912 FUNCTIONAL_SNP rs2097432 chr6 32590771 Intergenic 4 12689 CEU:1.0;1.0, YRI:1.0;0.674 FUNCTIONAL_SNP rs9271612 chr6 32591654 Intergenic 4 13572 CEU:1.0;0.913 FUNCTIONAL_SNP rs3129716 chr6 32657436 Intergenic 4 79354 CEU:1.0;0.828 FUNCTIONAL_SNP rs2187668 chr6 32605884 Intron 4 27802 CEU:1.0;0.828 FUNCTIONAL_SNP rs3129763 chr6 32590925 Intergenic 4 12843 CEU:1.0;1.0, YRI:1.0;0.586 FUNCTIONAL_SNP rs502771 chr6 32578970 Intergenic 4 888 CEU:1.0;0.847, CHB:1.0;0.697, JPT:1.0;0.749, YRI:0.921;0.816 FUNCTIONAL_SNP rs9273327 chr6 32623223 Intergenic 4 45141 CEU:1.0;0.828 FUNCTIONAL_SNP rs2856674 chr6 32659645 Intergenic 5b 81563 CEU:1.0;0.828 FUNCTIONAL_SNP rs9275576 chr6 32679326 Intergenic 6 101244 CEU:1.0;0.828 FUNCTIONAL_SNP rs9270623 chr6 32565331 Intergenic 6 12751 CEU:1.0;1.0, YRI:1.0;0.921 FUNCTIONAL_SNP rs642093 chr6 32582075 Intergenic 7 3993 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs2040406 chr6 32603007 Intergenic 7 24925 CEU:1.0;0.827 FUNCTIONAL_SNP rs9272192 chr6 32601775 Intergenic 7 23693 CEU:1.0;0.918 FUNCTIONAL_SNP rs4599680 chr6 32566294 Intergenic 7 11788 CEU:0.912;0.831 FUNCTIONAL_SNP rs2647019 chr6 32663355 Intergenic 7 85273 CEU:1.0;0.828 LEAD_SNP rs9271366 chr6 32586854 Intergenic 6 ASSOCIATION 21699788 Inflammatory bowel disease 10.096910013 HLA-DRB1 - HLA-DQA1 ASSOCIATION 21699788 Inflammatory bowel disease 30.5228787453 HLA-DRB1 - HLA-DQA1 ASSOCIATION 21699788 Inflammatory bowel disease 69.6989700043 HLA-DRB1 - HLA-DQA1 ASSOCIATION 20694011 Immunoglobulin A 32.5228787453 HLA-DRB1 - HLA-DQA1 ASSOCIATION 20598377 Multiple sclerosis 16.3979400087 HLA-DRB1 - HLA-DQA1 ASSOCIATION 19525955 Multiple sclerosis 183.15490196 HLA-DRB1 - HLA-DQA1 FUNCTIONAL_SNP rs701831 chr6 32549395 Coding 5a 37459 CEU:1.0;0.951, CHB:1.0;0.758, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs3135391 chr6 32410987 Coding 4 175867 CEU:1.0;1.0 FUNCTIONAL_SNP rs7197 chr6 32412580 Exon,non-coding 4 174274 CEU:1.0;0.825 FUNCTIONAL_SNP rs9271055 chr6 32575369 Intergenic 3a 11485 CEU:1.0;0.951, CHB:1.0;0.758, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs2395182 chr6 32413317 Intergenic 4 173537 CEU:1.0;0.825 FUNCTIONAL_SNP rs3135388 chr6 32413051 Intergenic 4 173803 CEU:1.0;1.0 FUNCTIONAL_SNP rs3129888 chr6 32411726 Intron 5a 175128 CEU:1.0;0.825 FUNCTIONAL_SNP rs3129889 chr6 32413545 Intergenic 5a 173309 CEU:1.0;1.0 FUNCTIONAL_SNP rs3129768 chr6 32595083 Intergenic 5a 8229 CEU:1.0;0.823, JPT:1.0;0.719 FUNCTIONAL_SNP rs3129860 chr6 32401079 Intergenic 6 185775 CEU:1.0;1.0 FUNCTIONAL_SNP rs3129868 chr6 32404377 Intergenic 6 182477 CEU:1.0;1.0 FUNCTIONAL_SNP rs3135005 chr6 32586019 Intergenic 6 835 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9270986 chr6 32574060 Intergenic 6 12794 CEU:1.0;0.951, CHB:1.0;0.758, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs9270984 chr6 32573991 Intergenic 6 12863 CEU:1.0;0.951, CHB:1.0;0.758, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs35464393 chr6 32530198 Intergenic 6 56656 CEU:0.939;0.832, CHB:1.0;0.758, JPT:1.0;0.733, YRI:0.889;0.791 FUNCTIONAL_SNP rs3135350 chr6 32392981 Intergenic 6 193873 CEU:1.0;1.0 FUNCTIONAL_SNP rs3135352 chr6 32392906 Intergenic 6 193948 CEU:1.0;1.0 FUNCTIONAL_SNP rs28490179 chr6 32519005 Intergenic 6 67849 CEU:1.0;0.864, CHB:1.0;0.603, JPT:1.0;0.861, YRI:1.0;0.816 FUNCTIONAL_SNP rs9271775 chr6 32594328 Intergenic 6 7474 CEU:1.0;0.864, JPT:1.0;0.723 FUNCTIONAL_SNP rs2239802 chr6 32411846 Intron 7 175008 CEU:1.0;0.825 LEAD_SNP rs28421666 chr6 32592737 Intergenic 5b ASSOCIATION 20512145 Nasopharyngeal carcinoma 17.6989700043 HLA-DRB1 - HLA-DQA1 LEAD_SNP rs9272105 chr6 32599999 Intergenic 6 ASSOCIATION 21502966 Response to interferon beta therapy 9.39794000867 HLA-DRB1 - HLA-DQA1 FUNCTIONAL_SNP rs9271720 chr6 32593507 Intergenic 6 6492 CEU:1.0;0.875, CHB:1.0;0.648, JPT:1.0;0.738, YRI:1.0;0.598 FUNCTIONAL_SNP rs9272143 chr6 32600803 Intergenic 6 804 CEU:1.0;0.875, CHB:1.0;0.648, JPT:1.0;0.738, YRI:1.0;0.598 LEAD_SNP rs9272219 chr6 32602269 Intergenic 6 ASSOCIATION 21653640 Rheumatoid arthritis 45.0 HLA-DRB1 - HLA-DQA1 ASSOCIATION 19571809 Schizophrenia 7.15490195999 HLA-DRB1 - HLA-DQA1 FUNCTIONAL_SNP rs9273012 chr6 32611641 Intergenic 5a 9372 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9272535 chr6 32606756 Intron 5a 4487 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9273109 chr6 32612627 Intergenic 6 10358 CEU:0.925;0.856, CHB:1.0;0.753, JPT:1.0;0.904, YRI:1.0;0.785 FUNCTIONAL_SNP rs9272192 chr6 32601775 Intergenic 7 494 CEU:1.0;0.854, CHB:1.0;0.707, JPT:1.0;0.575, YRI:1.0;0.642 LEAD_SNP rs2040406 chr6 32603007 Intergenic 7 ASSOCIATION 20453840 Multiple sclerosis 20.0 HLA-DRB1 - HLA-DQA1 LEAD_SNP rs9272346 chr6 32604372 Intergenic 6 ASSOCIATION 18978792 Type 1 diabetes 128.22184875 HLA-DQA1 ASSOCIATION 17554300 Type 1 diabetes 133.301029996 HLA-DQA1 FUNCTIONAL_SNP rs1063355 chr6 32627714 Exon,non-coding 4 23342 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9273349 chr6 32625869 Intergenic 5a 21497 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17843593 chr6 32615950 Intergenic 6 11578 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17843608 chr6 32620454 Intergenic 6 16082 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2187668 chr6 32605884 Intron 4 ASSOCIATION 21408207 Systemic lupus erythematosus 27.2218487496 HLA-DQA1 ASSOCIATION 21323541 Nephropathy (idiopathic membranous) 92.096910013 HLA-DQA1 ASSOCIATION 20694011 Immunoglobulin A 32.6989700043 HLA-DQA1 ASSOCIATION 20190752 Celiac disease 50.0 HLA-DQA1 ASSOCIATION 18204098 Systemic lupus erythematosus 20.5228787453 HLA-DQA1 ASSOCIATION 17558408 Celiac disease 19.0 HLA-DQA1 FUNCTIONAL_SNP rs2854275 chr6 32628428 Exon,non-coding 6 22544 CEU:1.0;1.0, CHB:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs674313 chr6 32578082 Intergenic 4 27802 CEU:1.0;0.828 FUNCTIONAL_SNP rs2097432 chr6 32590771 Intergenic 4 15113 CEU:1.0;0.827 FUNCTIONAL_SNP rs3129763 chr6 32590925 Intergenic 4 14959 CEU:1.0;0.828 FUNCTIONAL_SNP rs9273327 chr6 32623223 Intergenic 4 17339 CEU:1.0;1.0, CHB:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs3129716 chr6 32657436 Intergenic 4 51552 CEU:1.0;1.0, CHB:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs3135394 chr6 32408497 Intron 5a 197387 CEU:1.0;0.878 FUNCTIONAL_SNP rs2856674 chr6 32659645 Intergenic 5b 53761 CEU:1.0;1.0, CHB:0.819;0.671, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275576 chr6 32679326 Intergenic 6 73442 CEU:1.0;1.0, CHB:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs9270623 chr6 32565331 Intergenic 6 40553 CEU:1.0;0.828 FUNCTIONAL_SNP rs2647044 chr6 32667910 Intergenic 7 62026 CEU:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs642093 chr6 32582075 Intergenic 7 23809 CEU:1.0;0.827 FUNCTIONAL_SNP rs2040406 chr6 32603007 Intergenic 7 2877 CEU:1.0;1.0 FUNCTIONAL_SNP rs1794520 chr6 32662338 Intergenic 7 56454 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1794282 chr6 32666526 Intergenic 7 60642 CEU:1.0;0.899 FUNCTIONAL_SNP rs2647019 chr6 32663355 Intergenic 7 57471 CEU:1.0;1.0, CHB:1.0;0.823, YRI:1.0;0.866 LEAD_SNP rs9272535 chr6 32606756 Intron 5a ASSOCIATION 21131588 Chronic lymphocytic leukemia 7.04575749056 HLA-DQA1 FUNCTIONAL_SNP rs707952 chr6 32609806 Coding 4 3050 CEU:1.0;0.854, YRI:1.0;0.61 FUNCTIONAL_SNP rs9273012 chr6 32611641 Intergenic 5a 4885 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9272219 chr6 32602269 Intergenic 6 4487 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9273109 chr6 32612627 Intergenic 6 5871 CEU:0.921;0.848, CHB:1.0;0.753, JPT:1.0;0.896, YRI:1.0;0.805 FUNCTIONAL_SNP rs9272192 chr6 32601775 Intergenic 7 4981 CEU:1.0;0.854, CHB:1.0;0.707, JPT:1.0;0.544, YRI:1.0;0.647 LEAD_SNP rs9273349 chr6 32625869 Intergenic 5a ASSOCIATION 20860503 Asthma 13.15490196 HLA-DQA1 - HLA-DQB1 FUNCTIONAL_SNP rs1063355 chr6 32627714 Exon,non-coding 4 1845 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9272346 chr6 32604372 Intergenic 6 21497 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17843593 chr6 32615950 Intergenic 6 9919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17843608 chr6 32620454 Intergenic 6 5415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9274407 chr6 32632832 Coding 4 ASSOCIATION 21570397 Drug-induced liver injury (amoxicillin-clavulanate) 13.3010299957 HLA-DQB1 LEAD_SNP rs7774434 chr6 32657578 Intergenic 4 ASSOCIATION 21399635 Primary biliary cirrhosis 33.3979400087 HLA-DQB1 - HLA-DQA2 ASSOCIATION 20639880 Primary biliary cirrhosis 25.5228787453 HLA-DQB1 - HLA-DQA2 LEAD_SNP rs9469220 chr6 32658310 Intergenic 4 ASSOCIATION 17554300 Crohn's disease 5.69897000434 HLA-DQB1 - HLA-DQA2 LEAD_SNP rs6457617 chr6 32663851 Intergenic 6 ASSOCIATION 21750679 Systemic sclerosis 36.6989700043 HLA-DQB1 - HLA-DQA2 ASSOCIATION 20383147 Systemic sclerosis 16.3979400087 HLA-DQB1 - HLA-DQA2 ASSOCIATION 18668548 Rheumatoid arthritis 9.0 HLA-DQB1 - HLA-DQA2 ASSOCIATION 17554300 Rheumatoid arthritis 74.3010299957 HLA-DQB1 - HLA-DQA2 FUNCTIONAL_SNP rs9275224 chr6 32659878 Intergenic 3a 3973 CEU:1.0;1.0, CHB:0.939;0.631, JPT:1.0;0.952, YRI:1.0;0.775 FUNCTIONAL_SNP rs4713581 chr6 32660023 Intergenic 4 3828 CEU:1.0;0.961, CHB:1.0;0.828, JPT:1.0;1.0 FUNCTIONAL_SNP rs4713582 chr6 32660051 Intergenic 4 3800 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs4713583 chr6 32660153 Intergenic 5a 3698 CEU:1.0;1.0, CHB:1.0;0.773, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs4248168 chr6 32659743 Intergenic 5b 4108 CEU:1.0;1.0, CHB:1.0;0.828, JPT:1.0;1.0 FUNCTIONAL_SNP rs2395522 chr6 32664722 Intergenic 6 871 CEU:1.0;1.0, CHB:1.0;0.704, JPT:1.0;0.943, YRI:1.0;0.732 FUNCTIONAL_SNP rs9275245 chr6 32660943 Intergenic 6 2908 CEU:1.0;1.0, CHB:1.0;0.681, JPT:1.0;0.952, YRI:1.0;0.775 FUNCTIONAL_SNP rs6457620 chr6 32663999 Intergenic 6 148 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275292 chr6 32663289 Intergenic 6 562 CEU:1.0;1.0, CHB:1.0;0.723, JPT:1.0;0.949, YRI:1.0;0.767 FUNCTIONAL_SNP rs9275295 chr6 32663391 Intergenic 6 460 CEU:1.0;1.0, CHB:1.0;0.708, JPT:1.0;0.947 FUNCTIONAL_SNP rs5002702 chr6 32659158 Intergenic 6 4693 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6457620 chr6 32663999 Intergenic 6 ASSOCIATION 18794853 Rheumatoid arthritis 185.397940009 HLA-DQB1 - HLA-DQA2 FUNCTIONAL_SNP rs4713582 chr6 32660051 Intergenic 4 3948 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs6457617 chr6 32663851 Intergenic 6 148 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5002702 chr6 32659158 Intergenic 6 4841 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2647012 chr6 32664458 Intergenic 6 ASSOCIATION 21533074 Follicular lymphoma 20.6989700043 HLA-DQB1 - HLA-DQA2 ASSOCIATION 21408207 Systemic lupus erythematosus 5.09691001301 HLA-DQB1 - HLA-DQA2 FUNCTIONAL_SNP rs2647046 chr6 32668336 Intergenic 2b 3878 CEU:1.0;1.0, CHB:0.922;0.85, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs2858310 chr6 32668323 Intergenic 4 3865 CEU:1.0;1.0, CHB:0.922;0.85, JPT:1.0;1.0, YRI:1.0;0.921 FUNCTIONAL_SNP rs2647003 chr6 32664880 Intergenic 5a 422 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2647040 chr6 32667280 Intergenic 6 2822 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs6932517 chr6 32678182 Intergenic 6 13724 CEU:1.0;0.921, JPT:1.0;0.534, YRI:0.95;0.591 FUNCTIONAL_SNP rs9275516 chr6 32674643 Intergenic 6 10185 CEU:0.951;0.863, YRI:1.0;0.635 FUNCTIONAL_SNP rs9275521 chr6 32674952 Intergenic 6 10494 CEU:1.0;1.0, CHB:0.922;0.85, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs9275524 chr6 32675109 Intergenic 6 10651 CEU:1.0;0.888, JPT:1.0;0.534, YRI:0.95;0.591 FUNCTIONAL_SNP rs9275572 chr6 32678999 Intergenic 6 14541 CEU:1.0;0.888, JPT:1.0;0.534, YRI:0.95;0.591 FUNCTIONAL_SNP rs9275596 chr6 32681631 Intergenic 6 17173 CEU:1.0;0.924, CHB:1.0;0.64, JPT:1.0;0.753, YRI:1.0;0.883 FUNCTIONAL_SNP rs2856717 chr6 32670308 Intergenic 6 5850 CEU:1.0;1.0, CHB:0.922;0.85, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs2856725 chr6 32666738 Intergenic 6 2280 CEU:1.0;0.924, CHB:0.918;0.842, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2858324 chr6 32660375 Intergenic 6 4083 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2858305 chr6 32670464 Intergenic 6 6006 CEU:1.0;1.0, CHB:0.922;0.85, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs1612904 chr6 32669018 Intergenic 6 4560 CEU:1.0;0.924, CHB:1.0;0.64, JPT:1.0;0.753, YRI:1.0;0.846 FUNCTIONAL_SNP rs3998157 chr6 32678477 Intergenic 6 14019 CEU:1.0;0.872 FUNCTIONAL_SNP rs9380318 chr6 32677669 Intergenic 6 13211 CEU:1.0;0.886, JPT:1.0;0.511, YRI:0.951;0.611 FUNCTIONAL_SNP rs4273729 chr6 32678597 Intergenic 7 14139 CEU:1.0;0.888, JPT:1.0;0.534, YRI:0.95;0.591 FUNCTIONAL_SNP rs9275517 chr6 32674649 Intergenic 7 10191 CEU:1.0;0.882, JPT:1.0;0.559, YRI:0.951;0.611 FUNCTIONAL_SNP rs9275565 chr6 32677938 Intergenic 7 13480 CEU:1.0;0.888, JPT:1.0;0.534, YRI:0.95;0.591 FUNCTIONAL_SNP rs9275573 chr6 32679146 Intergenic 7 14688 CEU:1.0;0.888, JPT:1.0;0.534, YRI:0.95;0.591 FUNCTIONAL_SNP rs2858317 chr6 32662280 Intergenic 7 2178 CEU:1.0;0.815, CHB:1.0;0.808, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10484561 chr6 32665420 Intergenic 6 ASSOCIATION 20639881 Follicular lymphoma 29.0 HLA-DQB1 - HLA-DQA2 FUNCTIONAL_SNP rs9275436 chr6 32671399 Intergenic 2b 5979 CEU:1.0;0.847 FUNCTIONAL_SNP rs17499411 chr6 32665002 Intergenic 3b 418 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17533167 chr6 32590844 Intergenic 4 74576 CEU:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs3830135 chr6 32548464 Intron 4 116956 CEU:1.0;0.866, JPT:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs28656080 chr6 32525688 Intron 5b 139732 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs17212469 chr6 32665153 Intergenic 6 267 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.879 FUNCTIONAL_SNP rs34693699 chr6 32535894 Intergenic 6 129526 CEU:1.0;0.865, JPT:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs17427564 chr6 32667067 Intergenic 6 1647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4530903 chr6 32581889 Intergenic 6 83531 CEU:1.0;0.866, JPT:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs35998847 chr6 32666997 Intergenic 6 1577 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10947332 chr6 32677440 Intergenic 6 12020 CEU:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs17500482 chr6 32711179 Intron 6 45759 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7755224 chr6 32652317 Intergenic 6 13103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;1.0 FUNCTIONAL_SNP rs28605404 chr6 32569687 Intergenic 6 95733 CEU:1.0;0.866, JPT:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs17427431 chr6 32663644 Intergenic 6 1776 CEU:1.0;1.0, JPT:1.0;0.821, YRI:1.0;0.604 FUNCTIONAL_SNP rs28495356 chr6 32512164 Intergenic 6 153256 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;0.65 FUNCTIONAL_SNP rs9275432 chr6 32671185 Intergenic 7 5765 CEU:1.0;0.823 FUNCTIONAL_SNP rs35571839 chr6 32512613 Intergenic 7 152807 CEU:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs6457614 chr6 32651900 Intergenic 7 13520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs28530648 chr6 32527079 Intron 7 138341 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs28760027 chr6 32509985 Intergenic 7 155435 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs17427445 chr6 32663764 Intergenic 7 1656 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2647044 chr6 32667910 Intergenic 7 ASSOCIATION 17632545 Type 1 diabetes 16.0 HLA-DQB1 - HLA-DQA2 LEAD_SNP rs2856718 chr6 32670255 Intergenic 6 ASSOCIATION 21750111 Hepatitis B 36.3979400087 HLA-DQB1 - HLA-DQA2 FUNCTIONAL_SNP rs2647050 chr6 32669767 Intergenic 6 488 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2856726 chr6 32666721 Intergenic 6 3534 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.961;0.924 FUNCTIONAL_SNP rs2856664 chr6 32665616 Intergenic 6 4639 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.961;0.924 LEAD_SNP rs13192471 chr6 32671103 Intergenic 7 ASSOCIATION 20453841 Rheumatoid arthritis 57.6989700043 HLA-DQB1 - HLA-DQA2 FUNCTIONAL_SNP rs35120848 chr6 32670495 Intergenic 7 608 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9275572 chr6 32678999 Intergenic 6 ASSOCIATION 21499248 Hepatocellular carcinoma 8.22184874962 HLA-DQB1 - HLA-DQA2 ASSOCIATION 20596022 Alopecia areata 35.0 HLA-DQB1 - HLA-DQA2 FUNCTIONAL_SNP rs2647046 chr6 32668336 Intergenic 2b 10663 CEU:1.0;0.888, CHB:1.0;0.558, JPT:1.0;0.534, YRI:1.0;0.628 FUNCTIONAL_SNP rs9271588 chr6 32590953 Intergenic 2b 88046 CEU:0.918;0.811 FUNCTIONAL_SNP rs2858310 chr6 32668323 Intergenic 4 10676 CEU:1.0;0.888, CHB:1.0;0.558, JPT:1.0;0.551, YRI:1.0;0.603 FUNCTIONAL_SNP rs2647003 chr6 32664880 Intergenic 5a 14119 CEU:1.0;0.888, CHB:1.0;0.515, JPT:1.0;0.534, YRI:0.95;0.591 FUNCTIONAL_SNP rs2647040 chr6 32667280 Intergenic 6 11719 CEU:1.0;0.888, CHB:1.0;0.513, JPT:1.0;0.519, YRI:1.0;0.619 FUNCTIONAL_SNP rs6932517 chr6 32678182 Intergenic 6 817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1612904 chr6 32669018 Intergenic 6 9981 CEU:1.0;0.821, YRI:1.0;0.554 FUNCTIONAL_SNP rs9275516 chr6 32674643 Intergenic 6 4356 CEU:1.0;0.955, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275521 chr6 32674952 Intergenic 6 4047 CEU:1.0;0.888, CHB:1.0;0.558, JPT:1.0;0.534, YRI:1.0;0.628 FUNCTIONAL_SNP rs9275524 chr6 32675109 Intergenic 6 3890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275596 chr6 32681631 Intergenic 6 2632 CEU:1.0;0.821, YRI:1.0;0.578 FUNCTIONAL_SNP rs2856717 chr6 32670308 Intergenic 6 8691 CEU:1.0;0.888, CHB:1.0;0.558, JPT:1.0;0.534, YRI:1.0;0.628 FUNCTIONAL_SNP rs2856725 chr6 32666738 Intergenic 6 12261 CEU:1.0;0.821, JPT:1.0;0.523, YRI:0.949;0.585 FUNCTIONAL_SNP rs2858324 chr6 32660375 Intergenic 6 18624 CEU:1.0;0.887, CHB:1.0;0.515, JPT:1.0;0.534, YRI:0.95;0.591 FUNCTIONAL_SNP rs2858305 chr6 32670464 Intergenic 6 8535 CEU:1.0;0.888, CHB:1.0;0.558, JPT:1.0;0.534, YRI:1.0;0.628 FUNCTIONAL_SNP rs3998157 chr6 32678477 Intergenic 6 522 CEU:1.0;1.0 FUNCTIONAL_SNP rs9380318 chr6 32677669 Intergenic 6 1330 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2647012 chr6 32664458 Intergenic 6 14541 CEU:1.0;0.888, JPT:1.0;0.534, YRI:0.95;0.591 FUNCTIONAL_SNP rs4273729 chr6 32678597 Intergenic 7 402 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275517 chr6 32674649 Intergenic 7 4350 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275565 chr6 32677938 Intergenic 7 1061 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275573 chr6 32679146 Intergenic 7 147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7765379 chr6 32680928 Intergenic 7 ASSOCIATION 21452313 Rheumatoid arthritis 22.3010299957 HLA-DQB1 - HLA-DQA2 ASSOCIATION 21452313 Rheumatoid arthritis 22.3010299957 HLA-DQB1 - HLA-DQA2 FUNCTIONAL_SNP rs7764819 chr6 32680576 Intergenic 7 352 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9275596 chr6 32681631 Intergenic 6 ASSOCIATION 21399633 Nephropathy 25.6989700043 HLA-DQB1 - HLA-DQA2 FUNCTIONAL_SNP rs2647046 chr6 32668336 Intergenic 2b 13295 CEU:1.0;0.924, CHB:1.0;0.642, JPT:1.0;0.753, YRI:1.0;0.92 FUNCTIONAL_SNP rs9271586 chr6 32590899 Intergenic 4 90732 CEU:1.0;0.814 FUNCTIONAL_SNP rs2858310 chr6 32668323 Intergenic 4 13308 CEU:1.0;0.924, CHB:1.0;0.642, JPT:1.0;0.742, YRI:0.957;0.877 FUNCTIONAL_SNP rs2647003 chr6 32664880 Intergenic 5a 16751 CEU:1.0;0.924, CHB:1.0;0.694, JPT:1.0;0.753, YRI:1.0;0.883 FUNCTIONAL_SNP rs2647040 chr6 32667280 Intergenic 6 14351 CEU:1.0;0.924, CHB:1.0;0.693, JPT:1.0;0.741, YRI:1.0;0.916 FUNCTIONAL_SNP rs9275521 chr6 32674952 Intergenic 6 6679 CEU:1.0;0.924, CHB:1.0;0.642, JPT:1.0;0.753, YRI:1.0;0.92 FUNCTIONAL_SNP rs9275524 chr6 32675109 Intergenic 6 6522 CEU:1.0;0.821, YRI:1.0;0.578 FUNCTIONAL_SNP rs2856717 chr6 32670308 Intergenic 6 11323 CEU:1.0;0.924, CHB:1.0;0.642, JPT:1.0;0.753, YRI:1.0;0.92 FUNCTIONAL_SNP rs2856725 chr6 32666738 Intergenic 6 14893 CEU:0.919;0.845, CHB:1.0;0.693, JPT:1.0;0.742, YRI:1.0;0.88 FUNCTIONAL_SNP rs6932517 chr6 32678182 Intergenic 6 3449 CEU:1.0;0.848, YRI:1.0;0.578 FUNCTIONAL_SNP rs9275572 chr6 32678999 Intergenic 6 2632 CEU:1.0;0.821, YRI:1.0;0.578 FUNCTIONAL_SNP rs2858305 chr6 32670464 Intergenic 6 11167 CEU:1.0;0.924, CHB:1.0;0.642, JPT:1.0;0.753, YRI:1.0;0.92 FUNCTIONAL_SNP rs2858324 chr6 32660375 Intergenic 6 21256 CEU:1.0;0.922, CHB:1.0;0.694, JPT:1.0;0.753, YRI:1.0;0.883 FUNCTIONAL_SNP rs9380318 chr6 32677669 Intergenic 6 3962 CEU:1.0;0.817, YRI:1.0;0.596 FUNCTIONAL_SNP rs2647012 chr6 32664458 Intergenic 6 17173 CEU:1.0;0.924, CHB:1.0;0.64, JPT:1.0;0.753, YRI:1.0;0.883 FUNCTIONAL_SNP rs1612904 chr6 32669018 Intergenic 6 12613 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs9275516 chr6 32674643 Intergenic 6 6988 CEU:0.949;0.82, YRI:1.0;0.576 FUNCTIONAL_SNP rs4273729 chr6 32678597 Intergenic 7 3034 CEU:1.0;0.821, YRI:1.0;0.578 FUNCTIONAL_SNP rs9275565 chr6 32677938 Intergenic 7 3693 CEU:1.0;0.821, YRI:1.0;0.578 FUNCTIONAL_SNP rs9275573 chr6 32679146 Intergenic 7 2485 CEU:1.0;0.821, YRI:1.0;0.578 FUNCTIONAL_SNP rs2858317 chr6 32662280 Intergenic 7 19351 CEU:0.943;0.802, CHB:0.869;0.67, JPT:1.0;0.633, YRI:1.0;0.882 FUNCTIONAL_SNP rs9275517 chr6 32674649 Intergenic 7 6982 CEU:1.0;0.81, YRI:1.0;0.596 LEAD_SNP rs2858884 chr6 32700083 Intergenic 7 ASSOCIATION 20711174 Narcolepsy 7.52287874528 HLA-DQB1 - HLA-DQA2 FUNCTIONAL_SNP rs9275652 chr6 32685822 Exon,non-coding 7 14261 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275660 chr6 32686196 Exon,non-coding 6 13887 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276401 chr6 32709204 Exon,non-coding 4 9121 CEU:1.0;0.93, YRI:1.0;0.955 FUNCTIONAL_SNP rs7758736 chr6 32758394 Intergenic 4 58311 CEU:1.0;0.868 FUNCTIONAL_SNP rs9276348 chr6 32706209 Intergenic 5a 6126 CEU:1.0;0.937 FUNCTIONAL_SNP rs9275936 chr6 32692933 Intergenic 5b 7150 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275686 chr6 32687570 Intergenic 5b 12513 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276190 chr6 32699350 Intergenic 5b 733 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276435 chr6 32713867 Intron 5b 13784 CEU:1.0;1.0 FUNCTIONAL_SNP rs9276456 chr6 32715943 Intergenic 6 15860 CEU:1.0;1.0 FUNCTIONAL_SNP rs2859076 chr6 32702586 Intergenic 6 2503 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276601 chr6 32734304 Intergenic 6 34221 CEU:1.0;0.933 FUNCTIONAL_SNP rs2859090 chr6 32700833 Intergenic 6 750 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275738 chr6 32688839 Intergenic 6 11244 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275741 chr6 32688872 Intergenic 6 11211 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276132 chr6 32697755 Intergenic 6 2328 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276555 chr6 32722754 Intergenic 6 22671 CEU:1.0;1.0, YRI:1.0;0.63 FUNCTIONAL_SNP rs5021448 chr6 32707706 Intergenic 7 7623 CEU:1.0;1.0 FUNCTIONAL_SNP rs9276425 chr6 32711050 Intron 7 10967 CEU:1.0;1.0, YRI:1.0;0.645 FUNCTIONAL_SNP rs763026 chr6 32691745 Intergenic 7 8338 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276313 chr6 32704706 Intergenic 7 4623 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276550 chr6 32722243 Intergenic 7 22160 CEU:1.0;1.0 FUNCTIONAL_SNP rs9276171 chr6 32698918 Intergenic 7 1165 CEU:1.0;1.0 FUNCTIONAL_SNP rs9275690 chr6 32687720 Intergenic 7 12363 CEU:1.0;1.0 FUNCTIONAL_SNP rs9276351 chr6 32706416 Intergenic 7 6333 CEU:1.0;1.0 FUNCTIONAL_SNP rs9275970 chr6 32693615 Intergenic 7 6468 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9275659 chr6 32686103 Intron 7 13980 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276357 chr6 32706559 Intergenic 7 6476 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2859078 chr6 32702449 Intergenic 7 2366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2859079 chr6 32702381 Intergenic 7 2298 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.796, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276172 chr6 32698947 Intergenic 7 1136 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276375 chr6 32707585 Intergenic 7 7502 CEU:1.0;0.93, YRI:1.0;0.957 FUNCTIONAL_SNP rs9276149 chr6 32698156 Intergenic 7 1927 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276556 chr6 32723233 Intergenic 7 23150 CEU:1.0;1.0, YRI:1.0;0.645 LEAD_SNP rs2301271 chr6 32725193 Intron 6 ASSOCIATION 21408207 Systemic lupus erythematosus 11.6989700043 HLA-DQB2 FUNCTIONAL_SNP rs1049110 chr6 32726803 Coding 5b 1610 CEU:1.0;0.961 FUNCTIONAL_SNP rs3213484 chr6 32725062 Coding 7 131 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;0.962 FUNCTIONAL_SNP rs762815 chr6 32729642 Coding 6 4449 CEU:1.0;1.0, CHB:1.0;0.655, JPT:1.0;0.924, YRI:1.0;0.853 FUNCTIONAL_SNP rs2071551 chr6 32729459 Coding 6 4266 CEU:1.0;1.0, CHB:1.0;0.677, JPT:1.0;0.924, YRI:1.0;0.853 FUNCTIONAL_SNP rs3213485 chr6 32724719 Exon,non-coding 7 474 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276440 chr6 32714783 Exon,non-coding 6 10410 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;0.962 FUNCTIONAL_SNP rs9276558 chr6 32724061 Exon,non-coding 5b 1132 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;1.0 FUNCTIONAL_SNP rs1573649 chr6 32731258 Exon,non-coding 4 6065 CEU:1.0;0.851, YRI:1.0;0.962 FUNCTIONAL_SNP rs9276522 chr6 32720462 Intergenic 4 4731 CEU:1.0;1.0, CHB:0.905;0.748, JPT:1.0;0.517, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276524 chr6 32720531 Intergenic 4 4662 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;1.0 FUNCTIONAL_SNP rs1978029 chr6 32731710 Intergenic 4 6517 CEU:1.0;0.851, JPT:1.0;0.706, YRI:1.0;0.961 FUNCTIONAL_SNP rs7773149 chr6 32706042 Intergenic 4 19151 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs1573648 chr6 32731439 Intergenic 4 6246 CEU:1.0;0.851, JPT:1.0;0.706, YRI:1.0;0.926 FUNCTIONAL_SNP rs1573646 chr6 32731624 Intergenic 5a 6431 CEU:1.0;0.851, YRI:1.0;0.925 FUNCTIONAL_SNP rs9276454 chr6 32715846 Intergenic 5b 9347 CEU:1.0;1.0, CHB:0.911;0.764, JPT:1.0;0.588, YRI:1.0;1.0 FUNCTIONAL_SNP rs2006165 chr6 32728787 Intron 5b 3594 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:0.957;0.814 FUNCTIONAL_SNP rs6902723 chr6 32731960 Intergenic 5b 6767 CEU:1.0;0.851, YRI:1.0;0.926 FUNCTIONAL_SNP rs9276427 chr6 32711857 Intron 6 13336 CEU:1.0;0.817, CHB:1.0;0.916, JPT:1.0;0.706, YRI:1.0;0.962 FUNCTIONAL_SNP rs9276429 chr6 32712104 Intron 6 13089 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs9276430 chr6 32712182 Intron 6 13011 CEU:1.0;1.0 FUNCTIONAL_SNP rs7382794 chr6 32734030 Intergenic 6 8837 CEU:1.0;0.851, YRI:1.0;0.962 FUNCTIONAL_SNP rs9276490 chr6 32718681 Intergenic 6 6512 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;0.962 FUNCTIONAL_SNP rs9276431 chr6 32712247 Intron 6 12946 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs9276432 chr6 32712384 Intron 6 12809 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs9276534 chr6 32721195 Intergenic 6 3998 CEU:1.0;1.0, CHB:0.91;0.762, JPT:1.0;0.608, YRI:1.0;1.0 FUNCTIONAL_SNP rs4248169 chr6 32728554 Intron 6 3361 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:0.957;0.814 FUNCTIONAL_SNP rs2395256 chr6 32728588 Intron 6 3395 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;0.853 FUNCTIONAL_SNP rs2395264 chr6 32735295 Intergenic 6 10102 CEU:1.0;0.848, JPT:1.0;0.742, YRI:1.0;0.962 FUNCTIONAL_SNP rs5019296 chr6 32733446 Intergenic 6 8253 CEU:1.0;0.851, JPT:1.0;0.706, YRI:1.0;0.962 FUNCTIONAL_SNP rs9276586 chr6 32732937 Intergenic 6 7744 CEU:1.0;0.851, JPT:1.0;0.706, YRI:1.0;0.962 FUNCTIONAL_SNP rs2213567 chr6 32711655 Intron 6 13538 CEU:1.0;1.0 FUNCTIONAL_SNP rs2213568 chr6 32711576 Intron 6 13617 CEU:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs2213572 chr6 32719804 Intergenic 6 5389 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;1.0 FUNCTIONAL_SNP rs7453920 chr6 32730012 Intron 6 4819 CEU:1.0;1.0, CHB:1.0;0.677, JPT:1.0;0.924, YRI:1.0;0.853 FUNCTIONAL_SNP rs9276197 chr6 32699587 Intergenic 6 25606 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs2051549 chr6 32730086 Intron 6 4893 CEU:1.0;1.0, CHB:1.0;0.677, JPT:1.0;0.924, YRI:1.0;0.853 FUNCTIONAL_SNP rs7753017 chr6 32727325 Intron 6 2132 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;1.0 FUNCTIONAL_SNP rs6903130 chr6 32732210 Intergenic 6 7017 CEU:1.0;0.851, YRI:1.0;0.926 FUNCTIONAL_SNP rs2227128 chr6 32711400 Intron 6 13793 CEU:1.0;1.0, CHB:1.0;0.915, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs9276234 chr6 32700848 Intergenic 6 24345 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs9276370 chr6 32707295 Intergenic 6 17898 CEU:1.0;0.924, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs1023449 chr6 32727905 Intron 6 2712 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;0.853 FUNCTIONAL_SNP rs7768538 chr6 32729821 Intron 6 4628 CEU:1.0;1.0, CHB:1.0;0.677, JPT:1.0;0.924, YRI:0.957;0.814 FUNCTIONAL_SNP rs1894412 chr6 32734829 Intergenic 7 9636 CEU:1.0;0.851, YRI:1.0;0.926 FUNCTIONAL_SNP rs9276447 chr6 32715569 Intergenic 7 9624 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;0.962 FUNCTIONAL_SNP rs9276482 chr6 32718162 Intergenic 7 7031 CEU:1.0;1.0, CHB:1.0;0.677, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276466 chr6 32716452 Intergenic 7 8741 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.586, YRI:1.0;1.0 FUNCTIONAL_SNP rs9276428 chr6 32712085 Intron 7 13108 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs2859113 chr6 32697785 Intergenic 7 27408 CEU:1.0;1.0 FUNCTIONAL_SNP rs2395252 chr6 32711322 Intron 7 13871 CEU:1.0;1.0, CHB:1.0;0.915, JPT:1.0;1.0, YRI:1.0;0.913 FUNCTIONAL_SNP rs7381625 chr6 32734169 Intergenic 7 8976 CEU:1.0;0.851, YRI:1.0;0.926 FUNCTIONAL_SNP rs7751856 chr6 32698988 Intergenic 7 26205 CEU:1.0;1.0, JPT:1.0;0.663 FUNCTIONAL_SNP rs9276602 chr6 32734327 Intergenic 7 9134 CEU:1.0;0.851, YRI:1.0;0.956 FUNCTIONAL_SNP rs2213569 chr6 32721574 Intergenic 7 3619 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;1.0 FUNCTIONAL_SNP rs2213571 chr6 32719937 Intergenic 7 5256 CEU:1.0;1.0, CHB:0.912;0.765, JPT:1.0;0.561, YRI:1.0;1.0 FUNCTIONAL_SNP rs6918401 chr6 32722625 Intergenic 7 2568 CEU:1.0;1.0, CHB:0.904;0.747, JPT:1.0;0.606, YRI:1.0;1.0 FUNCTIONAL_SNP rs2157327 chr6 32719491 Intergenic 7 5702 CEU:1.0;0.959, CHB:0.912;0.765, JPT:1.0;0.588, YRI:1.0;0.962 FUNCTIONAL_SNP rs2859071 chr6 32703366 Intergenic 7 21827 CEU:1.0;1.0, CHB:0.909;0.76, JPT:1.0;0.581 FUNCTIONAL_SNP rs9276311 chr6 32704659 Intergenic 7 20534 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0 LEAD_SNP rs7453920 chr6 32730012 Intron 6 ASSOCIATION 21750111 Hepatitis B 27.2218487496 HLA-DQB2 FUNCTIONAL_SNP rs762815 chr6 32729642 Coding 6 370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2071551 chr6 32729459 Coding 6 553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2051549 chr6 32730086 Intron 6 74 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7768538 chr6 32729821 Intron 6 191 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs9276482 chr6 32718162 Intergenic 7 11850 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.852 LEAD_SNP rs9357155 chr6 32809848 Intron 6 ASSOCIATION 21399633 Nephropathy 11.6989700043 PSMB8 FUNCTIONAL_SNP rs2071543 chr6 32811629 Coding 4 1781 CEU:1.0;1.0, CHB:1.0;0.843, JPT:1.0;0.842, YRI:1.0;0.784 FUNCTIONAL_SNP rs2284190 chr6 32819517 Intron 6 9669 CEU:1.0;1.0, CHB:1.0;0.843, JPT:1.0;0.842, YRI:1.0;0.784 FUNCTIONAL_SNP rs6903433 chr6 32842975 Intron 7 33127 CEU:1.0;1.0, JPT:0.714;0.509, YRI:1.0;0.784 LEAD_SNP rs3077 chr6 33033022 Exon,non-coding 6 ASSOCIATION 21750111 Hepatitis B 60.6989700043 HLA-DPA1 FUNCTIONAL_SNP rs1042190 chr6 33036999 Coding 5a 3977 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6914849 chr6 33040715 Intron 3a 7693 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs1431400 chr6 33041176 Intron 4 8154 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs3830066 chr6 33037187 Intron 4 4165 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2071351 chr6 33043930 Intron 4 10908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:0.947;0.896 FUNCTIONAL_SNP rs1431401 chr6 33041186 Intron 4 8164 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs9348904 chr6 33040835 Intron 5a 7813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs2301220 chr6 33038766 Intron 5a 5744 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2071353 chr6 33044257 Intron 5a 11235 CEU:1.0;0.913, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs4604307 chr6 33025671 Intergenic 5b 7351 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2395309 chr6 33026246 Intergenic 6 6776 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2301224 chr6 33038369 Intron 6 5347 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17214519 chr6 33032188 Intergenic 7 834 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1431399 chr6 33041034 Intron 7 8012 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;1.0, YRI:1.0;0.95 LEAD_SNP rs9277535 chr6 33054861 Exon,non-coding 6 ASSOCIATION 21764829 Hepatitis B vaccine response 11.5228787453 HLA-DPB1 ASSOCIATION 21750111 Hepatitis B 53.5228787453 HLA-DPB1 ASSOCIATION 19349983 Hepatitis B 38.2218487496 HLA-DPB1 FUNCTIONAL_SNP rs9277558 chr6 33056711 Intergenic 4 1850 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9277559 chr6 33056731 Intergenic 4 1870 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3117229 chr6 33056069 Intergenic 5a 1208 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3128968 chr6 33056253 Intergenic 5a 1392 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3130186 chr6 33056207 Intergenic 5a 1346 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9277464 chr6 33053352 Intron 6 1509 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9277489 chr6 33053942 Intron 6 919 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3117035 chr6 33086249 Exon,non-coding 6 ASSOCIATION 20031603 RR interval (heart rate) 6.0 HLA-DPB2 FUNCTIONAL_SNP rs3117039 chr6 33085851 Intron 4 398 CEU:1.0;1.0, CHB:1.0;0.775, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3117034 chr6 33087358 Intergenic 7 1109 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1883414 chr6 33086448 Exon,non-coding 4 ASSOCIATION 21399633 Nephropathy 8.30102999566 HLA-DPB2 FUNCTIONAL_SNP rs3129294 chr6 33084671 Intron 7 1777 CEU:1.0;0.842, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.719 LEAD_SNP rs2254287 chr6 33143948 Intron 5b ASSOCIATION 18193043 LDL cholesterol 7.30102999566 COL11A2 FUNCTIONAL_SNP rs1799908 chr6 33144243 Coding 5b 295 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9394152 chr6 33465482 Intergenic 7 ASSOCIATION 21685187 Chronic obstructive pulmonary disease 7.15490195999 ZBTB9 - BAK1 LEAD_SNP rs9296092 chr6 33478496 Intergenic 7 ASSOCIATION 21685187 Chronic obstructive pulmonary disease 6.22184874962 ZBTB9 - BAK1 FUNCTIONAL_SNP rs769051 chr6 33473894 Intergenic 4 4602 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs7747216 chr6 33476718 Intergenic 4 1778 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs9380362 chr6 33467734 Intergenic 7 10762 CEU:1.0;0.96, CHB:1.0;0.821, JPT:1.0;0.864 FUNCTIONAL_SNP rs7743060 chr6 33470519 Intergenic 7 7977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864, YRI:1.0;1.0 LEAD_SNP rs210135 chr6 33540692 Exon,non-coding 5b ASSOCIATION 19820697 Hematological parameters 9.39794000867 BAK1 FUNCTIONAL_SNP rs210142 chr6 33546837 Intron 2b 6145 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs210134 chr6 33540209 Intergenic 5b 483 CEU:1.0;1.0, CHB:0.918;0.609, JPT:1.0;0.868, YRI:1.0;1.0 LEAD_SNP rs210138 chr6 33542538 Intron 7 ASSOCIATION 19483681 Testicular germ cell tumor 13.0 BAK1 LEAD_SNP rs999943 chr6 33624733 Intron 5b ASSOCIATION 19553259 Obesity (extreme) 6.0 ITPR3 FUNCTIONAL_SNP rs2274197 chr6 33645115 Intron 5b 20382 CEU:1.0;0.826, CHB:1.0;0.793, JPT:1.0;1.0 FUNCTIONAL_SNP rs2274200 chr6 33625696 Intron 5b 963 CEU:1.0;0.882, CHB:1.0;0.793, JPT:1.0;0.939 FUNCTIONAL_SNP rs1570760 chr6 33622933 Intron 5b 1800 CEU:0.936;0.825, CHB:1.0;0.787, JPT:1.0;0.939 FUNCTIONAL_SNP rs9357162 chr6 33613344 Intron 5b 11389 CEU:1.0;0.882, CHB:0.935;0.736, JPT:1.0;0.939 FUNCTIONAL_SNP rs9366826 chr6 33619184 Intron 7 5549 CEU:1.0;0.882, CHB:0.935;0.736, JPT:1.0;0.939 FUNCTIONAL_SNP rs12205634 chr6 33611667 Intron 7 13066 CEU:1.0;0.882 FUNCTIONAL_SNP rs10947422 chr6 33611351 Intron 7 13382 CEU:1.0;0.881, CHB:0.929;0.719, JPT:1.0;0.925 LEAD_SNP rs9469578 chr6 33706479 Intron 5a ASSOCIATION 20558539 Serum phosphorus levels 11.0 IP6K3 FUNCTIONAL_SNP rs9469580 chr6 33715837 Intergenic 5b 9358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs16869463 chr6 33714983 Intergenic 5b 8504 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.733 FUNCTIONAL_SNP rs6942022 chr6 33710284 Intron 7 3805 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 LEAD_SNP rs2274459 chr6 33762242 Intergenic 7 ASSOCIATION 19553259 Obesity (extreme) 5.22184874962 MLN FUNCTIONAL_SNP rs12189725 chr6 33703394 Exon,non-coding 6 58848 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs13200063 chr6 33730171 Intergenic 2a 32071 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3806107 chr6 33767413 Intron 2b 5171 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864 FUNCTIONAL_SNP rs12192035 chr6 33720065 Intergenic 2b 42177 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs2296749 chr6 33763127 Intron 4 885 CEU:1.0;1.0 FUNCTIONAL_SNP rs3793080 chr6 33767803 Intron 4 5561 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.864 FUNCTIONAL_SNP rs12211554 chr6 33725788 Intergenic 4 36454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs877187 chr6 33706211 Intron 5a 56031 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs12198383 chr6 33773304 Intergenic 5b 11062 CEU:1.0;0.89 FUNCTIONAL_SNP rs6925337 chr6 33732219 Intergenic 7 30023 CEU:1.0;0.815, CHB:1.0;0.65, JPT:1.0;1.0 FUNCTIONAL_SNP rs729376 chr6 33704823 Intron 7 57419 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12211490 chr6 33725528 Intergenic 7 36714 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12193658 chr6 33705528 Intron 7 56714 CEU:1.0;1.0 LEAD_SNP rs7742369 chr6 34165721 Intergenic 4 ASSOCIATION 20189936 Height 13.0 KRT18P9 - CYCSL1 LEAD_SNP rs1776897 chr6 34195011 Intergenic 4 ASSOCIATION 20397748 Height 5.15490195999 CYCSL1 - HMGA1 ASSOCIATION 19343178 Height 10.096910013 CYCSL1 - HMGA1 ASSOCIATION 18391951 Height 8.0 CYCSL1 - HMGA1 FUNCTIONAL_SNP rs1150781 chr6 34214322 Coding 2b 19311 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.64 FUNCTIONAL_SNP rs2780226 chr6 34199092 Intergenic 3a 4081 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12214804 chr6 34188866 Intergenic 7 6145 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs6918981 chr6 34238514 Intergenic 6 ASSOCIATION 19893584 Height 7.69897000434 RPL35P2 - NUDT3 ASSOCIATION 19396169 Height 7.52287874528 RPL35P2 - NUDT3 LEAD_SNP rs206936 chr6 34302869 Intron 5b ASSOCIATION 20935630 Body mass index 7.52287874528 NUDT3 FUNCTIONAL_SNP rs414739 chr6 34344653 Intron 5b 41784 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.857 FUNCTIONAL_SNP rs464553 chr6 34315079 Intron 5b 12210 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs9366856 chr6 34405715 Intergenic 5b 102846 CEU:1.0;1.0, CHB:0.849;0.688, JPT:1.0;0.826 FUNCTIONAL_SNP rs206921 chr6 34283355 Intron 5b 19514 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs206919 chr6 34349541 Intron 6 46672 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.858 FUNCTIONAL_SNP rs6930978 chr6 34270668 Intron 6 32201 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.908, YRI:1.0;0.796 FUNCTIONAL_SNP rs3798560 chr6 34343566 Intron 7 40697 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.858 FUNCTIONAL_SNP rs3913009 chr6 34397848 Intergenic 7 94979 CEU:1.0;1.0, CHB:0.947;0.779, JPT:1.0;0.826 FUNCTIONAL_SNP rs568502 chr6 34279401 Intron 7 23468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.908, YRI:1.0;0.887 FUNCTIONAL_SNP rs6912971 chr6 34355658 Intron 7 52789 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs611928 chr6 34279400 Intron 7 23469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.908, YRI:1.0;0.858 FUNCTIONAL_SNP rs206942 chr6 34255476 Intergenic 7 47393 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;0.908, YRI:1.0;0.858 FUNCTIONAL_SNP rs9394215 chr6 34399872 Intergenic 7 97003 CEU:1.0;1.0, YRI:0.777;0.545 FUNCTIONAL_SNP rs9368813 chr6 34399814 Intergenic 7 96945 CEU:1.0;1.0, CHB:1.0;0.829, JPT:1.0;0.826, YRI:0.861;0.582 LEAD_SNP rs2814993 chr6 34618893 Intron 5b ASSOCIATION 18391952 Height 11.3979400087 C6orf106 LEAD_SNP rs2140418 chr6 34975415 Intron 6 ASSOCIATION 21529783 Alcoholism (alcohol dependence factor score) 5.39794000867 ANKS1A ASSOCIATION 21529783 Alcoholism (alcohol use disorder factor score) 5.39794000867 ANKS1A FUNCTIONAL_SNP rs2293242 chr6 34949607 Coding 7 25808 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs9380469 chr6 34877314 Intron 5b 98101 CEU:1.0;0.816, CHB:1.0;0.625 FUNCTIONAL_SNP rs12212217 chr6 34972078 Intron 5b 3337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2177381 chr6 34977375 Intron 6 1960 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs10947536 chr6 34975993 Intron 6 578 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs847843 chr6 34915819 Intron 6 59596 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs6932857 chr6 34944863 Intron 7 30552 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.867, YRI:1.0;0.963 FUNCTIONAL_SNP rs847850 chr6 34904968 Intron 7 70447 CEU:1.0;0.846, CHB:1.0;0.509, JPT:1.0;0.519 FUNCTIONAL_SNP rs1737727 chr6 34904488 Intron 7 70927 CEU:1.0;1.0, CHB:1.0;0.911, JPT:0.947;0.816, YRI:1.0;0.962 LEAD_SNP rs17609940 chr6 35034800 Intron 5b ASSOCIATION 21378990 Coronary heart disease 8.0 ANKS1A FUNCTIONAL_SNP rs12197124 chr6 35029419 Intron 5b 5381 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs820082 chr6 35031441 Intron 5b 3359 CEU:1.0;0.941, CHB:1.0;0.551, JPT:1.0;1.0 FUNCTIONAL_SNP rs12206298 chr6 35009411 Intron 5b 25389 CEU:1.0;0.838, CHB:1.0;0.551, JPT:1.0;1.0 FUNCTIONAL_SNP rs2104332 chr6 35169708 Intergenic 6 134908 CEU:0.937;0.825, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12204265 chr6 35008247 Intron 7 26553 CEU:1.0;0.838, CHB:1.0;0.551, JPT:1.0;1.0 FUNCTIONAL_SNP rs12205331 chr6 34898455 Intron 7 136345 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12202483 chr6 35007636 Intron 7 27164 CEU:1.0;0.836, CHB:1.0;0.648, JPT:1.0;1.0 FUNCTIONAL_SNP rs2077750 chr6 35089811 Intron 7 55011 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs9658108 chr6 35363757 Intron 5b ASSOCIATION 20195266 Response to antipsychotic treatment 6.30102999566 PPARD FUNCTIONAL_SNP rs6935950 chr6 35413626 Intergenic 4 49869 CEU:1.0;1.0 FUNCTIONAL_SNP rs7739161 chr6 35439758 Intergenic 4 76001 CEU:1.0;1.0 FUNCTIONAL_SNP rs9658118 chr6 35365828 Intron 5b 2071 CEU:1.0;1.0 FUNCTIONAL_SNP rs9658089 chr6 35345159 Intron 5b 18598 CEU:1.0;1.0 FUNCTIONAL_SNP rs6915115 chr6 35358945 Intron 5b 4812 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9658136 chr6 35379346 Intron 7 15589 CEU:1.0;1.0 LEAD_SNP rs4713858 chr6 35402785 Intergenic 6 ASSOCIATION 18391951 Height 7.39794000867 PPARD - MKRN6P LEAD_SNP rs1321311 chr6 36622900 Intron 5b ASSOCIATION 20062063 Electrocardiographic traits 9.52287874528 SRSF3 - CDKN1A FUNCTIONAL_SNP rs1321313 chr6 36618821 Intron 2b 4079 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0 FUNCTIONAL_SNP rs9470361 chr6 36623379 Intron 4 479 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.895, YRI:1.0;0.711 FUNCTIONAL_SNP rs4331968 chr6 36623243 Intron 4 343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs9462210 chr6 36628953 Intron 4 6053 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.649 FUNCTIONAL_SNP rs7756236 chr6 36627053 Intron 5b 4153 CEU:1.0;0.953, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;0.702 FUNCTIONAL_SNP rs1321310 chr6 36623124 Intron 5b 224 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs9470366 chr6 36625562 Intron 7 2662 CEU:1.0;0.908, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.687 FUNCTIONAL_SNP rs9462207 chr6 36627599 Intron 7 4699 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs9470361 chr6 36623379 Intron 4 ASSOCIATION 21076409 Ventricular conduction 26.5228787453 SRSF3 - CDKN1A FUNCTIONAL_SNP rs1321313 chr6 36618821 Intron 2b 4558 CEU:1.0;1.0, CHB:1.0;0.729, JPT:1.0;0.896 FUNCTIONAL_SNP rs4331968 chr6 36623243 Intron 4 136 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.896, YRI:1.0;0.624 FUNCTIONAL_SNP rs9462210 chr6 36628953 Intron 4 5574 CEU:1.0;0.951, CHB:1.0;0.864, JPT:1.0;0.896, YRI:1.0;0.863 FUNCTIONAL_SNP rs7756236 chr6 36627053 Intron 5b 3674 CEU:1.0;0.951, CHB:1.0;0.759, JPT:1.0;0.896, YRI:1.0;0.905 FUNCTIONAL_SNP rs1321310 chr6 36623124 Intron 5b 255 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.896, YRI:1.0;0.595 FUNCTIONAL_SNP rs1321311 chr6 36622900 Intron 5b 479 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.895, YRI:1.0;0.711 FUNCTIONAL_SNP rs9470366 chr6 36625562 Intron 7 2183 CEU:1.0;0.902, CHB:1.0;0.846, JPT:1.0;0.896, YRI:0.945;0.847 FUNCTIONAL_SNP rs9462207 chr6 36627599 Intron 7 4220 CEU:1.0;0.951, CHB:1.0;0.864, JPT:1.0;0.896 LEAD_SNP rs1405069 chr6 36922684 Coding 5b ASSOCIATION 20237162 Plasma chemerin levels 5.22184874962 PI16 LEAD_SNP rs904251 chr6 37451696 Intron 5b ASSOCIATION 19734545 Cognitive performance 5.15490195999 C6orf129 LEAD_SNP rs9296249 chr6 38365841 Intron 7 ASSOCIATION 17637780 Restless legs syndrome 17.3979400087 BTBD9 LEAD_SNP rs3923809 chr6 38440970 Intron 6 ASSOCIATION 17634447 Restless legs syndrome 17.0 BTBD9 LEAD_SNP rs4714261 chr6 39539207 Intron 7 ASSOCIATION 18846501 Attention deficit hyperactivity disorder symptoms (interaction) 5.69897000434 KIF6 FUNCTIONAL_SNP rs9471124 chr6 39524197 Intron 5b 15010 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.927;0.859 FUNCTIONAL_SNP rs11758868 chr6 39528952 Intron 5b 10255 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs9471129 chr6 39537170 Intron 7 2037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2395730 chr6 39784365 Intron 7 ASSOCIATION 20010834 Pulmonary function 7.09691001301 DAAM2 FUNCTIONAL_SNP rs3008798 chr6 39779862 Intron 7 4503 CEU:1.0;0.888 FUNCTIONAL_SNP rs3008801 chr6 39782092 Intron 7 2273 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.956 FUNCTIONAL_SNP rs3008804 chr6 39783629 Intron 7 736 CEU:1.0;0.809, CHB:1.0;0.8, JPT:1.0;0.679, YRI:1.0;0.819 LEAD_SNP rs10484761 chr6 40802261 Intergenic 7 ASSOCIATION 21642993 Esophageal cancer 11.15490196 LRFN2 - UNC5CL LEAD_SNP rs9471576 chr6 41303805 Intron 5b ASSOCIATION 21116278 Total ventricular volume 5.69897000434 NCR2 FUNCTIONAL_SNP rs9471577 chr6 41303995 Coding 7 190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs16894604 chr6 41302294 Intergenic 5b 1511 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs6927186 chr6 41303207 Intergenic 5b 598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs9471575 chr6 41303784 Intron 5b 21 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;1.0 FUNCTIONAL_SNP rs9471579 chr6 41304691 Intron 5b 886 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs9471580 chr6 41304863 Intron 5b 1058 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs6939587 chr6 41305185 Intron 6 1380 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.853 FUNCTIONAL_SNP rs2236368 chr6 41309353 Intron 6 5548 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs9471578 chr6 41304241 Intron 6 436 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs6939396 chr6 41305075 Intron 7 1270 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs9471581 chr6 41306695 Intron 7 2890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 LEAD_SNP rs1983891 chr6 41536427 Intron 4 ASSOCIATION 20676098 Prostate cancer 7.09691001301 FOXP4 FUNCTIONAL_SNP rs2104506 chr6 41533579 Coding 5b 2848 CEU:1.0;0.904, CHB:0.945;0.808, JPT:1.0;0.948, YRI:1.0;0.963 FUNCTIONAL_SNP rs4714485 chr6 41536587 Intron 4 160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9381080 chr6 41527698 Intron 5b 8729 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs6917029 chr6 41548540 Intron 5b 12113 CEU:1.0;0.95, CHB:1.0;0.863, JPT:1.0;0.949, YRI:1.0;0.864 FUNCTIONAL_SNP rs1886816 chr6 41544494 Intron 5b 8067 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.929 FUNCTIONAL_SNP rs4714487 chr6 41547312 Intron 5b 10885 CEU:1.0;0.95, CHB:1.0;0.863, JPT:1.0;0.949, YRI:1.0;0.864 FUNCTIONAL_SNP rs7753653 chr6 41548430 Intron 7 12003 CEU:1.0;0.95, CHB:1.0;0.863, JPT:1.0;0.949, YRI:1.0;0.864 LEAD_SNP rs2842643 chr6 41650736 Intergenic 5b ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.52287874528 MDFI - TFEB FUNCTIONAL_SNP rs1062966 chr6 41652604 Coding 5b 1868 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs2073156 chr6 41657328 Intron 5b 6592 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs973361 chr6 41647403 Intergenic 5b 3333 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs2842646 chr6 41646885 Intergenic 5b 3851 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs9369302 chr6 41664121 Intron 7 13385 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 LEAD_SNP rs3218097 chr6 41905275 Intron 5b ASSOCIATION 20139978 Hematological and biochemical traits 10.0 CCND3 LEAD_SNP rs9349205 chr6 41925159 Intron 4 ASSOCIATION 19862010 Mean corpuscular hemoglobin 19.096910013 CCND3 ASSOCIATION 19862010 Mean corpuscular volume 31.0 CCND3 FUNCTIONAL_SNP rs9381094 chr6 41800629 Exon,non-coding 6 124530 CEU:1.0;0.817, CHB:1.0;0.847, JPT:1.0;0.822 FUNCTIONAL_SNP rs9357371 chr6 41885319 Intron 4 39840 CEU:1.0;0.817, CHB:1.0;0.847, JPT:1.0;0.91 FUNCTIONAL_SNP rs3218108 chr6 41902655 Intergenic 4 22504 CEU:1.0;0.817, CHB:1.0;0.895, JPT:1.0;0.91 FUNCTIONAL_SNP rs3218097 chr6 41905275 Intron 5b 19884 CEU:1.0;0.932, CHB:1.0;0.895, JPT:1.0;1.0 FUNCTIONAL_SNP rs3806113 chr6 41876335 Intron 6 48824 CEU:1.0;0.817, CHB:1.0;0.847, JPT:1.0;0.822, YRI:1.0;1.0 FUNCTIONAL_SNP rs9381097 chr6 41847800 Intron 6 77359 CEU:1.0;0.817, CHB:1.0;0.847, JPT:1.0;0.822 FUNCTIONAL_SNP rs9349204 chr6 41914378 Intron 6 10781 CEU:1.0;0.882, CHB:1.0;0.614, JPT:1.0;0.604 FUNCTIONAL_SNP rs9369312 chr6 41841535 Intron 7 83624 CEU:1.0;0.831, CHB:1.0;0.85, JPT:1.0;0.824 FUNCTIONAL_SNP rs9394834 chr6 41806793 Intron 7 118366 CEU:1.0;0.832, CHB:1.0;0.85, JPT:1.0;0.835 LEAD_SNP rs11970772 chr6 41925290 Intron 4 ASSOCIATION 19820697 Hematological parameters 18.15490196 CCND3 LEAD_SNP rs11968166 chr6 41925304 Intron 4 ASSOCIATION 21507922 Neutrophil count 5.09691001301 CCND3 FUNCTIONAL_SNP rs3218086 chr6 41910064 Intron 4 15240 CEU:1.0;1.0, CHB:0.944;0.845, JPT:1.0;1.0, YRI:1.0;0.924 LEAD_SNP rs6458307 chr6 42731115 Intron 4 ASSOCIATION 17554300 Bipolar disorder 5.39794000867 TBCC - FLJ38717 LEAD_SNP rs6905288 chr6 43758873 Intergenic 7 ASSOCIATION 20935629 Waist-hip ratio 25.6989700043 VEGFA - C6orf223 LEAD_SNP rs943072 chr6 43795968 Intergenic 4 ASSOCIATION 21297633 Ulcerative colitis 9.69897000434 VEGFA - C6orf223 FUNCTIONAL_SNP rs4273687 chr6 43796146 Intergenic 4 178 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6902871 chr6 43791897 Intergenic 4 4071 CEU:1.0;0.823, CHB:1.0;1.0, JPT:1.0;0.806 FUNCTIONAL_SNP rs2396087 chr6 43796058 Intergenic 5a 90 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6911896 chr6 43790318 Intergenic 6 5650 CEU:1.0;0.825, CHB:1.0;0.936, JPT:1.0;0.92 LEAD_SNP rs881858 chr6 43806609 Intergenic 4 ASSOCIATION 20383146 Chronic kidney disease 13.0457574906 VEGFA - C6orf223 FUNCTIONAL_SNP rs2396083 chr6 43804808 Intergenic 4 1801 CEU:0.95;0.821, CHB:1.0;1.0, JPT:0.882;0.698 FUNCTIONAL_SNP rs9472135 chr6 43809802 Intergenic 5a 3193 CEU:0.952;0.864, CHB:1.0;0.537, JPT:0.882;0.697 FUNCTIONAL_SNP rs744103 chr6 43805362 Intergenic 5b 1247 CEU:0.95;0.821, CHB:1.0;1.0, JPT:1.0;0.888 LEAD_SNP rs9472138 chr6 43811762 Intergenic 5a ASSOCIATION 18372903 Type 2 diabetes 5.39794000867 VEGFA - C6orf223 FUNCTIONAL_SNP rs10456526 chr6 43814625 Intergenic 4 2863 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 LEAD_SNP rs4711751 chr6 43828582 Intergenic 7 ASSOCIATION 21665990 Age-related macular degeneration 8.04575749056 VEGFA - C6orf223 LEAD_SNP rs3799977 chr6 44837356 Intron 2b ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.30102999566 SUPT3H FUNCTIONAL_SNP rs2396372 chr6 44966867 Intron 5a 129511 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.941;0.885, YRI:1.0;1.0 FUNCTIONAL_SNP rs3799976 chr6 44835622 Intron 5a 1734 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3799973 chr6 44823727 Intron 5b 13629 CEU:1.0;0.804, CHB:1.0;0.942, JPT:1.0;0.938, YRI:1.0;0.907 FUNCTIONAL_SNP rs1329714 chr6 45003335 Intron 6 165979 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;0.935, YRI:1.0;0.816 FUNCTIONAL_SNP rs10948185 chr6 44901727 Intron 6 64371 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs1971482 chr6 44991113 Intron 6 153757 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs4714828 chr6 44846008 Intron 6 8652 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12525009 chr6 44875843 Intron 6 38487 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs10484627 chr6 44884267 Intron 6 46911 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4711807 chr6 44911652 Intron 6 74296 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs3799979 chr6 44845514 Intron 6 8158 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10948197 chr6 44967490 Intron 6 ASSOCIATION 19893584 Height 5.09691001301 SUPT3H FUNCTIONAL_SNP rs4714830 chr6 44955528 Intron 5a 11962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs12214778 chr6 44924412 Intron 5b 43078 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.934 FUNCTIONAL_SNP rs12196818 chr6 44911414 Intron 5b 56076 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.934 FUNCTIONAL_SNP rs11967188 chr6 44956925 Intron 6 10565 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 LEAD_SNP rs9395066 chr6 45095163 Intron 6 ASSOCIATION 18391951 Height 5.09691001301 SUPT3H FUNCTIONAL_SNP rs1980265 chr6 44928868 Intron 4 166295 CEU:1.0;0.855, CHB:1.0;0.896, JPT:1.0;0.943, YRI:1.0;0.959 FUNCTIONAL_SNP rs6899845 chr6 45043352 Intron 4 51811 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs9463081 chr6 45233108 Intron 4 137945 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.879 FUNCTIONAL_SNP rs1329713 chr6 45004028 Intron 5b 91135 CEU:1.0;0.924, CHB:1.0;0.896, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs6458419 chr6 45085038 Intron 5b 10125 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs2396425 chr6 45177025 Intron 6 81862 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.879 FUNCTIONAL_SNP rs9296453 chr6 45227432 Intron 6 132269 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.879 FUNCTIONAL_SNP rs10948186 chr6 44903248 Intron 6 191915 CEU:1.0;0.887, CHB:1.0;0.945, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs1023090 chr6 45012381 Intron 6 82782 CEU:1.0;0.924, CHB:1.0;0.946, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs9357469 chr6 45049811 Intron 6 45352 CEU:1.0;0.923, CHB:1.0;0.946, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs9357480 chr6 45219512 Intron 6 124349 CEU:1.0;0.958, CHB:1.0;0.946, JPT:1.0;0.945, YRI:1.0;0.879 FUNCTIONAL_SNP rs9357484 chr6 45265882 Intron 6 170719 CEU:0.956;0.876, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.879 FUNCTIONAL_SNP rs10948222 chr6 45244415 Intron 6 149252 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.879 FUNCTIONAL_SNP rs9369558 chr6 45274021 Intron 6 178858 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.879 FUNCTIONAL_SNP rs976699 chr6 44952852 Intron 6 142311 CEU:1.0;0.834, CHB:1.0;0.943, JPT:1.0;0.89, YRI:1.0;0.955 FUNCTIONAL_SNP rs4446571 chr6 45257662 Intron 6 162499 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.877 FUNCTIONAL_SNP rs9395095 chr6 45273877 Intron 6 178714 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs9357470 chr6 45065613 Intron 6 29550 CEU:1.0;0.923, CHB:1.0;0.946, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs3778507 chr6 44896803 Intron 6 198360 CEU:1.0;0.855, CHB:1.0;0.896, JPT:1.0;0.945, YRI:1.0;0.959 FUNCTIONAL_SNP rs4373351 chr6 45276324 Intron 7 181161 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 LEAD_SNP rs1805017 chr6 46684222 Coding 7 ASSOCIATION 20442857 Lipoprotein-associated phospholipase A2 activity and mass 13.2218487496 PLA2G7 FUNCTIONAL_SNP rs2270450 chr6 46644875 Exon,non-coding 5b 39347 CEU:1.0;0.894, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.897;0.766 FUNCTIONAL_SNP rs12195701 chr6 46687419 Intron 7 3197 CEU:1.0;0.886, JPT:1.0;0.611 LEAD_SNP rs2103868 chr6 47230615 Intron 5b ASSOCIATION 19165232 Panic disorder 5.30102999566 TNFRSF21 LEAD_SNP rs9349407 chr6 47453378 Intron 4 ASSOCIATION 21460841 Alzheimer's disease (late onset) 8.04575749056 CD2AP FUNCTIONAL_SNP rs4715019 chr6 47447041 Intron 2b 6337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs9296559 chr6 47452270 Intron 4 1108 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9296558 chr6 47451883 Intron 4 1495 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7754282 chr6 47502024 Intron 4 48646 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9395286 chr6 47575332 Intron 5a 121954 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7749167 chr6 47493940 Intron 5a 40562 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9395283 chr6 47551444 Intron 5a 98066 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1872505 chr6 47480975 Intron 5a 27597 CEU:1.0;1.0 FUNCTIONAL_SNP rs1004173 chr6 47445017 Intergenic 5b 8361 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs7738044 chr6 47469273 Intron 5b 15895 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9367279 chr6 47448336 Intron 5b 5042 CEU:1.0;1.0, CHB:0.874;0.764, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9349413 chr6 47511491 Intron 6 58113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9369716 chr6 47552180 Intron 6 98802 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs10948367 chr6 47585615 Intron 7 132237 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4715025 chr6 47483653 Intron 7 30275 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs2396825 chr6 47568696 Intron 7 115318 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9349416 chr6 47551938 Intron 7 98560 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9349417 chr6 47580657 Intron 7 127279 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9296561 chr6 47488938 Intron 7 35560 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1931833 chr6 47427281 Intergenic 7 26097 CEU:1.0;0.931, CHB:1.0;0.888, JPT:1.0;1.0, YRI:0.855;0.64 FUNCTIONAL_SNP rs10948363 chr6 47487762 Intron 7 34384 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs9381578 chr6 47556634 Intron 7 103256 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2171086 chr6 47590104 Intron 7 136726 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1485780 chr6 47556630 Intron 7 103252 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9395285 chr6 47554177 Intron 7 100799 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs9369717 chr6 47554468 Intron 7 101090 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 LEAD_SNP rs9473582 chr6 49488908 Intron 7 ASSOCIATION 20171287 Brain structure 6.09691001301 GLYATL3 FUNCTIONAL_SNP rs1480615 chr6 49479775 Coding 6 9133 CEU:0.955;0.874, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;0.635 FUNCTIONAL_SNP rs9367359 chr6 49494241 Coding 7 5333 CEU:1.0;0.958, CHB:1.0;0.862, JPT:1.0;0.697 FUNCTIONAL_SNP rs7757014 chr6 49491690 Intron 5a 2782 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.935 FUNCTIONAL_SNP rs2498470 chr6 49484073 Intron 5b 4835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs1947861 chr6 49482687 Intron 5b 6221 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.58 FUNCTIONAL_SNP rs4715134 chr6 49488287 Intron 5b 621 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6942364 chr6 49462920 Intergenic 6 25988 CEU:0.955;0.874, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;0.553 FUNCTIONAL_SNP rs9395500 chr6 49479930 Intron 6 8978 CEU:0.955;0.874, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;0.58 FUNCTIONAL_SNP rs9473567 chr6 49464369 Intergenic 6 24539 CEU:0.955;0.873, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs1480612 chr6 49482973 Intron 7 5935 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2498472 chr6 49486704 Intron 7 2204 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9395504 chr6 49494933 Intergenic 7 6025 CEU:0.955;0.874, CHB:0.886;0.676, JPT:1.0;0.625 LEAD_SNP rs2206277 chr6 50798526 Intron 7 ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 7.0 TFAP2B FUNCTIONAL_SNP rs6904450 chr6 50921602 Intergenic 5a 123076 CEU:1.0;0.889, CHB:1.0;0.583 FUNCTIONAL_SNP rs3857599 chr6 50938247 Intergenic 5a 139721 CEU:1.0;1.0, CHB:1.0;0.583 FUNCTIONAL_SNP rs4715210 chr6 50897251 Intergenic 5b 98725 CEU:1.0;1.0, CHB:1.0;0.579 FUNCTIONAL_SNP rs2207139 chr6 50845490 Intergenic 6 46964 CEU:1.0;1.0, CHB:1.0;0.583 FUNCTIONAL_SNP rs12529728 chr6 50896630 Intergenic 7 98104 CEU:1.0;1.0, CHB:1.0;0.583 FUNCTIONAL_SNP rs987237 chr6 50803050 Intron 7 4524 CEU:1.0;1.0, CHB:1.0;0.579, YRI:1.0;0.612 FUNCTIONAL_SNP rs734597 chr6 50836279 Intergenic 7 37753 CEU:1.0;1.0, CHB:1.0;0.579 FUNCTIONAL_SNP rs4715213 chr6 50911091 Intergenic 7 112565 CEU:1.0;1.0, CHB:1.0;0.553 FUNCTIONAL_SNP rs3857596 chr6 50905067 Intergenic 7 106541 CEU:1.0;1.0, CHB:1.0;0.579 FUNCTIONAL_SNP rs943005 chr6 50865820 Intergenic 7 67294 CEU:1.0;1.0, CHB:1.0;0.579 LEAD_SNP rs987237 chr6 50803050 Intron 7 ASSOCIATION 20935630 Body mass index 19.5228787453 TFAP2B ASSOCIATION 19557161 Adiposity 10.6989700043 TFAP2B FUNCTIONAL_SNP rs3857599 chr6 50938247 Intergenic 5a 135197 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.708 FUNCTIONAL_SNP rs4715210 chr6 50897251 Intergenic 5b 94201 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.708 FUNCTIONAL_SNP rs2207139 chr6 50845490 Intergenic 6 42440 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.767 FUNCTIONAL_SNP rs734597 chr6 50836279 Intergenic 7 33229 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.767 FUNCTIONAL_SNP rs943005 chr6 50865820 Intergenic 7 62770 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.767 FUNCTIONAL_SNP rs3857596 chr6 50905067 Intergenic 7 102017 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.708 FUNCTIONAL_SNP rs12529728 chr6 50896630 Intergenic 7 93580 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.708 FUNCTIONAL_SNP rs2206277 chr6 50798526 Intron 7 4524 CEU:1.0;1.0, CHB:1.0;0.579, YRI:1.0;0.612 FUNCTIONAL_SNP rs4715213 chr6 50911091 Intergenic 7 108041 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.708 LEAD_SNP rs190759 chr6 50987768 Intergenic 4 ASSOCIATION 21658281 Sudden cardiac arrest 5.30102999566 FTHL5 - RPS15AP20 LEAD_SNP rs283566 chr6 51058721 Intergenic 6 ASSOCIATION 19389651 Electrocardiographic conduction measures 5.04575749056 FTHL5 - RPS15AP20 FUNCTIONAL_SNP rs283559 chr6 51061789 Intergenic 5b 3068 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs188191 chr6 51052310 Intergenic 6 6411 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs2505284 chr6 51073865 Intergenic 7 15144 CEU:1.0;0.822, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 LEAD_SNP rs1555967 chr6 51159995 Intergenic 7 ASSOCIATION 19557197 Waist circumference 5.52287874528 FTHL5 - RPS15AP20 FUNCTIONAL_SNP rs2397026 chr6 51157533 Intergenic 5b 2462 CEU:0.929;0.863, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.918 LEAD_SNP rs10498792 chr6 51666631 Intron 7 ASSOCIATION 17903305 Prostate cancer 5.52287874528 PKHD1 LEAD_SNP rs735860 chr6 53123118 Intergenic 4 ASSOCIATION 20363506 Glaucoma 5.39794000867 GCM1 - ELOVL5 LEAD_SNP rs16885294 chr6 54265396 Intergenic 7 ASSOCIATION 20923822 Radiation response 6.39794000867 TINAG - CLNS1B FUNCTIONAL_SNP rs16885298 chr6 54268832 Intergenic 7 3436 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.785;0.616, YRI:0.947;0.853 FUNCTIONAL_SNP rs190276 chr6 54348200 Intergenic 7 82804 CEU:1.0;1.0 LEAD_SNP rs9367630 chr6 55148103 Intergenic 5a ASSOCIATION 20041166 HIV-1 control 7.0 HCRTR2 - GFRAL LEAD_SNP rs9500256 chr6 58308955 Intergenic 7 ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 5.30102999566 GAPDHP15 - KHDRBS2 FUNCTIONAL_SNP rs1343391 chr6 58344154 Intergenic 6 35199 CEU:1.0;0.959, CHB:0.941;0.67, JPT:1.0;0.623 FUNCTIONAL_SNP rs4928431 chr6 58306258 Intergenic 7 2697 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9391387 chr6 58327347 Intergenic 7 18392 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1322446 chr6 58311950 Intergenic 7 2995 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs726783 chr6 58332861 Intergenic 7 23906 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs6455128 chr6 62697746 Intron 6 ASSOCIATION 18464913 Protein quantitative trait loci 6.52287874528 KHDRBS2 LEAD_SNP rs682238 chr6 63160147 Intergenic 6 ASSOCIATION 20705733 Serum calcium 5.52287874528 KHDRBS2 - FKBP1C FUNCTIONAL_SNP rs2639451 chr6 63086844 Intergenic 5a 73303 CEU:1.0;1.0, CHB:0.901;0.812, JPT:1.0;0.57 FUNCTIONAL_SNP rs2639419 chr6 63104240 Intergenic 6 55907 CEU:1.0;1.0, CHB:0.884;0.782, JPT:1.0;1.0 FUNCTIONAL_SNP rs2639449 chr6 63086197 Intergenic 6 73950 CEU:1.0;1.0, CHB:0.884;0.781, JPT:1.0;0.57 FUNCTIONAL_SNP rs2639450 chr6 63086240 Intergenic 6 73907 CEU:1.0;1.0, CHB:0.893;0.798, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2842798 chr6 63082734 Intergenic 6 77413 CEU:1.0;1.0, CHB:0.884;0.781, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs646854 chr6 63152724 Intergenic 6 7423 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2814683 chr6 63145913 Intergenic 6 14234 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs581435 chr6 63153926 Intergenic 6 6221 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs2452462 chr6 63138227 Intergenic 6 21920 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs596571 chr6 63162908 Intergenic 7 2761 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2639400 chr6 63090188 Intergenic 7 69959 CEU:1.0;1.0, CHB:0.901;0.811, JPT:1.0;1.0 FUNCTIONAL_SNP rs2639447 chr6 63085970 Intergenic 7 74177 CEU:1.0;1.0, CHB:0.901;0.812, JPT:1.0;0.525 FUNCTIONAL_SNP rs2639448 chr6 63086002 Intergenic 7 74145 CEU:1.0;1.0, CHB:0.901;0.812, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs675484 chr6 63154495 Intergenic 7 5652 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0, YRI:1.0;0.742 FUNCTIONAL_SNP rs2814658 chr6 63083366 Intergenic 7 76781 CEU:1.0;1.0, CHB:0.901;0.812, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2814660 chr6 63082948 Intergenic 7 77199 CEU:1.0;1.0, CHB:0.9;0.81, JPT:1.0;0.524 FUNCTIONAL_SNP rs2492805 chr6 63117685 Intergenic 7 42462 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0 FUNCTIONAL_SNP rs674193 chr6 63160790 Intergenic 7 643 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2260966 chr6 63102796 Intergenic 7 57351 CEU:1.0;1.0, CHB:0.884;0.781, JPT:1.0;1.0 LEAD_SNP rs9354308 chr6 66565353 Intergenic 7 ASSOCIATION 19043545 Serum metabolites 6.52287874528 ADH5P4 - NUFIP1P FUNCTIONAL_SNP rs9360161 chr6 66565457 Intergenic 6 104 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9342503 chr6 66565436 Intergenic 7 83 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1938063 chr6 66559098 Intergenic 7 6255 CEU:1.0;0.888, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.812 LEAD_SNP rs11970254 chr6 67649216 Intergenic 7 ASSOCIATION 20171287 Brain structure 6.22184874962 RNU7-66P - BAI3 FUNCTIONAL_SNP rs10944938 chr6 67651030 Intergenic 7 1814 CEU:0.957;0.879, CHB:0.924;0.702, JPT:1.0;0.876, YRI:1.0;0.756 FUNCTIONAL_SNP rs13208784 chr6 67652222 Intergenic 7 3006 CEU:1.0;0.959, CHB:1.0;0.767, JPT:1.0;0.876 LEAD_SNP rs3757057 chr6 70074232 Intron 6 ASSOCIATION 20339536 Response to statin therapy 5.39794000867 BAI3 FUNCTIONAL_SNP rs3737019 chr6 70049070 Intron 6 25162 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16900648 chr6 70038567 Intron 6 35665 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1321974 chr6 70045101 Intron 6 29131 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3757054 chr6 70037944 Intron 6 36288 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2145889 chr6 70024534 Intron 7 49698 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1321982 chr6 70023164 Intron 7 51068 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3757053 chr6 70033536 Intron 7 40696 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1048886 chr6 71289189 Coding 6 ASSOCIATION 21490949 Type 2 diabetes 7.52287874528 C6orf57 LEAD_SNP rs11968814 chr6 71776971 Intergenic 7 ASSOCIATION 21326311 F-cell distribution 6.04575749056 B3GAT2 - OGFRL1 LEAD_SNP rs1727638 chr6 72139572 Intergenic 7 ASSOCIATION 20932310 AB1-42 6.0 C6orf155 - KRT19P1 LEAD_SNP rs10455248 chr6 72482458 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 5.39794000867 KRT19P1 - RIMS1 LEAD_SNP rs3747767 chr6 80257281 Intergenic 6 ASSOCIATION 21190210 Hoarding 6.15490195999 LCA5 - SH3BGRL2 FUNCTIONAL_SNP rs9352737 chr6 80180943 Intergenic 4 76338 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;1.0 FUNCTIONAL_SNP rs9361538 chr6 80243639 Intron 5b 13642 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs9352736 chr6 80178020 Intergenic 5b 79261 CEU:1.0;1.0, CHB:0.952;0.866, JPT:1.0;1.0 FUNCTIONAL_SNP rs9352747 chr6 80244548 Intron 5b 12733 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs13206818 chr6 80210437 Intron 5b 46844 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs4706789 chr6 80178365 Intergenic 5b 78916 CEU:1.0;1.0, CHB:0.951;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs9359383 chr6 80258802 Intergenic 6 1521 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9359384 chr6 80266430 Intergenic 6 9149 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2047896 chr6 80232768 Intron 6 24513 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs4055084 chr6 80184512 Intergenic 6 72769 CEU:1.0;1.0 FUNCTIONAL_SNP rs3747766 chr6 80257130 Intergenic 6 151 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9341782 chr6 80268812 Intergenic 6 11531 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7754849 chr6 80204187 Intron 6 53094 CEU:1.0;1.0, CHB:0.955;0.912, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs6930436 chr6 80250309 Intergenic 7 6972 CEU:1.0;1.0, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs6915859 chr6 80207245 Intron 7 50036 CEU:1.0;1.0, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs9343918 chr6 80249304 Intergenic 7 7977 CEU:1.0;1.0, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs9359382 chr6 80225028 Intron 7 32253 CEU:1.0;1.0, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs1351959 chr6 80175846 Intergenic 7 81435 CEU:1.0;1.0, CHB:0.951;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs9352744 chr6 80217276 Intron 7 40005 CEU:1.0;1.0, CHB:0.953;0.908, JPT:1.0;0.863, YRI:1.0;0.849 FUNCTIONAL_SNP rs9294148 chr6 80208913 Intron 7 48368 CEU:1.0;1.0, CHB:0.94;0.723, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3967183 chr6 80186831 Intergenic 7 70450 CEU:1.0;1.0, CHB:1.0;0.915, JPT:1.0;1.0 FUNCTIONAL_SNP rs9341781 chr6 80238596 Intron 7 18685 CEU:1.0;1.0, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;0.849 LEAD_SNP rs346291 chr6 80564836 Intergenic 6 ASSOCIATION 20522523 Partial epilepsies 6.52287874528 SH3BGRL2 - ELOVL4 FUNCTIONAL_SNP rs346286 chr6 80562679 Intergenic 6 2157 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs346279 chr6 80559532 Intergenic 7 5304 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs346281 chr6 80560915 Intergenic 7 3921 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs16893526 chr6 82515315 Intergenic 7 ASSOCIATION 21606135 Coronary heart disease 5.30102999566 FAM46A - IBTK FUNCTIONAL_SNP rs16893614 chr6 82575463 Intron 2b 60148 CEU:1.0;1.0, CHB:0.886;0.591, JPT:1.0;0.574 FUNCTIONAL_SNP rs13197670 chr6 82569884 Intron 2b 54569 CEU:1.0;1.0, CHB:0.891;0.719, JPT:1.0;1.0, YRI:0.757;0.573 FUNCTIONAL_SNP rs1034241 chr6 82473953 Intergenic 3a 41362 CEU:1.0;0.923 FUNCTIONAL_SNP rs16893518 chr6 82499984 Intergenic 4 15331 CEU:1.0;1.0, CHB:1.0;0.694, JPT:1.0;0.897 FUNCTIONAL_SNP rs4476879 chr6 82526352 Intergenic 4 11037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6454240 chr6 82498757 Intergenic 4 16558 CEU:1.0;1.0, CHB:1.0;0.694, JPT:1.0;0.897 FUNCTIONAL_SNP rs1931646 chr6 82588292 Intron 5b 72977 CEU:1.0;1.0, CHB:0.891;0.719, JPT:1.0;0.897, YRI:0.757;0.573 FUNCTIONAL_SNP rs16893572 chr6 82547535 Intergenic 7 32220 CEU:1.0;1.0, CHB:0.785;0.617, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs1999630 chr6 82530490 Intergenic 7 15175 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.728 FUNCTIONAL_SNP rs16893491 chr6 82496625 Intergenic 7 18690 CEU:1.0;1.0, CHB:1.0;0.694, JPT:1.0;1.0 FUNCTIONAL_SNP rs194618 chr6 82470820 Intergenic 7 44495 CEU:1.0;0.906 FUNCTIONAL_SNP rs194620 chr6 82478615 Intergenic 7 36700 CEU:1.0;0.923 FUNCTIONAL_SNP rs16893523 chr6 82504179 Intergenic 7 11136 CEU:1.0;0.923, CHB:1.0;0.694, JPT:1.0;0.897, YRI:0.876;0.616 FUNCTIONAL_SNP rs16893524 chr6 82508978 Intergenic 7 6337 CEU:1.0;1.0, CHB:1.0;0.694, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13192697 chr6 82491104 Intergenic 7 24211 CEU:1.0;0.923, CHB:1.0;0.694, JPT:1.0;0.897 FUNCTIONAL_SNP rs13214556 chr6 82496789 Intergenic 7 18526 CEU:1.0;1.0, CHB:1.0;0.642, JPT:1.0;1.0 FUNCTIONAL_SNP rs11961442 chr6 82507123 Intergenic 7 8192 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;0.705 LEAD_SNP rs1577917 chr6 86691940 Intergenic 6 ASSOCIATION 20195266 Response to antipsychotic treatment 5.52287874528 SNORD50B - RPL7P27 FUNCTIONAL_SNP rs7739241 chr6 86575796 Intergenic 4 116144 CEU:0.947;0.897 FUNCTIONAL_SNP rs1857965 chr6 86630776 Intergenic 4 61164 CEU:1.0;1.0 FUNCTIONAL_SNP rs12208227 chr6 86670944 Intergenic 5a 20996 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10944169 chr6 86683036 Intergenic 5a 8904 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12190598 chr6 86686074 Intergenic 5a 5866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs1415749 chr6 86779084 Intergenic 5b 87144 CEU:1.0;0.902 FUNCTIONAL_SNP rs12199516 chr6 86726221 Intergenic 5b 34281 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10944161 chr6 86630376 Intergenic 5b 61564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12212733 chr6 86726013 Intergenic 5b 34073 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs12663690 chr6 86640162 Intergenic 6 51778 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12664335 chr6 86597774 Intergenic 6 94166 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11755048 chr6 86514334 Intergenic 6 177606 CEU:0.947;0.897, CHB:1.0;0.898, JPT:1.0;0.89 FUNCTIONAL_SNP rs2812972 chr6 86669880 Intergenic 6 22060 CEU:1.0;1.0 FUNCTIONAL_SNP rs1414199 chr6 86522370 Intergenic 6 169570 CEU:0.947;0.897 FUNCTIONAL_SNP rs1414201 chr6 86500316 Intergenic 6 191624 CEU:0.947;0.897 FUNCTIONAL_SNP rs12216074 chr6 86520002 Intergenic 6 171938 CEU:0.947;0.897 FUNCTIONAL_SNP rs1470531 chr6 86507369 Intergenic 6 184571 CEU:0.947;0.897 FUNCTIONAL_SNP rs11756621 chr6 86740063 Intergenic 6 48123 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.829 FUNCTIONAL_SNP rs13217384 chr6 86720000 Intergenic 6 28060 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12191340 chr6 86521400 Intergenic 6 170540 CEU:0.947;0.897 FUNCTIONAL_SNP rs7766645 chr6 86622238 Intergenic 6 69702 CEU:1.0;1.0 FUNCTIONAL_SNP rs10944142 chr6 86496809 Intergenic 6 195131 CEU:0.931;0.811, CHB:1.0;0.841, JPT:1.0;0.883 FUNCTIONAL_SNP rs1545376 chr6 86504582 Intergenic 6 187358 CEU:0.947;0.897 FUNCTIONAL_SNP rs10944163 chr6 86658693 Intergenic 6 33247 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13219504 chr6 86556917 Intergenic 6 135023 CEU:1.0;0.944, CHB:1.0;0.898, JPT:1.0;0.89 FUNCTIONAL_SNP rs12213431 chr6 86500956 Intergenic 6 190984 CEU:0.947;0.897 FUNCTIONAL_SNP rs12202712 chr6 86578541 Intergenic 6 113399 CEU:0.947;0.897 FUNCTIONAL_SNP rs7747824 chr6 86647106 Intergenic 6 44834 CEU:1.0;0.949 FUNCTIONAL_SNP rs6454513 chr6 86720049 Intergenic 6 28109 CEU:1.0;1.0 FUNCTIONAL_SNP rs11752180 chr6 86573165 Intergenic 6 118775 CEU:0.947;0.897 FUNCTIONAL_SNP rs1447159 chr6 86609249 Intergenic 6 82691 CEU:1.0;0.858 FUNCTIONAL_SNP rs11758849 chr6 86708262 Intergenic 6 16322 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2816815 chr6 86691656 Intergenic 6 284 CEU:1.0;1.0 FUNCTIONAL_SNP rs791856 chr6 86681841 Intergenic 6 10099 CEU:1.0;1.0 FUNCTIONAL_SNP rs2816822 chr6 86658292 Intergenic 6 33648 CEU:0.946;0.849 FUNCTIONAL_SNP rs12664634 chr6 86579414 Intergenic 6 112526 CEU:0.945;0.805 FUNCTIONAL_SNP rs955196 chr6 86729951 Intergenic 6 38011 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs34581302 chr6 86705948 Intergenic 6 14008 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1018184 chr6 86648475 Intergenic 6 43465 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2782263 chr6 86791307 Intergenic 6 99367 CEU:1.0;0.902 FUNCTIONAL_SNP rs7760207 chr6 86721700 Intergenic 6 29760 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11755864 chr6 86691791 Intergenic 6 149 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9450333 chr6 86519755 Intergenic 6 172185 CEU:0.945;0.805 FUNCTIONAL_SNP rs2324839 chr6 86536942 Intergenic 6 154998 CEU:0.947;0.897 FUNCTIONAL_SNP rs12208493 chr6 86662267 Intergenic 6 29673 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2121594 chr6 86576854 Intergenic 6 115086 CEU:0.945;0.893, CHB:1.0;0.897, JPT:1.0;0.89 FUNCTIONAL_SNP rs2166664 chr6 86596622 Intergenic 6 95318 CEU:0.946;0.849 FUNCTIONAL_SNP rs12200330 chr6 86656653 Intergenic 6 35287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10498958 chr6 86649705 Intergenic 6 42235 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10455448 chr6 86533611 Intergenic 6 158329 CEU:0.947;0.897 FUNCTIONAL_SNP rs10455449 chr6 86592226 Intergenic 6 99714 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4707239 chr6 86610717 Intergenic 6 81223 CEU:1.0;1.0 FUNCTIONAL_SNP rs1995688 chr6 86632319 Intergenic 6 59621 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11758508 chr6 86506878 Intergenic 6 185062 CEU:0.947;0.897, CHB:1.0;0.898, JPT:1.0;0.89 FUNCTIONAL_SNP rs7453105 chr6 86500761 Intergenic 6 191179 CEU:0.947;0.897 FUNCTIONAL_SNP rs4142546 chr6 86505311 Intergenic 6 186629 CEU:0.947;0.897 FUNCTIONAL_SNP rs12192992 chr6 86609915 Intergenic 6 82025 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1999852 chr6 86705738 Intergenic 6 13798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12209668 chr6 86566517 Intergenic 7 125423 CEU:0.947;0.897 FUNCTIONAL_SNP rs1857964 chr6 86635994 Intergenic 7 55946 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12196377 chr6 86566775 Intergenic 7 125165 CEU:0.947;0.897, CHB:1.0;0.898, JPT:1.0;0.89 FUNCTIONAL_SNP rs1582127 chr6 86697204 Intergenic 7 5264 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12196411 chr6 86779762 Intergenic 7 87822 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.829 FUNCTIONAL_SNP rs3857480 chr6 86535149 Intergenic 7 156791 CEU:0.947;0.896 FUNCTIONAL_SNP rs1415753 chr6 86753074 Intergenic 7 61134 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.829 FUNCTIONAL_SNP rs12213331 chr6 86504797 Intergenic 7 187143 CEU:0.947;0.896, CHB:1.0;0.898, JPT:1.0;0.89 FUNCTIONAL_SNP rs12665464 chr6 86574133 Intergenic 7 117807 CEU:0.947;0.897 FUNCTIONAL_SNP rs10944168 chr6 86680156 Intergenic 7 11784 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12198061 chr6 86550985 Intergenic 7 140955 CEU:0.944;0.845 FUNCTIONAL_SNP rs12154056 chr6 86634094 Intergenic 7 57846 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7771342 chr6 86631936 Intergenic 7 60004 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1962716 chr6 86648436 Intergenic 7 43504 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7772384 chr6 86639680 Intergenic 7 52260 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6454505 chr6 86592362 Intergenic 7 99578 CEU:1.0;0.898 FUNCTIONAL_SNP rs1447160 chr6 86546123 Intergenic 7 145817 CEU:0.946;0.849, CHB:1.0;0.517 FUNCTIONAL_SNP rs12215037 chr6 86727631 Intergenic 7 35691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13212415 chr6 86608083 Intergenic 7 83857 CEU:1.0;0.857 FUNCTIONAL_SNP rs12201735 chr6 86656939 Intergenic 7 35001 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11752223 chr6 86573394 Intergenic 7 118546 CEU:0.946;0.895 FUNCTIONAL_SNP rs7747897 chr6 86647349 Intergenic 7 44591 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs955197 chr6 86729675 Intergenic 7 37735 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0 FUNCTIONAL_SNP rs2660576 chr6 86651603 Intergenic 7 40337 CEU:1.0;1.0 FUNCTIONAL_SNP rs12663651 chr6 86701655 Intergenic 7 9715 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12199784 chr6 86726808 Intergenic 7 34868 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13213551 chr6 86608701 Intergenic 7 83239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.884 FUNCTIONAL_SNP rs6933377 chr6 86705255 Intergenic 7 13315 CEU:1.0;0.898, CHB:1.0;0.809, JPT:1.0;0.796 FUNCTIONAL_SNP rs2166663 chr6 86593896 Intergenic 7 98044 CEU:1.0;1.0 FUNCTIONAL_SNP rs12213740 chr6 86656733 Intergenic 7 35207 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12190604 chr6 86716215 Intergenic 7 24275 CEU:1.0;1.0, CHB:1.0;0.809, JPT:1.0;0.679 FUNCTIONAL_SNP rs3900313 chr6 86537154 Intergenic 7 154786 CEU:0.947;0.897 FUNCTIONAL_SNP rs12213149 chr6 86668644 Intergenic 7 23296 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12203457 chr6 86689277 Intergenic 7 2663 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2084294 chr6 86565943 Intergenic 7 125997 CEU:0.945;0.893 FUNCTIONAL_SNP rs12661204 chr6 86678586 Intergenic 7 13354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1337842 chr6 86675097 Intergenic 7 16843 CEU:1.0;0.894 FUNCTIONAL_SNP rs1337844 chr6 86677273 Intergenic 7 14667 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1337850 chr6 86729103 Intergenic 7 37163 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs16876540 chr6 86612519 Intergenic 7 79421 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.838 LEAD_SNP rs493187 chr6 87466492 Intergenic 5b ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.52287874528 RPL7P27 - HTR1E FUNCTIONAL_SNP rs671837 chr6 87410024 Intergenic 5a 56468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.865 FUNCTIONAL_SNP rs616174 chr6 87438888 Intergenic 5a 27604 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.865 FUNCTIONAL_SNP rs522975 chr6 87440123 Intergenic 5b 26369 CEU:1.0;0.922, YRI:0.938;0.599 FUNCTIONAL_SNP rs528006 chr6 87482387 Intergenic 6 15895 CEU:1.0;0.96, CHB:1.0;0.597, JPT:1.0;0.862, YRI:1.0;0.574 FUNCTIONAL_SNP rs689367 chr6 87427426 Intergenic 6 39066 CEU:1.0;0.922, YRI:1.0;0.529 FUNCTIONAL_SNP rs660238 chr6 87461341 Intergenic 6 5151 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs670510 chr6 87448174 Intergenic 6 18318 CEU:1.0;0.922 FUNCTIONAL_SNP rs650604 chr6 87397940 Intergenic 6 68552 CEU:1.0;0.904, YRI:1.0;0.599 FUNCTIONAL_SNP rs476014 chr6 87464604 Intergenic 6 1888 CEU:1.0;0.922, YRI:1.0;0.651 FUNCTIONAL_SNP rs668111 chr6 87474096 Intergenic 6 7604 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2324951 chr6 87352434 Intergenic 6 114058 CEU:0.956;0.809, CHB:1.0;1.0, JPT:1.0;0.865, YRI:1.0;0.551 FUNCTIONAL_SNP rs1954291 chr6 87352034 Intergenic 6 114458 CEU:0.956;0.809, CHB:1.0;0.909, JPT:1.0;0.865, YRI:1.0;0.68 FUNCTIONAL_SNP rs1508351 chr6 87346787 Intergenic 6 119705 CEU:0.956;0.809, CHB:1.0;1.0, JPT:1.0;0.865 FUNCTIONAL_SNP rs477732 chr6 87464431 Intergenic 7 2061 CEU:1.0;0.922, YRI:1.0;1.0 FUNCTIONAL_SNP rs499254 chr6 87424388 Intergenic 7 42104 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.865 FUNCTIONAL_SNP rs506430 chr6 87436775 Intergenic 7 29717 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.865, YRI:1.0;0.651 FUNCTIONAL_SNP rs513640 chr6 87475962 Intergenic 7 9470 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10485360 chr6 87352141 Intergenic 7 114351 CEU:0.956;0.809, CHB:1.0;1.0, JPT:1.0;0.865 FUNCTIONAL_SNP rs9344640 chr6 87383080 Intergenic 7 83412 CEU:0.956;0.809 FUNCTIONAL_SNP rs575105 chr6 87484692 Intergenic 7 18200 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.651 FUNCTIONAL_SNP rs1935597 chr6 87366519 Intergenic 7 99973 CEU:1.0;0.922, CHB:1.0;1.0, JPT:0.947;0.814, YRI:1.0;0.551 FUNCTIONAL_SNP rs1935601 chr6 87352507 Intergenic 7 113985 CEU:0.956;0.809, CHB:1.0;1.0, JPT:1.0;0.865, YRI:1.0;0.551 FUNCTIONAL_SNP rs594046 chr6 87420355 Intergenic 7 46137 CEU:0.956;0.876, YRI:1.0;0.651 FUNCTIONAL_SNP rs676124 chr6 87396819 Intergenic 7 69673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.865, YRI:1.0;0.651 FUNCTIONAL_SNP rs654118 chr6 87449564 Intergenic 7 16928 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs654559 chr6 87449488 Intergenic 7 17004 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.95;0.903 FUNCTIONAL_SNP rs628569 chr6 87457232 Intergenic 7 9260 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs641422 chr6 87423256 Intergenic 7 43236 CEU:1.0;0.922, YRI:1.0;0.557 FUNCTIONAL_SNP rs1954290 chr6 87351573 Intergenic 7 114919 CEU:0.956;0.809, CHB:1.0;0.909, JPT:1.0;0.865, YRI:1.0;0.574 FUNCTIONAL_SNP rs675248 chr6 87434853 Intergenic 7 31639 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.865 FUNCTIONAL_SNP rs679369 chr6 87467377 Intergenic 7 885 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs627668 chr6 87457452 Intergenic 7 9040 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.643 FUNCTIONAL_SNP rs2324949 chr6 87344127 Intergenic 7 122365 CEU:0.955;0.839, CHB:1.0;1.0, JPT:0.946;0.81, YRI:1.0;0.564 FUNCTIONAL_SNP rs2324950 chr6 87350271 Intergenic 7 116221 CEU:0.956;0.809, CHB:1.0;1.0, JPT:1.0;0.865 FUNCTIONAL_SNP rs503887 chr6 87479890 Intergenic 7 13398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.651 FUNCTIONAL_SNP rs529403 chr6 87439437 Intergenic 7 27055 CEU:1.0;0.922, YRI:1.0;0.647 LEAD_SNP rs1925690 chr6 87867063 Intron 7 ASSOCIATION 21116278 MRI atrophy measures 7.52287874528 ZNF292 FUNCTIONAL_SNP rs370228 chr6 88051187 Exon,non-coding 7 184124 CEU:1.0;0.906 FUNCTIONAL_SNP rs2182182 chr6 87911780 Intron 6 44717 CEU:1.0;1.0 LEAD_SNP rs2509458 chr6 88652580 Intergenic 7 ASSOCIATION 17903302 Blood pressure 5.15490195999 NCRNA00120 - SPACA1 LEAD_SNP rs366676 chr6 88717766 Intergenic 7 ASSOCIATION 17903301 Echocardiographic traits 5.69897000434 NCRNA00120 - SPACA1 LEAD_SNP rs16880441 chr6 88975977 Intergenic 7 ASSOCIATION 18846501 Conduct disorder (interaction) 5.04575749056 RPS14P9 - ACTBP8 LEAD_SNP rs10485165 chr6 89112817 Intron 7 ASSOCIATION 17903293 Select biomarker traits 6.0 ACTBP8 - RNGTT LEAD_SNP rs12527253 chr6 89293745 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 6.0 ACTBP8 - RNGTT LEAD_SNP rs12201676 chr6 89732101 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 7.39794000867 CYCSP16 - PNRC1 FUNCTIONAL_SNP rs12527359 chr6 89728221 Intergenic 5a 3880 CEU:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs10944424 chr6 89729847 Intergenic 6 2254 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12199693 chr6 89717261 Intergenic 6 14840 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.696, YRI:1.0;0.817 FUNCTIONAL_SNP rs12203806 chr6 89733352 Intergenic 6 1251 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.839 LEAD_SNP rs10806425 chr6 90926612 Intron 4 ASSOCIATION 20190752 Celiac disease 9.39794000867 BACH2 FUNCTIONAL_SNP rs3734660 chr6 90916345 Exon,non-coding 6 10267 CEU:1.0;0.844, JPT:1.0;0.731 FUNCTIONAL_SNP rs1504215 chr6 91006227 Exon,non-coding 5b 79615 CEU:1.0;0.836 FUNCTIONAL_SNP rs2021716 chr6 90941289 Intron 3a 14677 CEU:1.0;0.836 FUNCTIONAL_SNP rs11757155 chr6 90941240 Intron 3a 14628 CEU:1.0;0.836 FUNCTIONAL_SNP rs17513531 chr6 90951239 Intron 4 24627 CEU:1.0;0.832 FUNCTIONAL_SNP rs1319433 chr6 90921988 Intron 4 4624 CEU:1.0;0.844, JPT:1.0;0.731 FUNCTIONAL_SNP rs6925032 chr6 91008027 Intergenic 4 81415 CEU:1.0;0.836 FUNCTIONAL_SNP rs4997561 chr6 90908057 Intron 5a 18555 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs2064870 chr6 90903990 Intron 5b 22622 CEU:1.0;0.88, JPT:0.814;0.561 FUNCTIONAL_SNP rs2875584 chr6 90950628 Intron 6 24016 CEU:1.0;0.836 FUNCTIONAL_SNP rs17712288 chr6 90909157 Intron 6 17455 CEU:1.0;0.844, JPT:0.814;0.561 FUNCTIONAL_SNP rs1321859 chr6 91011673 Intergenic 7 85061 CEU:1.0;0.836 FUNCTIONAL_SNP rs2325291 chr6 90986686 Intron 7 60074 CEU:1.0;0.836 FUNCTIONAL_SNP rs2325292 chr6 90986749 Intron 7 60137 CEU:1.0;0.834 FUNCTIONAL_SNP rs1847472 chr6 90973159 Intron 7 46547 CEU:1.0;0.836 FUNCTIONAL_SNP rs943689 chr6 90984035 Intron 7 57423 CEU:1.0;0.836 FUNCTIONAL_SNP rs905670 chr6 90958502 Intron 7 31890 CEU:1.0;0.836 FUNCTIONAL_SNP rs766153 chr6 90905047 Intron 7 21565 CEU:1.0;0.844, JPT:0.814;0.561 FUNCTIONAL_SNP rs10944481 chr6 90917314 Intron 7 9298 CEU:1.0;0.844, JPT:1.0;0.731 LEAD_SNP rs3757247 chr6 90957463 Intron 6 ASSOCIATION 18840781 Type 1 diabetes 6.0 BACH2 LEAD_SNP rs11755527 chr6 90958231 Intron 6 ASSOCIATION 19430480 Type 1 diabetes 7.30102999566 BACH2 ASSOCIATION 18978792 Type 1 diabetes 11.3010299957 BACH2 LEAD_SNP rs1847472 chr6 90973159 Intron 7 ASSOCIATION 21102463 Crohn's disease 8.30102999566 BACH2 FUNCTIONAL_SNP rs1504215 chr6 91006227 Exon,non-coding 5b 33068 CEU:1.0;1.0 FUNCTIONAL_SNP rs2021716 chr6 90941289 Intron 3a 31870 CEU:1.0;1.0 FUNCTIONAL_SNP rs11757155 chr6 90941240 Intron 3a 31919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.612 FUNCTIONAL_SNP rs10806425 chr6 90926612 Intron 4 46547 CEU:1.0;0.836 FUNCTIONAL_SNP rs1010474 chr6 90857028 Intron 4 116131 CEU:0.954;0.909 FUNCTIONAL_SNP rs17513531 chr6 90951239 Intron 4 21920 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;0.652 FUNCTIONAL_SNP rs6925032 chr6 91008027 Intergenic 4 34868 CEU:1.0;1.0 FUNCTIONAL_SNP rs4997561 chr6 90908057 Intron 5a 65102 CEU:1.0;0.8 FUNCTIONAL_SNP rs10455168 chr6 90883525 Intron 5b 89634 CEU:1.0;0.955 FUNCTIONAL_SNP rs10806423 chr6 90886824 Intron 6 86335 CEU:1.0;0.955 FUNCTIONAL_SNP rs12199079 chr6 90852258 Intron 6 120901 CEU:0.954;0.909 FUNCTIONAL_SNP rs7774138 chr6 90866227 Intron 6 106932 CEU:1.0;0.955 FUNCTIONAL_SNP rs2875584 chr6 90950628 Intron 6 22531 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs1321859 chr6 91011673 Intergenic 7 38514 CEU:1.0;1.0 FUNCTIONAL_SNP rs17585295 chr6 90944831 Intron 7 28328 CEU:1.0;0.873, JPT:1.0;0.846 FUNCTIONAL_SNP rs4707609 chr6 90946479 Intron 7 26680 CEU:1.0;0.873, JPT:1.0;0.846 FUNCTIONAL_SNP rs2325291 chr6 90986686 Intron 7 13527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs2325292 chr6 90986749 Intron 7 13590 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs943689 chr6 90984035 Intron 7 10876 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.608 FUNCTIONAL_SNP rs905670 chr6 90958502 Intron 7 14657 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs17711850 chr6 90864870 Intron 7 108289 CEU:0.954;0.909 LEAD_SNP rs806276 chr6 91207351 Intergenic 4 ASSOCIATION 18937294 Attention deficit hyperactivity disorder (time to onset) 6.52287874528 BACH2 - MAP3K7 LEAD_SNP rs713155 chr6 91417752 Intergenic 7 ASSOCIATION 20171287 Brain structure 6.30102999566 MAP3K7 - RPL5P19 FUNCTIONAL_SNP rs13202490 chr6 91438216 Intergenic 5a 20464 CEU:1.0;0.962 FUNCTIONAL_SNP rs4706374 chr6 91405807 Intergenic 5a 11945 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs12524049 chr6 91427339 Intergenic 5a 9587 CEU:1.0;0.962, JPT:0.758;0.501 FUNCTIONAL_SNP rs1923086 chr6 91413273 Intergenic 5b 4479 CEU:1.0;1.0, CHB:1.0;0.518, JPT:1.0;0.681 FUNCTIONAL_SNP rs6909710 chr6 91407106 Intergenic 6 10646 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs4707644 chr6 91436808 Intergenic 6 19056 CEU:1.0;0.962, JPT:0.758;0.501 FUNCTIONAL_SNP rs713156 chr6 91417519 Intergenic 6 233 CEU:1.0;1.0, JPT:1.0;0.667 FUNCTIONAL_SNP rs1040776 chr6 91414594 Intergenic 7 3158 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs2325312 chr6 91417393 Intergenic 7 359 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.911;0.595 FUNCTIONAL_SNP rs9342242 chr6 91409601 Intergenic 7 8151 CEU:1.0;1.0, CHB:1.0;0.518, JPT:0.904;0.606 FUNCTIONAL_SNP rs2180626 chr6 91408834 Intergenic 7 8918 CEU:1.0;1.0, CHB:1.0;0.518, JPT:0.91;0.622 FUNCTIONAL_SNP rs6916951 chr6 91422344 Intergenic 7 4592 CEU:1.0;1.0, CHB:1.0;0.518, JPT:1.0;0.694 FUNCTIONAL_SNP rs9362770 chr6 91406809 Intergenic 7 10943 CEU:1.0;1.0, CHB:1.0;0.518, JPT:0.91;0.622 LEAD_SNP rs2506933 chr6 93615450 Intergenic 6 ASSOCIATION 20125193 Cognitive test performance 5.22184874962 ATF1P1 - COPS5P FUNCTIONAL_SNP rs2485819 chr6 93615361 Intergenic 6 89 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.916 LEAD_SNP rs594442 chr6 93847884 Intergenic 6 ASSOCIATION 21546767 Dialysis-related mortality 6.0 COPS5P - EPHA7 FUNCTIONAL_SNP rs532830 chr6 93851245 Intergenic 5b 3361 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1408282 chr6 93852252 Intergenic 7 ASSOCIATION 21647738 C-reactive protein 6.0 COPS5P - EPHA7 LEAD_SNP rs6909430 chr6 98739774 Intergenic 7 ASSOCIATION 19197348 Quantitative traits 5.09691001301 C6orf167 - POU3F2 FUNCTIONAL_SNP rs9482508 chr6 98685769 Intergenic 6 54005 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.935, YRI:1.0;0.866 FUNCTIONAL_SNP rs9388294 chr6 98670458 Intergenic 6 69316 CEU:1.0;1.0, CHB:1.0;0.933, JPT:0.931;0.867, YRI:1.0;0.873 FUNCTIONAL_SNP rs7770988 chr6 98737183 Intergenic 6 2591 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.944;0.804 FUNCTIONAL_SNP rs9320980 chr6 98685930 Intergenic 7 53844 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.935, YRI:1.0;0.883 FUNCTIONAL_SNP rs1466612 chr6 98684466 Intergenic 7 55308 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.935, YRI:1.0;0.88 FUNCTIONAL_SNP rs9401724 chr6 98687596 Intergenic 7 52178 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.935, YRI:1.0;0.883 LEAD_SNP rs9491640 chr6 98919264 Intergenic 7 ASSOCIATION 19023125 Brain imaging in schizophrenia (interaction) 5.04575749056 C6orf167 - POU3F2 LEAD_SNP rs2132683 chr6 99672014 Intergenic 7 ASSOCIATION 20171287 Brain structure 6.0 BDH2P1 - C6orf168 FUNCTIONAL_SNP rs9483633 chr6 99668620 Intergenic 6 3394 CEU:1.0;0.952, CHB:0.951;0.864, JPT:1.0;0.908, YRI:0.961;0.859 LEAD_SNP rs4840086 chr6 100208438 Intergenic 7 ASSOCIATION 21102462 Menarche (age at onset) 7.69897000434 PRDM13 - MCHR2 FUNCTIONAL_SNP rs2894891 chr6 100209907 Intergenic 5a 1469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4240583 chr6 100201595 Intergenic 6 6843 CEU:0.962;0.892, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs11969653 chr6 100203210 Intergenic 6 5228 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4840082 chr6 100199897 Intergenic 7 8541 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4840083 chr6 100200199 Intergenic 7 8239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4840084 chr6 100202969 Intergenic 7 5469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6902345 chr6 100199777 Intergenic 7 8661 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9389666 chr6 100194606 Intergenic 7 13832 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10485227 chr6 100207327 Intergenic 7 1111 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2841307 chr6 100756687 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.0 MCHR2 - SIM1 FUNCTIONAL_SNP rs10499029 chr6 100744264 Intergenic 4 12423 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9321981 chr6 100732279 Intergenic 4 24408 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.833 FUNCTIONAL_SNP rs9496859 chr6 100682540 Intergenic 5a 74147 CEU:1.0;1.0, CHB:1.0;0.894, JPT:1.0;0.908 FUNCTIONAL_SNP rs9496865 chr6 100684801 Intergenic 5b 71886 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;0.91 FUNCTIONAL_SNP rs2939370 chr6 100748939 Intergenic 5b 7748 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.511 FUNCTIONAL_SNP rs4131342 chr6 100739587 Intergenic 6 17100 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.794 FUNCTIONAL_SNP rs1506088 chr6 100754266 Intergenic 6 2421 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.511 FUNCTIONAL_SNP rs4840124 chr6 100729007 Intergenic 6 27680 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.833 FUNCTIONAL_SNP rs9321985 chr6 100738842 Intergenic 7 17845 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.833 FUNCTIONAL_SNP rs4131343 chr6 100739830 Intergenic 7 16857 CEU:1.0;0.922 FUNCTIONAL_SNP rs9496988 chr6 100723680 Intergenic 7 33007 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.833 FUNCTIONAL_SNP rs1506087 chr6 100754239 Intergenic 7 2448 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.509 FUNCTIONAL_SNP rs9496882 chr6 100688210 Intergenic 7 68477 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.915 FUNCTIONAL_SNP rs4840123 chr6 100712304 Intergenic 7 44383 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.833 FUNCTIONAL_SNP rs4140483 chr6 100693008 Intergenic 7 63679 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.915 FUNCTIONAL_SNP rs3934920 chr6 100740293 Intergenic 7 16394 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.833, YRI:0.871;0.529 FUNCTIONAL_SNP rs9497034 chr6 100737712 Intergenic 7 18975 CEU:0.904;0.818, CHB:1.0;0.904, JPT:1.0;0.833 FUNCTIONAL_SNP rs6915041 chr6 100736169 Intergenic 7 20518 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.819 LEAD_SNP rs12207601 chr6 102355867 Intron 7 ASSOCIATION 19260141 Biochemical measures 5.69897000434 GRIK2 LEAD_SNP rs4520040 chr6 104432165 Intergenic 5a ASSOCIATION 21348951 Cardiac hypertrophy 5.52287874528 GRIK2 - NPM1P10 FUNCTIONAL_SNP rs10484272 chr6 104435356 Intergenic 6 3191 CEU:1.0;1.0, CHB:0.948;0.855, JPT:1.0;0.947 FUNCTIONAL_SNP rs4946133 chr6 104435635 Intergenic 6 3470 CEU:1.0;1.0 LEAD_SNP rs9377619 chr6 104593867 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.69897000434 NPM1P10 - HACE1 FUNCTIONAL_SNP rs2744206 chr6 104649619 Intergenic 2c 55752 CEU:1.0;0.936, CHB:0.914;0.835, JPT:1.0;0.877 FUNCTIONAL_SNP rs13216520 chr6 104562342 Intergenic 6 31525 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1158956 chr6 104654028 Intergenic 7 60161 CEU:1.0;0.936, CHB:0.914;0.835, JPT:1.0;0.877 FUNCTIONAL_SNP rs9399874 chr6 104579138 Intergenic 7 14729 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9322817 chr6 105232233 Intron 7 ASSOCIATION 17903292 Thyroid stimulating hormone 5.15490195999 HACE1 FUNCTIONAL_SNP rs6900902 chr6 105235757 Intron 6 3524 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7759938 chr6 105378954 Intergenic 7 ASSOCIATION 21102462 Menarche (age at onset) 59.3010299957 HACE1 - LIN28B ASSOCIATION 19448620 Menarche (age at onset) 8.15490195999 HACE1 - LIN28B FUNCTIONAL_SNP rs369065 chr6 105444058 Intron 4 65104 CEU:1.0;1.0, CHB:1.0;0.587, JPT:1.0;0.844 FUNCTIONAL_SNP rs314268 chr6 105417978 Intron 5a 39024 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs314263 chr6 105392745 Intergenic 5b 13791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs314273 chr6 105461882 Intron 6 82928 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs314276 chr6 105407999 Intron 6 29045 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs395962 chr6 105397418 Intergenic 6 18464 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9391253 chr6 105367616 Intergenic 7 11338 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs314274 chr6 105412932 Intron 7 33978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs314286 chr6 105436053 Intron 7 57099 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2095812 chr6 105383978 Intergenic 7 5024 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs167539 chr6 105410048 Intron 7 31094 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs314280 chr6 105400837 Intergenic 4 ASSOCIATION 19448622 Menarche (age at onset) 13.6989700043 LOC100129852 FUNCTIONAL_SNP rs1475120 chr6 105389953 Intergenic 3a 10884 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.892 FUNCTIONAL_SNP rs12200251 chr6 105382415 Intergenic 5a 18422 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.892, YRI:1.0;1.0 FUNCTIONAL_SNP rs314270 chr6 105462876 Intron 6 62039 CEU:1.0;0.811, CHB:1.0;1.0, JPT:1.0;0.892, YRI:1.0;0.787 FUNCTIONAL_SNP rs1744206 chr6 105423931 Intron 6 23094 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;0.889, YRI:1.0;1.0 FUNCTIONAL_SNP rs364663 chr6 105443189 Intron 6 42352 CEU:1.0;0.821, CHB:0.932;0.868, JPT:0.94;0.836, YRI:1.0;0.931 FUNCTIONAL_SNP rs314262 chr6 105394621 Intergenic 7 6216 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.892, YRI:1.0;0.931 FUNCTIONAL_SNP rs314266 chr6 105421317 Intron 7 20480 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;0.892 FUNCTIONAL_SNP rs314272 chr6 105462004 Intron 7 61167 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;0.892, YRI:1.0;0.787 FUNCTIONAL_SNP rs4946651 chr6 105369510 Intergenic 7 31327 CEU:1.0;0.961, CHB:1.0;0.933, JPT:0.877;0.727, YRI:1.0;1.0 FUNCTIONAL_SNP rs454568 chr6 105442637 Intron 7 41800 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;0.892 FUNCTIONAL_SNP rs7750572 chr6 105349593 Intergenic 7 51244 CEU:0.956;0.81, YRI:0.749;0.518 FUNCTIONAL_SNP rs314289 chr6 105430934 Intron 7 30097 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;0.892, YRI:1.0;1.0 FUNCTIONAL_SNP rs314291 chr6 105424901 Intron 7 24064 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;0.892 FUNCTIONAL_SNP rs11156429 chr6 105364421 Intergenic 7 36416 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.892, YRI:1.0;1.0 LEAD_SNP rs314277 chr6 105407662 Intron 6 ASSOCIATION 20303062 Digit length ratio 5.69897000434 LIN28B ASSOCIATION 19448621 Menarche and menopause (age at onset) 12.5228787453 LIN28B ASSOCIATION 18391950 Height 8.0 LIN28B LEAD_SNP rs314276 chr6 105407999 Intron 6 ASSOCIATION 19448623 Menarche (age at onset) 15.3979400087 LIN28B FUNCTIONAL_SNP rs314268 chr6 105417978 Intron 5a 9979 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs314273 chr6 105461882 Intron 6 53883 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.816 FUNCTIONAL_SNP rs314274 chr6 105412932 Intron 7 4933 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.815 FUNCTIONAL_SNP rs167539 chr6 105410048 Intron 7 2049 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.889 LEAD_SNP rs314268 chr6 105417978 Intron 5a ASSOCIATION 18391951 Height 6.09691001301 LIN28B FUNCTIONAL_SNP rs314276 chr6 105407999 Intron 6 9979 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs167539 chr6 105410048 Intron 7 7930 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11962089 chr6 105612220 Intron 6 ASSOCIATION 21654844 Multiple sclerosis 5.09691001301 POPDC3 FUNCTIONAL_SNP rs221652 chr6 105546452 Exon,non-coding 7 65768 CEU:1.0;0.868 FUNCTIONAL_SNP rs9399904 chr6 105622521 Intron 4 10301 CEU:1.0;0.868 FUNCTIONAL_SNP rs1190298 chr6 105618468 Intron 5b 6248 CEU:1.0;0.868 FUNCTIONAL_SNP rs9500032 chr6 105566414 Intron 6 45806 CEU:1.0;0.868 FUNCTIONAL_SNP rs9500028 chr6 105543946 Intergenic 6 68274 CEU:1.0;1.0, JPT:0.811;0.557 FUNCTIONAL_SNP rs1190293 chr6 105615283 Intron 6 3063 CEU:1.0;0.854 FUNCTIONAL_SNP rs1190278 chr6 105598184 Intron 7 14036 CEU:1.0;0.868 FUNCTIONAL_SNP rs1190286 chr6 105610946 Intron 7 1274 CEU:1.0;0.868 FUNCTIONAL_SNP rs1190294 chr6 105615303 Intron 7 3083 CEU:1.0;1.0 FUNCTIONAL_SNP rs1190295 chr6 105615994 Intron 7 3774 CEU:1.0;0.868 FUNCTIONAL_SNP rs9391267 chr6 105565251 Intron 7 46969 CEU:1.0;0.845 FUNCTIONAL_SNP rs9404598 chr6 105556514 Intron 7 55706 CEU:1.0;0.868 FUNCTIONAL_SNP rs9500044 chr6 105608979 Intron 7 3241 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs6571221 chr6 105621189 Intron 7 8969 CEU:1.0;1.0, CHB:1.0;0.741, YRI:1.0;0.74 FUNCTIONAL_SNP rs2001119 chr6 105562120 Intron 7 50100 CEU:1.0;0.868 FUNCTIONAL_SNP rs12529519 chr6 105543354 Intergenic 7 68866 CEU:1.0;1.0, JPT:0.838;0.606 FUNCTIONAL_SNP rs7738109 chr6 105610727 Intron 7 1493 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.795 LEAD_SNP rs9386463 chr6 106094057 Intergenic 6 ASSOCIATION 20195514 Primary tooth development (time to first tooth eruption) 6.22184874962 RPL35P3 - PRDM1 FUNCTIONAL_SNP rs9398038 chr6 106103020 Intergenic 7 8963 CEU:1.0;0.887, CHB:1.0;0.92, JPT:1.0;1.0, YRI:0.906;0.822 LEAD_SNP rs7746082 chr6 106435269 Intergenic 7 ASSOCIATION 18587394 Crohn's disease 9.69897000434 RPL35P3 - PRDM1 LEAD_SNP rs6911490 chr6 106522027 Intergenic 7 ASSOCIATION 21297633 Ulcerative colitis 8.0 RPL35P3 - PRDM1 FUNCTIONAL_SNP rs6903235 chr6 106511888 Intergenic 7 10139 CEU:1.0;0.842 LEAD_SNP rs548234 chr6 106568034 Intergenic 5b ASSOCIATION 19838193 Systemic lupus erythematosus 11.3010299957 LOC100287304 FUNCTIONAL_SNP rs526531 chr6 106570056 Intergenic 6 2022 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6568433 chr6 106829537 Intron 4 ASSOCIATION 20834067 Longevity 6.0 ATG5 - AIM1 LEAD_SNP rs1417352 chr6 106899226 Intron 7 ASSOCIATION 17903293 Select biomarker traits 5.69897000434 ATG5 - AIM1 LEAD_SNP rs783396 chr6 106987370 Coding 7 ASSOCIATION 17434096 Stroke 5.04575749056 AIM1 LEAD_SNP rs17069122 chr6 108323759 Intergenic 4 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.0 RPL23AP50 - RPL3P7 FUNCTIONAL_SNP rs6900084 chr6 108323121 Intergenic 4 638 CEU:1.0;1.0, CHB:0.821;0.507 FUNCTIONAL_SNP rs17069127 chr6 108323804 Intergenic 4 45 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9400169 chr6 108305411 Intergenic 7 18348 CEU:1.0;1.0, JPT:1.0;0.575 LEAD_SNP rs9480865 chr6 108916573 Intron 6 ASSOCIATION 19010793 Normalized brain volume 5.15490195999 FOXO3 FUNCTIONAL_SNP rs7753734 chr6 108927841 Intron 4 11268 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.917 FUNCTIONAL_SNP rs9486902 chr6 108878052 Intergenic 5b 38521 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs9486901 chr6 108876099 Intergenic 6 40474 CEU:1.0;0.937, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.912 LEAD_SNP rs2153960 chr6 108988184 Intron 4 ASSOCIATION 21216879 Insulin-like growth factors 6.30102999566 FOXO3 FUNCTIONAL_SNP rs9400239 chr6 108977663 Exon,non-coding 4 10521 CEU:0.953;0.908, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4946936 chr6 109003321 Exon,non-coding 7 15137 CEU:1.0;1.0, CHB:1.0;0.857, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs1935952 chr6 108998905 Intron 2b 10721 CEU:1.0;1.0, CHB:1.0;0.857, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs1268162 chr6 109009194 Intergenic 3a 21010 CEU:1.0;0.875, CHB:0.846;0.666, JPT:0.928;0.862, YRI:1.0;1.0 FUNCTIONAL_SNP rs1268165 chr6 109008378 Intergenic 3a 20194 CEU:1.0;0.875, CHB:0.846;0.666, JPT:0.928;0.862 FUNCTIONAL_SNP rs9398172 chr6 108994826 Intron 4 6642 CEU:1.0;1.0, CHB:1.0;0.857, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs1268164 chr6 109008416 Intergenic 4 20232 CEU:1.0;0.875, CHB:0.846;0.666, JPT:0.928;0.862 FUNCTIONAL_SNP rs1268166 chr6 109008232 Intergenic 4 20048 CEU:1.0;0.914, CHB:0.846;0.666, JPT:0.928;0.862 FUNCTIONAL_SNP rs1268171 chr6 109007304 Intergenic 4 19120 CEU:1.0;0.875, CHB:0.846;0.666, JPT:0.928;0.862 FUNCTIONAL_SNP rs1935949 chr6 108999287 Intron 4 11103 CEU:1.0;1.0, CHB:1.0;0.857, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs1268174 chr6 109018859 Intergenic 4 30675 CEU:1.0;0.86, CHB:0.839;0.653, JPT:1.0;0.93 FUNCTIONAL_SNP rs1268167 chr6 109008183 Intergenic 5a 19999 CEU:1.0;0.875, CHB:0.846;0.666, JPT:0.928;0.862 FUNCTIONAL_SNP rs1268169 chr6 109007977 Intergenic 5b 19793 CEU:1.0;0.875, CHB:0.846;0.666, JPT:0.928;0.862 FUNCTIONAL_SNP rs1268170 chr6 109007522 Intergenic 5b 19338 CEU:1.0;0.875, CHB:0.846;0.666, JPT:0.928;0.862 FUNCTIONAL_SNP rs13217795 chr6 108974098 Intron 6 14086 CEU:0.954;0.911, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9398171 chr6 108983527 Intron 6 4657 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1268178 chr6 109017284 Intergenic 6 29100 CEU:0.953;0.83, CHB:0.895;0.666, JPT:1.0;0.923 FUNCTIONAL_SNP rs4946935 chr6 109000742 Intron 6 12558 CEU:1.0;0.955, CHB:1.0;0.857, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs3800229 chr6 108996963 Intron 7 8779 CEU:1.0;1.0, CHB:1.0;0.857, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs2022464 chr6 108945370 Intron 7 42814 CEU:0.954;0.91, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1268179 chr6 109017237 Intergenic 7 29053 CEU:0.953;0.83, CHB:0.808;0.597, JPT:1.0;0.923 FUNCTIONAL_SNP rs10457180 chr6 108965039 Intron 7 23145 CEU:0.954;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2207731 chr6 109013664 Intergenic 7 25480 CEU:1.0;0.875, CHB:0.846;0.666, JPT:0.928;0.862 FUNCTIONAL_SNP rs4946932 chr6 108974746 Intron 7 13438 CEU:0.954;0.911, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1159806 chr6 109006838 Intergenic 7 18654 CEU:1.0;0.875, CHB:0.846;0.666, JPT:0.928;0.861 LEAD_SNP rs9374080 chr6 109616420 Intergenic 2b ASSOCIATION 19862010 Mean corpuscular volume 9.39794000867 CCDC162 FUNCTIONAL_SNP rs1521908 chr6 109613986 Intergenic 4 2434 CEU:1.0;0.883 FUNCTIONAL_SNP rs6919423 chr6 109558471 Intron 4 57949 CEU:0.955;0.838, CHB:1.0;0.646 FUNCTIONAL_SNP rs11153168 chr6 109629420 Intergenic 4 13000 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.916;0.839 FUNCTIONAL_SNP rs7748918 chr6 109613564 Intergenic 4 2856 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs9400269 chr6 109606065 Intergenic 4 10355 CEU:1.0;0.883 FUNCTIONAL_SNP rs1008084 chr6 109626965 Intergenic 4 10545 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.846 FUNCTIONAL_SNP rs351725 chr6 109547939 Intergenic 4 68481 CEU:0.955;0.838 FUNCTIONAL_SNP rs4601178 chr6 109611246 Intergenic 5a 5174 CEU:1.0;0.883 FUNCTIONAL_SNP rs6924815 chr6 109612344 Intergenic 5b 4076 CEU:1.0;0.881 FUNCTIONAL_SNP rs6568571 chr6 109613252 Intergenic 5b 3168 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.874;0.733 FUNCTIONAL_SNP rs9487048 chr6 109615603 Intergenic 5b 817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs9487034 chr6 109605899 Intergenic 5b 10521 CEU:1.0;0.883 FUNCTIONAL_SNP rs11153166 chr6 109622494 Intergenic 5b 6074 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;0.96 FUNCTIONAL_SNP rs13196590 chr6 109561918 Intron 5b 54502 CEU:1.0;0.842, CHB:1.0;0.646 FUNCTIONAL_SNP rs1111863 chr6 109611206 Intergenic 5b 5214 CEU:1.0;0.883 FUNCTIONAL_SNP rs1111865 chr6 109610863 Intergenic 5b 5557 CEU:1.0;0.883 FUNCTIONAL_SNP rs1111866 chr6 109610846 Intergenic 5b 5574 CEU:1.0;0.883 FUNCTIONAL_SNP rs13196219 chr6 109635787 Intergenic 5b 19367 CEU:1.0;0.841, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9400272 chr6 109616762 Intergenic 5b 342 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs9400273 chr6 109632799 Intergenic 5b 16379 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.911;0.795 FUNCTIONAL_SNP rs351724 chr6 109546577 Intergenic 5b 69843 CEU:0.955;0.838 FUNCTIONAL_SNP rs11966072 chr6 109634828 Intergenic 6 18408 CEU:1.0;0.842, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9487033 chr6 109605388 Intergenic 6 11032 CEU:1.0;0.883 FUNCTIONAL_SNP rs11153165 chr6 109622159 Intergenic 6 5739 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs11153167 chr6 109622582 Intergenic 6 6162 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.882 FUNCTIONAL_SNP rs9386790 chr6 109608460 Intergenic 6 7960 CEU:1.0;0.883 FUNCTIONAL_SNP rs9386796 chr6 109618704 Intergenic 6 2284 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs932223 chr6 109586656 Intron 6 29764 CEU:0.956;0.842 FUNCTIONAL_SNP rs351728 chr6 109549099 Intergenic 6 67321 CEU:0.955;0.838, CHB:1.0;0.646 FUNCTIONAL_SNP rs7772602 chr6 109608661 Intergenic 6 7759 CEU:1.0;0.883 FUNCTIONAL_SNP rs9487036 chr6 109607449 Intergenic 7 8971 CEU:0.952;0.827 FUNCTIONAL_SNP rs9480922 chr6 109607211 Intergenic 7 9209 CEU:1.0;0.881 FUNCTIONAL_SNP rs9480923 chr6 109607369 Intergenic 7 9051 CEU:1.0;0.883 FUNCTIONAL_SNP rs9386791 chr6 109608497 Intergenic 7 7923 CEU:1.0;0.834 FUNCTIONAL_SNP rs7773490 chr6 109623048 Intergenic 7 6628 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.877 FUNCTIONAL_SNP rs1341271 chr6 109617542 Intergenic 7 1122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9374081 chr6 109631782 Intergenic 7 15362 CEU:1.0;0.835, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9400271 chr6 109607556 Intergenic 7 8864 CEU:1.0;0.878 FUNCTIONAL_SNP rs13200047 chr6 109633244 Intergenic 7 16824 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.918;0.843 LEAD_SNP rs11966072 chr6 109634828 Intergenic 6 ASSOCIATION 20139978 Hematological and biochemical traits 8.15490195999 CCDC162 ASSOCIATION 20139978 Hematological and biochemical traits 8.0 CCDC162 FUNCTIONAL_SNP rs13196219 chr6 109635787 Intergenic 5b 959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9374081 chr6 109631782 Intergenic 7 3046 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9487094 chr6 109742015 Intron 5b ASSOCIATION 18391951 Height 5.39794000867 PPIL6 FUNCTIONAL_SNP rs9480953 chr6 109739144 Intron 5a 2871 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9320287 chr6 109744690 Intron 6 2675 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17070580 chr6 109738714 Intron 6 3301 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9400317 chr6 110007647 Intron 6 ASSOCIATION 19684573 Response to hepatitis C treatment 5.15490195999 AKD1 LEAD_SNP rs4947019 chr6 110090049 Intron 4 ASSOCIATION 19820697 Hematological parameters 5.09691001301 FIG4 FUNCTIONAL_SNP rs12192279 chr6 110055313 Intron 6 34736 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942, YRI:1.0;1.0 FUNCTIONAL_SNP rs4947015 chr6 110052515 Intron 7 37534 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942, YRI:1.0;1.0 FUNCTIONAL_SNP rs12206574 chr6 110067773 Intron 7 22276 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;1.0 LEAD_SNP rs240993 chr6 111673714 Intron 6 ASSOCIATION 20953190 Psoriasis 19.3010299957 REV3L FUNCTIONAL_SNP rs11153279 chr6 111587266 Coding 2a 86448 CEU:1.0;0.893, CHB:1.0;0.83, JPT:0.9;0.771 FUNCTIONAL_SNP rs7742724 chr6 111839019 Intergenic 7 165305 CEU:1.0;0.8, CHB:1.0;0.95, JPT:1.0;1.0 LEAD_SNP rs33980500 chr6 111913262 Coding 5b ASSOCIATION 20953188 Psoriasis 16.0 TRAF3IP2 ASSOCIATION 20953186 Psoriatic arthritis 20.0 TRAF3IP2 LEAD_SNP rs9488363 chr6 114591986 Intron 6 ASSOCIATION 20395239 Optic disc size (rim) 5.69897000434 RPSAP43 - FRK FUNCTIONAL_SNP rs9400705 chr6 114561146 Intron 7 30840 CEU:1.0;0.924, CHB:0.901;0.775, JPT:0.899;0.771 FUNCTIONAL_SNP rs2139413 chr6 114573706 Intron 7 18280 CEU:1.0;0.924, CHB:0.949;0.821, JPT:0.948;0.817 FUNCTIONAL_SNP rs9320489 chr6 114561617 Intron 7 30369 CEU:1.0;0.923, CHB:0.948;0.817, JPT:0.948;0.817 FUNCTIONAL_SNP rs2181436 chr6 114571301 Intron 7 20685 CEU:1.0;0.915 FUNCTIONAL_SNP rs6901066 chr6 114581284 Intron 7 10702 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.653 FUNCTIONAL_SNP rs796768 chr6 114598314 Intron 7 6328 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.596 FUNCTIONAL_SNP rs785126 chr6 114597657 Intron 7 5671 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.827 FUNCTIONAL_SNP rs9488359 chr6 114584142 Intron 7 7844 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.827 FUNCTIONAL_SNP rs1337328 chr6 114598993 Intron 7 7007 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;0.907, YRI:1.0;0.791 LEAD_SNP rs1999930 chr6 116387134 Intergenic 6 ASSOCIATION 21665990 Age-related macular degeneration 8.0 TPI1P3 - NT5DC1 FUNCTIONAL_SNP rs1890425 chr6 116339295 Intron 2b 47839 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12193974 chr6 116542500 Intron 3a 155366 CEU:0.908;0.825, YRI:1.0;1.0 FUNCTIONAL_SNP rs4628134 chr6 116360141 Intron 5a 26993 CEU:1.0;1.0 FUNCTIONAL_SNP rs1931897 chr6 116440007 Intron 5b 52873 CEU:1.0;0.911 FUNCTIONAL_SNP rs4415182 chr6 116382811 Intergenic 5b 4323 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12193094 chr6 116540395 Intron 5b 153261 CEU:0.949;0.856 FUNCTIONAL_SNP rs9488841 chr6 116437915 Intron 5b 50781 CEU:1.0;0.911 FUNCTIONAL_SNP rs13213124 chr6 116335637 Intron 6 51497 CEU:1.0;1.0 FUNCTIONAL_SNP rs13192924 chr6 116352332 Intron 6 34802 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9488842 chr6 116444168 Intron 6 57034 CEU:1.0;0.902 FUNCTIONAL_SNP rs9488843 chr6 116447356 Intron 6 60222 CEU:1.0;0.911 FUNCTIONAL_SNP rs12210252 chr6 116477493 Intron 7 90359 CEU:1.0;0.911 FUNCTIONAL_SNP rs2145357 chr6 116451442 Intron 7 64308 CEU:1.0;0.911 FUNCTIONAL_SNP rs12203127 chr6 116468315 Intron 7 81181 CEU:1.0;0.911 FUNCTIONAL_SNP rs17772211 chr6 116438362 Intron 7 51228 CEU:1.0;0.911 FUNCTIONAL_SNP rs12196141 chr6 116489550 Intron 7 102416 CEU:1.0;0.911 FUNCTIONAL_SNP rs12214665 chr6 116466990 Intron 7 79856 CEU:1.0;0.911 FUNCTIONAL_SNP rs13216178 chr6 116392629 Intergenic 7 5495 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs654128 chr6 117086378 Coding 5b ASSOCIATION 21460395 Telomere length 5.52287874528 FAM162B FUNCTIONAL_SNP rs339329 chr6 117208926 Intron 5a 122548 CEU:1.0;0.847, CHB:1.0;0.846, JPT:1.0;1.0, YRI:1.0;0.849 LEAD_SNP rs6901250 chr6 117114025 Coding 5a ASSOCIATION 21300955 C-reactive protein 7.30102999566 GPRC6A FUNCTIONAL_SNP rs615199 chr6 117113653 Coding 6 372 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.711 FUNCTIONAL_SNP rs6924002 chr6 117114223 Coding 4 198 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7760125 chr6 117123391 Intron 4 9366 CEU:1.0;0.828, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2175622 chr6 117149667 Intron 5a 35642 CEU:1.0;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs339313 chr6 117179501 Intergenic 5a 65476 CEU:1.0;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.766 FUNCTIONAL_SNP rs1606366 chr6 117132438 Intron 6 18413 CEU:1.0;0.829, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs993394 chr6 117117143 Intron 6 3118 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs339361 chr6 117162515 Intergenic 7 48490 CEU:1.0;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.711 FUNCTIONAL_SNP rs339362 chr6 117165370 Intergenic 7 51345 CEU:1.0;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.766 FUNCTIONAL_SNP rs6938235 chr6 117147946 Intron 7 33921 CEU:1.0;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.711 FUNCTIONAL_SNP rs9374623 chr6 117127312 Intron 7 13287 CEU:1.0;0.829, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7740481 chr6 117149307 Intron 7 35282 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs339324 chr6 117195024 Intergenic 7 80999 CEU:1.0;0.831, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.656 LEAD_SNP rs339331 chr6 117210052 Intron 2b ASSOCIATION 20676098 Prostate cancer 11.6989700043 RFX6 FUNCTIONAL_SNP rs339326 chr6 117206395 Intron 6 3657 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs339334 chr6 117212689 Intron 7 2637 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs339340 chr6 117215114 Intron 7 5062 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs339344 chr6 117217950 Intron 7 7898 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.85 LEAD_SNP rs281868 chr6 118574061 Intron 6 ASSOCIATION 20639392 Resting heart rate 9.39794000867 SLC35F1 FUNCTIONAL_SNP rs7749263 chr6 118566250 Intron 6 7811 CEU:1.0;0.961, CHB:1.0;0.878, JPT:1.0;0.57, YRI:1.0;0.581 FUNCTIONAL_SNP rs9401060 chr6 118561348 Intron 6 12713 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.846;0.69 FUNCTIONAL_SNP rs6927800 chr6 118604122 Intron 6 30061 CEU:0.959;0.92, CHB:1.0;0.878, JPT:1.0;0.57, YRI:1.0;0.581 FUNCTIONAL_SNP rs283077 chr6 118569679 Intron 6 4382 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.694 FUNCTIONAL_SNP rs7452622 chr6 118598297 Intron 6 24236 CEU:0.951;0.823, CHB:1.0;0.866, JPT:1.0;0.568 FUNCTIONAL_SNP rs89107 chr6 118578043 Intron 7 3982 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9489327 chr6 118561889 Intron 7 12172 CEU:0.96;0.922, CHB:1.0;0.878, JPT:1.0;0.805, YRI:1.0;0.684 FUNCTIONAL_SNP rs731695 chr6 118588490 Intron 7 14429 CEU:0.96;0.922, CHB:1.0;0.878, JPT:1.0;0.57, YRI:1.0;0.557 FUNCTIONAL_SNP rs927348 chr6 118592107 Intron 7 18046 CEU:1.0;0.96, CHB:1.0;0.878, JPT:1.0;0.57, YRI:1.0;0.581 FUNCTIONAL_SNP rs6912208 chr6 118566516 Intron 7 7545 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.69 FUNCTIONAL_SNP rs11758375 chr6 118603770 Intron 7 29709 CEU:0.96;0.922, CHB:1.0;0.878, JPT:1.0;0.57, YRI:1.0;0.581 FUNCTIONAL_SNP rs4946333 chr6 118565665 Intron 7 8396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.556 LEAD_SNP rs89107 chr6 118578043 Intron 7 ASSOCIATION 19584346 Cardiac structure and function 9.0 SLC35F1 FUNCTIONAL_SNP rs7749263 chr6 118566250 Intron 6 11793 CEU:1.0;0.963, CHB:1.0;0.879, JPT:1.0;0.589, YRI:1.0;0.566 FUNCTIONAL_SNP rs7452622 chr6 118598297 Intron 6 20254 CEU:0.954;0.835, CHB:1.0;0.868, JPT:1.0;0.588 FUNCTIONAL_SNP rs9401060 chr6 118561348 Intron 6 16695 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.846;0.69 FUNCTIONAL_SNP rs281868 chr6 118574061 Intron 6 3982 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6927800 chr6 118604122 Intron 6 26079 CEU:0.962;0.925, CHB:1.0;0.879, JPT:1.0;0.589, YRI:1.0;0.566 FUNCTIONAL_SNP rs283077 chr6 118569679 Intron 6 8364 CEU:1.0;0.963, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.716 FUNCTIONAL_SNP rs9489327 chr6 118561889 Intron 7 16154 CEU:0.963;0.927, CHB:1.0;0.879, JPT:1.0;0.814, YRI:1.0;0.683 FUNCTIONAL_SNP rs731695 chr6 118588490 Intron 7 10447 CEU:0.96;0.922, CHB:1.0;0.878, JPT:1.0;0.57, YRI:1.0;0.557 FUNCTIONAL_SNP rs927348 chr6 118592107 Intron 7 14064 CEU:1.0;0.963, CHB:1.0;0.879, JPT:1.0;0.589, YRI:1.0;0.566 FUNCTIONAL_SNP rs6912208 chr6 118566516 Intron 7 11527 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.712 FUNCTIONAL_SNP rs11758375 chr6 118603770 Intron 7 25727 CEU:0.96;0.922, CHB:1.0;0.878, JPT:1.0;0.57, YRI:1.0;0.581 FUNCTIONAL_SNP rs4946333 chr6 118565665 Intron 7 12378 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.556 LEAD_SNP rs12210810 chr6 118653204 Intergenic 7 ASSOCIATION 19305409 QT interval 16.6989700043 RPL29P4 - C6orf204 LEAD_SNP rs11153730 chr6 118667522 Intergenic 6 ASSOCIATION 21076409 Ventricular conduction 18.0 RPL29P4 - C6orf204 ASSOCIATION 19587794 QT interval 28.6989700043 RPL29P4 - C6orf204 FUNCTIONAL_SNP rs12661338 chr6 118794690 Intron 5a 127168 CEU:1.0;0.893, CHB:0.847;0.588, JPT:1.0;0.724 FUNCTIONAL_SNP rs17825393 chr6 118772583 Intergenic 6 105061 CEU:1.0;0.923, CHB:0.844;0.582, JPT:1.0;0.753 FUNCTIONAL_SNP rs17226667 chr6 118721628 Intergenic 6 54106 CEU:1.0;0.891, CHB:0.845;0.585, JPT:1.0;0.724 FUNCTIONAL_SNP rs11752626 chr6 118788652 Intron 7 121130 CEU:1.0;0.893, CHB:0.847;0.588, JPT:1.0;0.724 FUNCTIONAL_SNP rs11970286 chr6 118680374 Intergenic 7 12852 CEU:1.0;0.923, CHB:1.0;0.769, JPT:1.0;0.904, YRI:1.0;0.642 FUNCTIONAL_SNP rs4307206 chr6 118813320 Intron 7 145798 CEU:1.0;0.923, CHB:0.842;0.579, JPT:1.0;0.751 FUNCTIONAL_SNP rs17227124 chr6 118741382 Intergenic 7 73860 CEU:1.0;0.923, CHB:0.844;0.582, JPT:1.0;0.753 FUNCTIONAL_SNP rs11967375 chr6 118823975 Intron 7 156453 CEU:1.0;0.893, CHB:0.774;0.523, JPT:1.0;0.724 LEAD_SNP rs11970286 chr6 118680374 Intergenic 7 ASSOCIATION 20062063 Electrocardiographic traits 6.09691001301 RPL29P4 - C6orf204 ASSOCIATION 19305409 QT interval 23.6989700043 RPL29P4 - C6orf204 FUNCTIONAL_SNP rs12661338 chr6 118794690 Intron 5a 114316 CEU:1.0;1.0, CHB:0.868;0.707, JPT:1.0;0.833 FUNCTIONAL_SNP rs17825393 chr6 118772583 Intergenic 6 92209 CEU:1.0;1.0, CHB:0.868;0.707, JPT:1.0;0.833 FUNCTIONAL_SNP rs11153730 chr6 118667522 Intergenic 6 12852 CEU:1.0;0.923, CHB:1.0;0.769, JPT:1.0;0.904, YRI:1.0;0.642 FUNCTIONAL_SNP rs17226667 chr6 118721628 Intergenic 6 41254 CEU:1.0;1.0, CHB:0.866;0.705, JPT:1.0;0.833 FUNCTIONAL_SNP rs11752626 chr6 118788652 Intron 7 108278 CEU:1.0;1.0, CHB:0.868;0.707, JPT:1.0;0.833 FUNCTIONAL_SNP rs4307206 chr6 118813320 Intron 7 132946 CEU:1.0;1.0, CHB:0.866;0.705, JPT:1.0;0.832 FUNCTIONAL_SNP rs17227124 chr6 118741382 Intergenic 7 61008 CEU:1.0;1.0, CHB:0.868;0.707, JPT:1.0;0.833 FUNCTIONAL_SNP rs11967375 chr6 118823975 Intron 7 143601 CEU:1.0;1.0, CHB:0.859;0.651, JPT:1.0;0.833 LEAD_SNP rs11756438 chr6 118993632 Intron 7 ASSOCIATION 19305408 QT interval 21.3010299957 SSXP10 - ASF1A FUNCTIONAL_SNP rs11756440 chr6 118993642 Intron 7 10 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.918 LEAD_SNP rs2817937 chr6 121098457 Intergenic 6 ASSOCIATION 20195514 Primary tooth development (number of teeth) 5.52287874528 RPL13AP15 - COX6A1P3 FUNCTIONAL_SNP rs2789067 chr6 121100486 Intergenic 7 2029 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2357972 chr6 121098311 Intergenic 7 146 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2789066 chr6 121100137 Intergenic 6 ASSOCIATION 20205591 HIV-1 control 5.04575749056 RPL13AP15 - COX6A1P3 LEAD_SNP rs1343075 chr6 121339179 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 5.69897000434 COX6A1P3 - C6orf170 FUNCTIONAL_SNP rs9398617 chr6 121359722 Intergenic 5b 20543 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12665708 chr6 121327844 Intergenic 7 11335 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1474015 chr6 121314717 Intergenic 7 24462 CEU:1.0;0.918, CHB:1.0;0.95, JPT:1.0;0.949, YRI:1.0;1.0 LEAD_SNP rs11154022 chr6 121748542 Intergenic 6 ASSOCIATION 20639392 Resting heart rate 7.15490195999 RPS15AP21 - GJA1 FUNCTIONAL_SNP rs12529695 chr6 121735276 Intergenic 5b 13266 CEU:1.0;0.953, CHB:0.952;0.906, JPT:1.0;0.864, YRI:1.0;1.0 LEAD_SNP rs9398652 chr6 122146034 Intergenic 6 ASSOCIATION 20639392 Resting heart rate 14.3979400087 RPL23AP48 - HSF2 FUNCTIONAL_SNP rs9388008 chr6 122138479 Intergenic 2b 7555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.806 FUNCTIONAL_SNP rs9372668 chr6 122188472 Intergenic 4 42438 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs9401459 chr6 122174598 Intergenic 5a 28564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs9320841 chr6 122114451 Intergenic 5b 31583 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741, YRI:0.963;0.806 FUNCTIONAL_SNP rs2269579 chr6 122156413 Intergenic 5b 10379 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.729 FUNCTIONAL_SNP rs1015451 chr6 122131485 Intergenic 5b 14549 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.966 FUNCTIONAL_SNP rs9320843 chr6 122187302 Intergenic 5b 41268 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs12110693 chr6 122158270 Intergenic 5b 12236 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs12212972 chr6 122154148 Intergenic 6 8114 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs1406667 chr6 122178493 Intergenic 6 32459 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.683 FUNCTIONAL_SNP rs9401457 chr6 122167499 Intergenic 6 21465 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs1919874 chr6 122173688 Intergenic 7 27654 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.79 FUNCTIONAL_SNP rs9401463 chr6 122186542 Intergenic 7 40508 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs12208772 chr6 122125427 Intergenic 7 20607 CEU:1.0;1.0, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.918 FUNCTIONAL_SNP rs1012020 chr6 122110346 Intergenic 7 35688 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.773 FUNCTIONAL_SNP rs1320759 chr6 122171460 Intergenic 7 25426 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.759 FUNCTIONAL_SNP rs1320761 chr6 122168138 Intergenic 7 22104 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs973399 chr6 122150246 Intergenic 7 4212 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs9375071 chr6 122186687 Intergenic 7 40653 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.683 FUNCTIONAL_SNP rs7767179 chr6 122120089 Intergenic 7 25945 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.773, YRI:0.959;0.79 LEAD_SNP rs12110693 chr6 122158270 Intergenic 5b ASSOCIATION 19396169 Biomedical quantitative traits 8.69897000434 RPL23AP48 - HSF2 FUNCTIONAL_SNP rs9372668 chr6 122188472 Intergenic 4 30202 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9401459 chr6 122174598 Intergenic 5a 16328 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1015451 chr6 122131485 Intergenic 5b 26785 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.894 FUNCTIONAL_SNP rs9320843 chr6 122187302 Intergenic 5b 29032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9401457 chr6 122167499 Intergenic 6 9229 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12212972 chr6 122154148 Intergenic 6 4122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9398652 chr6 122146034 Intergenic 6 12236 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs973399 chr6 122150246 Intergenic 7 8024 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs9401463 chr6 122186542 Intergenic 7 28272 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12208772 chr6 122125427 Intergenic 7 32843 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0, YRI:0.953;0.867 FUNCTIONAL_SNP rs1320759 chr6 122171460 Intergenic 7 13190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs1320761 chr6 122168138 Intergenic 7 9868 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1919874 chr6 122173688 Intergenic 7 15418 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 LEAD_SNP rs9491140 chr6 124691237 Intron 6 ASSOCIATION 20634892 Neuroticism 6.52287874528 NKAIN2 FUNCTIONAL_SNP rs9491142 chr6 124693017 Intron 4 1780 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs12192208 chr6 124693764 Intron 6 2527 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs12204812 chr6 124681503 Intron 7 9734 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741, YRI:1.0;0.596 LEAD_SNP rs9388489 chr6 126698719 Intergenic 6 ASSOCIATION 19430480 Type 1 diabetes 12.3979400087 CENPW - RPS4XP9 LEAD_SNP rs1361108 chr6 126767600 Intron 5b ASSOCIATION 21102462 Menarche (age at onset) 7.69897000434 CENPW - RPS4XP9 FUNCTIONAL_SNP rs9388486 chr6 126661154 Intergenic 2a 106446 CEU:1.0;0.917, CHB:1.0;1.0, YRI:0.932;0.507 FUNCTIONAL_SNP rs9321065 chr6 126744087 Intron 4 23513 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs9375435 chr6 126661858 Intron 5a 105742 CEU:0.957;0.878, CHB:1.0;1.0, YRI:0.932;0.507 FUNCTIONAL_SNP rs2326451 chr6 126811928 Intron 5a 44328 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6919397 chr6 126659043 Intergenic 5b 108557 CEU:1.0;0.92, CHB:1.0;1.0, YRI:1.0;0.596 FUNCTIONAL_SNP rs1361107 chr6 126767511 Intron 5b 89 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4621657 chr6 126896227 Intron 5b 128627 CEU:0.955;0.874, CHB:1.0;1.0, YRI:0.929;0.562 FUNCTIONAL_SNP rs1907067 chr6 126837663 Intron 5b 70063 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1826189 chr6 126922214 Intron 5b 154614 CEU:0.956;0.84, CHB:1.0;1.0 FUNCTIONAL_SNP rs1415671 chr6 126759587 Intron 5b 8013 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1120786 chr6 126808637 Intron 6 41037 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs9401888 chr6 126877523 Intron 6 109923 CEU:0.957;0.843, CHB:1.0;1.0 FUNCTIONAL_SNP rs4895808 chr6 126781434 Intron 6 13834 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2050644 chr6 126805255 Intron 6 37655 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs9398808 chr6 126758791 Intron 6 8809 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs9398809 chr6 126789144 Intron 6 21544 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs17754780 chr6 126664333 Intron 6 103267 CEU:1.0;0.92, CHB:1.0;1.0, YRI:0.932;0.507 FUNCTIONAL_SNP rs9401882 chr6 126755055 Intron 6 12545 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs9372840 chr6 126822635 Intron 6 55035 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.881 FUNCTIONAL_SNP rs9375442 chr6 126803137 Intron 6 35537 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.514 FUNCTIONAL_SNP rs1361109 chr6 126771143 Intron 6 3543 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.59 FUNCTIONAL_SNP rs1155939 chr6 126866133 Intron 6 98533 CEU:1.0;0.884, CHB:1.0;1.0 FUNCTIONAL_SNP rs1844593 chr6 126897827 Intron 6 130227 CEU:0.914;0.802, CHB:1.0;1.0, YRI:1.0;0.593 FUNCTIONAL_SNP rs1337735 chr6 126771024 Intron 6 3424 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs4897182 chr6 126755642 Intron 6 11958 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9385400 chr6 126764190 Intron 6 3410 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1159619 chr6 126801144 Intron 6 33544 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs9388487 chr6 126678268 Intergenic 6 89332 CEU:0.957;0.878, CHB:1.0;1.0 FUNCTIONAL_SNP rs9388489 chr6 126698719 Intergenic 6 68881 CEU:1.0;0.92, CHB:1.0;1.0 FUNCTIONAL_SNP rs9388496 chr6 126785062 Intron 6 17462 CEU:1.0;0.959, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7738836 chr6 126936235 Intron 6 168635 CEU:0.953;0.832, CHB:1.0;1.0, YRI:1.0;0.78 FUNCTIONAL_SNP rs9398803 chr6 126683594 Intergenic 7 84006 CEU:0.957;0.878, CHB:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs1340952 chr6 126951510 Intron 7 183910 CEU:0.957;0.843, YRI:1.0;0.812 FUNCTIONAL_SNP rs1340953 chr6 126951748 Intron 7 184148 CEU:0.957;0.843, CHB:1.0;1.0, YRI:1.0;0.78 FUNCTIONAL_SNP rs9398810 chr6 126815604 Intron 7 48004 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9401883 chr6 126797111 Intron 7 29511 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs4243491 chr6 126938536 Intron 7 170936 CEU:0.957;0.843, CHB:1.0;1.0 FUNCTIONAL_SNP rs9401892 chr6 126895368 Intron 7 127768 CEU:0.957;0.843, CHB:1.0;1.0, YRI:1.0;0.596 FUNCTIONAL_SNP rs9401897 chr6 126940641 Intron 7 173041 CEU:0.957;0.843, CHB:1.0;1.0 FUNCTIONAL_SNP rs4895811 chr6 126899853 Intron 7 132253 CEU:0.957;0.843, CHB:1.0;1.0, YRI:1.0;0.574 FUNCTIONAL_SNP rs4380768 chr6 126867351 Intron 7 99751 CEU:0.957;0.843, CHB:1.0;1.0, YRI:1.0;0.619 FUNCTIONAL_SNP rs1538170 chr6 126752874 Intron 7 14726 CEU:1.0;0.881, CHB:1.0;1.0 FUNCTIONAL_SNP rs1538171 chr6 126752884 Intron 7 14716 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1538172 chr6 126748493 Intron 7 19107 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs4339479 chr6 126936953 Intron 7 169353 CEU:0.957;0.843, CHB:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs4418209 chr6 126819699 Intron 7 52099 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs4629707 chr6 126937890 Intron 7 170290 CEU:0.955;0.838, CHB:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs9491652 chr6 126943620 Intron 7 176020 CEU:0.955;0.838, CHB:1.0;1.0 FUNCTIONAL_SNP rs9491653 chr6 126943630 Intron 7 176030 CEU:0.957;0.843, CHB:1.0;1.0 FUNCTIONAL_SNP rs4629706 chr6 126888331 Intron 7 120731 CEU:0.957;0.843, CHB:1.0;1.0 FUNCTIONAL_SNP rs9375439 chr6 126758540 Intron 7 9060 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs9375441 chr6 126778600 Intron 7 11000 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs9375446 chr6 126835015 Intron 7 67415 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs9375447 chr6 126874091 Intron 7 106491 CEU:0.955;0.838, CHB:1.0;1.0 FUNCTIONAL_SNP rs1572569 chr6 126771687 Intron 7 4087 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.596 FUNCTIONAL_SNP rs1490384 chr6 126851160 Intron 7 83560 CEU:1.0;0.884, CHB:1.0;1.0 FUNCTIONAL_SNP rs9388500 chr6 126876580 Intron 7 108980 CEU:0.957;0.843, CHB:1.0;1.0 FUNCTIONAL_SNP rs3861458 chr6 126912162 Intron 7 144562 CEU:0.956;0.841, CHB:1.0;1.0 FUNCTIONAL_SNP rs1490388 chr6 126835655 Intron 7 68055 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs4559102 chr6 126773580 Intron 7 5980 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2184967 chr6 126773487 Intron 7 5887 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2184968 chr6 126760994 Intron 7 6606 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.574 FUNCTIONAL_SNP rs7738135 chr6 126829981 Intron 7 62381 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1538956 chr6 126964026 Intron 7 196426 CEU:0.957;0.843, CHB:1.0;1.0 FUNCTIONAL_SNP rs2045258 chr6 126674354 Intergenic 7 93246 CEU:1.0;0.92, CHB:1.0;1.0 FUNCTIONAL_SNP rs4565329 chr6 126752798 Intron 7 14802 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1155938 chr6 126866472 Intron 7 98872 CEU:1.0;0.884, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1417572 chr6 126958727 Intron 7 191127 CEU:0.957;0.843, CHB:1.0;1.0, YRI:1.0;0.78 FUNCTIONAL_SNP rs7743860 chr6 126927717 Intron 7 160117 CEU:0.956;0.839, CHB:1.0;1.0 FUNCTIONAL_SNP rs1387916 chr6 126886731 Intron 7 119131 CEU:0.955;0.838, CHB:1.0;1.0 FUNCTIONAL_SNP rs4897181 chr6 126753564 Intron 7 14036 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2152876 chr6 126761228 Intron 7 6372 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9385399 chr6 126759033 Intron 7 8567 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.615 FUNCTIONAL_SNP rs3861456 chr6 126898660 Intron 7 131060 CEU:0.954;0.834, CHB:1.0;1.0 FUNCTIONAL_SNP rs9388490 chr6 126704795 Intron 7 62805 CEU:1.0;0.88, CHB:1.0;1.0 FUNCTIONAL_SNP rs9388494 chr6 126776094 Intron 7 8494 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.635 FUNCTIONAL_SNP rs3861455 chr6 126897969 Intron 7 130369 CEU:0.957;0.843, CHB:1.0;1.0 FUNCTIONAL_SNP rs9388501 chr6 126903011 Intron 7 135411 CEU:0.956;0.915, CHB:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs6921183 chr6 126869029 Intron 7 101429 CEU:0.957;0.843, CHB:1.0;1.0 FUNCTIONAL_SNP rs4422634 chr6 126806676 Intron 7 39076 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.686 FUNCTIONAL_SNP rs6907898 chr6 126666416 Intron 7 101184 CEU:1.0;0.919, CHB:1.0;1.0 FUNCTIONAL_SNP rs1591805 chr6 126717064 Intron 7 50536 CEU:1.0;0.921, CHB:1.0;1.0, YRI:1.0;0.721 FUNCTIONAL_SNP rs4549631 chr6 126966308 Intron 7 198708 CEU:0.957;0.843, CHB:1.0;1.0, YRI:1.0;0.78 LEAD_SNP rs1490388 chr6 126835655 Intron 7 ASSOCIATION 18391951 Height 6.22184874962 CENPW - RPS4XP9 LEAD_SNP rs4549631 chr6 126966308 Intron 7 ASSOCIATION 18391952 Height 12.3010299957 CENPW - RPS4XP9 LEAD_SNP rs13204965 chr6 127167072 Intron 6 ASSOCIATION 21533022 Bone mineral density 7.52287874528 RPS4XP9 - RSPO3 FUNCTIONAL_SNP rs1262476 chr6 126986996 Intron 5b 180076 CEU:1.0;0.939, CHB:1.0;1.0 FUNCTIONAL_SNP rs10484759 chr6 127037042 Intron 5b 130030 CEU:1.0;0.939, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13212044 chr6 127025661 Intron 6 141411 CEU:1.0;0.939 FUNCTIONAL_SNP rs13194508 chr6 127144683 Intron 6 22389 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17563605 chr6 127164572 Intron 6 2500 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs12525327 chr6 127107248 Intron 7 59824 CEU:0.931;0.812 LEAD_SNP rs972275 chr6 127391844 Intron 5a ASSOCIATION 19084217 Serum markers of iron status 5.69897000434 RPS4XP9 - RSPO3 FUNCTIONAL_SNP rs1936811 chr6 127383860 Intron 6 7984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs9321069 chr6 127392977 Intron 6 1133 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1936813 chr6 127392421 Intron 7 577 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9491696 chr6 127452639 Intron 2a ASSOCIATION 20935629 Waist-hip ratio 31.6989700043 RSPO3 ASSOCIATION 20935629 Waist-hip ratio 11.0 RSPO3 FUNCTIONAL_SNP rs1892172 chr6 127476516 Coding 7 23877 CEU:1.0;0.848, CHB:0.948;0.816, JPT:0.948;0.816 FUNCTIONAL_SNP rs2503111 chr6 127468188 Intron 2a 15549 CEU:1.0;0.848, CHB:0.875;0.595, JPT:1.0;0.716 FUNCTIONAL_SNP rs9491700 chr6 127482008 Intron 5a 29369 CEU:1.0;0.884, CHB:0.949;0.82, JPT:0.898;0.769, YRI:1.0;0.859 FUNCTIONAL_SNP rs2745353 chr6 127452935 Intron 5b 296 CEU:1.0;0.962, CHB:1.0;0.732, JPT:1.0;0.833 FUNCTIONAL_SNP rs1936801 chr6 127436313 Intron 5b 16326 CEU:1.0;0.926, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;0.579 FUNCTIONAL_SNP rs2489629 chr6 127476717 Intron 5b 24078 CEU:1.0;0.848, CHB:0.832;0.575, JPT:0.839;0.64 FUNCTIONAL_SNP rs2503326 chr6 127501926 Intron 5b 49287 CEU:1.0;0.839, CHB:0.818;0.573, JPT:0.874;0.684 FUNCTIONAL_SNP rs2800708 chr6 127437617 Intron 5b 15022 CEU:1.0;0.922, CHB:1.0;0.722, JPT:1.0;0.826 FUNCTIONAL_SNP rs11154386 chr6 127481810 Intron 5b 29171 CEU:1.0;0.886, CHB:0.95;0.824, JPT:0.944;0.804, YRI:1.0;0.892 FUNCTIONAL_SNP rs7771990 chr6 127497764 Intron 5b 45125 CEU:1.0;0.887, CHB:0.951;0.827, JPT:0.901;0.774, YRI:0.895;0.801 FUNCTIONAL_SNP rs2326566 chr6 127492840 Intron 5b 40201 CEU:1.0;0.884, CHB:0.949;0.82, JPT:0.948;0.816, YRI:0.885;0.755 FUNCTIONAL_SNP rs2489623 chr6 127455821 Intron 6 3182 CEU:1.0;0.922, CHB:1.0;0.722, JPT:1.0;0.788 FUNCTIONAL_SNP rs2489630 chr6 127486617 Intron 6 33978 CEU:1.0;0.848, CHB:0.832;0.575, JPT:0.839;0.64 FUNCTIONAL_SNP rs1936807 chr6 127448249 Intron 6 4390 CEU:1.0;0.962, CHB:1.0;0.732, JPT:1.0;0.796 FUNCTIONAL_SNP rs9491703 chr6 127493468 Intron 6 40829 CEU:0.958;0.847, CHB:0.897;0.768, JPT:0.952;0.865, YRI:1.0;0.867 FUNCTIONAL_SNP rs2503107 chr6 127463376 Intron 6 10737 CEU:1.0;0.851, CHB:0.887;0.65, JPT:1.0;0.833 FUNCTIONAL_SNP rs4382293 chr6 127475433 Intron 6 22794 CEU:1.0;0.857, CHB:0.95;0.824, JPT:0.905;0.783 FUNCTIONAL_SNP rs4424101 chr6 127484533 Intron 6 31894 CEU:1.0;0.889, CHB:0.951;0.827, JPT:0.903;0.778, YRI:0.895;0.774 FUNCTIONAL_SNP rs4566896 chr6 127482362 Intron 6 29723 CEU:1.0;0.854, CHB:0.948;0.817, JPT:0.947;0.853, YRI:1.0;0.584 FUNCTIONAL_SNP rs9491704 chr6 127495292 Intron 6 42653 CEU:1.0;0.888, CHB:0.946;0.812, JPT:0.897;0.767, YRI:0.888;0.759 FUNCTIONAL_SNP rs7745274 chr6 127509157 Intron 6 56518 CEU:1.0;0.814, CHB:0.827;0.565, JPT:0.828;0.592 FUNCTIONAL_SNP rs6569474 chr6 127493611 Intron 7 40972 CEU:1.0;0.848, CHB:0.949;0.82, JPT:0.948;0.816, YRI:0.949;0.501 FUNCTIONAL_SNP rs2503320 chr6 127464754 Intron 7 12115 CEU:1.0;0.848, CHB:0.886;0.622, JPT:1.0;0.826 FUNCTIONAL_SNP rs1936789 chr6 127419737 Intron 7 32902 CEU:1.0;0.884, CHB:0.901;0.775, JPT:0.948;0.817 FUNCTIONAL_SNP rs1936800 chr6 127436064 Intron 7 16575 CEU:1.0;0.926, CHB:1.0;0.956, JPT:1.0;1.0 FUNCTIONAL_SNP rs1936802 chr6 127461682 Intron 7 9043 CEU:1.0;0.848, CHB:0.886;0.622, JPT:1.0;0.788, YRI:1.0;0.517 FUNCTIONAL_SNP rs2503323 chr6 127496512 Intron 7 43873 CEU:1.0;0.857, CHB:0.84;0.591, JPT:0.835;0.581 FUNCTIONAL_SNP rs1936805 chr6 127452116 Intron 7 523 CEU:1.0;0.96, CHB:1.0;0.722, JPT:1.0;0.826 FUNCTIONAL_SNP rs1936809 chr6 127477268 Intron 7 24629 CEU:1.0;0.854, CHB:0.949;0.821, JPT:0.901;0.774 FUNCTIONAL_SNP rs13204656 chr6 127474682 Intron 7 22043 CEU:1.0;0.918, CHB:0.948;0.816, JPT:0.95;0.822, YRI:0.891;0.793 FUNCTIONAL_SNP rs2489631 chr6 127490599 Intron 7 37960 CEU:1.0;0.848, CHB:0.832;0.575, JPT:0.839;0.64 FUNCTIONAL_SNP rs2503109 chr6 127465044 Intron 7 12405 CEU:1.0;0.857, CHB:0.891;0.636, JPT:1.0;0.833 FUNCTIONAL_SNP rs7742668 chr6 127493141 Intron 7 40502 CEU:1.0;0.884, CHB:0.949;0.82, JPT:0.948;0.816, YRI:0.85;0.723 FUNCTIONAL_SNP rs2503322 chr6 127457260 Intron 7 4621 CEU:1.0;0.848, CHB:0.886;0.622, JPT:1.0;0.788, YRI:1.0;0.517 FUNCTIONAL_SNP rs9285458 chr6 127463645 Intron 7 11006 CEU:1.0;0.884, CHB:1.0;0.91, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs7766106 chr6 127455138 Intron 7 2499 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.888;0.788 FUNCTIONAL_SNP rs6916318 chr6 127435106 Intron 7 17533 CEU:1.0;0.891, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;0.565 FUNCTIONAL_SNP rs2326565 chr6 127490311 Intron 7 37672 CEU:1.0;0.885, CHB:1.0;0.86, JPT:0.902;0.777, YRI:1.0;0.887 FUNCTIONAL_SNP rs3734626 chr6 127471791 Intron 7 19152 CEU:1.0;0.884, CHB:0.949;0.82, JPT:0.948;0.816, YRI:0.888;0.788 FUNCTIONAL_SNP rs7775715 chr6 127492375 Intron 7 39736 CEU:1.0;0.891, CHB:0.95;0.824, JPT:0.95;0.823, YRI:0.895;0.774 FUNCTIONAL_SNP rs9482771 chr6 127446610 Intron 7 6029 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs9491701 chr6 127482207 Intron 7 29568 CEU:1.0;0.884, CHB:0.949;0.82, JPT:0.898;0.769, YRI:1.0;0.893 FUNCTIONAL_SNP rs4644087 chr6 127481154 Intron 7 28515 CEU:1.0;0.846, CHB:0.949;0.82, JPT:0.948;0.816, YRI:1.0;0.536 FUNCTIONAL_SNP rs9491706 chr6 127496226 Intron 7 43587 CEU:1.0;0.884, CHB:0.949;0.82, JPT:0.898;0.769, YRI:0.888;0.788 LEAD_SNP rs2180341 chr6 127600630 Intron 7 ASSOCIATION 18326623 Breast cancer 7.52287874528 RNF146 FUNCTIONAL_SNP rs1543432 chr6 127698018 Intergenic 2b 97388 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.844 FUNCTIONAL_SNP rs6569480 chr6 127621748 Intron 4 21118 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9401953 chr6 127687574 Intergenic 4 86944 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs6913424 chr6 127707010 Intergenic 4 106380 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs13218061 chr6 127653758 Intron 5b 53128 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6930849 chr6 127630963 Intron 5b 30333 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4897207 chr6 127605898 Intron 5b 5268 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6569479 chr6 127606588 Intron 6 5958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9401951 chr6 127671632 Intergenic 6 71002 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs9321076 chr6 127655614 Intron 6 54984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3798852 chr6 127636733 Intron 6 36103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3798853 chr6 127636823 Intron 6 36193 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9285460 chr6 127640190 Intron 6 39560 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs7760748 chr6 127690062 Intergenic 6 89432 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.845 FUNCTIONAL_SNP rs2144743 chr6 127633810 Intron 6 33180 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9388568 chr6 127690694 Intergenic 7 90064 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs2326567 chr6 127606160 Intron 7 5530 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7756336 chr6 127650299 Intron 7 49669 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9398838 chr6 127635285 Intron 7 34655 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9398840 chr6 127669744 Intergenic 7 69114 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs9398842 chr6 127674662 Intergenic 7 74032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.819 FUNCTIONAL_SNP rs7756880 chr6 127683999 Intergenic 7 83369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.848 FUNCTIONAL_SNP rs7756884 chr6 127684018 Intergenic 7 83388 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.843 FUNCTIONAL_SNP rs9401950 chr6 127655485 Intron 7 54855 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6937287 chr6 127645719 Intron 7 45089 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9375503 chr6 127677071 Intergenic 7 76441 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs3798857 chr6 127659473 Intron 7 58843 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6916990 chr6 127698759 Intergenic 7 98129 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs7776136 chr6 127638348 Intron 7 37718 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7766942 chr6 127691323 Intergenic 7 90693 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs2144742 chr6 127595786 Intron 7 4844 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs802734 chr6 128278798 Intergenic 7 ASSOCIATION 20190752 Celiac disease 13.5228787453 MRPS17P5 - PTPRK FUNCTIONAL_SNP rs802730 chr6 128280104 Intergenic 7 1306 CEU:1.0;0.951, JPT:1.0;0.718 LEAD_SNP rs10499138 chr6 128492182 Intron 7 ASSOCIATION 20068591 Hearing impairment 5.69897000434 PTPRK LEAD_SNP rs2275215 chr6 129861392 Intron 7 ASSOCIATION 20397748 Body mass index 6.39794000867 MESTP1 - ARHGAP18 LEAD_SNP rs6569648 chr6 130349119 Intron 6 ASSOCIATION 20881960 Height 21.0 L3MBTL3 FUNCTIONAL_SNP rs7740107 chr6 130374461 Intron 7 25342 CEU:0.944;0.845 LEAD_SNP rs6899976 chr6 130358428 Intron 4 ASSOCIATION 18391951 Height 5.22184874962 L3MBTL3 FUNCTIONAL_SNP rs9388767 chr6 130357553 Intron 6 875 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9375702 chr6 130384187 Intron 7 25759 CEU:0.953;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 LEAD_SNP rs2807278 chr6 131809920 Intergenic 7 ASSOCIATION 21552555 Obesity 6.52287874528 RPL21P67 - ARG1 FUNCTIONAL_SNP rs2446222 chr6 131810238 Intergenic 5b 318 CEU:0.929;0.863, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2446215 chr6 131803997 Intergenic 7 5923 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;0.655 FUNCTIONAL_SNP rs9398984 chr6 131803662 Intergenic 7 6258 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;0.643 LEAD_SNP rs7769051 chr6 133146796 Intergenic 6 ASSOCIATION 21150874 Diabetic nephropathy 5.69897000434 SNORA33 - RPL23AP46 LEAD_SNP rs9402515 chr6 133860345 Intergenic 7 ASSOCIATION 18464913 Protein quantitative trait loci 6.0 EYA4 - MGC34034 LEAD_SNP rs12190287 chr6 134214525 Exon,non-coding 4 ASSOCIATION 21378990 Coronary heart disease 12.0 TCF21 LEAD_SNP rs2049953 chr6 135138990 Intergenic 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (AST) 5.39794000867 FAM8A6P - MEMO1P2 FUNCTIONAL_SNP rs9483753 chr6 135136700 Intergenic 7 2290 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7775698 chr6 135418635 Intergenic 3a ASSOCIATION 20927387 Red blood cell traits 15.0 HBS1L - MYB ASSOCIATION 20927387 Red blood cell traits 14.0 HBS1L - MYB ASSOCIATION 20139978 Hematological and biochemical traits 65.5228787453 HBS1L - MYB ASSOCIATION 20139978 Hematological and biochemical traits 55.5228787453 HBS1L - MYB ASSOCIATION 19853236 Hematology traits 17.096910013 HBS1L - MYB ASSOCIATION 19853236 Hematology traits 12.3010299957 HBS1L - MYB FUNCTIONAL_SNP rs9389268 chr6 135419631 Intergenic 3a 996 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs4895441 chr6 135426573 Intergenic 5b 7938 CEU:0.943;0.841, CHB:0.879;0.729 FUNCTIONAL_SNP rs9376090 chr6 135411228 Intergenic 5b 7407 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs9402686 chr6 135427817 Intergenic 6 9182 CEU:0.944;0.891, CHB:0.879;0.729 FUNCTIONAL_SNP rs7776054 chr6 135418916 Intergenic 7 281 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11759553 chr6 135422296 Intergenic 7 3661 CEU:0.943;0.841, CHB:0.879;0.729 FUNCTIONAL_SNP rs9389269 chr6 135427159 Intergenic 7 8524 CEU:0.941;0.836, CHB:0.937;0.828 FUNCTIONAL_SNP rs9399137 chr6 135419018 Intergenic 7 383 CEU:1.0;1.0, CHB:1.0;0.881, JPT:1.0;1.0 LEAD_SNP rs7776054 chr6 135418916 Intergenic 7 ASSOCIATION 19862010 Mean corpuscular hemoglobin 68.15490196 HBS1L - MYB FUNCTIONAL_SNP rs9389268 chr6 135419631 Intergenic 3a 715 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs7775698 chr6 135418635 Intergenic 3a 281 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4895441 chr6 135426573 Intergenic 5b 7657 CEU:0.941;0.836, CHB:0.879;0.729 FUNCTIONAL_SNP rs9376090 chr6 135411228 Intergenic 5b 7688 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs9402686 chr6 135427817 Intergenic 6 8901 CEU:0.945;0.848, CHB:0.887;0.746 FUNCTIONAL_SNP rs11759553 chr6 135422296 Intergenic 7 3380 CEU:0.895;0.801, CHB:0.887;0.746 FUNCTIONAL_SNP rs9399137 chr6 135419018 Intergenic 7 102 CEU:1.0;1.0, CHB:1.0;0.881, JPT:1.0;1.0 LEAD_SNP rs9399137 chr6 135419018 Intergenic 7 ASSOCIATION 19853236 Hematology traits 9.0 HBS1L - MYB ASSOCIATION 17767159 F-cell distribution 35.5228787453 HBS1L - MYB FUNCTIONAL_SNP rs7775698 chr6 135418635 Intergenic 3a 383 CEU:1.0;1.0, CHB:1.0;0.881, JPT:1.0;1.0 FUNCTIONAL_SNP rs9389268 chr6 135419631 Intergenic 3a 613 CEU:1.0;1.0, CHB:1.0;0.88, JPT:1.0;1.0 FUNCTIONAL_SNP rs4895441 chr6 135426573 Intergenic 5b 7555 CEU:0.943;0.841, CHB:0.853;0.603 FUNCTIONAL_SNP rs9376090 chr6 135411228 Intergenic 5b 7790 CEU:1.0;0.944, CHB:1.0;0.881, JPT:1.0;0.947 FUNCTIONAL_SNP rs9402686 chr6 135427817 Intergenic 6 8799 CEU:0.944;0.891, CHB:0.853;0.603 FUNCTIONAL_SNP rs11759553 chr6 135422296 Intergenic 7 3278 CEU:0.943;0.841, CHB:0.853;0.603 FUNCTIONAL_SNP rs9389269 chr6 135427159 Intergenic 7 8141 CEU:0.941;0.836, CHB:0.859;0.691 FUNCTIONAL_SNP rs7776054 chr6 135418916 Intergenic 7 102 CEU:1.0;1.0, CHB:1.0;0.881, JPT:1.0;1.0 LEAD_SNP rs9373124 chr6 135423209 Intergenic 7 ASSOCIATION 21738478 White blood cell types 10.0 HBS1L - MYB ASSOCIATION 19862010 Other erythrocyte phenotypes 13.15490196 HBS1L - MYB FUNCTIONAL_SNP rs4895441 chr6 135426573 Intergenic 5b 3364 CEU:0.943;0.84, CHB:1.0;0.934, JPT:1.0;1.0 FUNCTIONAL_SNP rs9376092 chr6 135427144 Intergenic 6 3935 CEU:1.0;0.896, CHB:1.0;0.934, JPT:1.0;1.0 FUNCTIONAL_SNP rs9402686 chr6 135427817 Intergenic 6 4608 CEU:0.948;0.898, CHB:1.0;0.939, JPT:1.0;1.0 FUNCTIONAL_SNP rs11759553 chr6 135422296 Intergenic 7 913 CEU:1.0;0.95, CHB:1.0;0.939, JPT:1.0;1.0 FUNCTIONAL_SNP rs4895440 chr6 135426558 Intergenic 7 3349 CEU:1.0;0.903, CHB:1.0;0.939, JPT:1.0;1.0 FUNCTIONAL_SNP rs9389269 chr6 135427159 Intergenic 7 3950 CEU:0.945;0.847, CHB:1.0;0.937, JPT:1.0;1.0 LEAD_SNP rs4895441 chr6 135426573 Intergenic 5b ASSOCIATION 20139978 Hematological and biochemical traits 8.69897000434 HBS1L - MYB ASSOCIATION 19862010 Mean corpuscular volume 85.15490196 HBS1L - MYB FUNCTIONAL_SNP rs7775698 chr6 135418635 Intergenic 3a 7938 CEU:0.943;0.841, CHB:0.879;0.729 FUNCTIONAL_SNP rs9389268 chr6 135419631 Intergenic 3a 6942 CEU:0.943;0.841, CHB:0.877;0.727 FUNCTIONAL_SNP rs9376092 chr6 135427144 Intergenic 6 571 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9402686 chr6 135427817 Intergenic 6 1244 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs9399137 chr6 135419018 Intergenic 7 7555 CEU:0.943;0.841, CHB:0.853;0.603 FUNCTIONAL_SNP rs11759553 chr6 135422296 Intergenic 7 4277 CEU:0.945;0.894, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9373124 chr6 135423209 Intergenic 7 3364 CEU:0.943;0.84, CHB:1.0;0.934, JPT:1.0;1.0 FUNCTIONAL_SNP rs4895440 chr6 135426558 Intergenic 7 15 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9389269 chr6 135427159 Intergenic 7 586 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.734 FUNCTIONAL_SNP rs7776054 chr6 135418916 Intergenic 7 7657 CEU:0.941;0.836, CHB:0.879;0.729 LEAD_SNP rs9376092 chr6 135427144 Intergenic 6 ASSOCIATION 20183929 Beta thalassemia/hemoglobin E disease 10.6989700043 HBS1L - MYB LEAD_SNP rs9402686 chr6 135427817 Intergenic 6 ASSOCIATION 19820697 Hematological parameters 41.15490196 HBS1L - MYB FUNCTIONAL_SNP rs7775698 chr6 135418635 Intergenic 3a 9182 CEU:0.944;0.891, CHB:0.879;0.729 FUNCTIONAL_SNP rs9389268 chr6 135419631 Intergenic 3a 8186 CEU:0.947;0.852, CHB:0.886;0.743 FUNCTIONAL_SNP rs4895441 chr6 135426573 Intergenic 5b 1244 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs9376090 chr6 135411228 Intergenic 5b 16589 CEU:0.895;0.801, CHB:0.887;0.746 FUNCTIONAL_SNP rs9376092 chr6 135427144 Intergenic 6 673 CEU:1.0;0.897, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9399137 chr6 135419018 Intergenic 7 8799 CEU:0.944;0.891, CHB:0.853;0.603 FUNCTIONAL_SNP rs11759553 chr6 135422296 Intergenic 7 5521 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9373124 chr6 135423209 Intergenic 7 4608 CEU:0.948;0.898, CHB:1.0;0.939, JPT:1.0;1.0 FUNCTIONAL_SNP rs4895440 chr6 135426558 Intergenic 7 1259 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9389269 chr6 135427159 Intergenic 7 658 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7776054 chr6 135418916 Intergenic 7 8901 CEU:0.945;0.848, CHB:0.887;0.746 LEAD_SNP rs9494145 chr6 135432552 Intergenic 7 ASSOCIATION 20927387 Red blood cell traits 14.5228787453 HBS1L - MYB FUNCTIONAL_SNP rs9483788 chr6 135435501 Intergenic 2a 2949 CEU:1.0;0.871, CHB:0.932;0.728, JPT:1.0;0.894, YRI:1.0;1.0 FUNCTIONAL_SNP rs6920211 chr6 135431318 Intergenic 5a 1234 CEU:1.0;0.824, CHB:1.0;0.839, JPT:1.0;0.901 LEAD_SNP rs9483788 chr6 135435501 Intergenic 2a ASSOCIATION 19862010 Hematocrit 14.5228787453 HBS1L - MYB ASSOCIATION 19862010 Other erythrocyte phenotypes 47.0 HBS1L - MYB FUNCTIONAL_SNP rs9494145 chr6 135432552 Intergenic 7 2949 CEU:1.0;0.871, CHB:0.932;0.728, JPT:1.0;0.894, YRI:1.0;1.0 LEAD_SNP rs6569992 chr6 135452152 Intergenic 7 ASSOCIATION 20927387 Red blood cell traits 7.52287874528 HBS1L - MYB ASSOCIATION 20927387 Red blood cell traits 8.0 HBS1L - MYB ASSOCIATION 20927387 Red blood cell traits 8.22184874962 HBS1L - MYB FUNCTIONAL_SNP rs6924687 chr6 135467521 Intergenic 2b 15369 CEU:1.0;0.913, JPT:1.0;0.526 FUNCTIONAL_SNP rs9494154 chr6 135468005 Intergenic 5b 15853 CEU:1.0;0.913, JPT:1.0;0.526 FUNCTIONAL_SNP rs17064262 chr6 135465474 Intergenic 5b 13322 CEU:1.0;0.913, JPT:1.0;0.526 FUNCTIONAL_SNP rs9389272 chr6 135459837 Intergenic 6 7685 CEU:1.0;1.0, CHB:1.0;0.787, JPT:1.0;0.72, YRI:0.91;0.578 FUNCTIONAL_SNP rs6934903 chr6 135451564 Intergenic 7 588 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0 LEAD_SNP rs947583 chr6 136133659 Intergenic 4 ASSOCIATION 20558539 Serum phosphorus levels 11.5228787453 GAPDHL19 - PDE7B FUNCTIONAL_SNP rs7760254 chr6 136132295 Intergenic 5b 1364 CEU:1.0;1.0, CHB:1.0;0.719, JPT:1.0;0.749 FUNCTIONAL_SNP rs7742626 chr6 136132496 Intergenic 6 1163 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.759 FUNCTIONAL_SNP rs927330 chr6 136131756 Intergenic 6 1903 CEU:1.0;1.0, CHB:0.941;0.667, JPT:0.93;0.685 FUNCTIONAL_SNP rs6570043 chr6 136134098 Intergenic 7 439 CEU:1.0;0.95, CHB:1.0;0.625, JPT:1.0;0.636 FUNCTIONAL_SNP rs2027516 chr6 136131888 Intergenic 7 1771 CEU:1.0;0.95, CHB:0.941;0.667, JPT:0.93;0.685 LEAD_SNP rs2327832 chr6 137973068 Intergenic 6 ASSOCIATION 20190752 Celiac disease 18.3979400087 OLIG3 - TNFAIP3 FUNCTIONAL_SNP rs6927172 chr6 138002175 Intergenic 2b 29107 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6933404 chr6 137959235 Intergenic 7 13833 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs6920220 chr6 138006504 Intergenic 7 33436 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17264332 chr6 138005515 Intergenic 7 32447 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10499194 chr6 138002637 Intergenic 5b ASSOCIATION 17982456 Rheumatoid arthritis 9.0 OLIG3 - TNFAIP3 FUNCTIONAL_SNP rs12525643 chr6 138011151 Intergenic 6 8514 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6920220 chr6 138006504 Intergenic 7 ASSOCIATION 21297633 Ulcerative colitis 16.096910013 OLIG3 - TNFAIP3 ASSOCIATION 20453842 Rheumatoid arthritis 12.0457574906 OLIG3 - TNFAIP3 ASSOCIATION 18794853 Rheumatoid arthritis 8.69897000434 OLIG3 - TNFAIP3 ASSOCIATION 17982456 Rheumatoid arthritis 7.0 OLIG3 - TNFAIP3 FUNCTIONAL_SNP rs6927172 chr6 138002175 Intergenic 2b 4329 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2327832 chr6 137973068 Intergenic 6 33436 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6933404 chr6 137959235 Intergenic 7 47269 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs17264332 chr6 138005515 Intergenic 7 989 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs5029939 chr6 138195723 Intron 5a ASSOCIATION 19165918 Systemic lupus erythematosus 11.5228787453 TNFAIP3 FUNCTIONAL_SNP rs2230926 chr6 138196066 Coding 5b 343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5029937 chr6 138195151 Intron 5a 572 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2230926 chr6 138196066 Coding 5b ASSOCIATION 20453841 Rheumatoid arthritis 5.69897000434 TNFAIP3 ASSOCIATION 19838193 Systemic lupus erythematosus 17.0 TNFAIP3 FUNCTIONAL_SNP rs5029937 chr6 138195151 Intron 5a 915 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5029939 chr6 138195723 Intron 5a 343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs610604 chr6 138199417 Intron 4 ASSOCIATION 20953190 Psoriasis 6.15490195999 TNFAIP3 ASSOCIATION 19169254 Psoriasis 11.0457574906 TNFAIP3 FUNCTIONAL_SNP rs629953 chr6 138195041 Intron 5a 4376 CEU:0.956;0.809, CHB:1.0;0.595 FUNCTIONAL_SNP rs674451 chr6 138216788 Intergenic 7 17371 CEU:1.0;0.96, CHB:1.0;0.797, JPT:1.0;1.0, YRI:0.835;0.698 LEAD_SNP rs628751 chr6 139838419 Intergenic 7 ASSOCIATION 19862010 Mean corpuscular hemoglobin 17.0 CITED2 - RPS3AP24 FUNCTIONAL_SNP rs643381 chr6 139839423 Intergenic 2b 1004 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs592423 chr6 139840693 Intergenic 5b 2274 CEU:1.0;0.84, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs636202 chr6 139843583 Intergenic 5b 5164 CEU:1.0;1.0, CHB:1.0;0.871, JPT:1.0;0.754 FUNCTIONAL_SNP rs634869 chr6 139831757 Intergenic 5b 6662 CEU:1.0;0.804, CHB:1.0;0.873, JPT:1.0;0.715 FUNCTIONAL_SNP rs590856 chr6 139844429 Intergenic 6 6010 CEU:1.0;0.84, CHB:1.0;0.873, JPT:1.0;0.715 FUNCTIONAL_SNP rs605066 chr6 139829666 Intergenic 6 8753 CEU:1.0;0.826, CHB:1.0;0.929, JPT:1.0;0.699 FUNCTIONAL_SNP rs668459 chr6 139835689 Intergenic 7 2730 CEU:1.0;0.804, CHB:1.0;0.817, JPT:1.0;0.679 LEAD_SNP rs643381 chr6 139839423 Intergenic 2b ASSOCIATION 19862010 Mean corpuscular volume 24.3010299957 CITED2 - RPS3AP24 FUNCTIONAL_SNP rs592423 chr6 139840693 Intergenic 5b 1270 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;0.933 FUNCTIONAL_SNP rs634869 chr6 139831757 Intergenic 5b 7666 CEU:1.0;0.95, CHB:1.0;0.873, JPT:1.0;0.766 FUNCTIONAL_SNP rs636202 chr6 139843583 Intergenic 5b 4160 CEU:1.0;1.0, CHB:1.0;0.883, JPT:1.0;0.739 FUNCTIONAL_SNP rs590856 chr6 139844429 Intergenic 6 5006 CEU:1.0;0.953, CHB:1.0;0.885, JPT:1.0;0.69 FUNCTIONAL_SNP rs605066 chr6 139829666 Intergenic 6 9757 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;0.768 FUNCTIONAL_SNP rs668459 chr6 139835689 Intergenic 7 3734 CEU:1.0;0.95, CHB:1.0;0.817, JPT:1.0;0.72 FUNCTIONAL_SNP rs628751 chr6 139838419 Intergenic 7 1004 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs632057 chr6 139834012 Intergenic 7 5411 CEU:1.0;0.814, CHB:1.0;0.873, JPT:1.0;0.766 FUNCTIONAL_SNP rs679582 chr6 139831180 Intergenic 7 8243 CEU:1.0;0.826, CHB:1.0;0.885, JPT:1.0;0.776 LEAD_SNP rs642858 chr6 140273647 Intergenic 6 ASSOCIATION 21490949 Type 2 diabetes 5.69897000434 CITED2 - RPS3AP24 FUNCTIONAL_SNP rs1361248 chr6 140295358 Intergenic 2a 21711 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs6933684 chr6 140300384 Intergenic 5b 26737 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs623331 chr6 140284946 Intergenic 5b 11299 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs646747 chr6 140280368 Intergenic 6 6721 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs646695 chr6 140280398 Intergenic 7 6751 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs603321 chr6 140256669 Intergenic 7 16978 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 LEAD_SNP rs11155133 chr6 141169825 Intron 5b ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 6.52287874528 RPS3AP24 - RPS18P10 LEAD_SNP rs225717 chr6 142548099 Intergenic 7 ASSOCIATION 21060863 Retinal vascular caliber 16.0 VTA1 - GPR126 FUNCTIONAL_SNP rs11155233 chr6 142348266 Intergenic 3a 199833 CEU:0.928;0.805 FUNCTIONAL_SNP rs225712 chr6 142545280 Intergenic 5b 2819 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs225714 chr6 142546938 Intergenic 5b 1161 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741, YRI:1.0;1.0 FUNCTIONAL_SNP rs225613 chr6 142460263 Intergenic 5b 87836 CEU:1.0;1.0, CHB:1.0;0.528 FUNCTIONAL_SNP rs225743 chr6 142562281 Intergenic 5b 14182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs225744 chr6 142562417 Intergenic 5b 14318 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs225745 chr6 142562457 Intergenic 5b 14358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs12206319 chr6 142363726 Intergenic 6 184373 CEU:1.0;0.868 FUNCTIONAL_SNP rs225694 chr6 142527142 Intron 6 20957 CEU:1.0;1.0, CHB:1.0;0.528 FUNCTIONAL_SNP rs12212141 chr6 142359772 Intergenic 6 188327 CEU:0.928;0.805 FUNCTIONAL_SNP rs225716 chr6 142547813 Intergenic 6 286 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs225730 chr6 142556312 Intergenic 6 8213 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs225731 chr6 142556389 Intergenic 6 8290 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.658 FUNCTIONAL_SNP rs225740 chr6 142561402 Intergenic 6 13303 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs2842759 chr6 142436352 Intergenic 7 111747 CEU:1.0;1.0, CHB:1.0;0.528 FUNCTIONAL_SNP rs11155234 chr6 142408707 Intron 7 139392 CEU:1.0;0.933 FUNCTIONAL_SNP rs9496231 chr6 142349998 Intergenic 7 198101 CEU:0.928;0.805 FUNCTIONAL_SNP rs9496232 chr6 142350078 Intergenic 7 198021 CEU:0.928;0.805 FUNCTIONAL_SNP rs225719 chr6 142549787 Intergenic 7 1688 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.741, YRI:1.0;1.0 FUNCTIONAL_SNP rs4541765 chr6 142360709 Intergenic 7 187390 CEU:0.928;0.805 FUNCTIONAL_SNP rs225735 chr6 142557418 Intergenic 7 9319 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs225736 chr6 142560685 Intergenic 7 12586 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs4128460 chr6 142355986 Intergenic 7 192113 CEU:0.928;0.805 FUNCTIONAL_SNP rs7749578 chr6 142425552 Intergenic 7 122547 CEU:1.0;0.933 FUNCTIONAL_SNP rs225625 chr6 142472155 Intron 7 75944 CEU:1.0;1.0, CHB:1.0;0.528 FUNCTIONAL_SNP rs225626 chr6 142472294 Intron 7 75805 CEU:1.0;1.0, CHB:1.0;0.528 FUNCTIONAL_SNP rs225627 chr6 142472366 Intron 7 75733 CEU:1.0;1.0, CHB:1.0;0.787 FUNCTIONAL_SNP rs225638 chr6 142479133 Intron 7 68966 CEU:1.0;1.0, CHB:1.0;0.528 FUNCTIONAL_SNP rs225647 chr6 142483643 Intron 7 64456 CEU:1.0;1.0, CHB:1.0;0.528 FUNCTIONAL_SNP rs225649 chr6 142483742 Intron 7 64357 CEU:1.0;1.0, CHB:1.0;0.528 FUNCTIONAL_SNP rs12210427 chr6 142389281 Intron 7 158818 CEU:1.0;0.933 LEAD_SNP rs6570507 chr6 142679572 Intron 7 ASSOCIATION 20397748 Height 6.69897000434 GPR126 ASSOCIATION 19343178 Height 10.3979400087 GPR126 FUNCTIONAL_SNP rs7776375 chr6 142777064 Intergenic 4 97492 CEU:1.0;0.838, CHB:1.0;0.949, JPT:1.0;0.805 FUNCTIONAL_SNP rs7774095 chr6 142670862 Intron 4 8710 CEU:1.0;0.943, CHB:1.0;0.899, JPT:1.0;0.773 FUNCTIONAL_SNP rs2294764 chr6 142737504 Intron 4 57932 CEU:1.0;0.89, CHB:1.0;0.901, JPT:1.0;0.773 FUNCTIONAL_SNP rs262121 chr6 142839498 Intergenic 4 159926 CEU:0.939;0.831, CHB:0.944;0.768, JPT:0.861;0.543 FUNCTIONAL_SNP rs262129 chr6 142853144 Intron 4 173572 CEU:0.939;0.831, CHB:0.889;0.75, JPT:0.861;0.543 FUNCTIONAL_SNP rs263184 chr6 142862022 Intron 5a 182450 CEU:0.94;0.883, CHB:0.944;0.768, JPT:0.861;0.543 FUNCTIONAL_SNP rs7756305 chr6 142670955 Intron 5a 8617 CEU:1.0;0.89, CHB:1.0;0.862, JPT:1.0;0.655 FUNCTIONAL_SNP rs9389985 chr6 142653898 Intron 5a 25674 CEU:0.929;0.806, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7755109 chr6 142750392 Intron 5a 70820 CEU:1.0;0.843, CHB:1.0;0.953, JPT:1.0;0.773 FUNCTIONAL_SNP rs962554 chr6 142734204 Intron 5a 54632 CEU:1.0;0.843, CHB:1.0;0.953, JPT:1.0;0.773 FUNCTIONAL_SNP rs1891308 chr6 142648235 Intron 5b 31337 CEU:1.0;1.0, CHB:1.0;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs263178 chr6 142865106 Intron 5b 185534 CEU:0.94;0.883, CHB:0.944;0.768, JPT:0.854;0.505 FUNCTIONAL_SNP rs263179 chr6 142863888 Intron 5b 184316 CEU:0.937;0.828, CHB:0.944;0.768, JPT:0.868;0.582 FUNCTIONAL_SNP rs6929442 chr6 142742659 Intron 5b 63087 CEU:1.0;0.829, CHB:0.95;0.903, JPT:1.0;0.802 FUNCTIONAL_SNP rs1040526 chr6 142735816 Intron 5b 56244 CEU:1.0;0.89, CHB:1.0;0.953, JPT:1.0;0.773 FUNCTIONAL_SNP rs611802 chr6 142866387 Intron 5b 186815 CEU:0.939;0.831, CHB:0.892;0.72, JPT:0.854;0.505 FUNCTIONAL_SNP rs2050157 chr6 142658162 Intron 5b 21410 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs155259 chr6 142846565 Intergenic 5b 166993 CEU:0.94;0.883, CHB:0.944;0.768, JPT:0.861;0.543 FUNCTIONAL_SNP rs1040525 chr6 142703669 Intron 6 24097 CEU:1.0;0.94, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs9496346 chr6 142669338 Intron 6 10234 CEU:1.0;0.837, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6570509 chr6 142716286 Intron 6 36714 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1418201 chr6 142648056 Intron 6 31516 CEU:1.0;0.89, CHB:1.0;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs3748069 chr6 142767633 Intergenic 6 88061 CEU:1.0;0.843, CHB:1.0;0.953, JPT:1.0;0.773 FUNCTIONAL_SNP rs262119 chr6 142842793 Intergenic 6 163221 CEU:0.939;0.831, CHB:0.944;0.768, JPT:0.861;0.543 FUNCTIONAL_SNP rs263182 chr6 142862612 Intron 7 183040 CEU:0.938;0.83, CHB:0.944;0.768, JPT:0.861;0.543 FUNCTIONAL_SNP rs263183 chr6 142862181 Intron 7 182609 CEU:0.94;0.883, CHB:0.939;0.686 FUNCTIONAL_SNP rs263188 chr6 142860028 Intron 7 180456 CEU:0.94;0.883, CHB:0.944;0.768, JPT:0.861;0.543 FUNCTIONAL_SNP rs6909857 chr6 142701158 Intron 7 21586 CEU:1.0;0.886, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs2039986 chr6 142655238 Intron 7 24334 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2039987 chr6 142655490 Intron 7 24082 CEU:0.934;0.872, CHB:1.0;0.859, JPT:1.0;0.685 FUNCTIONAL_SNP rs972982 chr6 142666861 Intron 7 12711 CEU:1.0;0.89, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs9373346 chr6 142746992 Intron 7 67420 CEU:1.0;1.0, CHB:0.951;0.904, JPT:1.0;0.808 FUNCTIONAL_SNP rs6570510 chr6 142755024 Intron 7 75452 CEU:1.0;1.0, CHB:0.95;0.903, JPT:1.0;0.755 FUNCTIONAL_SNP rs1360194 chr6 142752595 Intron 7 73023 CEU:1.0;0.89, CHB:1.0;0.953, JPT:1.0;0.773 FUNCTIONAL_SNP rs4896582 chr6 142703877 Intron 7 24305 CEU:1.0;0.882 FUNCTIONAL_SNP rs6937121 chr6 142707133 Intron 7 27561 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9399401 chr6 142668901 Intron 7 10671 CEU:1.0;0.89, CHB:1.0;0.859, JPT:1.0;0.655 FUNCTIONAL_SNP rs9403383 chr6 142694049 Intron 7 14477 CEU:1.0;0.943, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs9389986 chr6 142661114 Intron 7 18458 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs262114 chr6 142818218 Intergenic 7 138646 CEU:0.94;0.883, CHB:0.944;0.768, JPT:0.861;0.543 FUNCTIONAL_SNP rs1342060 chr6 142663177 Intron 7 16395 CEU:1.0;0.89, CHB:1.0;0.862, JPT:1.0;0.655 FUNCTIONAL_SNP rs9403381 chr6 142661156 Intron 7 18416 CEU:1.0;1.0, CHB:1.0;0.862, JPT:1.0;0.655 FUNCTIONAL_SNP rs7763064 chr6 142797289 Intergenic 7 117717 CEU:1.0;0.943, CHB:1.0;0.862, JPT:0.928;0.597 LEAD_SNP rs4896582 chr6 142703877 Intron 7 ASSOCIATION 18391950 Height 17.6989700043 GPR126 LEAD_SNP rs3817928 chr6 142750516 Intron 3a ASSOCIATION 20010835 Pulmonary function 9.0 GPR126 FUNCTIONAL_SNP rs11155242 chr6 142691549 Coding 6 58967 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.846 FUNCTIONAL_SNP rs2294775 chr6 142766347 Exon,non-coding 4 15831 CEU:1.0;0.927, CHB:1.0;0.911, JPT:1.0;1.0, YRI:0.939;0.788 FUNCTIONAL_SNP rs6900087 chr6 142717303 Intron 2b 33213 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs6925979 chr6 142651052 Intron 3a 99464 CEU:1.0;0.846, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs7776356 chr6 142777029 Intergenic 4 26513 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:0.938;0.828 FUNCTIONAL_SNP rs6900233 chr6 142717283 Intron 4 33233 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs12197866 chr6 142706063 Intron 4 44453 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7757571 chr6 142702589 Intron 5a 47927 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs1928528 chr6 142779109 Intergenic 5b 28593 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs12213892 chr6 142702234 Intron 6 48282 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6922607 chr6 142703483 Intron 6 47033 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.659 FUNCTIONAL_SNP rs6903424 chr6 142699948 Intron 7 50568 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs643975 chr6 142844251 Intergenic 7 93735 CEU:1.0;0.847, CHB:1.0;0.834, JPT:1.0;1.0, YRI:0.819;0.633 FUNCTIONAL_SNP rs7765770 chr6 142687305 Intron 7 63211 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.846 FUNCTIONAL_SNP rs6570511 chr6 142757368 Intron 7 6852 CEU:1.0;0.923, CHB:1.0;0.911, JPT:1.0;1.0, YRI:0.936;0.635 FUNCTIONAL_SNP rs9321870 chr6 142800758 Intergenic 7 50242 CEU:0.922;0.849, YRI:1.0;0.942 FUNCTIONAL_SNP rs9373347 chr6 142779885 Intergenic 7 29369 CEU:1.0;1.0, CHB:1.0;0.752, JPT:1.0;0.694 FUNCTIONAL_SNP rs12664563 chr6 142785201 Intergenic 7 34685 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs11759653 chr6 142720354 Intron 7 30162 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs12190271 chr6 142681409 Intron 7 69107 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.846 FUNCTIONAL_SNP rs6906468 chr6 142769386 Intergenic 7 18870 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:0.939;0.788 FUNCTIONAL_SNP rs17071756 chr6 142715195 Intron 7 35321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.659 FUNCTIONAL_SNP rs10484733 chr6 142710988 Intron 7 39528 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 LEAD_SNP rs3748069 chr6 142767633 Intergenic 6 ASSOCIATION 18391951 Height 13.3010299957 GPR126 FUNCTIONAL_SNP rs7776375 chr6 142777064 Intergenic 4 9431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2294764 chr6 142737504 Intron 4 30129 CEU:1.0;0.946, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.922 FUNCTIONAL_SNP rs7755109 chr6 142750392 Intron 5a 17241 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.925 FUNCTIONAL_SNP rs962554 chr6 142734204 Intron 5a 33429 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs6929442 chr6 142742659 Intron 5b 24974 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.91 FUNCTIONAL_SNP rs1040526 chr6 142735816 Intron 5b 31817 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.925 FUNCTIONAL_SNP rs6570510 chr6 142755024 Intron 7 12609 CEU:1.0;0.831, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1360194 chr6 142752595 Intron 7 15038 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.925 FUNCTIONAL_SNP rs3817929 chr6 142751062 Intron 7 16571 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.884 LEAD_SNP rs9496398 chr6 142822217 Intergenic 7 ASSOCIATION 21507922 Neutrophil count 5.39794000867 GPR126 - HIVEP2 LEAD_SNP rs9390459 chr6 147680359 Coding 5b ASSOCIATION 20231535 Plasma coagulation factors 22.0 STXBP5 FUNCTIONAL_SNP rs1039084 chr6 147635413 Coding 5b 44946 CEU:0.958;0.847, CHB:1.0;1.0, JPT:1.0;0.884 FUNCTIONAL_SNP rs620715 chr6 147570239 Intron 3a 110120 CEU:0.958;0.847, CHB:1.0;0.942, JPT:1.0;0.948, YRI:1.0;0.576 FUNCTIONAL_SNP rs1147846 chr6 147609376 Intron 4 70983 CEU:0.958;0.847, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs4896905 chr6 147671994 Intron 4 8365 CEU:1.0;0.815 FUNCTIONAL_SNP rs2582929 chr6 147618697 Intron 5a 61662 CEU:0.957;0.844, CHB:0.931;0.813, JPT:1.0;0.948 FUNCTIONAL_SNP rs580657 chr6 147571835 Intron 5a 108524 CEU:0.958;0.847, CHB:1.0;0.94, JPT:1.0;0.945 FUNCTIONAL_SNP rs614476 chr6 147606007 Intron 5a 74352 CEU:0.958;0.847, CHB:1.0;0.942, JPT:1.0;0.948 FUNCTIONAL_SNP rs591355 chr6 147590716 Intron 5a 89643 CEU:0.957;0.844, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.556 FUNCTIONAL_SNP rs597631 chr6 147591022 Intron 5a 89337 CEU:0.958;0.847, CHB:1.0;0.942, JPT:1.0;0.947, YRI:1.0;0.549 FUNCTIONAL_SNP rs7762087 chr6 147633713 Intron 5b 46646 CEU:0.958;0.847, CHB:0.934;0.82, JPT:1.0;1.0 FUNCTIONAL_SNP rs2502732 chr6 147576423 Intron 5b 103936 CEU:0.958;0.847, CHB:1.0;0.942, JPT:1.0;0.948 FUNCTIONAL_SNP rs12527235 chr6 147665722 Intron 5b 14637 CEU:0.958;0.847, CHB:1.0;0.942, JPT:1.0;0.948, YRI:0.912;0.619 FUNCTIONAL_SNP rs6932613 chr6 147666717 Intron 6 13642 CEU:0.959;0.883, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs4896906 chr6 147679316 Intron 6 1043 CEU:1.0;0.806, CHB:1.0;0.827, JPT:1.0;0.8, YRI:1.0;0.606 FUNCTIONAL_SNP rs4896907 chr6 147679631 Intron 6 728 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs9377048 chr6 147633119 Intron 6 47240 CEU:0.956;0.841, CHB:1.0;0.939, JPT:1.0;1.0 FUNCTIONAL_SNP rs9399599 chr6 147703299 Intron 6 22940 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;0.948, YRI:0.956;0.679 FUNCTIONAL_SNP rs2786187 chr6 147554226 Intron 6 126133 CEU:0.957;0.81, CHB:1.0;0.942, JPT:0.947;0.896 FUNCTIONAL_SNP rs1992389 chr6 147634119 Intron 6 46240 CEU:0.957;0.844, CHB:0.934;0.82, JPT:1.0;0.948 FUNCTIONAL_SNP rs659399 chr6 147615710 Intron 6 64649 CEU:0.957;0.845, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.691 FUNCTIONAL_SNP rs995697 chr6 147677894 Intron 6 2465 CEU:1.0;0.815 FUNCTIONAL_SNP rs12191720 chr6 147670086 Intron 6 10273 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9390458 chr6 147668514 Intron 6 11845 CEU:1.0;0.815, JPT:1.0;0.527 FUNCTIONAL_SNP rs619626 chr6 147590408 Intron 6 89951 CEU:0.958;0.847, CHB:1.0;0.942, JPT:1.0;0.948 FUNCTIONAL_SNP rs9386182 chr6 147691069 Intron 7 10710 CEU:1.0;0.887 FUNCTIONAL_SNP rs2786183 chr6 147619190 Intron 7 61169 CEU:0.958;0.847, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.667 FUNCTIONAL_SNP rs584456 chr6 147617313 Intron 7 63046 CEU:0.958;0.847, CHB:1.0;0.839, JPT:1.0;1.0 FUNCTIONAL_SNP rs7765526 chr6 147713764 Intergenic 7 33405 CEU:1.0;0.887, CHB:1.0;0.882, JPT:1.0;1.0, YRI:0.95;0.57 FUNCTIONAL_SNP rs6928919 chr6 147631201 Intron 7 49158 CEU:0.958;0.847, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs9497759 chr6 147686274 Intron 7 5915 CEU:1.0;0.885 FUNCTIONAL_SNP rs1147847 chr6 147610720 Intron 7 69639 CEU:0.958;0.847, CHB:1.0;0.939, JPT:1.0;1.0 FUNCTIONAL_SNP rs2047286 chr6 147675071 Intron 7 5288 CEU:1.0;0.815 FUNCTIONAL_SNP rs2786185 chr6 147595554 Intron 7 84805 CEU:0.958;0.847, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.556 FUNCTIONAL_SNP rs12199542 chr6 147670601 Intron 7 9758 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;0.948 FUNCTIONAL_SNP rs9403852 chr6 147684318 Intron 7 3959 CEU:1.0;0.885 FUNCTIONAL_SNP rs1496033 chr6 147671833 Intron 7 8526 CEU:1.0;0.815 FUNCTIONAL_SNP rs618474 chr6 147578833 Intron 7 101526 CEU:0.958;0.847, CHB:1.0;0.942, JPT:1.0;0.948 FUNCTIONAL_SNP rs9390461 chr6 147701217 Intron 7 20858 CEU:1.0;0.887 LEAD_SNP rs9373523 chr6 147701133 Intron 6 ASSOCIATION 20694014 Tuberculosis 6.0 STXBP5 FUNCTIONAL_SNP rs9390462 chr6 147701221 Intron 7 88 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.942 LEAD_SNP rs9390537 chr6 148423371 Intergenic 5b ASSOCIATION term=200 Alzheimer's disease 5.09691001301 SAMD5 - SASH1 LEAD_SNP rs9497975 chr6 148547802 Intergenic 7 ASSOCIATION 20041166 HIV-1 control 7.15490195999 SAMD5 - SASH1 LEAD_SNP rs6930576 chr6 148704954 Intron 7 ASSOCIATION 21150874 Diabetic nephropathy 6.15490195999 SASH1 FUNCTIONAL_SNP rs10457832 chr6 148707493 Intron 7 2539 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.808 LEAD_SNP rs6930337 chr6 148788006 Intron 6 ASSOCIATION 18464913 Protein quantitative trait loci 6.0 SASH1 LEAD_SNP rs2500535 chr6 149329267 Intron 5b ASSOCIATION 20360315 Response to antidepressants 5.04575749056 UST ASSOCIATION 20360315 Response to antidepressants 7.39794000867 UST FUNCTIONAL_SNP rs2486416 chr6 149336009 Intron 2b 6742 CEU:1.0;1.0, CHB:0.948;0.898, JPT:1.0;1.0 FUNCTIONAL_SNP rs2486404 chr6 149311607 Intron 5a 17660 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.93 FUNCTIONAL_SNP rs6899672 chr6 149237368 Intron 5a 91899 CEU:1.0;1.0 FUNCTIONAL_SNP rs2486403 chr6 149313157 Intron 5b 16110 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs2486397 chr6 149320682 Intron 5b 8585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.928;0.862, YRI:1.0;1.0 FUNCTIONAL_SNP rs2486398 chr6 149318799 Intron 5b 10468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.928;0.862 FUNCTIONAL_SNP rs2486402 chr6 149314291 Intron 7 14976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs2500525 chr6 149312334 Intron 7 16933 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs2486390 chr6 149324196 Intron 7 5071 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2486396 chr6 149321746 Intron 7 7521 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;1.0 FUNCTIONAL_SNP rs2500530 chr6 149320283 Intron 7 8984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933 LEAD_SNP rs7772697 chr6 149435111 Intergenic 5a ASSOCIATION 21441570 Diabetic retinopathy 5.52287874528 UST - TAB2 LEAD_SNP rs636864 chr6 149525606 Intergenic 7 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.22184874962 UST - TAB2 LEAD_SNP rs727979 chr6 149593920 Intron 7 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.09691001301 UST - TAB2 FUNCTIONAL_SNP rs6914750 chr6 149582942 Intron 6 10978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9377203 chr6 149582560 Intron 7 11360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9377206 chr6 149604134 Intron 7 10214 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.815 FUNCTIONAL_SNP rs4897101 chr6 149581692 Intron 7 12228 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12660316 chr6 149585199 Intron 7 8721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1853665 chr6 150298842 Intergenic 7 ASSOCIATION 20923822 Radiation response 5.15490195999 ULBP1 - RAET1J FUNCTIONAL_SNP rs9383993 chr6 150299299 Exon,non-coding 7 457 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9478311 chr6 150287135 Intron 5b 11707 CEU:1.0;0.933 FUNCTIONAL_SNP rs17676204 chr6 150283812 Intergenic 5b 15030 CEU:1.0;0.86 LEAD_SNP rs9479482 chr6 150358012 Intergenic 6 ASSOCIATION 20596022 Alopecia areata 18.3979400087 RAET1M - PHBP1 FUNCTIONAL_SNP rs9478380 chr6 150354665 Intergenic 4 3347 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9479403 chr6 150337746 Intergenic 4 20266 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9479405 chr6 150338065 Intergenic 4 19947 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11754987 chr6 150351204 Intergenic 4 6808 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9478354 chr6 150334366 Intergenic 5a 23646 CEU:1.0;1.0, CHB:0.93;0.81, JPT:1.0;0.941, YRI:1.0;0.787 FUNCTIONAL_SNP rs11757186 chr6 150344374 Intron 5b 13638 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939 FUNCTIONAL_SNP rs13198863 chr6 150350781 Intergenic 5b 7231 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13218129 chr6 150341540 Intron 5b 16472 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.916;0.719 FUNCTIONAL_SNP rs13209192 chr6 150350099 Intergenic 5b 7913 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9479481 chr6 150357944 Intergenic 6 68 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3860823 chr6 150356526 Intergenic 6 1486 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs563278 chr6 150364427 Intergenic 7 6415 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs9479513 chr6 150367320 Intergenic 7 9308 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs9478362 chr6 150340526 Intron 7 17486 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5017316 chr6 150333489 Intergenic 7 24523 CEU:1.0;1.0, CHB:0.93;0.81, JPT:1.0;1.0 FUNCTIONAL_SNP rs11155696 chr6 150357283 Intergenic 7 729 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1591830 chr6 150651900 Intergenic 6 ASSOCIATION 19043545 Serum metabolites 7.0 RNU4-7P - IYD FUNCTIONAL_SNP rs9397277 chr6 150649726 Intergenic 7 2174 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 LEAD_SNP rs9372078 chr6 150913961 Intergenic 4 ASSOCIATION 19165232 Panic disorder 6.30102999566 IYD - PLEKHG1 LEAD_SNP rs11754661 chr6 151207078 Intron 7 ASSOCIATION 20885792 Alzheimer's disease (late onset) 9.69897000434 MTHFD1L LEAD_SNP rs6922269 chr6 151252985 Intron 7 ASSOCIATION 17634449 Coronary heart disease 7.52287874528 MTHFD1L FUNCTIONAL_SNP rs6922248 chr6 151252962 Intron 7 23 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6907487 chr6 151252999 Intron 7 14 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1474787 chr6 151253382 Intron 7 397 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4870044 chr6 151901409 Intron 5b ASSOCIATION 18445777 Bone mineral density (hip) 6.69897000434 C6orf97 ASSOCIATION 18445777 Bone mineral density (spine) 10.6989700043 C6orf97 FUNCTIONAL_SNP rs4869739 chr6 151901802 Intron 7 393 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 LEAD_SNP rs4869742 chr6 151907748 Intron 6 ASSOCIATION 21540461 Chronic myeloid leukemia 5.69897000434 C6orf97 FUNCTIONAL_SNP rs6925996 chr6 151910904 Intron 4 3156 CEU:1.0;0.958, CHB:0.934;0.872, JPT:1.0;0.812 FUNCTIONAL_SNP rs4870044 chr6 151901409 Intron 5b 6339 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.698 FUNCTIONAL_SNP rs4869741 chr6 151906293 Intron 6 1455 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.531 FUNCTIONAL_SNP rs7743432 chr6 151912507 Intron 7 4759 CEU:0.951;0.862, CHB:0.927;0.859, JPT:1.0;0.811 FUNCTIONAL_SNP rs4869739 chr6 151901802 Intron 7 5946 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.815 FUNCTIONAL_SNP rs9383929 chr6 151911872 Intron 7 4124 CEU:1.0;0.899, CHB:0.911;0.831, JPT:1.0;0.741 LEAD_SNP rs3757318 chr6 151914113 Intron 4 ASSOCIATION 20453838 Breast cancer 5.52287874528 C6orf97 FUNCTIONAL_SNP rs3734805 chr6 151939350 Exon,non-coding 7 25237 CEU:1.0;0.848, CHB:0.824;0.611 FUNCTIONAL_SNP rs9383589 chr6 151940260 Exon,non-coding 7 26147 CEU:1.0;0.848, CHB:0.824;0.611 FUNCTIONAL_SNP rs9383935 chr6 151939848 Exon,non-coding 6 25735 CEU:1.0;0.848, CHB:0.824;0.611 FUNCTIONAL_SNP rs17081488 chr6 151925783 Intron 3a 11670 CEU:1.0;0.848, CHB:0.829;0.652, JPT:1.0;0.777, YRI:1.0;1.0 FUNCTIONAL_SNP rs12663501 chr6 151929925 Intron 4 15812 CEU:1.0;0.848, YRI:1.0;1.0 FUNCTIONAL_SNP rs1110776 chr6 151924607 Intron 4 10494 CEU:1.0;1.0, CHB:0.823;0.642, JPT:1.0;0.857, YRI:1.0;1.0 FUNCTIONAL_SNP rs12663827 chr6 151930249 Intron 5b 16136 CEU:1.0;1.0, CHB:0.823;0.642, JPT:1.0;0.849, YRI:1.0;1.0 FUNCTIONAL_SNP rs12665607 chr6 151946629 Intergenic 6 32516 CEU:1.0;0.848, CHB:0.821;0.606 FUNCTIONAL_SNP rs12662670 chr6 151918856 Intron 6 4743 CEU:1.0;1.0, CHB:0.829;0.652, JPT:1.0;0.652, YRI:1.0;1.0 FUNCTIONAL_SNP rs9383936 chr6 151944614 Intergenic 7 30501 CEU:1.0;0.848, CHB:0.769;0.561 LEAD_SNP rs1038304 chr6 151933175 Intron 6 ASSOCIATION 19079262 Bone mineral density (hip) 9.39794000867 C6orf97 ASSOCIATION 18445777 Bone mineral density (hip) 8.30102999566 C6orf97 ASSOCIATION 18445777 Bone mineral density (spine) 10.3979400087 C6orf97 FUNCTIONAL_SNP rs1023940 chr6 151932778 Intron 6 397 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;0.934 LEAD_SNP rs6929137 chr6 151936677 Coding 7 ASSOCIATION 19079262 Bone mineral density (spine) 9.69897000434 C6orf97 LEAD_SNP rs3734805 chr6 151939350 Exon,non-coding 7 ASSOCIATION 21263130 Breast cancer 7.0 C6orf97 FUNCTIONAL_SNP rs9383589 chr6 151940260 Exon,non-coding 7 910 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.935, YRI:1.0;0.589 FUNCTIONAL_SNP rs9383935 chr6 151939848 Exon,non-coding 6 498 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3757318 chr6 151914113 Intron 4 25237 CEU:1.0;0.848, CHB:0.824;0.611 FUNCTIONAL_SNP rs9397068 chr6 151953859 Intergenic 4 14509 CEU:1.0;0.824, CHB:1.0;0.884, JPT:0.921;0.848 FUNCTIONAL_SNP rs1110776 chr6 151924607 Intron 4 14743 CEU:1.0;0.824, CHB:0.944;0.845, JPT:0.841;0.614 FUNCTIONAL_SNP rs9383937 chr6 151957119 Intergenic 5b 17769 CEU:1.0;0.825, CHB:1.0;1.0, JPT:0.928;0.861, YRI:1.0;1.0 FUNCTIONAL_SNP rs12663827 chr6 151930249 Intron 5b 9101 CEU:1.0;0.848, CHB:0.944;0.845, JPT:0.833;0.598 FUNCTIONAL_SNP rs9397435 chr6 151951220 Intergenic 5b 11870 CEU:1.0;0.825, CHB:1.0;1.0, JPT:0.931;0.867, YRI:1.0;0.534 FUNCTIONAL_SNP rs9397437 chr6 151952332 Intergenic 5b 12982 CEU:1.0;0.825, CHB:1.0;1.0, JPT:0.931;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs12665607 chr6 151946629 Intergenic 6 7279 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.931;0.867 FUNCTIONAL_SNP rs12662670 chr6 151918856 Intron 6 20494 CEU:1.0;0.848, CHB:0.946;0.849, JPT:0.776;0.528 FUNCTIONAL_SNP rs9383936 chr6 151944614 Intergenic 7 5264 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.933, YRI:1.0;0.589 FUNCTIONAL_SNP rs9397436 chr6 151952002 Intergenic 7 12652 CEU:1.0;0.825, CHB:1.0;1.0, JPT:0.931;0.867, YRI:1.0;0.534 LEAD_SNP rs2046210 chr6 151948366 Intergenic 6 ASSOCIATION 19219042 Breast cancer 14.6989700043 C6orf97 - ESR1 FUNCTIONAL_SNP rs6557161 chr6 151950235 Intergenic 6 1869 CEU:0.953;0.868, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2941740 chr6 152009638 Intergenic 6 ASSOCIATION 19801982 Bone mineral density (hip) 9.69897000434 ESR1 FUNCTIONAL_SNP rs851983 chr6 152024415 Intron 4 14777 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.88 FUNCTIONAL_SNP rs851984 chr6 152023191 Intron 4 13553 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;0.886 FUNCTIONAL_SNP rs2982571 chr6 152012739 Intron 4 3101 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.76 FUNCTIONAL_SNP rs3020331 chr6 152008780 Intergenic 5b 858 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;0.774 FUNCTIONAL_SNP rs851985 chr6 152020390 Intron 5b 10752 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.88 FUNCTIONAL_SNP rs3020332 chr6 152008924 Intergenic 5b 714 CEU:1.0;0.889, CHB:1.0;0.722, JPT:0.937;0.827, YRI:1.0;0.511 FUNCTIONAL_SNP rs862346 chr6 152016369 Intron 5b 6731 CEU:0.918;0.811, CHB:1.0;0.722, JPT:0.937;0.827 FUNCTIONAL_SNP rs1293935 chr6 152017958 Intron 6 8320 CEU:0.914;0.8, CHB:1.0;0.553, JPT:0.873;0.761 FUNCTIONAL_SNP rs851982 chr6 152024985 Intron 7 15347 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.88 FUNCTIONAL_SNP rs3020334 chr6 152012956 Intron 7 3318 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.734 FUNCTIONAL_SNP rs851996 chr6 152016803 Intron 7 7165 CEU:0.918;0.811, CHB:1.0;0.722, JPT:0.936;0.826 FUNCTIONAL_SNP rs3020335 chr6 152013223 Intron 7 3585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.866;0.618 FUNCTIONAL_SNP rs2982570 chr6 152013748 Intron 7 4110 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.76 FUNCTIONAL_SNP rs2941741 chr6 152008982 Intergenic 7 656 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.882 FUNCTIONAL_SNP rs2982573 chr6 152010534 Intergenic 7 896 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3020333 chr6 152010254 Intergenic 7 616 CEU:1.0;0.882, CHB:1.0;0.601, JPT:1.0;0.886, YRI:1.0;0.565 LEAD_SNP rs1999805 chr6 152068364 Intron 5b ASSOCIATION 18445777 Bone mineral density (spine) 7.69897000434 ESR1 FUNCTIONAL_SNP rs1415194 chr6 152063998 Intron 6 4366 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs1856057 chr6 152067869 Intron 7 495 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2504063 chr6 152090707 Intron 7 ASSOCIATION 19801982 Bone mineral density (spine) 10.2218487496 ESR1 FUNCTIONAL_SNP rs2504071 chr6 152084862 Intron 2b 5845 CEU:1.0;0.96, CHB:0.935;0.821, JPT:1.0;0.787 LEAD_SNP rs543650 chr6 152110943 Intron 7 ASSOCIATION 20881960 Height 17.0 ESR1 LEAD_SNP rs6902771 chr6 152157881 Intron 6 ASSOCIATION 19581569 Alcohol dependence 5.09691001301 ESR1 FUNCTIONAL_SNP rs9479130 chr6 152168456 Intron 4 10575 CEU:1.0;0.96, CHB:1.0;0.865, JPT:0.946;0.851, YRI:1.0;0.831 FUNCTIONAL_SNP rs827423 chr6 152156197 Intron 6 1684 CEU:0.958;0.849, CHB:0.946;0.773, JPT:0.946;0.851 FUNCTIONAL_SNP rs4870056 chr6 152162227 Intron 6 4346 CEU:1.0;0.923, CHB:1.0;0.857, JPT:0.946;0.851, YRI:0.799;0.615 FUNCTIONAL_SNP rs9397448 chr6 152161066 Intron 6 3185 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs7739085 chr6 152164548 Intron 6 6667 CEU:1.0;0.961, CHB:1.0;0.823, JPT:0.946;0.851, YRI:1.0;0.831 FUNCTIONAL_SNP rs9322332 chr6 152166801 Intron 6 8920 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.824 FUNCTIONAL_SNP rs827421 chr6 152157122 Intron 7 759 CEU:0.958;0.849, CHB:0.943;0.733, JPT:0.949;0.9 FUNCTIONAL_SNP rs3853250 chr6 152159900 Intron 7 2019 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs3853252 chr6 152170247 Intron 7 12366 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.827 FUNCTIONAL_SNP rs2234693 chr6 152163335 Intron 7 5454 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.831 FUNCTIONAL_SNP rs9383593 chr6 152159626 Intron 7 1745 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.828 LEAD_SNP rs2982694 chr6 152285687 Intron 5a ASSOCIATION 21658281 Sudden cardiac arrest 9.15490195999 ESR1 FUNCTIONAL_SNP rs2982689 chr6 152285152 Intron 6 535 CEU:1.0;0.899, CHB:1.0;0.636, JPT:1.0;0.611 FUNCTIONAL_SNP rs2982690 chr6 152285491 Intron 6 196 CEU:1.0;0.899, CHB:1.0;0.636, JPT:1.0;0.611 FUNCTIONAL_SNP rs2982699 chr6 152286130 Intron 6 443 CEU:1.0;0.899, CHB:1.0;0.598, JPT:1.0;0.549 FUNCTIONAL_SNP rs2982700 chr6 152286523 Intron 6 836 CEU:1.0;0.899, CHB:1.0;0.606, JPT:1.0;0.53 FUNCTIONAL_SNP rs1884049 chr6 152287367 Intron 7 1680 CEU:1.0;0.815 FUNCTIONAL_SNP rs1884050 chr6 152287395 Intron 7 1708 CEU:1.0;0.899, CHB:1.0;0.606, JPT:1.0;0.53 FUNCTIONAL_SNP rs1884052 chr6 152291366 Intron 7 5679 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2982738 chr6 152292345 Intron 7 6658 CEU:1.0;1.0, CHB:1.0;0.899, JPT:1.0;0.948, YRI:1.0;0.66 FUNCTIONAL_SNP rs985694 chr6 152286625 Intron 7 938 CEU:1.0;0.899, CHB:1.0;0.606, JPT:1.0;0.53 FUNCTIONAL_SNP rs2347872 chr6 152292672 Intron 7 6985 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs932479 chr6 152288037 Intron 7 2350 CEU:1.0;0.899, CHB:1.0;0.606, JPT:1.0;0.53 LEAD_SNP rs17082664 chr6 152738754 Intron 7 ASSOCIATION 20351715 Bipolar disorder and major depressive disorder (combined) 6.0 SYNE1 ASSOCIATION 18711365 Bipolar disorder 5.39794000867 SYNE1 FUNCTIONAL_SNP rs9479307 chr6 152711045 Intron 6 27709 CEU:1.0;1.0, CHB:1.0;0.797, JPT:0.912;0.666 FUNCTIONAL_SNP rs9479313 chr6 152744750 Intron 6 5996 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.93 FUNCTIONAL_SNP rs9479314 chr6 152747321 Intron 6 8567 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.931 FUNCTIONAL_SNP rs7738528 chr6 152738335 Intron 6 419 CEU:1.0;1.0, CHB:0.924;0.703, JPT:1.0;0.923 FUNCTIONAL_SNP rs1489586 chr6 152732257 Intron 6 6497 CEU:1.0;1.0, CHB:1.0;0.758, JPT:1.0;0.931 FUNCTIONAL_SNP rs2092602 chr6 152737092 Intron 6 1662 CEU:1.0;1.0, CHB:0.931;0.688, JPT:1.0;0.928, YRI:1.0;0.628 FUNCTIONAL_SNP rs761408 chr6 152736812 Intron 6 1942 CEU:1.0;1.0, CHB:0.934;0.701, JPT:1.0;0.931, YRI:1.0;0.647 FUNCTIONAL_SNP rs12526147 chr6 152765201 Intron 6 26447 CEU:1.0;0.822, CHB:1.0;0.945, JPT:1.0;0.93, YRI:0.805;0.521 FUNCTIONAL_SNP rs9479316 chr6 152758033 Intron 7 19279 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.931, YRI:1.0;0.502 FUNCTIONAL_SNP rs12661143 chr6 152752260 Intron 7 13506 CEU:1.0;0.876, CHB:1.0;1.0, JPT:1.0;0.924 FUNCTIONAL_SNP rs6915736 chr6 152762098 Intron 7 23344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933 FUNCTIONAL_SNP rs6557219 chr6 152743448 Intron 7 4694 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.933 FUNCTIONAL_SNP rs6935362 chr6 152753254 Intron 7 14500 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs6913500 chr6 152744007 Intron 7 5253 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.933 FUNCTIONAL_SNP rs6909684 chr6 152746133 Intron 7 7379 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933 LEAD_SNP rs7747960 chr6 152791474 Intron 6 ASSOCIATION 21738484 Bipolar disorder 5.04575749056 SYNE1 FUNCTIONAL_SNP rs2295041 chr6 152773194 Intron 6 18280 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9371600 chr6 152790533 Intron 6 941 CEU:1.0;0.918, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.838 FUNCTIONAL_SNP rs9397105 chr6 152772494 Intron 6 18980 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1322512 chr6 152947953 Intron 7 ASSOCIATION 17903302 Tonometry 5.09691001301 SYNE1 FUNCTIONAL_SNP rs1631457 chr6 152946514 Intron 5b 1439 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7765586 chr6 152949109 Intron 7 1156 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs675026 chr6 154414563 Coding 5b ASSOCIATION 21347282 Coronary heart disease 5.30102999566 OPRM1 LEAD_SNP rs35229355 chr6 155929801 Intergenic 7 ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 5.30102999566 NOX3 - TRNAV37P FUNCTIONAL_SNP rs6927787 chr6 155927459 Intergenic 7 2342 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9478751 chr6 157441050 Intron 4 ASSOCIATION 21294900 Serum uric acid 5.52287874528 ARID1B FUNCTIONAL_SNP rs6941159 chr6 157439638 Intron 7 1412 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.819 FUNCTIONAL_SNP rs9480441 chr6 157439261 Intron 7 1789 CEU:0.917;0.841, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 LEAD_SNP rs1738074 chr6 159465977 Exon,non-coding 4 ASSOCIATION 20190752 Celiac disease 14.5228787453 TAGAP ASSOCIATION 18311140 Celiac disease 7.15490195999 TAGAP FUNCTIONAL_SNP rs182429 chr6 159469574 Intergenic 5b 3597 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs212388 chr6 159490436 Intergenic 4 ASSOCIATION 21298027 Crohn's disease and Celiac disease 9.69897000434 TAGAP - FNDC1 ASSOCIATION 21102463 Crohn's disease 10.6989700043 TAGAP - FNDC1 FUNCTIONAL_SNP rs629326 chr6 159496713 Intergenic 5b 6277 CEU:1.0;1.0, CHB:1.0;0.706, JPT:1.0;0.704, YRI:0.903;0.535 FUNCTIONAL_SNP rs212389 chr6 159489791 Intergenic 6 645 CEU:1.0;0.854, YRI:1.0;0.589 LEAD_SNP rs365302 chr6 159646333 Intron 7 ASSOCIATION 21606135 Coronary heart disease 6.09691001301 FNDC1 FUNCTIONAL_SNP rs509648 chr6 159650978 Coding 5b 4645 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs369160 chr6 159638579 Intron 4 7754 CEU:1.0;1.0, CHB:0.918;0.529 FUNCTIONAL_SNP rs433308 chr6 159619866 Intron 4 26467 CEU:1.0;1.0, CHB:0.918;0.529, JPT:1.0;0.555 FUNCTIONAL_SNP rs433171 chr6 159645378 Intron 5a 955 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs294923 chr6 159620925 Intron 6 25408 CEU:1.0;1.0, CHB:0.911;0.531, JPT:1.0;0.555 FUNCTIONAL_SNP rs294920 chr6 159622802 Intron 6 23531 CEU:1.0;1.0, CHB:0.918;0.529, JPT:1.0;0.555 FUNCTIONAL_SNP rs480052 chr6 159651869 Intron 6 5536 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs294917 chr6 159627077 Intron 7 19256 CEU:1.0;1.0, CHB:0.918;0.529, JPT:1.0;0.555 FUNCTIONAL_SNP rs294918 chr6 159626072 Intron 7 20261 CEU:1.0;1.0, CHB:0.918;0.529, JPT:1.0;0.555 FUNCTIONAL_SNP rs418902 chr6 159648864 Intron 7 2531 CEU:1.0;1.0, CHB:1.0;0.922, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs371023 chr6 159618397 Intron 7 27936 CEU:1.0;1.0, CHB:0.918;0.529, JPT:1.0;0.555 FUNCTIONAL_SNP rs444245 chr6 159642963 Intron 7 3370 CEU:1.0;1.0, CHB:1.0;0.783, JPT:1.0;0.753, YRI:1.0;0.96 FUNCTIONAL_SNP rs2782552 chr6 159643696 Intron 7 2637 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs375150 chr6 159650025 Intron 7 3692 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs411523 chr6 159618790 Intron 7 27543 CEU:1.0;1.0 LEAD_SNP rs4516970 chr6 160137687 Intron 4 ASSOCIATION 19084217 Serum markers of iron status 6.0 SOD2 - WTAP LEAD_SNP rs6917747 chr6 160402705 Intron 4 ASSOCIATION 19010793 Brain lesion load 5.15490195999 IGF2R LEAD_SNP rs651164 chr6 160581374 Intergenic 5a ASSOCIATION 21743057 Prostate cancer 9.69897000434 LOC100289162 ASSOCIATION 19767753 Prostate cancer 8.69897000434 LOC100289162 LEAD_SNP rs2279463 chr6 160668389 Intron 6 ASSOCIATION 20383146 Chronic kidney disease 11.2218487496 SLC22A2 FUNCTIONAL_SNP rs3798156 chr6 160676216 Intron 4 7827 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs3127573 chr6 160681393 Exon,non-coding 7 ASSOCIATION 20383145 Serum creatinine 9.15490195999 SLC22A2 FUNCTIONAL_SNP rs3127572 chr6 160682218 Intron 2b 825 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs3119309 chr6 160685072 Intron 5a 3679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3120140 chr6 160738831 Intergenic 6 57438 CEU:1.0;0.824, JPT:1.0;0.658 FUNCTIONAL_SNP rs3127586 chr6 160704912 Intergenic 6 23519 CEU:1.0;0.8, CHB:0.719;0.517, JPT:1.0;0.823 FUNCTIONAL_SNP rs7756836 chr6 160689257 Intron 6 7864 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs3119310 chr6 160692375 Intron 6 10982 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs3119311 chr6 160693107 Intron 6 11714 CEU:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs12209517 chr6 160756736 Intergenic 7 75343 CEU:1.0;1.0 FUNCTIONAL_SNP rs7757336 chr6 160689558 Intron 7 8165 CEU:1.0;0.801, JPT:1.0;0.846 FUNCTIONAL_SNP rs3127578 chr6 160698155 Intron 7 16762 CEU:1.0;1.0, CHB:0.861;0.742, JPT:1.0;1.0 FUNCTIONAL_SNP rs3125056 chr6 160735281 Intergenic 7 53888 CEU:1.0;0.89 LEAD_SNP rs402219 chr6 160789296 Intron 4 ASSOCIATION 21493818 Monocyte early outgrowth colony forming units 6.22184874962 SLC22A3 FUNCTIONAL_SNP rs394352 chr6 160808395 Intron 2b 19099 CEU:1.0;0.956, CHB:1.0;0.908, JPT:1.0;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs420038 chr6 160808148 Intron 4 18852 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs316244 chr6 160796565 Intron 4 7269 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs394487 chr6 160778639 Intron 5b 10657 CEU:0.908;0.825, CHB:0.924;0.514, JPT:0.941;0.725 FUNCTIONAL_SNP rs1018234 chr6 160796058 Intron 5b 6762 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.906 FUNCTIONAL_SNP rs9457935 chr6 160966409 Intron 6 177113 CEU:1.0;0.828 FUNCTIONAL_SNP rs443043 chr6 160789541 Intron 6 245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs446926 chr6 160813756 Intron 6 24460 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.906 FUNCTIONAL_SNP rs394468 chr6 160780912 Intron 6 8384 CEU:0.908;0.825, CHB:0.924;0.514, JPT:0.941;0.725 FUNCTIONAL_SNP rs4709441 chr6 160936231 Intergenic 7 146935 CEU:1.0;0.82 FUNCTIONAL_SNP rs2136675 chr6 160896431 Intron 7 107135 CEU:1.0;0.82, YRI:0.853;0.564 FUNCTIONAL_SNP rs440962 chr6 160811154 Intron 7 21858 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs7453836 chr6 160942891 Intergenic 7 153595 CEU:1.0;0.823 FUNCTIONAL_SNP rs9365168 chr6 160940120 Intergenic 7 150824 CEU:1.0;0.828 FUNCTIONAL_SNP rs1567438 chr6 160879631 Intergenic 7 90335 CEU:1.0;0.952 FUNCTIONAL_SNP rs377551 chr6 160781733 Intron 7 7563 CEU:0.907;0.823, CHB:0.924;0.514, JPT:0.939;0.718 FUNCTIONAL_SNP rs1567442 chr6 160857315 Intron 7 68019 CEU:1.0;0.911 FUNCTIONAL_SNP rs2504937 chr6 160823726 Intron 7 34430 CEU:1.0;1.0, CHB:0.885;0.62, JPT:0.948;0.856 FUNCTIONAL_SNP rs1510225 chr6 160818263 Intron 7 28967 CEU:1.0;1.0, CHB:1.0;0.905, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs1510229 chr6 160805669 Intron 7 16373 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs2174914 chr6 160863108 Intron 7 73812 CEU:1.0;0.955, YRI:0.931;0.719 FUNCTIONAL_SNP rs2661834 chr6 160850911 Intron 7 61615 CEU:1.0;0.954 FUNCTIONAL_SNP rs2457550 chr6 160895129 Intron 7 105833 CEU:1.0;0.846, YRI:0.922;0.612 FUNCTIONAL_SNP rs2457569 chr6 160904256 Intron 7 114960 CEU:1.0;0.828, YRI:0.793;0.522 FUNCTIONAL_SNP rs2457575 chr6 160868327 Intron 7 79031 CEU:1.0;0.955, YRI:0.927;0.665 FUNCTIONAL_SNP rs2457576 chr6 160865619 Intron 7 76323 CEU:1.0;0.955 FUNCTIONAL_SNP rs2063345 chr6 160860154 Intron 7 70858 CEU:1.0;0.955, YRI:0.931;0.719 LEAD_SNP rs9364554 chr6 160833664 Intron 4 ASSOCIATION 18264097 Prostate cancer 9.22184874962 SLC22A3 FUNCTIONAL_SNP rs12194182 chr6 160834515 Intron 7 851 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1112444 chr6 160835192 Intron 7 1528 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7758229 chr6 160840252 Intron 7 ASSOCIATION 21242260 Colorectal cancer 8.09691001301 SLC22A3 FUNCTIONAL_SNP rs3123636 chr6 160842537 Intron 7 2285 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10455782 chr6 160839350 Intron 7 902 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.917;0.841, YRI:1.0;1.0 LEAD_SNP rs6919346 chr6 160960359 Intron 7 ASSOCIATION 19124843 Plasma Lp (a) levels 10.3979400087 LPA LEAD_SNP rs3798220 chr6 160961137 Coding 6 ASSOCIATION 21378990 Coronary heart disease 10.5228787453 LPA LEAD_SNP rs7770628 chr6 161018174 Intron 7 ASSOCIATION 18464913 Protein quantitative trait loci 9.39794000867 LPA LEAD_SNP rs992037 chr6 162001436 Intron 6 ASSOCIATION 19043545 Serum metabolites 7.0 PARK2 LEAD_SNP rs3016539 chr6 162236075 Intron 7 ASSOCIATION 20686608 Pancreatic cancer 5.15490195999 PARK2 LEAD_SNP rs10945919 chr6 164186677 Intergenic 7 ASSOCIATION 18615156 Response to TNF antagonist treatment 6.52287874528 QKI - C6orf118 LEAD_SNP rs4709845 chr6 164900598 Intergenic 7 ASSOCIATION 20516156 Major depressive disorder 5.04575749056 QKI - C6orf118 FUNCTIONAL_SNP rs10945982 chr6 164783713 Intergenic 5b 116885 CEU:0.927;0.802, CHB:0.881;0.698, JPT:1.0;0.95 FUNCTIONAL_SNP rs9459108 chr6 164884849 Intergenic 6 15749 CEU:1.0;0.938, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs1496117 chr6 164871044 Intergenic 6 29554 CEU:1.0;0.938, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs9459099 chr6 164864108 Intergenic 7 36490 CEU:1.0;0.938, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs10945992 chr6 164886743 Intergenic 7 13855 CEU:1.0;0.877, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.951 LEAD_SNP rs7762160 chr6 166015431 Intron 7 ASSOCIATION 20585324 Conduct disorder (symptom count) 6.0 PDE10A LEAD_SNP rs6915183 chr6 166706169 Intergenic 7 ASSOCIATION 20834067 Longevity 6.0 GNG5P1 - PRR18 FUNCTIONAL_SNP rs6934656 chr6 166706121 Intergenic 7 48 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 LEAD_SNP rs2236313 chr6 167360389 Intron 6 ASSOCIATION 20526339 Vitiligo 16.0 RNASET2 LEAD_SNP rs2301436 chr6 167437988 Intron 7 ASSOCIATION 20570966 Crohn's disease 7.22184874962 FGFR1OP ASSOCIATION 18587394 Crohn's disease 12.0 FGFR1OP FUNCTIONAL_SNP rs10484531 chr6 167454434 Exon,non-coding 7 16446 CEU:1.0;0.853, CHB:0.921;0.571, JPT:1.0;0.673 FUNCTIONAL_SNP rs9459849 chr6 167444160 Intron 3a 6172 CEU:1.0;0.853, CHB:1.0;0.635, JPT:1.0;0.673 FUNCTIONAL_SNP rs6456151 chr6 167471851 Intergenic 3a 33863 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13195812 chr6 167443902 Intron 4 5914 CEU:1.0;0.853, CHB:1.0;0.635, JPT:1.0;0.673, YRI:1.0;0.956 FUNCTIONAL_SNP rs9457252 chr6 167433925 Intron 4 4063 CEU:1.0;0.853, CHB:1.0;0.635, JPT:1.0;0.673 FUNCTIONAL_SNP rs6904946 chr6 167433948 Intron 4 4040 CEU:1.0;0.853, CHB:1.0;0.635, JPT:1.0;0.673, YRI:1.0;0.656 FUNCTIONAL_SNP rs10946208 chr6 167459596 Intergenic 4 21608 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs6456150 chr6 167468922 Intergenic 5a 30934 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12203510 chr6 167473006 Intergenic 5a 35018 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1358883 chr6 167467433 Intergenic 5b 29445 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9457261 chr6 167467679 Intergenic 5b 29691 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2237276 chr6 167442115 Intron 5b 4127 CEU:0.957;0.814, CHB:1.0;0.635, JPT:1.0;0.673, YRI:1.0;0.956 FUNCTIONAL_SNP rs2237277 chr6 167442107 Intron 5b 4119 CEU:1.0;1.0, CHB:1.0;0.73, JPT:1.0;0.746, YRI:1.0;1.0 FUNCTIONAL_SNP rs12213683 chr6 167460718 Intergenic 5b 22730 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1060404 chr6 167429467 Intron 6 8521 CEU:1.0;0.842, CHB:1.0;0.635, JPT:0.842;0.52 FUNCTIONAL_SNP rs2285148 chr6 167490999 Intergenic 6 53011 CEU:1.0;0.82, CHB:1.0;0.643, JPT:1.0;0.58 FUNCTIONAL_SNP rs9457249 chr6 167426438 Intron 6 11550 CEU:1.0;0.959, CHB:1.0;0.657, JPT:1.0;0.827, YRI:1.0;0.564 FUNCTIONAL_SNP rs9457251 chr6 167426707 Intron 6 11281 CEU:1.0;0.853, CHB:1.0;0.635, JPT:1.0;0.673, YRI:1.0;0.575 FUNCTIONAL_SNP rs9457256 chr6 167436461 Intron 6 1527 CEU:1.0;0.853, CHB:1.0;0.635, JPT:1.0;0.673 FUNCTIONAL_SNP rs9459835 chr6 167417551 Intron 6 20437 CEU:1.0;1.0, CHB:1.0;0.674, JPT:1.0;0.608, YRI:1.0;0.609 FUNCTIONAL_SNP rs9295385 chr6 167448181 Intron 6 10193 CEU:1.0;0.851, CHB:1.0;0.635, JPT:1.0;0.673, YRI:1.0;0.956 FUNCTIONAL_SNP rs7749278 chr6 167435325 Intron 6 2663 CEU:1.0;1.0, CHB:1.0;0.674, JPT:1.0;0.608, YRI:1.0;1.0 FUNCTIONAL_SNP rs1894603 chr6 167434686 Intron 6 3302 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12529876 chr6 167461501 Intergenic 6 23513 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2237274 chr6 167442995 Intron 6 5007 CEU:1.0;0.902, CHB:1.0;0.739, JPT:1.0;0.834, YRI:0.951;0.903 FUNCTIONAL_SNP rs720325 chr6 167467349 Intergenic 6 29361 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.873 FUNCTIONAL_SNP rs6900701 chr6 167434112 Intron 6 3876 CEU:1.0;0.853, CHB:1.0;0.635, JPT:1.0;0.673, YRI:1.0;0.955 FUNCTIONAL_SNP rs9295384 chr6 167448113 Intron 7 10125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9457257 chr6 167440736 Intron 7 2748 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9459838 chr6 167426599 Intron 7 11389 CEU:1.0;0.853, CHB:1.0;0.635, JPT:1.0;0.673 FUNCTIONAL_SNP rs9459846 chr6 167441023 Intron 7 3035 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9459862 chr6 167487011 Intergenic 7 49023 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10946204 chr6 167451129 Intron 7 13141 CEU:1.0;0.853, CHB:1.0;0.635, JPT:1.0;0.673 FUNCTIONAL_SNP rs10946205 chr6 167451311 Intron 7 13323 CEU:1.0;1.0, CHB:1.0;0.674, JPT:1.0;0.626, YRI:1.0;1.0 FUNCTIONAL_SNP rs12525345 chr6 167478875 Intergenic 7 40887 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2001114 chr6 167486578 Intergenic 7 48590 CEU:1.0;0.846, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4710176 chr6 167491639 Intergenic 7 53651 CEU:1.0;0.817, CHB:1.0;0.643, JPT:1.0;0.58 FUNCTIONAL_SNP rs6923582 chr6 167437162 Intron 7 826 CEU:1.0;0.853, CHB:1.0;0.635, JPT:1.0;0.673, YRI:1.0;0.956 FUNCTIONAL_SNP rs2237273 chr6 167443017 Intron 7 5029 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2282860 chr6 167440244 Intron 7 2256 CEU:1.0;1.0, CHB:1.0;0.674, JPT:1.0;0.608, YRI:1.0;1.0 FUNCTIONAL_SNP rs2282861 chr6 167440128 Intron 7 2140 CEU:1.0;1.0, CHB:1.0;0.674, JPT:1.0;0.608, YRI:1.0;1.0 FUNCTIONAL_SNP rs2181058 chr6 167465330 Intergenic 7 27342 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6936261 chr6 167469676 Intergenic 7 31688 CEU:1.0;0.853, CHB:1.0;0.674, JPT:1.0;0.608, YRI:1.0;1.0 FUNCTIONAL_SNP rs12526548 chr6 167431147 Intron 7 6841 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.849, YRI:1.0;0.955 LEAD_SNP rs3093024 chr6 167532793 Intron 6 ASSOCIATION 20453841 Rheumatoid arthritis 18.096910013 CCR6 FUNCTIONAL_SNP rs1571878 chr6 167540842 Intron 5a 8049 CEU:1.0;1.0, CHB:1.0;0.906, JPT:1.0;0.862, YRI:1.0;1.0 FUNCTIONAL_SNP rs10946216 chr6 167538897 Intron 7 6104 CEU:1.0;0.96, CHB:1.0;0.906, JPT:1.0;0.862, YRI:1.0;0.917 LEAD_SNP rs3093023 chr6 167534290 Intron 5b ASSOCIATION 20453842 Rheumatoid arthritis 10.6989700043 CCR6 FUNCTIONAL_SNP rs1571878 chr6 167540842 Intron 5a 6552 CEU:0.959;0.919, CHB:1.0;0.905, JPT:1.0;0.855 FUNCTIONAL_SNP rs3093025 chr6 167532731 Intron 5b 1559 CEU:0.953;0.831, CHB:1.0;0.771, JPT:1.0;0.836 FUNCTIONAL_SNP rs968334 chr6 167526096 Intron 5b 8194 CEU:0.958;0.881, CHB:0.944;0.845, JPT:0.944;0.89 FUNCTIONAL_SNP rs6907666 chr6 167523395 Intergenic 5b 10895 CEU:0.958;0.88, JPT:1.0;0.771 FUNCTIONAL_SNP rs3093024 chr6 167532793 Intron 6 1497 CEU:0.959;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10946216 chr6 167538897 Intron 7 4607 CEU:0.958;0.88, CHB:1.0;0.905, JPT:1.0;0.855 LEAD_SNP rs13208776 chr6 168941624 Intron 2b ASSOCIATION 19890347 Vitiligo 7.04575749056 SMOC2 LEAD_SNP rs3734905 chr6 169958982 Intron 7 ASSOCIATION 20041166 HIV-1 control 5.69897000434 WDR27 FUNCTIONAL_SNP rs16888119 chr6 169937237 Intron 5a 21745 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs16888175 chr6 169977419 Intron 5b 18437 CEU:1.0;1.0, CHB:1.0;0.694, JPT:1.0;0.781 FUNCTIONAL_SNP rs12111411 chr6 170026411 Intron 5b 67429 CEU:1.0;1.0, CHB:1.0;0.694, JPT:1.0;0.829 FUNCTIONAL_SNP rs1033458 chr6 169994794 Intron 6 35812 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.935 FUNCTIONAL_SNP rs12526225 chr6 169861325 Intron 7 97657 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;0.804 FUNCTIONAL_SNP rs12525256 chr6 169963753 Intron 7 4771 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2075978 chr6 169812588 Intergenic 7 146394 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.753 FUNCTIONAL_SNP rs4716364 chr6 169949322 Intron 7 9660 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10256972 chr7 1039003 Intron 5b ASSOCIATION 20834067 Longevity 6.0 C7orf50 FUNCTIONAL_SNP rs1007766 chr7 1034903 Intergenic 5b 4100 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6952808 chr7 1886535 Exon,non-coding 5b ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.69897000434 MAD1L1 FUNCTIONAL_SNP rs6954673 chr7 1886937 Coding 5b 402 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6957894 chr7 1887362 Coding 5b 827 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10233560 chr7 1885415 Exon,non-coding 5b 1120 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.809 FUNCTIONAL_SNP rs4719318 chr7 1887930 Exon,non-coding 5b 1395 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.92 FUNCTIONAL_SNP rs6977733 chr7 1886725 Exon,non-coding 5b 190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10260585 chr7 1889521 Exon,non-coding 5b 2986 CEU:1.0;0.957, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs4236271 chr7 1881369 Exon,non-coding 5b 5166 CEU:1.0;0.803, CHB:1.0;0.95, JPT:1.0;0.939, YRI:1.0;1.0 FUNCTIONAL_SNP rs2280550 chr7 1976556 Intron 2a 90021 CEU:0.954;0.87, CHB:0.948;0.817, JPT:1.0;0.663 FUNCTIONAL_SNP rs4610628 chr7 1903100 Intron 2b 16565 CEU:1.0;1.0, CHB:0.953;0.908, JPT:1.0;0.898 FUNCTIONAL_SNP rs2280548 chr7 1976667 Intron 3a 90132 CEU:1.0;0.95, CHB:0.944;0.803, JPT:1.0;0.686 FUNCTIONAL_SNP rs12540579 chr7 1882227 Intron 4 4308 CEU:1.0;0.873, CHB:1.0;0.86, JPT:0.93;0.763 FUNCTIONAL_SNP rs6978048 chr7 1886872 Intron 5b 337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12699404 chr7 1894022 Intron 5b 7487 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs6954521 chr7 1886865 Intron 5b 330 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4721135 chr7 1912222 Intron 5b 25687 CEU:0.953;0.831, CHB:0.949;0.821, JPT:1.0;0.853 FUNCTIONAL_SNP rs4721121 chr7 1892565 Intron 5b 6030 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:0.954;0.77 FUNCTIONAL_SNP rs7799782 chr7 1868039 Intron 5b 18496 CEU:1.0;0.915, CHB:0.947;0.815, JPT:1.0;0.749, YRI:0.727;0.528 FUNCTIONAL_SNP rs4721134 chr7 1912057 Intron 5b 25522 CEU:0.955;0.836, CHB:0.951;0.863, JPT:0.943;0.842 FUNCTIONAL_SNP rs4721217 chr7 1973579 Intron 5b 87044 CEU:0.949;0.857 FUNCTIONAL_SNP rs7799807 chr7 1868092 Intron 5b 18443 CEU:1.0;0.918, CHB:0.949;0.82, JPT:1.0;0.749, YRI:0.866;0.662 FUNCTIONAL_SNP rs4721090 chr7 1873084 Intron 6 13451 CEU:1.0;0.958, CHB:0.953;0.908, JPT:1.0;0.946, YRI:1.0;0.76 LEAD_SNP rs4721135 chr7 1912222 Intron 5b ASSOCIATION 20834067 Longevity 6.0 MAD1L1 LEAD_SNP rs1107592 chr7 2041432 Intron 5b ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.69897000434 MAD1L1 FUNCTIONAL_SNP rs2280548 chr7 1976667 Intron 3a 64765 CEU:0.945;0.806, CHB:0.939;0.718 FUNCTIONAL_SNP rs3778969 chr7 2139990 Intron 4 98558 CEU:0.952;0.827, CHB:0.793;0.6 FUNCTIONAL_SNP rs3778978 chr7 2159817 Intron 4 118385 CEU:1.0;0.868, CHB:0.777;0.574 FUNCTIONAL_SNP rs10239050 chr7 2158390 Intron 5b 116958 CEU:1.0;0.871, CHB:0.941;0.697, JPT:0.861;0.503 FUNCTIONAL_SNP rs4721295 chr7 2036669 Intron 5b 4763 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs12666575 chr7 2004421 Intron 5b 37011 CEU:1.0;0.956, CHB:0.943;0.704 FUNCTIONAL_SNP rs1860832 chr7 2161849 Intron 5b 120417 CEU:1.0;0.871, CHB:0.786;0.563 FUNCTIONAL_SNP rs6950627 chr7 2086672 Intron 5b 45240 CEU:1.0;1.0, CHB:0.879;0.661 FUNCTIONAL_SNP rs3800882 chr7 2120758 Intron 5b 79326 CEU:0.952;0.827, CHB:0.793;0.6 FUNCTIONAL_SNP rs4719443 chr7 2161099 Intron 5b 119667 CEU:1.0;0.871, CHB:0.944;0.736 FUNCTIONAL_SNP rs3800917 chr7 2167939 Intron 5b 126507 CEU:1.0;0.913 FUNCTIONAL_SNP rs2895202 chr7 2131829 Intron 5b 90397 CEU:0.95;0.821, CHB:0.793;0.6 FUNCTIONAL_SNP rs3778983 chr7 2166319 Intron 5b 124887 CEU:1.0;0.913, CHB:0.944;0.736, JPT:0.868;0.538 FUNCTIONAL_SNP rs4721135 chr7 1912222 Intron 5b 129210 CEU:1.0;0.874, CHB:0.881;0.586 FUNCTIONAL_SNP rs2398705 chr7 2164995 Intron 5b 123563 CEU:1.0;0.943, CHB:0.852;0.573 LEAD_SNP rs798544 chr7 2763102 Intron 5b ASSOCIATION 18391951 Height 14.15490196 AMZ1 - GNA12 FUNCTIONAL_SNP rs798554 chr7 2759795 Exon,non-coding 2b 3307 CEU:1.0;1.0, CHB:0.944;0.892, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs798556 chr7 2759002 Exon,non-coding 5b 4100 CEU:1.0;1.0, CHB:0.942;0.888, JPT:1.0;1.0, YRI:1.0;0.906 LEAD_SNP rs798502 chr7 2789880 Intron 2b ASSOCIATION 21297633 Ulcerative colitis 14.5228787453 GNA12 FUNCTIONAL_SNP rs798488 chr7 2802522 Coding 5b 12642 CEU:1.0;0.952, CHB:0.936;0.674, JPT:1.0;0.706 FUNCTIONAL_SNP rs798554 chr7 2759795 Exon,non-coding 2b 30085 CEU:0.952;0.864, CHB:1.0;0.769, JPT:0.901;0.53 FUNCTIONAL_SNP rs798556 chr7 2759002 Exon,non-coding 5b 30878 CEU:0.952;0.864, CHB:1.0;0.763, JPT:0.901;0.53 FUNCTIONAL_SNP rs2644312 chr7 2841164 Intron 2b 51284 CEU:0.953;0.907, CHB:1.0;0.648, JPT:1.0;0.652, YRI:1.0;0.701 FUNCTIONAL_SNP rs1182183 chr7 2873136 Intron 2b 83256 CEU:0.951;0.862 FUNCTIONAL_SNP rs1713919 chr7 2864706 Intron 4 74826 CEU:0.953;0.908, CHB:1.0;0.648, JPT:1.0;0.6 FUNCTIONAL_SNP rs798491 chr7 2800521 Intron 4 10641 CEU:1.0;0.954, CHB:0.942;0.76, JPT:1.0;0.706, YRI:1.0;0.701 FUNCTIONAL_SNP rs798494 chr7 2798294 Intron 4 8414 CEU:1.0;0.954, CHB:0.942;0.76, JPT:1.0;0.706, YRI:1.0;0.701 FUNCTIONAL_SNP rs798495 chr7 2797267 Intron 4 7387 CEU:1.0;0.954, CHB:0.942;0.76, JPT:1.0;0.706, YRI:0.788;0.513 FUNCTIONAL_SNP rs798518 chr7 2777825 Intron 4 12055 CEU:1.0;0.911, CHB:1.0;0.812, JPT:0.911;0.624 FUNCTIONAL_SNP rs1636264 chr7 2864586 Intron 4 74706 CEU:0.952;0.865, CHB:1.0;0.648, JPT:1.0;0.652 FUNCTIONAL_SNP rs1182177 chr7 2874540 Intron 4 84660 CEU:0.951;0.905, CHB:1.0;0.573, JPT:1.0;0.6 FUNCTIONAL_SNP rs2533878 chr7 2878707 Intron 4 88827 CEU:0.953;0.908, CHB:1.0;0.538, JPT:1.0;0.6, YRI:1.0;0.792 FUNCTIONAL_SNP rs960273 chr7 2857876 Intron 5b 67996 CEU:0.951;0.905, CHB:1.0;0.687, JPT:1.0;0.748, YRI:1.0;0.792 FUNCTIONAL_SNP rs798486 chr7 2803037 Intron 5b 13157 CEU:0.953;0.907, CHB:1.0;0.727, JPT:1.0;0.706 FUNCTIONAL_SNP rs798489 chr7 2801803 Intron 5b 11923 CEU:0.953;0.907 FUNCTIONAL_SNP rs798490 chr7 2801542 Intron 5b 11662 CEU:0.953;0.907, CHB:0.936;0.674, JPT:1.0;0.706, YRI:1.0;0.701 FUNCTIONAL_SNP rs798497 chr7 2795957 Intron 5b 6077 CEU:1.0;0.954, CHB:0.942;0.76, JPT:1.0;0.706, YRI:1.0;0.534 FUNCTIONAL_SNP rs798528 chr7 2772431 Intron 5b 17449 CEU:1.0;0.871, CHB:1.0;0.812, JPT:0.915;0.637, YRI:1.0;0.825 FUNCTIONAL_SNP rs798544 chr7 2763102 Intron 5b 26778 CEU:0.952;0.864, CHB:0.936;0.673, JPT:0.901;0.53 FUNCTIONAL_SNP rs798548 chr7 2760935 Intron 5b 28945 CEU:0.951;0.824, CHB:1.0;0.769, JPT:0.901;0.53 FUNCTIONAL_SNP rs798536 chr7 2766383 Intron 5b 23497 CEU:0.952;0.864, CHB:1.0;0.727, JPT:1.0;0.6, YRI:1.0;0.792 FUNCTIONAL_SNP rs1182198 chr7 2862906 Intron 5b 73026 CEU:0.951;0.862, CHB:1.0;0.639, JPT:1.0;0.703, YRI:1.0;0.589 FUNCTIONAL_SNP rs1182181 chr7 2873247 Intron 5b 83367 CEU:0.953;0.908, CHB:1.0;0.573, JPT:1.0;0.6 FUNCTIONAL_SNP rs1182208 chr7 2808732 Intron 6 18852 CEU:1.0;0.943, CHB:1.0;0.594, JPT:1.0;0.706, YRI:1.0;0.792 FUNCTIONAL_SNP rs2107964 chr7 2863574 Intron 6 73694 CEU:0.949;0.818, CHB:1.0;0.648, JPT:0.916;0.638, YRI:1.0;0.589 FUNCTIONAL_SNP rs2158694 chr7 2863443 Intron 6 73563 CEU:0.952;0.865, CHB:1.0;0.687, JPT:0.916;0.638 FUNCTIONAL_SNP rs2260230 chr7 2822986 Intron 6 33106 CEU:0.953;0.907, CHB:1.0;0.687, JPT:0.913;0.67, YRI:1.0;1.0 FUNCTIONAL_SNP rs798485 chr7 2803510 Intron 6 13630 CEU:0.953;0.907, CHB:1.0;0.724, JPT:1.0;0.706, YRI:0.788;0.513 FUNCTIONAL_SNP rs798498 chr7 2795882 Intron 6 6002 CEU:1.0;0.911, CHB:1.0;0.812, JPT:0.916;0.638 FUNCTIONAL_SNP rs798500 chr7 2790685 Intron 6 805 CEU:1.0;0.954, CHB:1.0;0.812, JPT:1.0;0.706, YRI:1.0;0.792 FUNCTIONAL_SNP rs1182171 chr7 2878510 Intron 6 88630 CEU:0.953;0.908, CHB:1.0;0.538, JPT:1.0;0.6 FUNCTIONAL_SNP rs1182174 chr7 2875420 Intron 6 85540 CEU:0.947;0.896, CHB:1.0;0.538, JPT:0.894;0.509 FUNCTIONAL_SNP rs1182179 chr7 2873648 Intron 6 83768 CEU:0.953;0.908, CHB:1.0;0.573, JPT:0.901;0.53 FUNCTIONAL_SNP rs1182185 chr7 2872233 Intron 6 82353 CEU:0.948;0.899, CHB:1.0;0.573, JPT:0.901;0.53 FUNCTIONAL_SNP rs1182188 chr7 2869985 Intron 6 80105 CEU:0.953;0.908, CHB:1.0;0.573, JPT:1.0;0.6 FUNCTIONAL_SNP rs1182189 chr7 2869522 Intron 6 79642 CEU:0.949;0.818, CHB:1.0;0.573, JPT:1.0;0.6 LEAD_SNP rs798497 chr7 2795957 Intron 5b ASSOCIATION 20189936 Height 6.15490195999 GNA12 FUNCTIONAL_SNP rs798486 chr7 2803037 Intron 5b 7080 CEU:1.0;0.954, CHB:1.0;0.849, JPT:1.0;1.0, YRI:1.0;0.891 LEAD_SNP rs1182188 chr7 2869985 Intron 6 ASSOCIATION 19343178 Height 8.52287874528 GNA12 FUNCTIONAL_SNP rs1182181 chr7 2873247 Intron 5b 3262 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs1182171 chr7 2878510 Intron 6 8525 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs1182179 chr7 2873648 Intron 6 3663 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;0.802 FUNCTIONAL_SNP rs1182189 chr7 2869522 Intron 6 463 CEU:1.0;0.908, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 LEAD_SNP rs6462411 chr7 3915564 Intron 6 ASSOCIATION 19197348 Quantitative traits 6.0 SDK1 FUNCTIONAL_SNP rs6956479 chr7 3915077 Intron 5b 487 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs10254099 chr7 3915872 Intron 7 308 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.847 LEAD_SNP rs10488360 chr7 4411209 Intergenic 7 ASSOCIATION 17903294 Factor VII 5.15490195999 RPL21P72 - FOXK1 FUNCTIONAL_SNP rs10261602 chr7 4414227 Intergenic 6 3018 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs4723705 chr7 4412593 Intergenic 6 1384 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10242817 chr7 4414460 Intergenic 7 3251 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11763858 chr7 4411996 Intergenic 7 787 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs6970156 chr7 4413680 Intergenic 7 2471 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.893, YRI:1.0;1.0 FUNCTIONAL_SNP rs2107841 chr7 4413163 Intergenic 7 1954 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10259085 chr7 7268431 Intron 5b ASSOCIATION 19010793 Multiple sclerosis (severity) 5.39794000867 C1GALT1 FUNCTIONAL_SNP rs2108783 chr7 7266867 Intron 6 1564 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.927;0.859 FUNCTIONAL_SNP rs6960832 chr7 7267787 Intron 7 644 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7780564 chr7 7883323 Intron 7 ASSOCIATION 21216879 Insulin-like growth factors 6.39794000867 RPL23AP51 - GLCCI1 FUNCTIONAL_SNP rs11982199 chr7 7879433 Intron 5b 3890 CEU:1.0;0.822, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.86 FUNCTIONAL_SNP rs9690421 chr7 7871699 Intron 6 11624 CEU:1.0;0.822 FUNCTIONAL_SNP rs2042545 chr7 7875445 Intron 7 7878 CEU:1.0;0.822, CHB:1.0;0.951, JPT:1.0;0.909 FUNCTIONAL_SNP rs7795698 chr7 7882474 Intron 7 849 CEU:1.0;0.962, YRI:1.0;0.829 LEAD_SNP rs2349775 chr7 8718080 Intron 5b ASSOCIATION 18762592 Neuroticism 5.15490195999 NXPH1 LEAD_SNP rs6463843 chr7 8838717 Intergenic 7 ASSOCIATION 20100581 Brain imaging 0 - FUNCTIONAL_SNP rs886578 chr7 8824847 Intergenic 4 13870 CEU:1.0;0.848, CHB:1.0;0.954, JPT:1.0;0.952, YRI:1.0;0.592 FUNCTIONAL_SNP rs6956807 chr7 8832435 Intergenic 7 6282 CEU:1.0;0.848, CHB:1.0;0.756, JPT:1.0;0.865 FUNCTIONAL_SNP rs10269595 chr7 8847406 Intergenic 7 8689 CEU:1.0;0.886, CHB:1.0;0.756, JPT:1.0;0.862 FUNCTIONAL_SNP rs7791419 chr7 8833563 Intergenic 7 5154 CEU:1.0;0.848, CHB:0.944;0.706, JPT:1.0;0.865 FUNCTIONAL_SNP rs10252645 chr7 8842523 Intergenic 7 3806 CEU:1.0;0.886, CHB:1.0;0.954, JPT:1.0;1.0 LEAD_SNP rs17157663 chr7 8998976 Intergenic 7 ASSOCIATION 19197348 Quantitative traits 5.04575749056 RPL9P19 - GAPDHL13 FUNCTIONAL_SNP rs16874905 chr7 8999081 Intergenic 7 105 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16874906 chr7 8999187 Intergenic 7 211 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7804343 chr7 8998637 Intergenic 7 339 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6968663 chr7 8998231 Intergenic 7 745 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs7804510 chr7 8998803 Intergenic 7 173 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1285407 chr7 9266388 Intergenic 5a ASSOCIATION 18464913 Protein quantitative trait loci 6.0 RPL9P19 - GAPDHL13 FUNCTIONAL_SNP rs1285406 chr7 9266695 Intergenic 7 307 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9918508 chr7 9539279 Intergenic 7 ASSOCIATION 19668339 Hippocampal atrophy 5.09691001301 RPL9P19 - GAPDHL13 LEAD_SNP rs7778619 chr7 10149976 Intergenic 5b ASSOCIATION 17903293 Select biomarker traits 5.52287874528 PER4 - NDUFA4 LEAD_SNP rs732577 chr7 12932049 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 5.39794000867 ARL4A - RPL26P21 FUNCTIONAL_SNP rs10950424 chr7 12927594 Intergenic 7 4455 CEU:1.0;1.0, YRI:1.0;0.516 FUNCTIONAL_SNP rs10447589 chr7 12937133 Intergenic 7 5084 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.938 LEAD_SNP rs6971925 chr7 14445917 Intron 6 ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 5.52287874528 DGKB LEAD_SNP rs10244051 chr7 15063833 Intergenic 7 ASSOCIATION 19060910 Other metabolic traits 7.0 EEF1A1P26 - TMEM195 FUNCTIONAL_SNP rs10258074 chr7 15064216 Intergenic 6 383 CEU:1.0;0.961, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2215383 chr7 15062983 Intergenic 6 850 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2191348 chr7 15064255 Intergenic 6 422 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2191349 chr7 15064309 Intergenic 7 476 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.821 LEAD_SNP rs2191349 chr7 15064309 Intergenic 7 ASSOCIATION 20081858 Fasting glucose-related traits 16.5228787453 EEF1A1P26 - TMEM195 ASSOCIATION 20081858 Fasting glucose-related traits 43.5228787453 EEF1A1P26 - TMEM195 FUNCTIONAL_SNP rs7798124 chr7 15055616 Intergenic 5b 8693 CEU:1.0;0.822, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10258074 chr7 15064216 Intergenic 6 93 CEU:1.0;0.963, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs6960043 chr7 15052860 Intergenic 6 11449 CEU:1.0;0.853 FUNCTIONAL_SNP rs1558317 chr7 15065564 Intergenic 6 1255 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.881;0.72 FUNCTIONAL_SNP rs11514706 chr7 15059272 Intergenic 6 5037 CEU:1.0;0.924 FUNCTIONAL_SNP rs2215383 chr7 15062983 Intergenic 6 1326 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.836 FUNCTIONAL_SNP rs2191348 chr7 15064255 Intergenic 6 54 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs6976381 chr7 15048814 Intergenic 6 15495 CEU:0.96;0.824 FUNCTIONAL_SNP rs10950549 chr7 15057829 Intergenic 7 6480 CEU:1.0;0.828, CHB:1.0;0.947, JPT:1.0;0.889 FUNCTIONAL_SNP rs1558318 chr7 15065612 Intergenic 7 1303 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.878;0.713 FUNCTIONAL_SNP rs10487796 chr7 15063430 Intergenic 7 879 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.528 FUNCTIONAL_SNP rs12113083 chr7 15051943 Intergenic 7 12366 CEU:1.0;0.861 FUNCTIONAL_SNP rs6962498 chr7 15050305 Intergenic 7 14004 CEU:1.0;0.861 FUNCTIONAL_SNP rs4719433 chr7 15065003 Intergenic 7 694 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.872;0.7 FUNCTIONAL_SNP rs10244051 chr7 15063833 Intergenic 7 476 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs1974620 chr7 15065467 Intergenic 7 1158 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.872;0.7 FUNCTIONAL_SNP rs6461153 chr7 15059796 Intergenic 7 4513 CEU:1.0;0.831, CHB:1.0;1.0, JPT:0.883;0.779, YRI:0.81;0.61 FUNCTIONAL_SNP rs6947830 chr7 15064984 Intergenic 7 675 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.872;0.7 FUNCTIONAL_SNP rs4721400 chr7 15059906 Intergenic 7 4403 CEU:1.0;0.822, CHB:1.0;0.945, JPT:1.0;0.937 LEAD_SNP rs10486776 chr7 15742786 Intergenic 6 ASSOCIATION 17434096 Stroke 5.22184874962 RPL36AP26 - ISPD LEAD_SNP rs10270805 chr7 16500142 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 5.04575749056 RPL36AP29 - SOSTDC1 FUNCTIONAL_SNP rs6971172 chr7 16504273 Intron 5b 4131 CEU:1.0;0.848 FUNCTIONAL_SNP rs2528468 chr7 16519510 Intron 5b 19368 CEU:1.0;0.848 FUNCTIONAL_SNP rs1921835 chr7 16484541 Intergenic 6 15601 CEU:1.0;1.0 FUNCTIONAL_SNP rs2528477 chr7 16507247 Intron 6 7105 CEU:1.0;0.848 FUNCTIONAL_SNP rs1921831 chr7 16487259 Intergenic 7 12883 CEU:1.0;1.0 FUNCTIONAL_SNP rs10238442 chr7 16486969 Intergenic 7 13173 CEU:1.0;1.0 FUNCTIONAL_SNP rs9791629 chr7 16500409 Intergenic 7 267 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4721500 chr7 16484903 Intergenic 7 15239 CEU:1.0;1.0 FUNCTIONAL_SNP rs2528478 chr7 16506602 Intron 7 6460 CEU:1.0;0.848 LEAD_SNP rs4410790 chr7 17284577 Intergenic 7 ASSOCIATION 21490707 Caffeine consumption 18.6989700043 RAD17P1 - AHR FUNCTIONAL_SNP rs6968865 chr7 17287269 Intergenic 5b 2692 CEU:1.0;0.836, CHB:1.0;1.0, JPT:1.0;0.792, YRI:0.961;0.89 FUNCTIONAL_SNP rs6968554 chr7 17287106 Intergenic 5b 2529 CEU:1.0;0.888, CHB:1.0;0.953, JPT:1.0;0.792 FUNCTIONAL_SNP rs2106727 chr7 17287998 Intergenic 7 3421 CEU:1.0;0.924, CHB:0.941;0.836, JPT:0.867;0.668 LEAD_SNP rs6968865 chr7 17287269 Intergenic 5b ASSOCIATION 21357676 Coffee consumption 10.6989700043 RAD17P1 - AHR FUNCTIONAL_SNP rs6968554 chr7 17287106 Intergenic 5b 163 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4410790 chr7 17284577 Intergenic 7 2692 CEU:1.0;0.836, CHB:1.0;1.0, JPT:1.0;0.792, YRI:0.961;0.89 FUNCTIONAL_SNP rs2106727 chr7 17287998 Intergenic 7 729 CEU:1.0;0.918, CHB:1.0;0.886, JPT:0.934;0.774 LEAD_SNP rs10499504 chr7 17561583 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.39794000867 AHR - SNX13 FUNCTIONAL_SNP rs1375236 chr7 17563737 Intron 5a 2154 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4463325 chr7 17563591 Intron 5a 2008 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1979095 chr7 17560660 Intron 5b 923 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17706753 chr7 17562922 Intron 5b 1339 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17707061 chr7 17566143 Intron 5b 4560 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1979096 chr7 17560749 Intron 5b 834 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs13230855 chr7 17559436 Intron 6 2147 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs17707175 chr7 17567423 Intron 7 5840 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs6977660 chr7 19805480 Intron 7 ASSOCIATION 17903292 Thyroid stimulating hormone 5.39794000867 TMEM196 FUNCTIONAL_SNP rs6943114 chr7 19818354 Intergenic 6 12874 CEU:1.0;1.0, CHB:0.947;0.897, JPT:0.942;0.841, YRI:0.96;0.885 FUNCTIONAL_SNP rs714239 chr7 19803944 Intron 6 1536 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs13233821 chr7 19813637 Intergenic 7 8157 CEU:1.0;1.0, CHB:0.949;0.901, JPT:0.942;0.841, YRI:0.963;0.926 FUNCTIONAL_SNP rs12531373 chr7 19816825 Intergenic 7 11345 CEU:1.0;1.0, CHB:0.947;0.897, JPT:0.933;0.818, YRI:0.958;0.88 FUNCTIONAL_SNP rs13230910 chr7 19806003 Intron 7 523 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs38152 chr7 20047575 Intergenic 5b ASSOCIATION 20041166 HIV-1 control 7.15490195999 RPL21P75 - MACC1 FUNCTIONAL_SNP rs38158 chr7 20043258 Intergenic 5a 4317 CEU:1.0;1.0, YRI:0.935;0.875 FUNCTIONAL_SNP rs38128 chr7 20073828 Intergenic 5b 26253 CEU:1.0;1.0, YRI:1.0;0.808 FUNCTIONAL_SNP rs38160 chr7 20041408 Intron 6 6167 CEU:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs38144 chr7 20054753 Intergenic 7 7178 CEU:1.0;1.0, YRI:1.0;0.808 FUNCTIONAL_SNP rs38151 chr7 20049015 Intergenic 7 1440 CEU:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs38156 chr7 20044028 Intergenic 7 3547 CEU:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs38143 chr7 20056867 Intergenic 7 9292 CEU:1.0;1.0, YRI:1.0;0.808 LEAD_SNP rs10950821 chr7 20647015 Intergenic 4 ASSOCIATION 20339536 Response to statin therapy 5.15490195999 EEF1A1P27 - ABCB5 FUNCTIONAL_SNP rs2893006 chr7 20687181 Coding 7 40166 CEU:1.0;0.804, YRI:0.902;0.532 FUNCTIONAL_SNP rs17143180 chr7 20646786 Intergenic 5a 229 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7777864 chr7 20663684 Intron 5b 16669 CEU:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs916737 chr7 20689420 Intron 6 42405 CEU:1.0;0.804 FUNCTIONAL_SNP rs7807360 chr7 20698077 Intron 6 51062 CEU:1.0;0.807 FUNCTIONAL_SNP rs7783959 chr7 20682513 Intron 6 35498 CEU:1.0;0.807, YRI:1.0;0.656 FUNCTIONAL_SNP rs2285557 chr7 20692413 Intron 6 45398 CEU:1.0;0.807 FUNCTIONAL_SNP rs4457229 chr7 20652652 Intergenic 7 5637 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs2285559 chr7 20692637 Intron 7 45622 CEU:1.0;0.807 FUNCTIONAL_SNP rs11769236 chr7 20685786 Intron 7 38771 CEU:1.0;0.804, YRI:0.902;0.532 LEAD_SNP rs2709736 chr7 20862302 Intergenic 7 ASSOCIATION 20386566 Bipolar disorder 6.30102999566 SP8 - RPL23P8 FUNCTIONAL_SNP rs2709744 chr7 20858319 Intergenic 6 3983 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.903 FUNCTIONAL_SNP rs2709722 chr7 20867808 Intergenic 7 5506 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.952;0.866 FUNCTIONAL_SNP rs4721954 chr7 20862866 Intergenic 7 564 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.948 FUNCTIONAL_SNP rs2709741 chr7 20872854 Intergenic 7 10552 CEU:0.959;0.919, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.951;0.862 LEAD_SNP rs12155172 chr7 20994491 Intron 5b ASSOCIATION 19767753 Prostate cancer 5.04575749056 RPS26P30 - ASS1P11 LEAD_SNP rs17144465 chr7 21504427 Intron 5b ASSOCIATION 20125088 Major depressive disorder 5.22184874962 SP4 ASSOCIATION 20038947 Major depressive disorder (broad) 6.09691001301 SP4 FUNCTIONAL_SNP rs7795411 chr7 21474580 Intron 7 29847 CEU:1.0;1.0, CHB:0.947;0.853, JPT:1.0;0.9 LEAD_SNP rs12670798 chr7 21607352 Intron 6 ASSOCIATION 19060911 Cholesterol, total 6.04575749056 DNAH11 ASSOCIATION 19060911 LDL cholesterol 8.22184874962 DNAH11 LEAD_SNP rs368331 chr7 21742974 Intron 4 ASSOCIATION 21116278 MRI atrophy measures 5.39794000867 DNAH11 ASSOCIATION 21116278 Total ventricular volume 5.69897000434 DNAH11 FUNCTIONAL_SNP rs17333050 chr7 21738928 Intron 6 4046 CEU:1.0;1.0 FUNCTIONAL_SNP rs413571 chr7 21742801 Intron 7 173 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 LEAD_SNP rs1175000 chr7 22024040 Intergenic 5a ASSOCIATION 20189936 Height 5.30102999566 CDCA7L - RAPGEF5 LEAD_SNP rs10499559 chr7 22109459 Intergenic 7 ASSOCIATION 17903292 Thyroid stimulating hormone 5.09691001301 CDCA7L - RAPGEF5 FUNCTIONAL_SNP rs17146132 chr7 22111374 Intergenic 7 1915 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 LEAD_SNP rs17364464 chr7 22514053 Intron 6 ASSOCIATION 21546767 Dialysis-related mortality 5.39794000867 RAPGEF5 - MGC87042 LEAD_SNP rs2097677 chr7 22732839 Intergenic 7 ASSOCIATION 21196492 C-reactive protein 10.3979400087 EEF1A1P6 - IL6 FUNCTIONAL_SNP rs11763992 chr7 22725522 Intergenic 6 7317 CEU:1.0;0.872, CHB:1.0;0.932, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs6969856 chr7 22722537 Intergenic 7 10302 CEU:1.0;1.0, CHB:1.0;0.932, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs13225099 chr7 22722925 Intergenic 7 9914 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.858 LEAD_SNP rs12534093 chr7 23502974 Intron 6 ASSOCIATION 20881960 Height 13.6989700043 IGF2BP3 FUNCTIONAL_SNP rs12540730 chr7 23483815 Intron 4 19159 CEU:0.941;0.835, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12700441 chr7 23495911 Intron 5b 7063 CEU:1.0;0.891, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11763760 chr7 23480467 Intron 5b 22507 CEU:1.0;0.89, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12533936 chr7 23487252 Intron 6 15722 CEU:1.0;0.944, CHB:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17151904 chr7 25608409 Intergenic 4 ASSOCIATION 20009918 Carotid atherosclerosis in HIV infection 6.0 NPVF - UBA52P1 FUNCTIONAL_SNP rs10499566 chr7 25608438 Intergenic 4 29 CEU:1.0;0.818, YRI:1.0;0.777 FUNCTIONAL_SNP rs11973620 chr7 25608070 Intergenic 5b 339 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11973605 chr7 25607805 Intergenic 6 604 CEU:1.0;0.94, CHB:1.0;0.949, JPT:1.0;1.0, YRI:0.85;0.632 FUNCTIONAL_SNP rs12669889 chr7 25607505 Intergenic 7 904 CEU:1.0;0.94, CHB:1.0;0.949, JPT:1.0;1.0, YRI:0.76;0.577 FUNCTIONAL_SNP rs11973587 chr7 25607939 Intergenic 7 470 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.854;0.64 LEAD_SNP rs1055144 chr7 25871109 Intergenic 5b ASSOCIATION 20935629 Waist-hip ratio 24.0 UBA52P1 - NFE2L3 FUNCTIONAL_SNP rs1451385 chr7 25894721 Intergenic 2a 23612 CEU:1.0;0.832 FUNCTIONAL_SNP rs6958350 chr7 25871933 Intergenic 4 824 CEU:1.0;0.832 FUNCTIONAL_SNP rs9987000 chr7 25883207 Intergenic 4 12098 CEU:1.0;1.0 FUNCTIONAL_SNP rs11770186 chr7 25894232 Intergenic 4 23123 CEU:1.0;1.0, CHB:0.952;0.907, JPT:0.95;0.86, YRI:1.0;1.0 FUNCTIONAL_SNP rs979165 chr7 25886478 Intergenic 4 15369 CEU:1.0;0.832 FUNCTIONAL_SNP rs12666961 chr7 25895685 Intergenic 4 24576 CEU:1.0;1.0, CHB:0.952;0.907, JPT:0.902;0.814, YRI:1.0;0.589 FUNCTIONAL_SNP rs35766302 chr7 25869484 Intergenic 5a 1625 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2893220 chr7 25862733 Intergenic 5a 8376 CEU:1.0;0.832, CHB:1.0;0.91, JPT:1.0;0.953 FUNCTIONAL_SNP rs10225976 chr7 25869693 Intergenic 5a 1416 CEU:1.0;0.832, CHB:1.0;0.954, JPT:1.0;0.909 FUNCTIONAL_SNP rs12535837 chr7 25861138 Intergenic 5b 9971 CEU:1.0;0.832 FUNCTIONAL_SNP rs7793216 chr7 25890060 Intergenic 5b 18951 CEU:1.0;0.826 FUNCTIONAL_SNP rs10260677 chr7 25874991 Intergenic 5b 3882 CEU:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.589 FUNCTIONAL_SNP rs4722530 chr7 25884102 Intergenic 5b 12993 CEU:1.0;1.0 FUNCTIONAL_SNP rs10245353 chr7 25858614 Intergenic 5b 12495 CEU:1.0;1.0, CHB:0.952;0.907, JPT:0.95;0.86, YRI:1.0;1.0 FUNCTIONAL_SNP rs10238703 chr7 25882174 Intergenic 5b 11065 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs10271088 chr7 25865220 Intergenic 6 5889 CEU:1.0;0.865 FUNCTIONAL_SNP rs10232819 chr7 25876612 Intergenic 6 5503 CEU:1.0;0.817 FUNCTIONAL_SNP rs1451382 chr7 25861419 Intergenic 6 9690 CEU:1.0;0.832, CHB:1.0;0.91, JPT:1.0;0.909 FUNCTIONAL_SNP rs2391168 chr7 25862790 Intergenic 7 8319 CEU:1.0;1.0, CHB:1.0;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs1376527 chr7 25876805 Intergenic 7 5696 CEU:1.0;0.832 FUNCTIONAL_SNP rs3902751 chr7 25861639 Intergenic 7 9470 CEU:1.0;0.832 FUNCTIONAL_SNP rs2893221 chr7 25869200 Intergenic 7 1909 CEU:1.0;0.904 FUNCTIONAL_SNP rs4141278 chr7 25857525 Intergenic 7 13584 CEU:1.0;1.0, CHB:0.951;0.905, JPT:0.945;0.808 FUNCTIONAL_SNP rs7798431 chr7 25860812 Intergenic 7 10297 CEU:1.0;0.832, CHB:1.0;0.91, JPT:1.0;0.909 FUNCTIONAL_SNP rs10282436 chr7 25873110 Intergenic 7 2001 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10951112 chr7 25882839 Intergenic 7 11730 CEU:1.0;1.0 FUNCTIONAL_SNP rs41469349 chr7 25870440 Intergenic 7 669 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4722529 chr7 25880011 Intergenic 7 8902 CEU:1.0;0.832 FUNCTIONAL_SNP rs10267498 chr7 25881726 Intergenic 7 10617 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909, YRI:1.0;1.0 FUNCTIONAL_SNP rs7798002 chr7 25860580 Intergenic 7 10529 CEU:1.0;0.939, CHB:1.0;0.954, JPT:1.0;0.953 LEAD_SNP rs12700667 chr7 25901639 Intergenic 4 ASSOCIATION 21151130 Endometriosis 9.0 UBA52P1 - NFE2L3 FUNCTIONAL_SNP rs1451385 chr7 25894721 Intergenic 2a 6918 CEU:1.0;0.847, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6958350 chr7 25871933 Intergenic 4 29706 CEU:1.0;0.847, CHB:1.0;0.924, JPT:1.0;0.924, YRI:0.917;0.75 FUNCTIONAL_SNP rs979165 chr7 25886478 Intergenic 4 15161 CEU:1.0;0.847 FUNCTIONAL_SNP rs2893220 chr7 25862733 Intergenic 5a 38906 CEU:1.0;0.847 FUNCTIONAL_SNP rs10225976 chr7 25869693 Intergenic 5a 31946 CEU:1.0;0.847 FUNCTIONAL_SNP rs12535837 chr7 25861138 Intergenic 5b 40501 CEU:1.0;0.847, CHB:1.0;0.851, JPT:1.0;0.85 FUNCTIONAL_SNP rs7793216 chr7 25890060 Intergenic 5b 11579 CEU:1.0;0.842, CHB:1.0;0.924, JPT:1.0;0.924, YRI:0.882;0.779 FUNCTIONAL_SNP rs10271088 chr7 25865220 Intergenic 6 36419 CEU:1.0;0.822 FUNCTIONAL_SNP rs10232819 chr7 25876612 Intergenic 6 25027 CEU:1.0;0.885, CHB:1.0;0.92, JPT:1.0;0.915 FUNCTIONAL_SNP rs1451382 chr7 25861419 Intergenic 6 40220 CEU:1.0;0.847 FUNCTIONAL_SNP rs1376527 chr7 25876805 Intergenic 7 24834 CEU:1.0;0.847 FUNCTIONAL_SNP rs7798431 chr7 25860812 Intergenic 7 40827 CEU:1.0;0.847 FUNCTIONAL_SNP rs3902751 chr7 25861639 Intergenic 7 40000 CEU:1.0;0.847, CHB:0.918;0.842, JPT:0.92;0.785 FUNCTIONAL_SNP rs4722529 chr7 25880011 Intergenic 7 21628 CEU:1.0;0.846, CHB:1.0;0.924, JPT:1.0;0.842, YRI:0.869;0.724 LEAD_SNP rs886716 chr7 26557618 Intergenic 7 ASSOCIATION 19247474 Smoking behavior 5.09691001301 SNX10 - KIAA0087 FUNCTIONAL_SNP rs4722605 chr7 26555890 Intergenic 6 1728 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs886719 chr7 26558545 Intergenic 7 927 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 LEAD_SNP rs7804356 chr7 26891665 Intron 6 ASSOCIATION 19430480 Type 1 diabetes 8.30102999566 SKAP2 FUNCTIONAL_SNP rs3801828 chr7 26855284 Intron 4 36381 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.925;0.856 FUNCTIONAL_SNP rs3801803 chr7 26901740 Intron 5a 10075 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs10486485 chr7 26900356 Intron 5a 8691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3801805 chr7 26897640 Intron 5b 5975 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3801807 chr7 26897439 Intron 5b 5774 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3823932 chr7 26853980 Intron 5b 37685 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.936 FUNCTIONAL_SNP rs3823933 chr7 26853966 Intron 5b 37699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12537323 chr7 26854388 Intron 5b 37277 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13438513 chr7 26860633 Intron 6 31032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13438514 chr7 26860688 Intron 6 30977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10272190 chr7 26887942 Intron 6 3723 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs2030136 chr7 26891016 Intron 6 649 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7785832 chr7 26852760 Intron 6 38905 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs2031811 chr7 26890672 Intron 6 993 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs10272457 chr7 26888155 Intron 6 3510 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs3801808 chr7 26896555 Intron 6 4890 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs3801810 chr7 26892531 Intron 6 866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10486483 chr7 26892440 Intron 6 775 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3801814 chr7 26881302 Intron 6 10363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs3801843 chr7 26830201 Intron 6 61464 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:1.0;0.821 FUNCTIONAL_SNP rs3801844 chr7 26829759 Intron 6 61906 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs1327988 chr7 26828965 Intron 6 62700 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs17315775 chr7 26860134 Intron 6 31531 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10227673 chr7 26865299 Intron 6 26366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10270187 chr7 26885885 Intron 6 5780 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17315929 chr7 26864173 Intron 7 27492 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10227231 chr7 26888074 Intron 7 3591 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs10256250 chr7 26895080 Intron 7 3415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12534899 chr7 26877189 Intron 7 14476 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10276471 chr7 26837940 Intron 7 53725 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs3801812 chr7 26887615 Intron 7 4050 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs3801813 chr7 26887069 Intron 7 4596 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs3801815 chr7 26881292 Intron 7 10373 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs3801816 chr7 26881177 Intron 7 10488 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs3801820 chr7 26861353 Intron 7 30312 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3801821 chr7 26861206 Intron 7 30459 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3801825 chr7 26856959 Intron 7 34706 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3801830 chr7 26854870 Intron 7 36795 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3801840 chr7 26832986 Intron 7 58679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs3801842 chr7 26830263 Intron 7 61402 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs3801850 chr7 26820577 Intron 7 71088 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs10267950 chr7 26826757 Intron 7 64908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs6948657 chr7 26855943 Intron 7 35722 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1327989 chr7 26833563 Intron 7 58102 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs3823936 chr7 26853830 Intron 7 37835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7791513 chr7 26893357 Intron 7 1692 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12536560 chr7 26822876 Intron 7 68789 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs7805766 chr7 26865610 Intron 7 26055 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10242572 chr7 26895065 Intron 7 3400 CEU:1.0;0.891, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12535784 chr7 26882067 Intron 7 9598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13225783 chr7 27330056 Intergenic 7 ASSOCIATION 20445134 Heart failure 5.15490195999 RPL35P4 - HIBADH FUNCTIONAL_SNP rs17428443 chr7 27334937 Intergenic 7 4881 CEU:1.0;0.824 LEAD_SNP rs10486567 chr7 27976563 Intron 4 ASSOCIATION 18264096 Prostate cancer 5.69897000434 JAZF1 FUNCTIONAL_SNP rs7808935 chr7 27977363 Intron 5b 800 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs864745 chr7 28180556 Intron 7 ASSOCIATION 18372903 Type 2 diabetes 13.3010299957 JAZF1 FUNCTIONAL_SNP rs1635852 chr7 28189411 Intron 2b 8855 CEU:1.0;0.961, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs849133 chr7 28192280 Intron 5b 11724 CEU:1.0;0.881, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs849134 chr7 28196222 Intron 6 15666 CEU:1.0;0.96, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs849141 chr7 28185091 Intron 3a ASSOCIATION 19343178 Height 10.5228787453 JAZF1 LEAD_SNP rs1635852 chr7 28189411 Intron 2b ASSOCIATION 18952825 Height 9.04575749056 JAZF1 FUNCTIONAL_SNP rs849133 chr7 28192280 Intron 5b 2869 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs849134 chr7 28196222 Intron 6 6811 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs864745 chr7 28180556 Intron 7 8855 CEU:1.0;0.961, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.952 LEAD_SNP rs849134 chr7 28196222 Intron 6 ASSOCIATION 20581827 Type 2 diabetes 8.52287874528 JAZF1 FUNCTIONAL_SNP rs1635852 chr7 28189411 Intron 2b 6811 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs849133 chr7 28192280 Intron 5b 3942 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs849135 chr7 28196413 Intron 6 191 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs864745 chr7 28180556 Intron 7 15666 CEU:1.0;0.96, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs849142 chr7 28185891 Intron 7 10331 CEU:1.0;0.962, YRI:1.0;0.626 LEAD_SNP rs11765845 chr7 28391142 Intron 3a ASSOCIATION 21441570 Diabetic retinopathy 5.15490195999 CREB5 FUNCTIONAL_SNP rs10253518 chr7 28400689 Intron 5a 9547 CEU:1.0;0.951 FUNCTIONAL_SNP rs7779602 chr7 28392168 Intron 5b 1026 CEU:1.0;0.951 FUNCTIONAL_SNP rs7796544 chr7 28392183 Intron 5b 1041 CEU:1.0;0.951 FUNCTIONAL_SNP rs714218 chr7 28397908 Intron 5b 6766 CEU:1.0;1.0, JPT:0.941;0.796, YRI:1.0;0.799 FUNCTIONAL_SNP rs10269705 chr7 28389141 Intron 6 2001 CEU:1.0;0.948 FUNCTIONAL_SNP rs721978 chr7 28397822 Intron 6 6680 CEU:1.0;1.0, JPT:0.886;0.745, YRI:1.0;0.799 FUNCTIONAL_SNP rs10269463 chr7 28388964 Intron 7 2178 CEU:1.0;0.875 FUNCTIONAL_SNP rs10242868 chr7 28393119 Intron 7 1977 CEU:0.95;0.86 LEAD_SNP rs2237349 chr7 28762963 Intron 7 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.30102999566 CREB5 LEAD_SNP rs2252521 chr7 29041190 Intron 6 ASSOCIATION 19734545 Cognitive performance 5.30102999566 CPVL LEAD_SNP rs10486607 chr7 29184489 Intron 6 ASSOCIATION 17903298 Diabetes related insulin traits 5.09691001301 CPVL FUNCTIONAL_SNP rs13238274 chr7 29180335 Intron 5a 4154 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs17677510 chr7 29182574 Intron 5b 1915 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 LEAD_SNP rs1558477 chr7 31155347 Intergenic 6 ASSOCIATION 21621269 Major depressive disorder 6.52287874528 ADCYAP1R1 - NEUROD6 LEAD_SNP rs215614 chr7 32347335 Intergenic 6 ASSOCIATION 20418888 Smoking behavior 6.69897000434 PDE1C - SLC25A5P5 FUNCTIONAL_SNP rs1668389 chr7 32386915 Intergenic 2b 39580 CEU:1.0;0.953, CHB:0.884;0.741, JPT:0.935;0.822 FUNCTIONAL_SNP rs10226228 chr7 32315613 Intron 5a 31722 CEU:0.914;0.836 FUNCTIONAL_SNP rs215692 chr7 32394858 Intergenic 5b 47523 CEU:1.0;0.958 FUNCTIONAL_SNP rs215600 chr7 32333642 Intron 5b 13693 CEU:0.955;0.874, CHB:1.0;0.703 FUNCTIONAL_SNP rs215601 chr7 32333921 Intron 5b 13414 CEU:0.915;0.838, CHB:0.818;0.572 FUNCTIONAL_SNP rs215605 chr7 32336965 Intron 5b 10370 CEU:1.0;1.0, CHB:1.0;0.898, JPT:1.0;0.847 FUNCTIONAL_SNP rs12540232 chr7 32322961 Intron 5b 24374 CEU:0.915;0.838, CHB:1.0;0.506 FUNCTIONAL_SNP rs215625 chr7 32358313 Intergenic 5b 10978 CEU:1.0;0.919, CHB:1.0;0.775, JPT:1.0;0.635 FUNCTIONAL_SNP rs215639 chr7 32373639 Intergenic 5b 26304 CEU:1.0;0.906, CHB:1.0;0.845, JPT:1.0;0.635 FUNCTIONAL_SNP rs215694 chr7 32397026 Intergenic 6 49691 CEU:0.951;0.905, CHB:0.878;0.77, JPT:0.937;0.828 FUNCTIONAL_SNP rs412876 chr7 32395660 Intergenic 6 48325 CEU:1.0;0.959, CHB:0.835;0.697, JPT:0.943;0.842 FUNCTIONAL_SNP rs6955346 chr7 32369553 Intergenic 6 22218 CEU:1.0;0.916, CHB:1.0;0.775, JPT:1.0;0.577 FUNCTIONAL_SNP rs215670 chr7 32379218 Intergenic 6 31883 CEU:1.0;0.916, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs1653889 chr7 32386653 Intergenic 7 39318 CEU:0.953;0.907, CHB:0.884;0.741, JPT:0.879;0.773 FUNCTIONAL_SNP rs7778443 chr7 32314690 Intron 7 32645 CEU:0.913;0.8 FUNCTIONAL_SNP rs1668393 chr7 32393611 Intergenic 7 46276 CEU:0.952;0.907, CHB:0.884;0.741, JPT:0.88;0.663 FUNCTIONAL_SNP rs215596 chr7 32326373 Intron 7 20962 CEU:0.913;0.8 FUNCTIONAL_SNP rs215611 chr7 32341438 Intergenic 7 5897 CEU:1.0;0.958, CHB:1.0;0.849, JPT:1.0;0.947 FUNCTIONAL_SNP rs1450869 chr7 32311672 Intron 7 35663 CEU:0.915;0.838 FUNCTIONAL_SNP rs215669 chr7 32378979 Intergenic 7 31644 CEU:1.0;0.959, CHB:0.942;0.84, JPT:1.0;0.947 FUNCTIONAL_SNP rs1450870 chr7 32311726 Intron 7 35609 CEU:0.913;0.8 FUNCTIONAL_SNP rs215622 chr7 32357659 Intergenic 7 10324 CEU:1.0;0.919, CHB:1.0;0.775, JPT:1.0;0.635 FUNCTIONAL_SNP rs215629 chr7 32360464 Intergenic 7 13129 CEU:1.0;0.917, CHB:1.0;0.738, JPT:1.0;0.577 FUNCTIONAL_SNP rs215632 chr7 32368524 Intergenic 7 21189 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs215634 chr7 32369148 Intergenic 7 21813 CEU:1.0;0.959, CHB:1.0;0.849, JPT:1.0;0.947 FUNCTIONAL_SNP rs4368879 chr7 32307925 Intron 7 39410 CEU:0.907;0.822 FUNCTIONAL_SNP rs186229 chr7 32381557 Intergenic 7 34222 CEU:1.0;0.959, CHB:0.888;0.789, JPT:0.943;0.842 LEAD_SNP rs1362212 chr7 35305306 Intergenic 7 ASSOCIATION 21076409 Ventricular conduction 13.0 TBX20 - HERPUD2 FUNCTIONAL_SNP rs17607318 chr7 35338706 Intergenic 6 33400 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs1362211 chr7 35305167 Intergenic 6 139 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17607325 chr7 35338804 Intergenic 6 33498 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs17675262 chr7 35309097 Intergenic 6 3791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17607297 chr7 35338423 Intergenic 7 33117 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs34674704 chr7 35304501 Intergenic 7 805 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1014553 chr7 35319553 Intergenic 7 14247 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17675399 chr7 35322783 Intergenic 7 17477 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17607220 chr7 35328917 Intergenic 7 23611 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11764671 chr7 35316216 Intergenic 7 10910 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17675586 chr7 35340986 Intergenic 7 35680 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs13222114 chr7 35317404 Intergenic 7 12098 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1419856 chr7 35306983 Intergenic 7 1677 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17607123 chr7 35322670 Intergenic 7 17364 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2392362 chr7 35401447 Intergenic 6 ASSOCIATION 21130836 Information processing speed 5.69897000434 TBX20 - HERPUD2 LEAD_SNP rs343064 chr7 35554788 Intergenic 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 7.52287874528 TBX20 - HERPUD2 LEAD_SNP rs4302748 chr7 36191699 Intergenic 5b ASSOCIATION 21507922 Platelet counts 5.30102999566 EEPD1 LEAD_SNP rs6948404 chr7 36610493 Intron 5a ASSOCIATION 20205591 HIV-1 control 5.52287874528 AOAH FUNCTIONAL_SNP rs17478284 chr7 36609006 Intron 7 1487 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs741301 chr7 36917995 Intron 7 ASSOCIATION 17653210 Diabetic nephropathy 5.09691001301 ELMO1 LEAD_SNP rs10488031 chr7 37076854 Intron 7 ASSOCIATION 20031603 QT interval 5.69897000434 ELMO1 FUNCTIONAL_SNP rs17170862 chr7 37114024 Intron 4 37170 CEU:1.0;0.848, YRI:1.0;0.674 FUNCTIONAL_SNP rs17170842 chr7 37077758 Intron 5b 904 CEU:1.0;0.848, YRI:1.0;0.617 FUNCTIONAL_SNP rs7785575 chr7 37097476 Intron 5b 20622 CEU:1.0;0.848 FUNCTIONAL_SNP rs13239208 chr7 37099249 Intron 6 22395 CEU:1.0;0.825, YRI:1.0;1.0 FUNCTIONAL_SNP rs13242167 chr7 37076901 Intron 6 47 CEU:1.0;0.825, YRI:1.0;1.0 FUNCTIONAL_SNP rs6949716 chr7 37080817 Intron 6 3963 CEU:1.0;0.848, YRI:1.0;0.651 FUNCTIONAL_SNP rs6969566 chr7 37080818 Intron 6 3964 CEU:1.0;0.848, YRI:1.0;0.617 FUNCTIONAL_SNP rs17170841 chr7 37073212 Intron 7 3642 CEU:1.0;1.0, YRI:1.0;0.674 FUNCTIONAL_SNP rs17170843 chr7 37078931 Intron 7 2077 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13243711 chr7 37078698 Intron 7 1844 CEU:1.0;1.0, YRI:1.0;0.622 FUNCTIONAL_SNP rs13231302 chr7 37104329 Intron 7 27475 CEU:1.0;0.825 FUNCTIONAL_SNP rs6955605 chr7 37109868 Intron 7 33014 CEU:1.0;0.824 FUNCTIONAL_SNP rs6964470 chr7 37114852 Intron 7 37998 CEU:1.0;1.0 FUNCTIONAL_SNP rs13244412 chr7 37088296 Intron 7 11442 CEU:1.0;0.825 FUNCTIONAL_SNP rs7779582 chr7 37097747 Intron 7 20893 CEU:1.0;0.825, YRI:1.0;1.0 LEAD_SNP rs4723619 chr7 37266352 Intron 7 ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 5.52287874528 ELMO1 LEAD_SNP rs6974491 chr7 37374510 Intron 7 ASSOCIATION 21399635 Primary biliary cirrhosis 7.39794000867 ELMO1 ASSOCIATION 20190752 Celiac disease 6.69897000434 ELMO1 FUNCTIONAL_SNP rs17259544 chr7 37388813 Intron 3a 14303 CEU:1.0;0.913 FUNCTIONAL_SNP rs1962401 chr7 37377172 Intron 5a 2662 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17199391 chr7 37373313 Intron 5b 1197 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12537646 chr7 37374973 Intron 7 463 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11984075 chr7 37436854 Intron 7 ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 7.30102999566 ELMO1 FUNCTIONAL_SNP rs11979905 chr7 37437877 Intron 7 1023 CEU:1.0;0.879 FUNCTIONAL_SNP rs16879645 chr7 37400469 Intron 7 36385 CEU:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1524058 chr7 38136277 Intergenic 7 ASSOCIATION 19801982 Bone mineral density (spine) 9.0 EPDR1 - STARD3NL FUNCTIONAL_SNP rs1524068 chr7 38110626 Intergenic 2b 25651 CEU:1.0;0.835, CHB:1.0;0.658, JPT:1.0;0.663, YRI:1.0;0.671 FUNCTIONAL_SNP rs940347 chr7 38110425 Intergenic 4 25852 CEU:1.0;0.84, CHB:1.0;0.658, JPT:1.0;0.663, YRI:1.0;0.674 FUNCTIONAL_SNP rs1464712 chr7 38125584 Intergenic 5b 10693 CEU:1.0;0.84, CHB:1.0;0.658, JPT:1.0;0.663, YRI:0.856;0.554 FUNCTIONAL_SNP rs1403987 chr7 38111941 Intergenic 6 24336 CEU:1.0;0.84, CHB:1.0;0.658, JPT:1.0;0.663 FUNCTIONAL_SNP rs6956946 chr7 38110032 Intergenic 7 26245 CEU:1.0;0.84, CHB:1.0;0.658, JPT:1.0;0.663, YRI:1.0;0.674 FUNCTIONAL_SNP rs6963134 chr7 38144898 Intergenic 7 8621 CEU:1.0;0.84, CHB:1.0;0.658, JPT:1.0;0.663 FUNCTIONAL_SNP rs1403988 chr7 38109936 Intergenic 7 26341 CEU:1.0;0.84, YRI:1.0;0.719 FUNCTIONAL_SNP rs11972702 chr7 38147661 Intergenic 7 11384 CEU:1.0;0.84, CHB:1.0;0.65, JPT:1.0;0.663 FUNCTIONAL_SNP rs1524064 chr7 38141380 Intergenic 7 5103 CEU:1.0;0.84, CHB:1.0;0.673, JPT:1.0;0.704, YRI:1.0;0.653 FUNCTIONAL_SNP rs10280939 chr7 38120073 Intergenic 7 16204 CEU:1.0;0.84, CHB:1.0;0.616, JPT:1.0;0.661, YRI:0.845;0.512 FUNCTIONAL_SNP rs6959212 chr7 38128326 Intergenic 7 7951 CEU:1.0;0.84, CHB:1.0;0.681, JPT:1.0;0.663, YRI:1.0;0.665 FUNCTIONAL_SNP rs6974574 chr7 38110073 Intergenic 7 26204 CEU:1.0;0.84, CHB:1.0;0.658, JPT:1.0;0.663, YRI:1.0;0.692 FUNCTIONAL_SNP rs1357651 chr7 38097862 Intergenic 7 38415 CEU:1.0;0.84, CHB:1.0;0.647, JPT:1.0;0.689, YRI:0.948;0.616 LEAD_SNP rs11984145 chr7 38835035 Intron 6 ASSOCIATION 19734545 Cognitive performance 5.22184874962 VPS41 LEAD_SNP rs29880 chr7 40954481 Intergenic 6 ASSOCIATION 19084217 Serum markers of iron status 5.15490195999 C7orf10 - INHBA FUNCTIONAL_SNP rs29886 chr7 40961250 Intergenic 5b 6769 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs29875 chr7 40947332 Intergenic 7 7149 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs39582 chr7 40953319 Intergenic 7 1162 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1079866 chr7 41470093 Intergenic 6 ASSOCIATION 21102462 Menarche (age at onset) 13.2218487496 C7orf10 - INHBA LEAD_SNP rs10486715 chr7 41478608 Intergenic 5a ASSOCIATION 19197348 Quantitative traits 5.52287874528 C7orf10 - INHBA LEAD_SNP rs730497 chr7 44223721 Intron 7 ASSOCIATION 19096518 Glycated hemoglobin levels 11.2218487496 GCK FUNCTIONAL_SNP rs1004558 chr7 44240407 Intergenic 2b 16686 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.812 FUNCTIONAL_SNP rs917793 chr7 44245853 Intron 5b 22132 CEU:1.0;1.0, CHB:1.0;0.93, JPT:0.842;0.659 FUNCTIONAL_SNP rs2908289 chr7 44223942 Intron 5b 221 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.644 FUNCTIONAL_SNP rs1799884 chr7 44229068 Intron 5b 5347 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs6975024 chr7 44231886 Intron 5b 8165 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.93 FUNCTIONAL_SNP rs2971668 chr7 44243438 Intron 5b 19717 CEU:1.0;1.0, CHB:1.0;0.874, JPT:0.838;0.61, YRI:1.0;0.522 FUNCTIONAL_SNP rs2908282 chr7 44248828 Intron 5b 25107 CEU:1.0;1.0, CHB:1.0;0.933, JPT:0.843;0.661, YRI:1.0;0.68 FUNCTIONAL_SNP rs4607517 chr7 44235668 Intron 5b 11947 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.812 FUNCTIONAL_SNP rs2971669 chr7 44231778 Intron 6 8057 CEU:1.0;0.889, CHB:1.0;0.548 LEAD_SNP rs1799884 chr7 44229068 Intron 5b ASSOCIATION 20858683 Glycated hemoglobin levels 20.0 GCK FUNCTIONAL_SNP rs1004558 chr7 44240407 Intergenic 2b 11339 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.812 FUNCTIONAL_SNP rs2908289 chr7 44223942 Intron 5b 5126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.552 FUNCTIONAL_SNP rs917793 chr7 44245853 Intron 5b 16785 CEU:1.0;1.0, CHB:1.0;0.93, JPT:0.842;0.659 FUNCTIONAL_SNP rs6975024 chr7 44231886 Intron 5b 2818 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.93 FUNCTIONAL_SNP rs2971668 chr7 44243438 Intron 5b 14370 CEU:1.0;1.0, CHB:1.0;0.874, JPT:0.838;0.61 FUNCTIONAL_SNP rs2908282 chr7 44248828 Intron 5b 19760 CEU:1.0;1.0, CHB:1.0;0.933, JPT:0.843;0.661, YRI:1.0;0.582 FUNCTIONAL_SNP rs4607517 chr7 44235668 Intron 5b 6600 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.812 FUNCTIONAL_SNP rs2971669 chr7 44231778 Intron 6 2710 CEU:1.0;0.889, CHB:1.0;0.548 FUNCTIONAL_SNP rs730497 chr7 44223721 Intron 7 5347 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 LEAD_SNP rs4607517 chr7 44235668 Intron 5b ASSOCIATION 20081858 Fasting glucose-related traits 91.15490196 GCK - YKT6 ASSOCIATION 20081858 Fasting glucose-related traits 15.6989700043 GCK - YKT6 ASSOCIATION 19060907 Fasting plasma glucose 25.0 GCK - YKT6 FUNCTIONAL_SNP rs1004558 chr7 44240407 Intergenic 2b 4739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2908289 chr7 44223942 Intron 5b 11726 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.812 FUNCTIONAL_SNP rs1799884 chr7 44229068 Intron 5b 6600 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.812 FUNCTIONAL_SNP rs917793 chr7 44245853 Intron 5b 10185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.872 FUNCTIONAL_SNP rs6975024 chr7 44231886 Intron 5b 3782 CEU:1.0;1.0, CHB:0.931;0.867, JPT:0.924;0.744, YRI:1.0;1.0 FUNCTIONAL_SNP rs2971668 chr7 44243438 Intron 5b 7770 CEU:1.0;1.0, CHB:1.0;0.936, JPT:0.929;0.807 FUNCTIONAL_SNP rs2908282 chr7 44248828 Intron 5b 13160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.873 FUNCTIONAL_SNP rs2971669 chr7 44231778 Intron 6 3890 CEU:1.0;0.889, CHB:1.0;0.587 FUNCTIONAL_SNP rs730497 chr7 44223721 Intron 7 11947 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.812 LEAD_SNP rs11977526 chr7 46008110 Intergenic 7 ASSOCIATION 21216879 Insulin-like growth factors 100.522878745 IGFBP3 - RNU7-76P FUNCTIONAL_SNP rs2965069 chr7 46018146 Intron 2b 10036 CEU:1.0;0.804, CHB:0.806;0.548, JPT:1.0;0.895 FUNCTIONAL_SNP rs2949837 chr7 45994378 Intergenic 6 13732 CEU:1.0;0.804, JPT:0.938;0.713 FUNCTIONAL_SNP rs2949833 chr7 45984820 Intergenic 7 23290 CEU:1.0;0.804, JPT:0.936;0.674 FUNCTIONAL_SNP rs10260816 chr7 46010100 Intron 7 1990 CEU:1.0;0.95, CHB:1.0;0.723, JPT:1.0;1.0, YRI:1.0;0.661 LEAD_SNP rs6964415 chr7 46242583 Intergenic 6 ASSOCIATION 21658281 Sudden cardiac arrest 6.30102999566 TTC4P1 - EPS15L2 FUNCTIONAL_SNP rs1979533 chr7 46242089 Intergenic 5b 494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7793447 chr7 46238097 Intergenic 7 4486 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6976880 chr7 46241570 Intergenic 7 1013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs6971381 chr7 46240548 Intergenic 7 2035 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17172664 chr7 46238624 Intergenic 7 3959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1486139 chr7 46275728 Intergenic 7 ASSOCIATION 17903293 Select biomarker traits 5.69897000434 TTC4P1 - EPS15L2 FUNCTIONAL_SNP rs10274091 chr7 46279591 Intergenic 2c 3863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9639947 chr7 46277498 Intergenic 5a 1770 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9791567 chr7 46276336 Intergenic 5b 608 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1601546 chr7 46278916 Intergenic 6 3188 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10253520 chr7 46276188 Intergenic 6 460 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4398811 chr7 46276978 Intergenic 6 1250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1903673 chr7 46282628 Intergenic 6 6900 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10231107 chr7 46273957 Intergenic 6 1771 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs723289 chr7 46283474 Intergenic 6 7746 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.932 FUNCTIONAL_SNP rs1601545 chr7 46279037 Intergenic 7 3309 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9639950 chr7 46281421 Intergenic 7 5693 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1903671 chr7 46282312 Intergenic 7 6584 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1903672 chr7 46282452 Intergenic 7 6724 CEU:0.958;0.918, CHB:1.0;1.0, JPT:1.0;0.919, YRI:1.0;0.932 FUNCTIONAL_SNP rs9639004 chr7 46282865 Intergenic 7 7137 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.935 FUNCTIONAL_SNP rs7781537 chr7 46276588 Intergenic 7 860 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.927;0.859 FUNCTIONAL_SNP rs1586359 chr7 46280883 Intergenic 7 5155 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs10278159 chr7 46280381 Intergenic 7 4653 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.935 FUNCTIONAL_SNP rs1486140 chr7 46275637 Intergenic 7 91 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs7798184 chr7 46276531 Intergenic 7 803 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4544999 chr7 46277088 Intergenic 7 1360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10235384 chr7 46275044 Intergenic 7 684 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10235898 chr7 46275453 Intergenic 7 275 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1601532 chr7 46278192 Intergenic 7 2464 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1601534 chr7 46274716 Intergenic 7 1012 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7784776 chr7 46620145 Intergenic 7 ASSOCIATION 21076409 Ventricular conduction 9.0 TTC4P1 - EPS15L2 FUNCTIONAL_SNP rs4720545 chr7 46620552 Intergenic 4 407 CEU:1.0;0.923, CHB:1.0;0.869, JPT:1.0;1.0 FUNCTIONAL_SNP rs6959696 chr7 46616776 Intergenic 4 3369 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.887 FUNCTIONAL_SNP rs12673771 chr7 46637249 Intergenic 5a 17104 CEU:0.957;0.812, JPT:0.86;0.585 FUNCTIONAL_SNP rs10261793 chr7 46612609 Intergenic 5b 7536 CEU:1.0;0.923, CHB:1.0;0.869, JPT:1.0;0.939 FUNCTIONAL_SNP rs17172722 chr7 46620312 Intergenic 5b 167 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.744 FUNCTIONAL_SNP rs10951858 chr7 46623843 Intergenic 6 3698 CEU:1.0;0.96, JPT:1.0;1.0 FUNCTIONAL_SNP rs6968945 chr7 46640900 Intergenic 6 20755 CEU:0.957;0.812, CHB:0.76;0.501, JPT:0.86;0.585 FUNCTIONAL_SNP rs11769224 chr7 46630354 Intergenic 7 10209 CEU:0.957;0.812, JPT:0.856;0.577 FUNCTIONAL_SNP rs2195884 chr7 46613773 Intergenic 7 6372 CEU:1.0;0.874, CHB:1.0;0.844, JPT:1.0;1.0 FUNCTIONAL_SNP rs2195885 chr7 46610911 Intergenic 7 9234 CEU:1.0;0.923, CHB:1.0;0.869, JPT:1.0;0.939 FUNCTIONAL_SNP rs6975022 chr7 46612033 Intergenic 7 8112 CEU:1.0;0.923, CHB:1.0;0.869, JPT:1.0;0.939 FUNCTIONAL_SNP rs11773764 chr7 46610034 Intergenic 7 10111 CEU:1.0;0.918, CHB:0.924;0.853, JPT:1.0;1.0 FUNCTIONAL_SNP rs6945953 chr7 46618901 Intergenic 7 1244 CEU:1.0;0.923, CHB:1.0;0.869, JPT:1.0;1.0 FUNCTIONAL_SNP rs6964695 chr7 46617526 Intergenic 7 2619 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0 FUNCTIONAL_SNP rs7805563 chr7 46624481 Intergenic 7 4336 CEU:0.958;0.919, JPT:1.0;1.0 FUNCTIONAL_SNP rs6964853 chr7 46617615 Intergenic 7 2530 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs4724472 chr7 46628578 Intergenic 7 8433 CEU:0.959;0.92, JPT:1.0;1.0 LEAD_SNP rs700752 chr7 46753553 Intron 4 ASSOCIATION 21216879 Insulin-like growth factors 20.3979400087 TTC4P1 - EPS15L2 ASSOCIATION 21216879 Insulin-like growth factors 8.30102999566 TTC4P1 - EPS15L2 FUNCTIONAL_SNP rs700750 chr7 46753491 Intron 4 62 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.918 FUNCTIONAL_SNP rs700753 chr7 46753684 Intron 4 131 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs856560 chr7 46726963 Intergenic 5b 26590 CEU:0.955;0.874, CHB:1.0;0.846 FUNCTIONAL_SNP rs856540 chr7 46708387 Intergenic 7 45166 CEU:0.954;0.8, CHB:0.834;0.527 FUNCTIONAL_SNP rs856563 chr7 46723510 Intergenic 7 30043 CEU:0.955;0.874, CHB:1.0;0.846 LEAD_SNP rs7805803 chr7 50225391 Intergenic 7 ASSOCIATION 21116278 Total ventricular volume 5.04575749056 C7orf72 - IKZF1 LEAD_SNP rs1456893 chr7 50269672 Intergenic 4 ASSOCIATION 18587394 Crohn's disease 8.30102999566 C7orf72 - IKZF1 FUNCTIONAL_SNP rs748374 chr7 50268043 Intergenic 4 1629 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2124799 chr7 50270014 Intergenic 5b 342 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs981132 chr7 50281539 Intergenic 7 11867 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6583435 chr7 50293405 Intergenic 7 23733 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.959 LEAD_SNP rs4917014 chr7 50305863 Intergenic 5b ASSOCIATION 19838193 Systemic lupus erythematosus 22.5228787453 C7orf72 - IKZF1 FUNCTIONAL_SNP rs11185603 chr7 50306810 Intergenic 2b 947 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10276619 chr7 50313352 Intergenic 7 ASSOCIATION 19668339 Hippocampal atrophy 5.52287874528 C7orf72 - IKZF1 LEAD_SNP rs12718597 chr7 50428428 Intron 3a ASSOCIATION 19862010 Mean corpuscular volume 12.3010299957 IKZF1 - FIGNL1 FUNCTIONAL_SNP rs12669559 chr7 50435777 Coding 7 7349 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12534526 chr7 50426097 Intron 5b 2331 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.674, YRI:1.0;0.95 FUNCTIONAL_SNP rs7385935 chr7 50430871 Intron 7 2443 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.935 LEAD_SNP rs11978267 chr7 50466304 Intron 5b ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 10.096910013 IKZF1 FUNCTIONAL_SNP rs10278451 chr7 50468952 Exon,non-coding 5b 2648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.695, YRI:0.938;0.828 FUNCTIONAL_SNP rs11980379 chr7 50469981 Exon,non-coding 5b 3677 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:0.938;0.829 FUNCTIONAL_SNP rs11980407 chr7 50471613 Exon,non-coding 7 5309 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:0.935;0.821 FUNCTIONAL_SNP rs4132601 chr7 50470604 Exon,non-coding 5b 4300 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:0.938;0.829 FUNCTIONAL_SNP rs17133807 chr7 50477687 Intergenic 2b 11383 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:0.877;0.768 FUNCTIONAL_SNP rs6964969 chr7 50473251 Intergenic 4 6947 CEU:1.0;1.0, CHB:0.918;0.843, JPT:1.0;1.0, YRI:0.938;0.829 FUNCTIONAL_SNP rs6973210 chr7 50466695 Intron 5b 391 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.888 FUNCTIONAL_SNP rs1110701 chr7 50478627 Intergenic 5b 12323 CEU:1.0;0.842, CHB:1.0;0.92, JPT:1.0;1.0 FUNCTIONAL_SNP rs10264390 chr7 50475321 Intergenic 5b 9017 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:0.816;0.666 FUNCTIONAL_SNP rs10272724 chr7 50477213 Intergenic 5b 10909 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:0.805;0.609 LEAD_SNP rs4132601 chr7 50470604 Exon,non-coding 5b ASSOCIATION 19684604 Acute lymphoblastic leukemia (childhood) 19.0 IKZF1 FUNCTIONAL_SNP rs10278451 chr7 50468952 Exon,non-coding 5b 1652 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;0.695, YRI:1.0;1.0 FUNCTIONAL_SNP rs11980379 chr7 50469981 Exon,non-coding 5b 623 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11980407 chr7 50471613 Exon,non-coding 7 1009 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17133807 chr7 50477687 Intergenic 2b 7083 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.875;0.72 FUNCTIONAL_SNP rs6964969 chr7 50473251 Intergenic 4 2647 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6973210 chr7 50466695 Intron 5b 3909 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs11978267 chr7 50466304 Intron 5b 4300 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:0.938;0.829 FUNCTIONAL_SNP rs1110701 chr7 50478627 Intergenic 5b 8023 CEU:1.0;0.842, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10264390 chr7 50475321 Intergenic 5b 4717 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.938;0.829 FUNCTIONAL_SNP rs10272724 chr7 50477213 Intergenic 5b 6609 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.803;0.57 LEAD_SNP rs1451375 chr7 50622712 Intron 5b ASSOCIATION 19465909 Malaria 5.22184874962 DDC FUNCTIONAL_SNP rs2329342 chr7 50624971 Intron 5b 2259 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1451373 chr7 50622606 Intron 5b 106 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1451374 chr7 50622653 Intron 5b 59 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs4452748 chr7 50625056 Intron 5b 2344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1966839 chr7 50627101 Intron 6 4389 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2329340 chr7 50620229 Intron 6 2483 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs921451 chr7 50623285 Intron 6 573 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6949897 chr7 50621920 Intron 7 792 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs10250513 chr7 50621488 Intron 7 1224 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs921450 chr7 50623260 Intron 7 548 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4948088 chr7 51027194 Intron 7 ASSOCIATION 19430480 Type 1 diabetes 7.39794000867 RPL39P23 - COBL LEAD_SNP rs1012036 chr7 52472450 Intergenic 7 ASSOCIATION 20709820 Emphysema-related traits 5.30102999566 COBL - POM121L12 FUNCTIONAL_SNP rs12155332 chr7 52475283 Intergenic 6 2833 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1012037 chr7 52472740 Intergenic 6 290 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6593122 chr7 54181932 Intergenic 7 ASSOCIATION 21396408 Vaccine-related adverse events 5.39794000867 FLJ45974 - HPVC1 FUNCTIONAL_SNP rs2177549 chr7 54184061 Intergenic 6 2129 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs6944870 chr7 54163222 Intergenic 6 18710 CEU:1.0;0.89, CHB:1.0;1.0, YRI:0.911;0.658 FUNCTIONAL_SNP rs1916972 chr7 54186167 Intergenic 7 4235 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.619 FUNCTIONAL_SNP rs6968968 chr7 54194727 Intergenic 7 12795 CEU:1.0;0.858, CHB:1.0;1.0, YRI:0.93;0.865 FUNCTIONAL_SNP rs6960827 chr7 54202305 Intergenic 7 20373 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.731 FUNCTIONAL_SNP rs13230426 chr7 54131363 Intergenic 7 50569 CEU:0.943;0.842 FUNCTIONAL_SNP rs17560456 chr7 54174128 Intergenic 7 7804 CEU:1.0;0.908, CHB:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2252586 chr7 54978924 Intergenic 5b ASSOCIATION 21531791 Glioma 7.09691001301 SEC61G - EGFR FUNCTIONAL_SNP rs7793272 chr7 54966059 Intergenic 5b 12865 CEU:1.0;0.893, CHB:1.0;0.659 FUNCTIONAL_SNP rs2538066 chr7 54973910 Intergenic 6 5014 CEU:1.0;0.948 FUNCTIONAL_SNP rs2330759 chr7 54980346 Intergenic 7 1422 CEU:1.0;0.948 FUNCTIONAL_SNP rs6593195 chr7 54964394 Intergenic 7 14530 CEU:1.0;0.894, CHB:1.0;0.659 FUNCTIONAL_SNP rs6945082 chr7 54958458 Intergenic 7 20466 CEU:0.942;0.888 FUNCTIONAL_SNP rs6946428 chr7 54958609 Intergenic 7 20315 CEU:0.943;0.841, CHB:1.0;0.659 LEAD_SNP rs11979158 chr7 55159349 Intron 5b ASSOCIATION 21531791 Glioma 7.15490195999 EGFR FUNCTIONAL_SNP rs759170 chr7 55155372 Intron 2b 3977 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10488140 chr7 55138388 Intron 4 20961 CEU:0.934;0.819 FUNCTIONAL_SNP rs17172437 chr7 55149810 Intron 4 9539 CEU:1.0;1.0, YRI:1.0;0.843 FUNCTIONAL_SNP rs11984267 chr7 55153693 Intron 5a 5656 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11974185 chr7 55153708 Intron 5a 5641 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11979406 chr7 55156447 Intron 5b 2902 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7785013 chr7 55152667 Intron 5b 6682 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17586365 chr7 55140786 Intron 5b 18563 CEU:1.0;0.936 FUNCTIONAL_SNP rs11977299 chr7 55153775 Intron 5b 5574 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17172438 chr7 55151537 Intron 5b 7812 CEU:1.0;0.939, YRI:1.0;0.886 FUNCTIONAL_SNP rs17172440 chr7 55156010 Intron 5b 3339 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17172441 chr7 55157028 Intron 5b 2321 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10245472 chr7 55147478 Intron 5b 11871 CEU:1.0;1.0, YRI:1.0;0.652 FUNCTIONAL_SNP rs17172435 chr7 55146471 Intron 5b 12878 CEU:1.0;1.0, YRI:0.901;0.571 FUNCTIONAL_SNP rs17172433 chr7 55142435 Intron 6 16914 CEU:1.0;0.861, YRI:0.945;0.65 FUNCTIONAL_SNP rs729969 chr7 55128207 Intron 7 31142 CEU:0.931;0.812, YRI:0.802;0.518 LEAD_SNP rs10266483 chr7 63733331 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 5.09691001301 ZNF679 - ZNF736 FUNCTIONAL_SNP rs624257 chr7 63745226 Intergenic 6 11895 CEU:0.957;0.879, YRI:1.0;0.951 FUNCTIONAL_SNP rs683689 chr7 63742543 Intergenic 6 9212 CEU:1.0;0.96, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs6972236 chr7 63732175 Intergenic 6 1156 CEU:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs687547 chr7 63744929 Intergenic 6 11598 CEU:0.957;0.879, YRI:1.0;0.951 FUNCTIONAL_SNP rs679883 chr7 63750368 Intergenic 6 17037 CEU:1.0;0.959, JPT:1.0;0.611, YRI:1.0;0.725 FUNCTIONAL_SNP rs651934 chr7 63744350 Intergenic 7 11019 CEU:1.0;0.959, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs1960321 chr7 63731284 Intergenic 7 2047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13221291 chr7 63739492 Intergenic 7 6161 CEU:0.958;0.882, YRI:1.0;0.913 FUNCTIONAL_SNP rs683510 chr7 63749361 Intergenic 7 16030 CEU:1.0;0.959, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.769 FUNCTIONAL_SNP rs667644 chr7 63750558 Intergenic 7 17227 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.784 LEAD_SNP rs875971 chr7 65617595 Exon,non-coding 3a ASSOCIATION 21223598 Aortic root size 5.39794000867 CRCP FUNCTIONAL_SNP rs6946143 chr7 65579722 Exon,non-coding 2a 37873 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6961717 chr7 65587537 Intron 4 30058 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7801282 chr7 65613687 Intron 4 3908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11974219 chr7 65647410 Intergenic 5b 29815 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2220626 chr7 65546062 Intron 5b 71533 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2087647 chr7 65593188 Intron 5b 24407 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs587360 chr7 65522698 Intergenic 7 94897 CEU:0.959;0.884, CHB:1.0;0.951, JPT:1.0;0.948, YRI:1.0;0.901 FUNCTIONAL_SNP rs1565531 chr7 65663113 Intergenic 7 45518 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6958484 chr7 65599446 Intron 7 18149 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6963646 chr7 65685767 Intron 7 68172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs427973 chr7 65526648 Intergenic 7 90947 CEU:0.919;0.844, CHB:1.0;0.951, JPT:1.0;0.946, YRI:1.0;0.904 LEAD_SNP rs801193 chr7 66030612 Intergenic 6 ASSOCIATION 21223598 Aortic root size 5.39794000867 SKP1P1 - RPL35P5 FUNCTIONAL_SNP rs3800820 chr7 66147178 Intergenic 2b 116566 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6460308 chr7 66084740 Intergenic 4 54128 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2302918 chr7 66000932 Intron 4 29680 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2707854 chr7 66212597 Intron 5a 181985 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs2659906 chr7 66165310 Intergenic 5b 134698 CEU:1.0;1.0, CHB:1.0;0.809, JPT:1.0;0.848, YRI:1.0;0.953 FUNCTIONAL_SNP rs10234018 chr7 66146284 Intergenic 5b 115672 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10249404 chr7 66046724 Intergenic 5b 16112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs2707836 chr7 66160435 Intergenic 5b 129823 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs2707853 chr7 66214010 Intron 5b 183398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs801205 chr7 66022144 Intergenic 5b 8468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2659915 chr7 66153101 Intergenic 6 122489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6958520 chr7 66151453 Intergenic 6 120841 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs3800812 chr7 66223461 Intron 6 192849 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs2707856 chr7 66211010 Intron 6 180398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs2191268 chr7 66110224 Intergenic 6 79612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.953 FUNCTIONAL_SNP rs801211 chr7 66015689 Intergenic 6 14923 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10252765 chr7 66228732 Intron 6 198120 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs3764903 chr7 66098482 Intron 7 67870 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10215132 chr7 66054406 Intergenic 7 23794 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4717310 chr7 66161007 Intergenic 7 130395 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs2707845 chr7 66198798 Intergenic 7 168186 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs6460305 chr7 66060408 Intergenic 7 29796 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs10950044 chr7 66042976 Intergenic 7 12364 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7793569 chr7 66116633 Intergenic 7 86021 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs801217 chr7 66010577 Intergenic 7 20035 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6943696 chr7 66048285 Intergenic 7 17673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10263935 chr7 66096028 Intron 7 65416 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12698534 chr7 65986845 Intergenic 7 43767 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10263935 chr7 66096028 Intron 7 ASSOCIATION 21223598 Aortic root size 6.39794000867 KCTD7 FUNCTIONAL_SNP rs3800820 chr7 66147178 Intergenic 2b 51150 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6460308 chr7 66084740 Intergenic 4 11288 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2302918 chr7 66000932 Intron 4 95096 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2707854 chr7 66212597 Intron 5a 116569 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs2659906 chr7 66165310 Intergenic 5b 69282 CEU:1.0;1.0, CHB:1.0;0.809, JPT:1.0;0.848, YRI:1.0;0.954 FUNCTIONAL_SNP rs10234018 chr7 66146284 Intergenic 5b 50256 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10249404 chr7 66046724 Intergenic 5b 49304 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs2707853 chr7 66214010 Intron 5b 117982 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2707836 chr7 66160435 Intergenic 5b 64407 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs801205 chr7 66022144 Intergenic 5b 73884 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2659915 chr7 66153101 Intergenic 6 57073 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10215516 chr7 66258080 Intron 6 162052 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.952;0.906 FUNCTIONAL_SNP rs3800812 chr7 66223461 Intron 6 127433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs4717319 chr7 66242593 Intron 6 146565 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs2707856 chr7 66211010 Intron 6 114982 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs2191268 chr7 66110224 Intergenic 6 14196 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.959 FUNCTIONAL_SNP rs801193 chr7 66030612 Intergenic 6 65416 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6958520 chr7 66151453 Intergenic 6 55425 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs801211 chr7 66015689 Intergenic 6 80339 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10252765 chr7 66228732 Intron 6 132704 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs3764903 chr7 66098482 Intron 7 2454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10215132 chr7 66054406 Intergenic 7 41622 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4717310 chr7 66161007 Intergenic 7 64979 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.925, YRI:1.0;1.0 FUNCTIONAL_SNP rs2707845 chr7 66198798 Intergenic 7 102770 CEU:1.0;0.964, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs6460305 chr7 66060408 Intergenic 7 35620 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs10950044 chr7 66042976 Intergenic 7 53052 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7793569 chr7 66116633 Intergenic 7 20605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs801217 chr7 66010577 Intergenic 7 85451 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6943696 chr7 66048285 Intergenic 7 47743 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12698534 chr7 65986845 Intergenic 7 109183 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10263639 chr7 67059267 Intergenic 7 ASSOCIATION 17903305 Breast cancer 5.52287874528 STAG3L4 - AUTS2 FUNCTIONAL_SNP rs10270452 chr7 67058772 Intergenic 5a 495 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6961611 chr7 67426323 Intergenic 7 ASSOCIATION 21130836 Information processing speed 5.15490195999 STAG3L4 - AUTS2 FUNCTIONAL_SNP rs7458704 chr7 67422093 Intergenic 6 4230 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.745 FUNCTIONAL_SNP rs6971706 chr7 67426093 Intergenic 6 230 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17749302 chr7 67425742 Intergenic 7 581 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.745 FUNCTIONAL_SNP rs6970714 chr7 67426147 Intergenic 7 176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11975966 chr7 67425355 Intergenic 7 968 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.745 FUNCTIONAL_SNP rs11975967 chr7 67425369 Intergenic 7 954 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.745 LEAD_SNP rs6943555 chr7 69806023 Intron 6 ASSOCIATION 21471458 Alcohol consumption 7.39794000867 AUTS2 FUNCTIONAL_SNP rs10486875 chr7 69819103 Intron 4 13080 CEU:1.0;1.0, CHB:1.0;0.744, JPT:1.0;0.744 FUNCTIONAL_SNP rs10251416 chr7 69806314 Intron 5b 291 CEU:1.0;1.0, CHB:1.0;0.744, JPT:1.0;0.744 FUNCTIONAL_SNP rs10256062 chr7 69787054 Intron 5b 18969 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10237685 chr7 69817082 Intron 5b 11059 CEU:1.0;1.0, CHB:1.0;0.744, JPT:1.0;0.744 FUNCTIONAL_SNP rs12698895 chr7 69778828 Intron 5b 27195 CEU:1.0;1.0, CHB:1.0;0.744, JPT:1.0;0.735, YRI:0.95;0.517 FUNCTIONAL_SNP rs2103132 chr7 69782073 Intron 5b 23950 CEU:1.0;1.0, CHB:0.94;0.691, JPT:0.929;0.684, YRI:0.95;0.517 FUNCTIONAL_SNP rs1404274 chr7 69784370 Intron 5b 21653 CEU:1.0;1.0, CHB:1.0;0.721, JPT:1.0;0.737 FUNCTIONAL_SNP rs13221252 chr7 69763456 Intron 5b 42567 CEU:1.0;0.826, CHB:1.0;0.744, JPT:1.0;0.79, YRI:0.958;0.759 FUNCTIONAL_SNP rs10229155 chr7 69799959 Intron 5b 6064 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10950199 chr7 69764103 Intron 6 41920 CEU:1.0;0.921, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10486874 chr7 69810651 Intron 6 4628 CEU:1.0;1.0, CHB:1.0;0.744, JPT:1.0;0.744 FUNCTIONAL_SNP rs2280614 chr7 69755860 Intron 6 50163 CEU:1.0;0.879, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs12698876 chr7 69696738 Intron 6 109285 CEU:1.0;0.826, CHB:1.0;0.744, JPT:1.0;0.697 FUNCTIONAL_SNP rs1474368 chr7 69707623 Intron 6 98400 CEU:1.0;0.827, CHB:1.0;0.744, JPT:1.0;0.697, YRI:0.902;0.52 FUNCTIONAL_SNP rs7790934 chr7 69701965 Intron 6 104058 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs6953344 chr7 69789374 Intron 6 16649 CEU:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs10235781 chr7 69606936 Intron 6 199087 CEU:1.0;0.879, CHB:1.0;0.744, JPT:1.0;0.697 FUNCTIONAL_SNP rs6950647 chr7 69648162 Intron 6 157861 CEU:1.0;0.878, CHB:1.0;0.744, JPT:1.0;0.697 FUNCTIONAL_SNP rs1464786 chr7 69805412 Intron 6 611 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10234844 chr7 69811212 Intron 6 5189 CEU:1.0;1.0, CHB:1.0;0.744, JPT:1.0;0.744, YRI:0.917;0.722 FUNCTIONAL_SNP rs10268924 chr7 69647225 Intron 6 158798 CEU:1.0;0.879, CHB:1.0;0.744, JPT:1.0;0.697 FUNCTIONAL_SNP rs7799308 chr7 69773791 Intron 7 32232 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6969375 chr7 69721267 Intron 7 84756 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs10234892 chr7 69761364 Intron 7 44659 CEU:1.0;0.876, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9918544 chr7 69799485 Intron 7 6538 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2866278 chr7 69822972 Intron 7 16949 CEU:1.0;0.897, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8180850 chr7 69768233 Intron 7 37790 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.509 FUNCTIONAL_SNP rs6460542 chr7 69775270 Intron 7 30753 CEU:1.0;0.879, CHB:1.0;0.744, JPT:1.0;0.744, YRI:0.95;0.517 FUNCTIONAL_SNP rs6460543 chr7 69793640 Intron 7 12383 CEU:1.0;1.0, CHB:1.0;0.744, JPT:1.0;0.744 FUNCTIONAL_SNP rs2280613 chr7 69755741 Intron 7 50282 CEU:1.0;0.879, CHB:1.0;0.738, JPT:1.0;0.744, YRI:0.915;0.717 FUNCTIONAL_SNP rs6961345 chr7 69659629 Intron 7 146394 CEU:1.0;0.879, CHB:1.0;0.744, JPT:1.0;0.697 FUNCTIONAL_SNP rs7798991 chr7 69773395 Intron 7 32628 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10499812 chr7 69653990 Intron 7 152033 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs10234614 chr7 69761157 Intron 7 44866 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12698871 chr7 69674455 Intron 7 131568 CEU:1.0;0.827, CHB:1.0;0.744, JPT:1.0;0.697 FUNCTIONAL_SNP rs12155138 chr7 69766519 Intron 7 39504 CEU:1.0;0.879, CHB:1.0;0.744, JPT:1.0;0.744 FUNCTIONAL_SNP rs12698896 chr7 69779149 Intron 7 26874 CEU:1.0;1.0, CHB:1.0;0.732, JPT:1.0;0.774, YRI:1.0;0.961 FUNCTIONAL_SNP rs12698899 chr7 69802419 Intron 7 3604 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10229027 chr7 69799863 Intron 7 6160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.517 FUNCTIONAL_SNP rs6975279 chr7 69649683 Intron 7 156340 CEU:1.0;0.878, CHB:1.0;0.744, JPT:1.0;0.697 FUNCTIONAL_SNP rs1880368 chr7 69785604 Intron 7 20419 CEU:1.0;1.0, CHB:1.0;0.744, JPT:1.0;0.744, YRI:0.95;0.517 FUNCTIONAL_SNP rs10256186 chr7 69641784 Intron 7 164239 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs7792964 chr7 69729661 Intron 7 76362 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs3846984 chr7 69759532 Intron 7 46491 CEU:1.0;0.879, CHB:1.0;0.744, JPT:1.0;0.744 FUNCTIONAL_SNP rs873835 chr7 69681178 Intron 7 124845 CEU:1.0;0.827, CHB:1.0;0.744, JPT:1.0;0.697 FUNCTIONAL_SNP rs7796080 chr7 69647562 Intron 7 158461 CEU:1.0;0.879, CHB:1.0;0.744, JPT:1.0;0.697 FUNCTIONAL_SNP rs6967697 chr7 69791210 Intron 7 14813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13226923 chr7 69810712 Intron 7 4689 CEU:1.0;0.925, CHB:1.0;0.695, JPT:1.0;0.744 FUNCTIONAL_SNP rs1357759 chr7 69780256 Intron 7 25767 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2222544 chr7 69769369 Intron 7 36654 CEU:1.0;0.878, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1464787 chr7 69806700 Intron 7 677 CEU:1.0;1.0, CHB:1.0;0.744, JPT:1.0;0.744 FUNCTIONAL_SNP rs1464788 chr7 69806895 Intron 7 872 CEU:1.0;1.0, CHB:1.0;0.744, JPT:1.0;0.744 FUNCTIONAL_SNP rs10246631 chr7 69804574 Intron 7 1449 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10254839 chr7 69791367 Intron 7 14656 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2240466 chr7 72856269 Exon,non-coding 5a ASSOCIATION 21490707 Caffeine consumption 6.0 BAZ1B ASSOCIATION 19060911 Triglycerides 12.0 BAZ1B FUNCTIONAL_SNP rs13246490 chr7 72992350 Exon,non-coding 4 136081 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.72 FUNCTIONAL_SNP rs13233571 chr7 72971231 Intron 4 114962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811, YRI:1.0;1.0 FUNCTIONAL_SNP rs13232120 chr7 72983310 Intergenic 5a 127041 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811 FUNCTIONAL_SNP rs17145738 chr7 72982874 Intergenic 5b 126605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811 FUNCTIONAL_SNP rs13231516 chr7 72863249 Intron 5b 6980 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17145750 chr7 73026378 Intron 6 170109 CEU:1.0;0.847, CHB:1.0;0.779, JPT:0.879;0.627 FUNCTIONAL_SNP rs714052 chr7 72864869 Intron 6 8600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12056034 chr7 72878645 Intron 6 22376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13244268 chr7 72911843 Intron 6 55574 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2074755 chr7 72877166 Intron 7 20897 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1178979 chr7 72856430 Exon,non-coding 5b ASSOCIATION 20864672 Triglycerides 11.6989700043 BAZ1B FUNCTIONAL_SNP rs1051921 chr7 73007943 Exon,non-coding 4 151513 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;0.72 FUNCTIONAL_SNP rs1178947 chr7 72850178 Exon,non-coding 4 6252 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.941;0.514 FUNCTIONAL_SNP rs13226650 chr7 73017005 Intron 4 160575 CEU:1.0;0.894, CHB:1.0;0.877, JPT:1.0;0.72 FUNCTIONAL_SNP rs34594435 chr7 72977249 Intergenic 4 120819 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;0.811 FUNCTIONAL_SNP rs7811265 chr7 72934510 Intron 5b 78080 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs11983997 chr7 72939244 Intergenic 5b 82814 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.793 FUNCTIONAL_SNP rs1178977 chr7 72857049 Intron 6 619 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11974409 chr7 72989390 Intron 7 132960 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811 FUNCTIONAL_SNP rs6976930 chr7 72885810 Intron 7 29380 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.688 FUNCTIONAL_SNP rs17145713 chr7 72904810 Intron 7 48380 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs714052 chr7 72864869 Intron 6 ASSOCIATION 20657596 Hypertriglyceridemia 5.52287874528 BAZ1B ASSOCIATION 19060906 Triglycerides 14.5228787453 BAZ1B FUNCTIONAL_SNP rs13246490 chr7 72992350 Exon,non-coding 4 127481 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.72 FUNCTIONAL_SNP rs2240466 chr7 72856269 Exon,non-coding 5a 8600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13233571 chr7 72971231 Intron 4 106362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811, YRI:1.0;1.0 FUNCTIONAL_SNP rs13232120 chr7 72983310 Intergenic 5a 118441 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811 FUNCTIONAL_SNP rs17145738 chr7 72982874 Intergenic 5b 118005 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811 FUNCTIONAL_SNP rs13231516 chr7 72863249 Intron 5b 1620 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17145750 chr7 73026378 Intron 6 161509 CEU:1.0;0.847, CHB:1.0;0.779, JPT:0.879;0.627 FUNCTIONAL_SNP rs12056034 chr7 72878645 Intron 6 13776 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13244268 chr7 72911843 Intron 6 46974 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2074755 chr7 72877166 Intron 7 12297 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17145713 chr7 72904810 Intron 7 ASSOCIATION 20802025 Plasma levels of Protein C 7.52287874528 BAZ1B FUNCTIONAL_SNP rs1051921 chr7 73007943 Exon,non-coding 4 103133 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;0.72 FUNCTIONAL_SNP rs1178947 chr7 72850178 Exon,non-coding 4 54632 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.941;0.514 FUNCTIONAL_SNP rs1178979 chr7 72856430 Exon,non-coding 5b 48380 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13226650 chr7 73017005 Intron 4 112195 CEU:1.0;0.894, CHB:1.0;0.877, JPT:1.0;0.72 FUNCTIONAL_SNP rs34594435 chr7 72977249 Intergenic 4 72439 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;0.811 FUNCTIONAL_SNP rs7811265 chr7 72934510 Intron 5b 29700 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs11983997 chr7 72939244 Intergenic 5b 34434 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.793 FUNCTIONAL_SNP rs1178977 chr7 72857049 Intron 6 47761 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11974409 chr7 72989390 Intron 7 84580 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811 FUNCTIONAL_SNP rs6976930 chr7 72885810 Intron 7 19000 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.688 LEAD_SNP rs13233571 chr7 72971231 Intron 4 ASSOCIATION 21300955 C-reactive protein 8.39794000867 BCL7B FUNCTIONAL_SNP rs13246490 chr7 72992350 Exon,non-coding 4 21119 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs2240466 chr7 72856269 Exon,non-coding 5a 114962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811, YRI:1.0;1.0 FUNCTIONAL_SNP rs13232120 chr7 72983310 Intergenic 5a 12079 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17145738 chr7 72982874 Intergenic 5b 11643 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13231516 chr7 72863249 Intron 5b 107982 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.795, YRI:1.0;1.0 FUNCTIONAL_SNP rs17145750 chr7 73026378 Intron 6 55147 CEU:1.0;0.847, CHB:1.0;0.779, JPT:0.885;0.784 FUNCTIONAL_SNP rs714052 chr7 72864869 Intron 6 106362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811, YRI:1.0;1.0 FUNCTIONAL_SNP rs12056034 chr7 72878645 Intron 6 92586 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.778, YRI:1.0;1.0 FUNCTIONAL_SNP rs13244268 chr7 72911843 Intron 6 59388 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.811, YRI:1.0;1.0 FUNCTIONAL_SNP rs2074755 chr7 72877166 Intron 7 94065 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811, YRI:1.0;1.0 LEAD_SNP rs17145738 chr7 72982874 Intergenic 5b ASSOCIATION 18193044 Triglycerides 21.15490196 TBL2 ASSOCIATION 18193043 Triglycerides 11.6989700043 TBL2 FUNCTIONAL_SNP rs13246490 chr7 72992350 Exon,non-coding 4 9476 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:1.0;1.0 FUNCTIONAL_SNP rs13232120 chr7 72983310 Intergenic 5a 436 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3812316 chr7 73020337 Coding 5b ASSOCIATION 18193046 Triglycerides 10.0 MLXIPL LEAD_SNP rs1167796 chr7 75173180 Intron 6 ASSOCIATION 19838193 Systemic lupus erythematosus 7.69897000434 HIP1 LEAD_SNP rs237238 chr7 75211414 Coding 6 ASSOCIATION 21529783 Alcoholism (12-month weekly alcohol consumption) 5.15490195999 HIP1 FUNCTIONAL_SNP rs794349 chr7 75205122 Intron 5b 6292 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs237240 chr7 75210659 Intron 6 755 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;0.891 FUNCTIONAL_SNP rs189359 chr7 75217327 Intron 7 5913 CEU:1.0;1.0, JPT:1.0;0.601 LEAD_SNP rs7789940 chr7 75951230 Intergenic 7 ASSOCIATION 21654844 Multiple sclerosis 5.22184874962 LOC100289506 FUNCTIONAL_SNP rs11765693 chr7 75985373 Intron 4 34143 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;1.0 FUNCTIONAL_SNP rs7779014 chr7 75975586 Intron 4 24356 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs12532935 chr7 75939698 Intergenic 4 11532 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17149161 chr7 75978229 Intron 4 26999 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs758944 chr7 75953297 Intergenic 6 2067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs758944 chr7 75953297 Intergenic 6 ASSOCIATION 21654844 Multiple sclerosis 5.09691001301 LOC100289506 FUNCTIONAL_SNP rs11765693 chr7 75985373 Intron 4 32076 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7779014 chr7 75975586 Intron 4 22289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs12532935 chr7 75939698 Intergenic 4 13599 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17149161 chr7 75978229 Intron 4 24932 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7789940 chr7 75951230 Intergenic 7 2067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7779014 chr7 75975586 Intron 4 ASSOCIATION 21654844 Multiple sclerosis 5.09691001301 YWHAG FUNCTIONAL_SNP rs11765693 chr7 75985373 Intron 4 9787 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.957 FUNCTIONAL_SNP rs12532935 chr7 75939698 Intergenic 4 35888 CEU:1.0;0.888, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17149161 chr7 75978229 Intron 4 2643 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs758944 chr7 75953297 Intergenic 6 22289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs7789940 chr7 75951230 Intergenic 7 24356 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 LEAD_SNP rs17149161 chr7 75978229 Intron 4 ASSOCIATION 21654844 Multiple sclerosis 5.22184874962 YWHAG FUNCTIONAL_SNP rs11765693 chr7 75985373 Intron 4 7144 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7779014 chr7 75975586 Intron 4 2643 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs12532935 chr7 75939698 Intergenic 4 38531 CEU:1.0;0.888, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs758944 chr7 75953297 Intergenic 6 24932 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7789940 chr7 75951230 Intergenic 7 26999 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6955651 chr7 76639871 Intron 2b ASSOCIATION 20935630 Body mass index 5.69897000434 PMS2L11 FUNCTIONAL_SNP rs2430307 chr7 76609944 Intron 5b 29927 CEU:1.0;1.0 FUNCTIONAL_SNP rs2539652 chr7 76623691 Intron 5b 16180 CEU:1.0;0.843 FUNCTIONAL_SNP rs17149254 chr7 76634463 Intron 5b 5408 CEU:1.0;1.0 FUNCTIONAL_SNP rs4729098 chr7 76637070 Intron 5b 2801 CEU:1.0;1.0 FUNCTIONAL_SNP rs2245368 chr7 76608143 Intron 5b 31728 CEU:1.0;1.0 FUNCTIONAL_SNP rs7804646 chr7 76567990 Intron 7 71881 CEU:1.0;0.943 LEAD_SNP rs6465825 chr7 77416439 Intergenic 5b ASSOCIATION 20383146 Chronic kidney disease 8.69897000434 RSBN1L - TMEM60 FUNCTIONAL_SNP rs848483 chr7 77547198 Intron 5b 130759 CEU:0.959;0.92, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs6970595 chr7 77426482 Intron 5b 10043 CEU:1.0;0.96, CHB:0.902;0.814, JPT:1.0;0.92, YRI:0.955;0.655 FUNCTIONAL_SNP rs2903929 chr7 77401648 Intron 5b 14791 CEU:1.0;0.96, JPT:1.0;0.64, YRI:1.0;0.505 FUNCTIONAL_SNP rs11972096 chr7 77433484 Intron 6 17045 CEU:1.0;0.96, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7795371 chr7 77362504 Intron 6 53935 CEU:1.0;0.886, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6973656 chr7 77422583 Intergenic 6 6144 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs10263369 chr7 77406404 Intron 6 10035 CEU:1.0;0.96, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10270542 chr7 77523769 Intron 6 107330 CEU:1.0;0.851, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs6965245 chr7 77329743 Intron 6 86696 CEU:1.0;0.922, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1544459 chr7 77417584 Intergenic 7 1145 CEU:1.0;0.817, JPT:1.0;0.5 LEAD_SNP rs2691543 chr7 77964788 Intron 7 ASSOCIATION 20966902 Height 5.30102999566 MAGI2 LEAD_SNP rs11525066 chr7 78175977 Intron 7 ASSOCIATION 19668339 Hippocampal atrophy 5.52287874528 MAGI2 LEAD_SNP rs2199936 chr7 79651453 Intergenic 6 ASSOCIATION 20884846 Serum urate 75.0 - ASSOCIATION 20884846 Serum urate 22.5228787453 - LEAD_SNP rs10499859 chr7 80258810 Intron 7 ASSOCIATION 19454037 Left ventricular mass 5.52287874528 CD36 FUNCTIONAL_SNP rs1049654 chr7 80275455 Exon,non-coding 3a 16645 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.514 FUNCTIONAL_SNP rs1194182 chr7 80231504 Exon,non-coding 5a 27306 CEU:1.0;0.926, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.852;0.534 FUNCTIONAL_SNP rs3211821 chr7 80278563 Intron 4 19753 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.823;0.55 FUNCTIONAL_SNP rs1761661 chr7 80238041 Intron 4 20769 CEU:1.0;0.928, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs3212160 chr7 80273308 Intron 5a 14498 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs1358337 chr7 80288385 Intron 5a 29575 CEU:1.0;0.924, CHB:1.0;0.749, JPT:1.0;0.684 FUNCTIONAL_SNP rs3211842 chr7 80282636 Intron 5a 23826 CEU:1.0;0.894, CHB:1.0;0.605 FUNCTIONAL_SNP rs1413661 chr7 80243003 Intron 5a 15807 CEU:1.0;0.964, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13438282 chr7 80262224 Intron 5a 3414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.831;0.653 FUNCTIONAL_SNP rs1722505 chr7 80240689 Intron 5b 18121 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2366855 chr7 80253455 Intron 5b 5355 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs819437 chr7 80223996 Intron 5b 34814 CEU:0.959;0.883, CHB:0.95;0.902, JPT:1.0;1.0 FUNCTIONAL_SNP rs1722502 chr7 80241874 Intron 6 16936 CEU:1.0;0.962, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs1761665 chr7 80242079 Intron 6 16731 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1054516 chr7 80284942 Intron 6 26132 CEU:1.0;1.0, CHB:1.0;0.6, YRI:0.813;0.588 FUNCTIONAL_SNP rs1527479 chr7 80272568 Intron 6 13758 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.937;0.78 FUNCTIONAL_SNP rs1953298 chr7 80265451 Intron 6 6641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs3211870 chr7 80287209 Intron 6 28399 CEU:1.0;0.924, CHB:1.0;0.515 FUNCTIONAL_SNP rs12706912 chr7 80252295 Intron 6 6515 CEU:1.0;0.924, CHB:1.0;0.681 FUNCTIONAL_SNP rs819436 chr7 80224314 Intron 6 34496 CEU:1.0;0.889, CHB:0.95;0.902, JPT:1.0;1.0 FUNCTIONAL_SNP rs4731643 chr7 80248029 Intron 6 10781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4545029 chr7 80252518 Intron 7 6292 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1953299 chr7 80265625 Intron 7 6815 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.838 FUNCTIONAL_SNP rs10480808 chr7 80250122 Intron 7 8688 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3211885 chr7 80289402 Intron 7 30592 CEU:1.0;0.923, CHB:1.0;0.507 FUNCTIONAL_SNP rs1194178 chr7 80234607 Intron 7 24203 CEU:1.0;0.893, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs1537477 chr7 80251202 Intron 7 7608 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3211849 chr7 80283323 Intron 7 24513 CEU:1.0;0.894, CHB:1.0;0.91, JPT:1.0;0.945 FUNCTIONAL_SNP rs13236689 chr7 80236014 Intron 7 22796 CEU:1.0;0.821, CHB:1.0;0.65 FUNCTIONAL_SNP rs4731642 chr7 80248001 Intron 7 10809 CEU:1.0;0.822 FUNCTIONAL_SNP rs7807607 chr7 80226885 Intron 7 31925 CEU:1.0;0.894, CHB:0.951;0.905, JPT:1.0;1.0 FUNCTIONAL_SNP rs1761662 chr7 80238463 Intron 7 20347 CEU:1.0;0.924, CHB:1.0;0.95, JPT:1.0;1.0 LEAD_SNP rs4236644 chr7 80599357 Intergenic 7 ASSOCIATION 19414484 Serum bilirubin levels 5.69897000434 SEMA3C - HGF LEAD_SNP rs10954668 chr7 81847651 Intron 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 5.15490195999 CACNA2D1 FUNCTIONAL_SNP rs3819437 chr7 81825697 Intron 7 21954 CEU:0.957;0.842, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11514983 chr7 81853237 Intron 7 5586 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.904 LEAD_SNP rs2371208 chr7 82337859 Intergenic 6 ASSOCIATION 17903295 Aging traits 5.52287874528 CACNA2D1 - PCLO FUNCTIONAL_SNP rs4732474 chr7 82313975 Intergenic 7 23884 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.801 LEAD_SNP rs2715148 chr7 82450035 Exon,non-coding 5b ASSOCIATION 21621269 Major depressive disorder 6.0 PCLO FUNCTIONAL_SNP rs2715157 chr7 82468374 Intron 5a 18339 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846, YRI:1.0;1.0 FUNCTIONAL_SNP rs2715147 chr7 82448405 Intron 7 1630 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2715154 chr7 82460866 Intron 7 10831 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs2189246 chr7 82444372 Intron 7 5663 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 LEAD_SNP rs11773103 chr7 86821980 Intron 6 ASSOCIATION 20351715 Bipolar disorder and major depressive disorder (combined) 6.0 DMTF1 FUNCTIONAL_SNP rs17161329 chr7 86770106 Intergenic 5a 51874 CEU:1.0;1.0 FUNCTIONAL_SNP rs11971131 chr7 86823619 Intron 5a 1639 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11760687 chr7 86962741 Intron 6 140761 CEU:1.0;1.0 FUNCTIONAL_SNP rs11771466 chr7 86962803 Intron 6 140823 CEU:1.0;1.0 FUNCTIONAL_SNP rs11762311 chr7 86942825 Intergenic 7 120845 CEU:1.0;1.0, CHB:1.0;0.659, YRI:1.0;1.0 FUNCTIONAL_SNP rs11771569 chr7 86838068 Intron 7 16088 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17149389 chr7 86969438 Intron 7 147458 CEU:1.0;1.0 FUNCTIONAL_SNP rs17149393 chr7 86971554 Intron 7 149574 CEU:1.0;1.0 FUNCTIONAL_SNP rs11769063 chr7 86918603 Intergenic 7 96623 CEU:1.0;1.0, CHB:1.0;0.659 LEAD_SNP rs1406503 chr7 88560878 Intron 5a ASSOCIATION 20966902 Body mass index 5.04575749056 ZNF804B LEAD_SNP rs6959888 chr7 88596385 Intron 7 ASSOCIATION 21079607 Anorexia nervosa 5.69897000434 ZNF804B LEAD_SNP rs42041 chr7 92246744 Intron 7 ASSOCIATION 18794853 Rheumatoid arthritis 5.39794000867 CDK6 LEAD_SNP rs2040494 chr7 92256905 Intron 7 ASSOCIATION 18391950 Height 6.39794000867 CDK6 FUNCTIONAL_SNP rs3731343 chr7 92273536 Intron 7 16631 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.868, YRI:1.0;0.931 LEAD_SNP rs2282978 chr7 92264410 Intron 2b ASSOCIATION 19343178 Height 8.0 CDK6 ASSOCIATION 18391951 Height 8.0 CDK6 ASSOCIATION 18391952 Height 22.096910013 CDK6 FUNCTIONAL_SNP rs10269774 chr7 92253972 Intron 5b 10438 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;0.827 LEAD_SNP rs445 chr7 92408370 Intron 4 ASSOCIATION 21738478 White blood cell types 9.15490195999 CDK6 ASSOCIATION 21738479 White blood cell count 6.39794000867 CDK6 ASSOCIATION 20139978 Hematological and biochemical traits 7.69897000434 CDK6 LEAD_SNP rs441051 chr7 94054000 Intron 5b ASSOCIATION 17903307 Mean forced vital capacity from 2 exams 5.69897000434 COL1A2 FUNCTIONAL_SNP rs2621214 chr7 94053005 Intron 6 995 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs854555 chr7 94930391 Intron 6 ASSOCIATION 18615156 Response to TNF antagonist treatment 5.69897000434 PON1 LEAD_SNP rs4729260 chr7 96117918 Intron 6 ASSOCIATION 19801982 Bone mineral density (spine) 9.69897000434 FLJ42280 FUNCTIONAL_SNP rs10085588 chr7 96137674 Intergenic 5a 19756 CEU:1.0;0.856, CHB:1.0;0.756, JPT:1.0;0.64, YRI:1.0;1.0 FUNCTIONAL_SNP rs4370463 chr7 96134401 Intergenic 6 16483 CEU:1.0;0.938, CHB:1.0;0.759, JPT:1.0;0.757, YRI:1.0;1.0 FUNCTIONAL_SNP rs6465508 chr7 96127355 Intron 6 9437 CEU:1.0;0.895, CHB:1.0;0.758, JPT:1.0;0.796, YRI:1.0;1.0 FUNCTIONAL_SNP rs4342521 chr7 96136005 Intergenic 6 18087 CEU:1.0;0.897, CHB:1.0;0.758, JPT:1.0;0.778, YRI:1.0;1.0 FUNCTIONAL_SNP rs7781370 chr7 96133531 Intergenic 6 15613 CEU:1.0;0.903, CHB:1.0;0.758, JPT:1.0;0.796, YRI:1.0;1.0 FUNCTIONAL_SNP rs6971293 chr7 96148577 Intergenic 7 30659 CEU:1.0;0.907, CHB:1.0;0.759, JPT:1.0;0.7 FUNCTIONAL_SNP rs10808100 chr7 96130553 Intron 7 12635 CEU:1.0;0.903, CHB:1.0;0.758, JPT:1.0;0.796, YRI:1.0;1.0 FUNCTIONAL_SNP rs4727338 chr7 96120675 Intron 7 2757 CEU:1.0;0.907, CHB:1.0;0.759, JPT:1.0;0.797, YRI:1.0;1.0 FUNCTIONAL_SNP rs4448201 chr7 96154912 Intergenic 7 36994 CEU:1.0;0.907, CHB:1.0;0.759, JPT:1.0;0.7 FUNCTIONAL_SNP rs4427101 chr7 96141701 Intergenic 7 23783 CEU:1.0;0.907, CHB:1.0;0.759, JPT:1.0;0.797, YRI:1.0;1.0 FUNCTIONAL_SNP rs6465511 chr7 96134115 Intergenic 7 16197 CEU:1.0;0.895, CHB:1.0;0.758, JPT:1.0;0.796, YRI:1.0;0.875 FUNCTIONAL_SNP rs7787512 chr7 96131103 Intron 7 13185 CEU:1.0;0.901 LEAD_SNP rs7781370 chr7 96133531 Intergenic 6 ASSOCIATION 19801982 Bone mineral density (hip) 11.3010299957 FLJ42280 - SHFM1 FUNCTIONAL_SNP rs10085588 chr7 96137674 Intergenic 5a 4143 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.845, YRI:1.0;1.0 FUNCTIONAL_SNP rs4370463 chr7 96134401 Intergenic 6 870 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4729260 chr7 96117918 Intron 6 15613 CEU:1.0;0.903, CHB:1.0;0.758, JPT:1.0;0.796, YRI:1.0;1.0 FUNCTIONAL_SNP rs6465508 chr7 96127355 Intron 6 6176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4342521 chr7 96136005 Intergenic 6 2474 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6971293 chr7 96148577 Intergenic 7 15046 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs10808100 chr7 96130553 Intron 7 2978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4727338 chr7 96120675 Intron 7 12856 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4448201 chr7 96154912 Intergenic 7 21381 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs4427101 chr7 96141701 Intergenic 7 8170 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6465511 chr7 96134115 Intergenic 7 584 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs7787512 chr7 96131103 Intron 7 2428 CEU:1.0;1.0, JPT:1.0;0.655 LEAD_SNP rs12669076 chr7 96415055 Intergenic 6 ASSOCIATION 20694011 Immunoglobulin A 5.69897000434 SHFM1 - DLX6AS LEAD_SNP rs17598306 chr7 96581811 Intergenic 6 ASSOCIATION 20923822 Radiation response 5.04575749056 SHFM1 - DLX6AS FUNCTIONAL_SNP rs2016644 chr7 96596049 Exon,non-coding 6 14238 CEU:1.0;1.0 FUNCTIONAL_SNP rs17598132 chr7 96579339 Intergenic 4 2472 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17657291 chr7 96603943 Intron 6 22132 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17656761 chr7 96581553 Intergenic 6 258 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2894085 chr7 96584407 Intergenic 7 2596 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs722470 chr7 96581466 Intergenic 7 345 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2189774 chr7 96605287 Intron 7 23476 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17598579 chr7 96590472 Intergenic 7 8661 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17657370 chr7 96606492 Intron 7 24681 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13438327 chr7 97620691 Intergenic 5b ASSOCIATION 21658281 Sudden cardiac arrest 5.69897000434 OCM2 FUNCTIONAL_SNP rs17169235 chr7 97614800 Intron 6 5891 CEU:1.0;1.0 FUNCTIONAL_SNP rs13235265 chr7 97623339 Intergenic 7 2648 CEU:1.0;1.0, YRI:1.0;0.696 FUNCTIONAL_SNP rs10231883 chr7 97616154 Intron 7 4537 CEU:1.0;1.0 FUNCTIONAL_SNP rs10248044 chr7 97618143 Intron 7 2548 CEU:1.0;1.0, YRI:1.0;0.719 FUNCTIONAL_SNP rs13246032 chr7 97625644 Intergenic 7 4953 CEU:1.0;1.0, YRI:1.0;0.587 LEAD_SNP rs6465657 chr7 97816327 Intron 4 ASSOCIATION 19767753 Prostate cancer 7.69897000434 LMTK2 ASSOCIATION 18264097 Prostate cancer 9.0 LMTK2 FUNCTIONAL_SNP rs11765552 chr7 97822115 Coding 6 5788 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3801294 chr7 97822210 Coding 6 5883 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6965016 chr7 97807882 Intron 2b 8445 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2132276 chr7 97826340 Intron 2b 10013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1013886 chr7 97709861 Intergenic 3a 106466 CEU:1.0;0.821 FUNCTIONAL_SNP rs6967926 chr7 97715088 Intergenic 4 101239 CEU:1.0;1.0, CHB:1.0;0.632, JPT:1.0;1.0 FUNCTIONAL_SNP rs17435847 chr7 97792820 Intron 5b 23507 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6465658 chr7 97816638 Intron 5b 311 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11763970 chr7 97817321 Intron 6 994 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10953238 chr7 97676259 Intergenic 6 140068 CEU:0.959;0.85, CHB:1.0;0.699, JPT:1.0;0.823 FUNCTIONAL_SNP rs7804318 chr7 97796635 Intron 6 19692 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11768309 chr7 97773812 Intron 6 42515 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs940432 chr7 97716483 Intergenic 7 99844 CEU:1.0;0.854 FUNCTIONAL_SNP rs705308 chr7 97695363 Intergenic 7 120964 CEU:1.0;0.924, CHB:1.0;0.779, JPT:1.0;1.0 FUNCTIONAL_SNP rs11764933 chr7 97825188 Intron 7 8861 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6977321 chr7 97774859 Intron 7 41468 CEU:1.0;1.0, CHB:1.0;0.756, JPT:1.0;1.0 FUNCTIONAL_SNP rs2394817 chr7 97690438 Intergenic 7 125889 CEU:0.961;0.923, CHB:1.0;0.779, JPT:1.0;1.0 FUNCTIONAL_SNP rs6465654 chr7 97786282 Intron 7 30045 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17435590 chr7 97784061 Intron 7 32266 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7808528 chr7 97721425 Intergenic 7 94902 CEU:1.0;1.0, CHB:1.0;0.699, JPT:1.0;1.0 FUNCTIONAL_SNP rs6951277 chr7 97711783 Intergenic 7 104544 CEU:1.0;0.821 FUNCTIONAL_SNP rs1013887 chr7 97709345 Intergenic 7 106982 CEU:1.0;0.821 LEAD_SNP rs7809799 chr7 98760504 Intergenic 5b ASSOCIATION 20228798 Ulcerative colitis 10.0457574906 SMURF1 - KPNA7 FUNCTIONAL_SNP rs17161687 chr7 98941909 Intron 5a 181405 CEU:1.0;0.824 FUNCTIONAL_SNP rs6961579 chr7 98880997 Intron 5b 120493 CEU:1.0;0.825 FUNCTIONAL_SNP rs4454228 chr7 98753158 Intergenic 5b 7346 CEU:1.0;1.0 FUNCTIONAL_SNP rs2395048 chr7 98765552 Intergenic 6 5048 CEU:1.0;1.0 FUNCTIONAL_SNP rs7788750 chr7 98739231 Intron 6 21273 CEU:1.0;1.0 FUNCTIONAL_SNP rs740160 chr7 98957880 Intron 7 197376 CEU:1.0;0.824 FUNCTIONAL_SNP rs6960805 chr7 98880642 Intron 7 120138 CEU:1.0;0.824 FUNCTIONAL_SNP rs11971111 chr7 98881654 Intron 7 121150 CEU:1.0;1.0 FUNCTIONAL_SNP rs11977673 chr7 98893935 Intron 7 133431 CEU:1.0;0.824 FUNCTIONAL_SNP rs6975245 chr7 98755272 Intergenic 7 5232 CEU:1.0;1.0 FUNCTIONAL_SNP rs2395022 chr7 98750379 Intergenic 7 10125 CEU:1.0;1.0 FUNCTIONAL_SNP rs11978582 chr7 98915958 Intergenic 7 155454 CEU:1.0;0.824 FUNCTIONAL_SNP rs11978345 chr7 98930036 Intron 7 169532 CEU:1.0;0.824 LEAD_SNP rs740160 chr7 98957880 Intron 7 ASSOCIATION 21533175 Serum dehydroepiandrosterone sulphate levels 15.6989700043 ARPC1A FUNCTIONAL_SNP rs17161687 chr7 98941909 Intron 5a 15971 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs7809799 chr7 98760504 Intergenic 5b 197376 CEU:1.0;0.824 FUNCTIONAL_SNP rs11974885 chr7 98891155 Intron 5b 66725 CEU:1.0;0.866, CHB:1.0;1.0, YRI:1.0;0.574 FUNCTIONAL_SNP rs2395048 chr7 98765552 Intergenic 6 192328 CEU:1.0;0.824 FUNCTIONAL_SNP rs35296070 chr7 99057341 Intron 7 99461 CEU:1.0;0.848, CHB:1.0;1.0 FUNCTIONAL_SNP rs11977673 chr7 98893935 Intron 7 63945 CEU:1.0;1.0, YRI:0.875;0.647 FUNCTIONAL_SNP rs11978582 chr7 98915958 Intergenic 7 41922 CEU:1.0;1.0, CHB:1.0;1.0, YRI:0.946;0.848 FUNCTIONAL_SNP rs34111611 chr7 99095777 Intron 7 137897 CEU:1.0;0.848, CHB:1.0;1.0 FUNCTIONAL_SNP rs11978345 chr7 98930036 Intron 7 27844 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11761528 chr7 99118801 Intron 5b ASSOCIATION 21533175 Serum dehydroepiandrosterone sulphate levels 35.5228787453 ZKSCAN5 FUNCTIONAL_SNP rs28655791 chr7 98933689 Intron 5b 185112 CEU:1.0;1.0 FUNCTIONAL_SNP rs10247946 chr7 98935333 Intron 7 183468 CEU:1.0;1.0 FUNCTIONAL_SNP rs10237212 chr7 98920319 Intergenic 7 198482 CEU:1.0;1.0 LEAD_SNP rs7792939 chr7 99207876 Intron 7 ASSOCIATION 19260139 Anthropometric traits 5.22184874962 LOC100289187 ASSOCIATION 19260139 Anthropometric traits 5.30102999566 LOC100289187 ASSOCIATION 19260139 Anthropometric traits 5.39794000867 LOC100289187 LEAD_SNP rs17277546 chr7 99489571 Exon,non-coding 6 ASSOCIATION 21533175 Serum dehydroepiandrosterone sulphate levels 10.6989700043 TRIM4 LEAD_SNP rs7786877 chr7 100214015 Intergenic 7 ASSOCIATION 19862010 Mean corpuscular volume 10.5228787453 MOSPD3 - TFR2 FUNCTIONAL_SNP rs6969584 chr7 100209747 Exon,non-coding 4 4268 CEU:1.0;0.811, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6969697 chr7 100209604 Intergenic 2a 4411 CEU:1.0;0.811, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7812123 chr7 100211556 Intron 2b 2459 CEU:1.0;0.811, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7812235 chr7 100211486 Intron 3a 2529 CEU:1.0;0.802, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11764045 chr7 100212754 Intron 6 1261 CEU:1.0;0.811, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10487157 chr7 100214487 Intergenic 6 472 CEU:1.0;0.811, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12532878 chr7 100212254 Intron 7 1761 CEU:1.0;0.811, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 LEAD_SNP rs7385804 chr7 100235970 Intron 7 ASSOCIATION 21208937 Serum iron levels 7.15490195999 TFR2 ASSOCIATION 19862010 Hematocrit 9.39794000867 TFR2 ASSOCIATION 19820697 Hematological parameters 9.30102999566 TFR2 FUNCTIONAL_SNP rs4729597 chr7 100221849 Intron 2b 14121 CEU:1.0;0.954, CHB:1.0;0.856, JPT:1.0;1.0 FUNCTIONAL_SNP rs2075672 chr7 100240296 Intron 4 4326 CEU:1.0;1.0, CHB:1.0;0.923, JPT:1.0;1.0, YRI:1.0;0.954 LEAD_SNP rs2075671 chr7 100345106 Intron 7 ASSOCIATION 19862010 Other erythrocyte phenotypes 9.0 ZAN FUNCTIONAL_SNP rs4729606 chr7 100321790 Intergenic 5b 23316 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;0.796 FUNCTIONAL_SNP rs4729607 chr7 100326744 Intergenic 6 18362 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;0.796 LEAD_SNP rs314370 chr7 100453208 Intron 5b ASSOCIATION 20639392 Resting heart rate 9.22184874962 SLC12A9 FUNCTIONAL_SNP rs17884589 chr7 100493711 Exon,non-coding 4 40503 CEU:1.0;0.868, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6706 chr7 100471044 Exon,non-coding 5b 17836 CEU:1.0;0.868, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10278546 chr7 100516003 Intergenic 5b 62795 CEU:0.931;0.812 FUNCTIONAL_SNP rs12705092 chr7 100473550 Intron 5b 20342 CEU:1.0;0.868, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12705095 chr7 100484381 Intron 5b 31173 CEU:1.0;0.862, YRI:1.0;1.0 FUNCTIONAL_SNP rs3757868 chr7 100482720 Intron 5b 29512 CEU:1.0;0.868, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12667888 chr7 100474289 Intron 5b 21081 CEU:1.0;0.868, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13306969 chr7 100525805 Intergenic 7 72597 CEU:0.931;0.812, CHB:1.0;0.659, JPT:1.0;0.659 LEAD_SNP rs7801190 chr7 100458093 Intron 5b ASSOCIATION 21347282 Coronary heart disease 7.52287874528 SLC12A9 LEAD_SNP rs12666989 chr7 100486754 Coding 4 ASSOCIATION 20639392 Resting heart rate 7.69897000434 SRRT;UFSP1 FUNCTIONAL_SNP rs17884589 chr7 100493711 Exon,non-coding 4 6957 CEU:1.0;0.922, YRI:1.0;1.0 FUNCTIONAL_SNP rs6706 chr7 100471044 Exon,non-coding 5b 15710 CEU:1.0;0.922, YRI:1.0;1.0 FUNCTIONAL_SNP rs12705092 chr7 100473550 Intron 5b 13204 CEU:1.0;0.922, YRI:1.0;1.0 FUNCTIONAL_SNP rs3757868 chr7 100482720 Intron 5b 4034 CEU:1.0;0.922, YRI:1.0;1.0 FUNCTIONAL_SNP rs12705095 chr7 100484381 Intron 5b 2373 CEU:1.0;0.926, YRI:1.0;1.0 FUNCTIONAL_SNP rs12667888 chr7 100474289 Intron 5b 12465 CEU:1.0;0.922, YRI:1.0;1.0 LEAD_SNP rs7636 chr7 100490077 Coding 5b ASSOCIATION 21490949 Type 2 diabetes 5.30102999566 ACHE LEAD_SNP rs7341475 chr7 103404815 Intron 7 ASSOCIATION 18282107 Schizophrenia 6.04575749056 RELN FUNCTIONAL_SNP rs17290575 chr7 103401621 Intron 6 3194 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs6954479 chr7 103403948 Intron 7 867 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3914132 chr7 103527369 Intron 6 ASSOCIATION 19230858 Otosclerosis 7.69897000434 RELN FUNCTIONAL_SNP rs11761756 chr7 103531783 Intron 5b 4414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3914133 chr7 103531983 Intron 6 4614 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6465944 chr7 103533400 Intron 6 6031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs10254112 chr7 103521721 Intron 6 5648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.945 LEAD_SNP rs4298437 chr7 103625877 Intron 5b ASSOCIATION 20452100 Alzheimer's disease 5.69897000434 RELN FUNCTIONAL_SNP rs4489256 chr7 103627369 Intron 5b 1492 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.836 LEAD_SNP rs17157903 chr7 103628036 Intron 4 ASSOCIATION 19010793 Multiple sclerosis (age of onset) 5.52287874528 RELN LEAD_SNP rs10953454 chr7 104503813 Intron 7 ASSOCIATION 21552555 Obesity 6.15490195999 LHFPL3 FUNCTIONAL_SNP rs35146170 chr7 104472431 Intron 5b 31382 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.65 FUNCTIONAL_SNP rs17777379 chr7 104491000 Intron 5b 12813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.953;0.738 FUNCTIONAL_SNP rs12705281 chr7 104475567 Intron 6 28246 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10953455 chr7 104503978 Intron 6 165 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10250365 chr7 104501334 Intron 6 2479 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1468813 chr7 104494163 Intron 7 9650 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.925 FUNCTIONAL_SNP rs17777439 chr7 104502149 Intron 7 1664 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12535201 chr7 104501521 Intron 7 2292 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.688 FUNCTIONAL_SNP rs10216243 chr7 104513624 Intron 7 9811 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.951, YRI:1.0;0.603 FUNCTIONAL_SNP rs10247246 chr7 104501165 Intron 7 2648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.702 FUNCTIONAL_SNP rs10259925 chr7 104491405 Intron 7 12408 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:0.95;0.65 FUNCTIONAL_SNP rs7781864 chr7 104511576 Intron 7 7763 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10270308 chr7 105671267 Coding 7 ASSOCIATION 20833655 Warfarin maintenance dose 5.22184874962 CDHR3 FUNCTIONAL_SNP rs2072161 chr7 105662461 Intron 5b 8806 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.822 LEAD_SNP rs342293 chr7 106372219 Intergenic 5b ASSOCIATION 19820697 Mean platelet volume 32.6989700043 FLJ36031 - PIK3CG ASSOCIATION 19221038 Mean platelet volume 24.0 FLJ36031 - PIK3CG FUNCTIONAL_SNP rs342275 chr7 106359216 Intergenic 2b 13003 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.897 FUNCTIONAL_SNP rs342292 chr7 106370644 Intergenic 4 1575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;0.834 FUNCTIONAL_SNP rs342251 chr7 106344809 Intergenic 4 27410 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs342258 chr7 106350182 Intergenic 4 22037 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs342296 chr7 106372903 Intergenic 5a 684 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.915 FUNCTIONAL_SNP rs342284 chr7 106362210 Intergenic 5b 10009 CEU:0.913;0.8 FUNCTIONAL_SNP rs342294 chr7 106372622 Intergenic 5b 403 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;0.958 FUNCTIONAL_SNP rs342295 chr7 106372760 Intergenic 5b 541 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.904 FUNCTIONAL_SNP rs342212 chr7 106323914 Intergenic 5b 48305 CEU:0.915;0.803, CHB:1.0;0.911, JPT:1.0;0.897 FUNCTIONAL_SNP rs342213 chr7 106324612 Intergenic 5b 47607 CEU:0.918;0.842, CHB:1.0;0.911, JPT:1.0;0.897 FUNCTIONAL_SNP rs342286 chr7 106364599 Intergenic 6 7620 CEU:0.921;0.848, CHB:1.0;1.0, JPT:1.0;0.897 FUNCTIONAL_SNP rs342299 chr7 106373718 Intergenic 6 1499 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs342210 chr7 106322020 Intergenic 6 50199 CEU:1.0;0.921, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs342239 chr7 106336902 Intergenic 6 35317 CEU:1.0;0.888, CHB:1.0;0.911, JPT:1.0;0.897 FUNCTIONAL_SNP rs342244 chr7 106340825 Intergenic 6 31394 CEU:0.919;0.845, CHB:1.0;0.911, JPT:1.0;0.897 FUNCTIONAL_SNP rs342254 chr7 106348256 Intergenic 6 23963 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.897 FUNCTIONAL_SNP rs342257 chr7 106349853 Intergenic 6 22366 CEU:0.917;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs342281 chr7 106361843 Intergenic 7 10376 CEU:0.921;0.848, CHB:1.0;1.0, JPT:1.0;0.897 FUNCTIONAL_SNP rs342298 chr7 106373646 Intergenic 7 1427 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs342207 chr7 106321405 Intergenic 7 50814 CEU:0.919;0.812, CHB:1.0;0.91, JPT:1.0;0.877 FUNCTIONAL_SNP rs342214 chr7 106324743 Intergenic 7 47476 CEU:0.921;0.848, CHB:1.0;0.911, JPT:1.0;0.897 FUNCTIONAL_SNP rs342236 chr7 106335638 Intergenic 7 36581 CEU:0.919;0.812, CHB:1.0;0.911, JPT:1.0;0.896 FUNCTIONAL_SNP rs342240 chr7 106337250 Intergenic 7 34969 CEU:0.959;0.849, CHB:1.0;0.833, JPT:1.0;1.0 FUNCTIONAL_SNP rs342242 chr7 106338989 Intergenic 7 33230 CEU:1.0;0.925, CHB:1.0;0.911, JPT:1.0;1.0 LEAD_SNP rs17153527 chr7 106495809 Intergenic 6 ASSOCIATION 19448619 Menopause (age at onset) 6.39794000867 FLJ36031 - PIK3CG LEAD_SNP rs13224682 chr7 106763218 Intron 5b ASSOCIATION 20195266 Response to antipsychotic treatment 7.22184874962 PRKAR2B LEAD_SNP rs3815148 chr7 106938420 Intron 6 ASSOCIATION 20112360 Osteoarthritis 7.09691001301 COG5 FUNCTIONAL_SNP rs17349904 chr7 106897237 Coding 5a 41183 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0 FUNCTIONAL_SNP rs7794598 chr7 106826381 Coding 5b 112039 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs6949961 chr7 106850755 Exon,non-coding 6 87665 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7981 chr7 106843133 Exon,non-coding 6 95287 CEU:1.0;0.938 FUNCTIONAL_SNP rs257377 chr7 106801088 Exon,non-coding 5b 137332 CEU:1.0;0.838 FUNCTIONAL_SNP rs257378 chr7 106801395 Exon,non-coding 5b 137025 CEU:1.0;0.838 FUNCTIONAL_SNP rs6967745 chr7 106850548 Exon,non-coding 6 87872 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12532849 chr7 106959226 Intron 2b 20806 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12705405 chr7 106792517 Intron 4 145903 CEU:1.0;0.81 FUNCTIONAL_SNP rs257387 chr7 106808480 Intergenic 4 129940 CEU:1.0;0.838 FUNCTIONAL_SNP rs2249043 chr7 106960515 Intron 4 22095 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12537011 chr7 107027833 Intron 4 89413 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3779500 chr7 106792704 Intron 4 145716 CEU:1.0;0.838 FUNCTIONAL_SNP rs12533767 chr7 106860245 Intron 5a 78175 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17428126 chr7 106897037 Intron 5a 41383 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7810216 chr7 107000353 Intron 5a 61933 CEU:1.0;1.0 FUNCTIONAL_SNP rs6946036 chr7 106853659 Intron 5a 84761 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10464620 chr7 107135653 Intron 5a 197233 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3801965 chr7 106825628 Intron 5a 112792 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12538769 chr7 106984288 Intron 5a 45868 CEU:1.0;1.0 FUNCTIONAL_SNP rs2107318 chr7 106845969 Intron 5a 92451 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2894459 chr7 106960166 Intron 5a 21746 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs8180747 chr7 107106308 Intron 5b 167888 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1018947 chr7 106851939 Intron 5b 86481 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6946931 chr7 106788621 Intron 5b 149799 CEU:1.0;0.838 FUNCTIONAL_SNP rs3757713 chr7 107042750 Intron 5b 104330 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7794965 chr7 106826439 Intron 5b 111981 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4730223 chr7 106814234 Intron 5b 124186 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12537785 chr7 107050221 Intron 5b 111801 CEU:1.0;1.0 FUNCTIONAL_SNP rs997311 chr7 106953033 Intron 5b 14613 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2023892 chr7 106847686 Intron 5b 90734 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12535258 chr7 106971050 Intron 5b 32630 CEU:1.0;1.0 FUNCTIONAL_SNP rs975935 chr7 106789152 Intron 6 149268 CEU:1.0;0.838 FUNCTIONAL_SNP rs6466160 chr7 106793175 Intron 6 145245 CEU:1.0;0.838 FUNCTIONAL_SNP rs34084719 chr7 107095227 Intron 6 156807 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7807648 chr7 106965091 Intron 6 26671 CEU:1.0;1.0 FUNCTIONAL_SNP rs7777976 chr7 106888594 Intron 6 49826 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6963917 chr7 106953427 Intron 6 15007 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17403088 chr7 107111373 Intron 6 172953 CEU:1.0;0.809, CHB:1.0;0.933, JPT:1.0;0.549 FUNCTIONAL_SNP rs12532953 chr7 106865920 Intron 6 72500 CEU:1.0;1.0, CHB:1.0;0.929, JPT:1.0;1.0 FUNCTIONAL_SNP rs2395880 chr7 107074264 Intron 6 135844 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1548524 chr7 106944563 Intron 6 6143 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17429118 chr7 106964052 Intron 6 25632 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3729876 chr7 106786952 Intron 6 151468 CEU:1.0;0.838 FUNCTIONAL_SNP rs1981696 chr7 106794100 Intron 6 144320 CEU:1.0;0.838 FUNCTIONAL_SNP rs6971675 chr7 106833797 Intron 6 104623 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12535081 chr7 106979291 Intron 6 40871 CEU:1.0;1.0 FUNCTIONAL_SNP rs10953530 chr7 106827796 Intron 6 110624 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10953531 chr7 106827867 Intron 6 110553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10953534 chr7 106913718 Intron 6 24702 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3823959 chr7 107009379 Intron 6 70959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs257382 chr7 106804249 Intergenic 6 134171 CEU:1.0;0.838 FUNCTIONAL_SNP rs10253291 chr7 106786550 Intron 6 151870 CEU:1.0;0.838 FUNCTIONAL_SNP rs3823960 chr7 107009349 Intron 7 70929 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6960148 chr7 106786142 Intron 7 152278 CEU:1.0;0.838 FUNCTIONAL_SNP rs1121312 chr7 106927820 Intron 7 10600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7804979 chr7 106999453 Intron 7 61033 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7781947 chr7 106902219 Intron 7 36201 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1018946 chr7 106851754 Intron 7 86666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1002935 chr7 106832361 Intron 7 106059 CEU:1.0;1.0, CHB:1.0;0.849, JPT:1.0;1.0 FUNCTIONAL_SNP rs6947857 chr7 106787266 Intron 7 151154 CEU:1.0;0.838 FUNCTIONAL_SNP rs17428071 chr7 106878200 Intron 7 60220 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0 FUNCTIONAL_SNP rs17481842 chr7 107121862 Intron 7 183442 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7800443 chr7 106910723 Intron 7 27697 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12534124 chr7 107119047 Intron 7 180627 CEU:0.937;0.878, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17429146 chr7 106964281 Intron 7 25861 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs12536603 chr7 107002573 Intron 7 64153 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs1989814 chr7 107045076 Intron 7 106656 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2395859 chr7 107029005 Intron 7 90585 CEU:1.0;0.887, CHB:1.0;0.795, JPT:1.0;1.0 FUNCTIONAL_SNP rs12532447 chr7 106940476 Intron 7 2056 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5002976 chr7 107050620 Intron 7 112200 CEU:1.0;1.0 FUNCTIONAL_SNP rs1978085 chr7 107095216 Intron 7 156796 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12532967 chr7 106937418 Intron 7 1002 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1548523 chr7 106944408 Intron 7 5988 CEU:1.0;1.0 FUNCTIONAL_SNP rs7783181 chr7 106977613 Intron 7 39193 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.938;0.828 FUNCTIONAL_SNP rs10953532 chr7 106881808 Intron 7 56612 CEU:1.0;0.897, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17429825 chr7 107050731 Intron 7 112311 CEU:1.0;1.0 FUNCTIONAL_SNP rs6977868 chr7 106790555 Intron 7 147865 CEU:1.0;0.809 FUNCTIONAL_SNP rs6947675 chr7 106817184 Intron 7 121236 CEU:1.0;1.0 FUNCTIONAL_SNP rs257373 chr7 106798290 Intron 7 140130 CEU:1.0;0.831 FUNCTIONAL_SNP rs12540475 chr7 106886295 Intron 7 52125 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0 FUNCTIONAL_SNP rs3801963 chr7 106898036 Intron 7 40384 CEU:1.0;1.0 FUNCTIONAL_SNP rs11766131 chr7 107071138 Intron 7 132718 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10253172 chr7 106786474 Intron 7 151946 CEU:1.0;0.838 FUNCTIONAL_SNP rs4730229 chr7 106925353 Intron 7 13067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4727670 chr7 106875965 Intron 7 62455 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;0.863 FUNCTIONAL_SNP rs4730231 chr7 106942039 Intron 7 3619 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6971774 chr7 106834139 Intron 7 104281 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4730242 chr7 107057373 Intron 7 118953 CEU:1.0;1.0 FUNCTIONAL_SNP rs4730248 chr7 107125939 Intron 7 187519 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;0.864 FUNCTIONAL_SNP rs7803290 chr7 106907353 Intron 7 31067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9641378 chr7 106868003 Intron 7 70417 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2107319 chr7 106863744 Intron 7 74676 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7793594 chr7 106891829 Intron 7 46591 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3729877 chr7 106787065 Intron 7 151355 CEU:1.0;0.838 FUNCTIONAL_SNP rs10487271 chr7 106898458 Intron 7 39962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12539895 chr7 107091849 Intron 7 153429 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4730250 chr7 107207695 Intron 6 ASSOCIATION 21068099 Osteoarthritis 7.22184874962 DUS4L FUNCTIONAL_SNP rs6957186 chr7 107200592 Intron 2b 7103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17404067 chr7 107168119 Intron 5a 39576 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10464620 chr7 107135653 Intron 5a 72042 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8180747 chr7 107106308 Intron 5b 101387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12533694 chr7 107102817 Intron 5b 104878 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs763386 chr7 107196723 Intron 5b 10972 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17403088 chr7 107111373 Intron 6 96322 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.549 FUNCTIONAL_SNP rs34084719 chr7 107095227 Intron 6 112468 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4730248 chr7 107125939 Intron 7 81756 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;0.864 FUNCTIONAL_SNP rs12535761 chr7 107139275 Intron 7 68420 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1978085 chr7 107095216 Intron 7 112479 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17481842 chr7 107121862 Intron 7 85833 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12539895 chr7 107091849 Intron 7 115846 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10953541 chr7 107244545 Intron 7 ASSOCIATION 21378988 Coronary heart disease 7.52287874528 BCAP29 FUNCTIONAL_SNP rs7785962 chr7 107243995 Intron 7 550 CEU:1.0;1.0, CHB:1.0;0.935, JPT:1.0;1.0 LEAD_SNP rs2108225 chr7 107453103 Intergenic 7 ASSOCIATION 19915573 Ulcerative colitis 7.0 SLC26A3 - DLD FUNCTIONAL_SNP rs6466191 chr7 107453511 Intergenic 5b 408 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10255250 chr7 107458062 Intergenic 6 4959 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4730273 chr7 107479519 Intergenic 7 ASSOCIATION 19122664 Ulcerative colitis 5.30102999566 SLC26A3 - DLD LEAD_SNP rs4730276 chr7 107484437 Intergenic 6 ASSOCIATION 19122664 Ulcerative colitis 5.04575749056 SLC26A3 - DLD FUNCTIONAL_SNP rs6952300 chr7 107487177 Intergenic 5b 2740 CEU:1.0;1.0, CHB:1.0;0.896, JPT:1.0;0.953, YRI:1.0;0.928 LEAD_SNP rs4510766 chr7 107492789 Intergenic 7 ASSOCIATION 21297633 Ulcerative colitis 15.6989700043 SLC26A3 - DLD FUNCTIONAL_SNP rs7778743 chr7 107490878 Intergenic 4 1911 CEU:1.0;0.886, CHB:1.0;0.867, JPT:1.0;0.907 FUNCTIONAL_SNP rs2108229 chr7 107500994 Intergenic 4 8205 CEU:0.957;0.843, YRI:0.789;0.515 FUNCTIONAL_SNP rs7811034 chr7 107515005 Intergenic 5a 22216 CEU:0.957;0.846, CHB:0.864;0.506, YRI:0.807;0.546 FUNCTIONAL_SNP rs8440 chr7 107561392 Intron 5a 68603 CEU:0.956;0.81 FUNCTIONAL_SNP rs13226236 chr7 107544742 Intron 5a 51953 CEU:0.956;0.81 FUNCTIONAL_SNP rs6956931 chr7 107521188 Intergenic 5b 28399 CEU:0.956;0.81 FUNCTIONAL_SNP rs6952300 chr7 107487177 Intergenic 5b 5612 CEU:1.0;0.85, CHB:1.0;0.518, JPT:1.0;0.562 FUNCTIONAL_SNP rs756382 chr7 107522867 Intergenic 5b 30078 CEU:0.956;0.81 FUNCTIONAL_SNP rs756383 chr7 107522962 Intergenic 5b 30173 CEU:0.956;0.81 FUNCTIONAL_SNP rs10272963 chr7 107486902 Intergenic 5b 5887 CEU:1.0;0.886, CHB:1.0;0.867, JPT:1.0;0.907 FUNCTIONAL_SNP rs17412104 chr7 107545586 Intron 6 52797 CEU:0.956;0.81 FUNCTIONAL_SNP rs2894481 chr7 107492370 Intergenic 6 419 CEU:1.0;1.0, CHB:1.0;0.712, JPT:1.0;0.865 FUNCTIONAL_SNP rs4730276 chr7 107484437 Intergenic 6 8352 CEU:1.0;0.85, JPT:1.0;0.536 FUNCTIONAL_SNP rs7778092 chr7 107522092 Intergenic 6 29303 CEU:0.956;0.81 FUNCTIONAL_SNP rs4598195 chr7 107503441 Intergenic 6 10652 CEU:0.957;0.846, CHB:0.864;0.506, YRI:0.807;0.546 FUNCTIONAL_SNP rs2237682 chr7 107535236 Intron 6 42447 CEU:0.956;0.81 FUNCTIONAL_SNP rs2237685 chr7 107574784 Intron 6 81995 CEU:0.956;0.81 FUNCTIONAL_SNP rs2237686 chr7 107575162 Intron 6 82373 CEU:0.956;0.81 FUNCTIONAL_SNP rs6976266 chr7 107502141 Intergenic 7 9352 CEU:0.957;0.846, CHB:0.864;0.506, YRI:0.807;0.546 FUNCTIONAL_SNP rs4727692 chr7 107526014 Intergenic 7 33225 CEU:0.956;0.81 FUNCTIONAL_SNP rs6466206 chr7 107551759 Intron 7 58970 CEU:0.956;0.81 FUNCTIONAL_SNP rs6466207 chr7 107555179 Intron 7 62390 CEU:0.956;0.81 FUNCTIONAL_SNP rs6944829 chr7 107525732 Intergenic 7 32943 CEU:0.956;0.81 FUNCTIONAL_SNP rs3801934 chr7 107540074 Intron 7 47285 CEU:0.956;0.81 FUNCTIONAL_SNP rs12669950 chr7 107508000 Intergenic 7 15211 CEU:0.957;0.846, CHB:0.864;0.506 LEAD_SNP rs886774 chr7 107495434 Intergenic 7 ASSOCIATION 19915572 Ulcerative colitis 7.52287874528 SLC26A3 - DLD FUNCTIONAL_SNP rs4518 chr7 107560191 Exon,non-coding 5b 64757 CEU:0.958;0.847, YRI:0.883;0.535 FUNCTIONAL_SNP rs4564 chr7 107559911 Exon,non-coding 6 64477 CEU:1.0;0.853, YRI:0.883;0.535 FUNCTIONAL_SNP rs10215427 chr7 107498242 Intergenic 2b 2808 CEU:1.0;1.0, CHB:1.0;0.654, JPT:0.87;0.673 FUNCTIONAL_SNP rs10227605 chr7 107532090 Intron 2b 36656 CEU:1.0;0.888, YRI:0.883;0.535 FUNCTIONAL_SNP rs10267797 chr7 107515300 Intergenic 2b 19866 CEU:1.0;0.924 FUNCTIONAL_SNP rs2108223 chr7 107561155 Intron 4 65721 CEU:1.0;0.879, YRI:1.0;0.61 FUNCTIONAL_SNP rs2108228 chr7 107500913 Intergenic 4 5479 CEU:1.0;0.96 FUNCTIONAL_SNP rs2108222 chr7 107544208 Intron 5a 48774 CEU:1.0;0.853 FUNCTIONAL_SNP rs2108224 chr7 107583626 Intron 5a 88192 CEU:0.957;0.813 FUNCTIONAL_SNP rs2108230 chr7 107515524 Intergenic 5a 20090 CEU:1.0;0.924 FUNCTIONAL_SNP rs6949033 chr7 107495217 Intergenic 5b 217 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2395932 chr7 107495145 Intergenic 5b 289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4730281 chr7 107581936 Intron 5b 86502 CEU:1.0;0.853, YRI:1.0;0.552 FUNCTIONAL_SNP rs6964972 chr7 107499996 Intergenic 6 4562 CEU:1.0;0.961 FUNCTIONAL_SNP rs2894482 chr7 107509781 Intergenic 6 14347 CEU:1.0;0.916 FUNCTIONAL_SNP rs4730279 chr7 107541557 Intron 6 46123 CEU:1.0;0.883, YRI:0.871;0.504 FUNCTIONAL_SNP rs6965674 chr7 107528102 Intergenic 6 32668 CEU:1.0;0.883 FUNCTIONAL_SNP rs10263341 chr7 107545799 Intron 6 50365 CEU:1.0;0.851 FUNCTIONAL_SNP rs3801937 chr7 107536298 Intron 6 40864 CEU:1.0;0.888, YRI:0.883;0.534 FUNCTIONAL_SNP rs12668766 chr7 107516709 Intergenic 6 21275 CEU:1.0;0.924, YRI:1.0;0.585 FUNCTIONAL_SNP rs4348408 chr7 107509273 Intergenic 6 13839 CEU:1.0;0.924 FUNCTIONAL_SNP rs3757712 chr7 107530486 Intergenic 7 35052 CEU:1.0;0.872, YRI:0.883;0.535 FUNCTIONAL_SNP rs1468433 chr7 107495331 Intergenic 7 103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;0.656 FUNCTIONAL_SNP rs6466201 chr7 107512610 Intergenic 7 17176 CEU:1.0;0.924 FUNCTIONAL_SNP rs6466205 chr7 107540405 Intron 7 44971 CEU:1.0;0.853, YRI:0.873;0.554 FUNCTIONAL_SNP rs4730280 chr7 107549946 Intron 7 54512 CEU:1.0;0.919, YRI:0.883;0.533 FUNCTIONAL_SNP rs10271497 chr7 107579674 Intron 7 84240 CEU:1.0;0.853 FUNCTIONAL_SNP rs6949753 chr7 107512495 Intergenic 7 17061 CEU:1.0;0.92 FUNCTIONAL_SNP rs6947045 chr7 107499947 Intergenic 7 4513 CEU:1.0;0.961 FUNCTIONAL_SNP rs2007417 chr7 107500247 Intergenic 7 4813 CEU:1.0;0.917, JPT:0.832;0.523 LEAD_SNP rs4598195 chr7 107503441 Intergenic 6 ASSOCIATION 20228799 Ulcerative colitis 7.09691001301 SLC26A3 - DLD ASSOCIATION 19122664 Ulcerative colitis 6.0 SLC26A3 - DLD FUNCTIONAL_SNP rs8721 chr7 107559722 Exon,non-coding 6 56281 CEU:1.0;0.956 FUNCTIONAL_SNP rs17411033 chr7 107519996 Intergenic 2a 16555 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6961243 chr7 107521404 Intergenic 3a 17963 CEU:1.0;0.936 FUNCTIONAL_SNP rs6943999 chr7 107531279 Intergenic 4 27838 CEU:1.0;0.955, CHB:0.94;0.836, JPT:1.0;0.778 FUNCTIONAL_SNP rs2108229 chr7 107500994 Intergenic 4 2447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7778743 chr7 107490878 Intergenic 4 12563 CEU:0.916;0.805, CHB:0.815;0.518 FUNCTIONAL_SNP rs8440 chr7 107561392 Intron 5a 57951 CEU:1.0;0.96, CHB:0.946;0.849, JPT:1.0;0.775 FUNCTIONAL_SNP rs13226236 chr7 107544742 Intron 5a 41301 CEU:1.0;0.96, CHB:0.943;0.801, JPT:1.0;0.822 FUNCTIONAL_SNP rs7811034 chr7 107515005 Intergenic 5a 11564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs756382 chr7 107522867 Intergenic 5b 19426 CEU:1.0;0.96, CHB:0.946;0.849, JPT:1.0;0.822 FUNCTIONAL_SNP rs756383 chr7 107522962 Intergenic 5b 19521 CEU:1.0;0.96, CHB:0.942;0.887, JPT:1.0;0.822 FUNCTIONAL_SNP rs10272963 chr7 107486902 Intergenic 5b 16539 CEU:0.916;0.805, CHB:0.815;0.518 FUNCTIONAL_SNP rs6956931 chr7 107521188 Intergenic 5b 17747 CEU:1.0;0.96, CHB:0.946;0.849, JPT:1.0;0.822 FUNCTIONAL_SNP rs7777259 chr7 107560651 Intron 5b 57210 CEU:1.0;0.917, CHB:0.939;0.832, JPT:0.944;0.769 FUNCTIONAL_SNP rs17412104 chr7 107545586 Intron 6 42145 CEU:1.0;0.96, CHB:0.94;0.792, JPT:1.0;0.822 FUNCTIONAL_SNP rs13222925 chr7 107583241 Intron 6 79800 CEU:0.959;0.92, JPT:0.938;0.687 FUNCTIONAL_SNP rs2894481 chr7 107492370 Intergenic 6 11071 CEU:0.957;0.846 FUNCTIONAL_SNP rs2237685 chr7 107574784 Intron 6 71343 CEU:1.0;0.96, CHB:0.94;0.755, JPT:1.0;0.782 FUNCTIONAL_SNP rs2237686 chr7 107575162 Intron 6 71721 CEU:1.0;0.96, CHB:0.94;0.755, JPT:1.0;0.782 FUNCTIONAL_SNP rs7778092 chr7 107522092 Intergenic 6 18651 CEU:1.0;0.96, CHB:0.943;0.801, JPT:1.0;0.822 FUNCTIONAL_SNP rs2237682 chr7 107535236 Intron 6 31795 CEU:1.0;0.96, CHB:0.943;0.801, JPT:1.0;0.822 FUNCTIONAL_SNP rs4510766 chr7 107492789 Intergenic 7 10652 CEU:0.957;0.846, CHB:0.864;0.506, YRI:0.807;0.546 FUNCTIONAL_SNP rs6944829 chr7 107525732 Intergenic 7 22291 CEU:1.0;0.96, CHB:0.946;0.849, JPT:1.0;0.822 FUNCTIONAL_SNP rs6976266 chr7 107502141 Intergenic 7 1300 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12705424 chr7 107519723 Intergenic 7 16282 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4727692 chr7 107526014 Intergenic 7 22573 CEU:1.0;0.96, CHB:0.946;0.849, JPT:1.0;0.822 FUNCTIONAL_SNP rs6466206 chr7 107551759 Intron 7 48318 CEU:1.0;0.96, CHB:0.946;0.849, JPT:0.944;0.769 FUNCTIONAL_SNP rs6466207 chr7 107555179 Intron 7 51738 CEU:1.0;0.96, CHB:0.946;0.849, JPT:0.944;0.769 FUNCTIONAL_SNP rs3801934 chr7 107540074 Intron 7 36633 CEU:1.0;0.96 FUNCTIONAL_SNP rs12669950 chr7 107508000 Intergenic 7 4559 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2158836 chr7 107580839 Intron 5b ASSOCIATION 19122664 Ulcerative colitis 5.15490195999 LAMB1 FUNCTIONAL_SNP rs10953555 chr7 107581346 Intron 5b 507 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11496130 chr7 107581035 Intron 7 196 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6968385 chr7 110047471 Intergenic 4 ASSOCIATION 18937294 Attention deficit hyperactivity disorder (time to onset) 5.69897000434 RPL3P8 - IMMP2L FUNCTIONAL_SNP rs13228785 chr7 110043681 Intergenic 7 3790 CEU:1.0;0.893, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10279573 chr7 110467221 Intron 6 ASSOCIATION 19734545 Cognitive performance 5.52287874528 IMMP2L FUNCTIONAL_SNP rs12334096 chr7 110400084 Intron 5b 67137 CEU:1.0;0.925, CHB:1.0;0.915, JPT:1.0;0.877, YRI:1.0;0.918 FUNCTIONAL_SNP rs7781214 chr7 110402885 Intron 5b 64336 CEU:1.0;0.82, CHB:1.0;0.916, JPT:1.0;0.877, YRI:0.958;0.816 FUNCTIONAL_SNP rs1569122 chr7 110459927 Intron 6 7294 CEU:1.0;0.874, CHB:1.0;0.916, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs6976233 chr7 110404841 Intron 7 62380 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;0.877, YRI:1.0;0.961 LEAD_SNP rs12531640 chr7 110479535 Intron 7 ASSOCIATION 19734545 Cognitive performance 5.22184874962 IMMP2L LEAD_SNP rs17159640 chr7 112086333 Intron 7 ASSOCIATION 20400778 Mortality among heart failure patients 5.04575749056 IFRD1 LEAD_SNP rs10229603 chr7 112628373 Intron 5b ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.30102999566 C7orf60 - GPR85 LEAD_SNP rs10953730 chr7 112911410 Intergenic 5a ASSOCIATION 19043545 Serum metabolites 6.69897000434 GPR85 - PPP1R3A FUNCTIONAL_SNP rs2140636 chr7 112920080 Intergenic 6 8670 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs11982259 chr7 112896706 Intergenic 6 14704 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs11980511 chr7 112895237 Intergenic 7 16173 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13228379 chr7 112921733 Intergenic 7 10323 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4236601 chr7 116162729 Intergenic 5a ASSOCIATION 20835238 Glaucoma (primary open-angle) 10.6989700043 CAV2 - CAV1 FUNCTIONAL_SNP rs2024211 chr7 116153025 Intergenic 4 9704 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.766 FUNCTIONAL_SNP rs10258482 chr7 116150095 Intergenic 5b 12634 CEU:0.944;0.892, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10281637 chr7 116151338 Intergenic 6 11391 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10262524 chr7 116150952 Intergenic 7 11777 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6969706 chr7 116154831 Intergenic 7 7898 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3807989 chr7 116186241 Intron 4 ASSOCIATION 20062063 Electrocardiographic traits 12.15490196 CAV1 ASSOCIATION 20062060 PR interval 27.3979400087 CAV1 FUNCTIONAL_SNP rs1997572 chr7 116198828 Intron 6 12587 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs11773845 chr7 116191301 Intron 7 5060 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10243024 chr7 116346603 Intron 4 ASSOCIATION 19010793 Multiple sclerosis (severity) 5.22184874962 MET LEAD_SNP rs7782376 chr7 116577124 Intergenic 5b ASSOCIATION 20125193 Cognitive test performance 5.09691001301 CAPZA2 - ST7OT1 LEAD_SNP rs7808424 chr7 117067822 Intergenic 5b ASSOCIATION 21378990 Coronary heart disease 6.0 ASZ1 FUNCTIONAL_SNP rs1029396 chr7 117024820 Coding 5b 43002 CEU:1.0;1.0, CHB:0.951;0.904, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs2237726 chr7 117256374 Exon,non-coding 7 188552 CEU:1.0;1.0 FUNCTIONAL_SNP rs4148682 chr7 117119183 Intergenic 2b 51361 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.817, YRI:1.0;0.589 FUNCTIONAL_SNP rs2299445 chr7 117246315 Intron 5a 178493 CEU:1.0;1.0 FUNCTIONAL_SNP rs2254742 chr7 117264126 Intron 5a 196304 CEU:1.0;1.0 FUNCTIONAL_SNP rs4148709 chr7 117220684 Intron 5b 152862 CEU:1.0;1.0, CHB:0.847;0.717, YRI:1.0;1.0 FUNCTIONAL_SNP rs4727850 chr7 117044290 Intron 6 23532 CEU:1.0;0.828, YRI:1.0;0.825 FUNCTIONAL_SNP rs2237721 chr7 117133720 Intron 6 65898 CEU:1.0;1.0, CHB:0.948;0.856, YRI:1.0;1.0 FUNCTIONAL_SNP rs4730778 chr7 117016924 Intron 6 50898 CEU:1.0;1.0, CHB:0.951;0.904, JPT:0.948;0.898, YRI:1.0;1.0 FUNCTIONAL_SNP rs10487365 chr7 117063404 Intron 6 4418 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1469486 chr7 117219835 Intron 7 152013 CEU:1.0;0.814 FUNCTIONAL_SNP rs3808183 chr7 117230780 Intron 7 162958 CEU:1.0;1.0, CHB:0.896;0.765 FUNCTIONAL_SNP rs6979185 chr7 117059378 Intron 7 8444 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs10953841 chr7 116969812 Intergenic 7 98010 CEU:1.0;1.0, CHB:0.948;0.856, JPT:0.94;0.753, YRI:1.0;1.0 FUNCTIONAL_SNP rs7797932 chr7 117257687 Intron 7 189865 CEU:1.0;1.0, YRI:1.0;0.607 FUNCTIONAL_SNP rs12535986 chr7 117069811 Intergenic 7 1989 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10953843 chr7 117058568 Intron 7 9254 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs739517 chr7 116955699 Intron 7 112123 CEU:1.0;1.0, CHB:0.948;0.856, JPT:0.934;0.665, YRI:1.0;0.589 FUNCTIONAL_SNP rs2283054 chr7 117126401 Intron 7 58579 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.817, YRI:1.0;1.0 FUNCTIONAL_SNP rs2237725 chr7 117181152 Intron 7 113330 CEU:1.0;1.0, CHB:0.948;0.856, YRI:1.0;1.0 FUNCTIONAL_SNP rs11769166 chr7 117077121 Intergenic 7 9299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4730786 chr7 117104891 Intergenic 7 37069 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.859, YRI:1.0;1.0 FUNCTIONAL_SNP rs4148698 chr7 117173114 Intron 7 105292 CEU:1.0;1.0, CHB:0.948;0.856, YRI:1.0;1.0 FUNCTIONAL_SNP rs4148703 chr7 117181509 Intron 7 113687 CEU:1.0;1.0, CHB:0.948;0.856, YRI:1.0;1.0 LEAD_SNP rs7776725 chr7 121033121 Intron 5a ASSOCIATION 19396169 Biomedical quantitative traits 5.69897000434 FAM3C ASSOCIATION 19396169 Biomedical quantitative traits 11.0 FAM3C LEAD_SNP rs10253361 chr7 121275229 Intergenic 7 ASSOCIATION 21529783 Alcoholism (alcohol dependence factor score) 5.22184874962 RPL18P4 - PTPRZ1 FUNCTIONAL_SNP rs10266178 chr7 121272606 Intergenic 6 2623 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10266221 chr7 121265437 Intergenic 6 9792 CEU:1.0;0.96, CHB:1.0;0.95, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs988022 chr7 121269679 Intergenic 6 5550 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1476626 chr7 121269366 Intergenic 7 5863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10277464 chr7 121271331 Intergenic 7 3898 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10226926 chr7 121275346 Intergenic 7 117 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2429582 chr7 122202593 Intron 6 ASSOCIATION 20171287 Brain structure 6.22184874962 CADPS2 LEAD_SNP rs17691394 chr7 126324591 Intron 5b ASSOCIATION 20009918 Carotid atherosclerosis in HIV infection 6.04575749056 GRM8 FUNCTIONAL_SNP rs17684282 chr7 126265711 Intron 5b 58880 CEU:1.0;0.862 LEAD_SNP rs11971186 chr7 126437897 Intron 7 ASSOCIATION 20237162 Plasma chemerin levels 5.04575749056 GRM8 LEAD_SNP rs17864092 chr7 126639604 Intron 7 ASSOCIATION 20800221 Depression--quantitative trait 5.22184874962 GRM8 LEAD_SNP rs4728142 chr7 128573967 Intergenic 5b ASSOCIATION 21297633 Ulcerative colitis 7.69897000434 KCP - IRF5 ASSOCIATION 19838193 Systemic lupus erythematosus 18.096910013 KCP - IRF5 LEAD_SNP rs10488631 chr7 128594183 Intergenic 3a ASSOCIATION 21750679 Systemic sclerosis 6.39794000867 IRF5 - TNPO3 ASSOCIATION 21408207 Systemic lupus erythematosus 17.15490196 IRF5 - TNPO3 ASSOCIATION 20639880 Primary biliary cirrhosis 9.52287874528 IRF5 - TNPO3 ASSOCIATION 20453842 Rheumatoid arthritis 10.3979400087 IRF5 - TNPO3 ASSOCIATION 20383147 Systemic sclerosis 12.6989700043 IRF5 - TNPO3 ASSOCIATION 19458352 Primary biliary cirrhosis 6.69897000434 IRF5 - TNPO3 ASSOCIATION 18204098 Systemic lupus erythematosus 10.6989700043 IRF5 - TNPO3 FUNCTIONAL_SNP rs13239597 chr7 128695983 Intergenic 5a 101800 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs17340351 chr7 128708797 Intergenic 5b 114614 CEU:0.932;0.869, CHB:1.0;1.0 FUNCTIONAL_SNP rs12539476 chr7 128657483 Intron 5b 63300 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs17424602 chr7 128687940 Intron 5b 93757 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs17424921 chr7 128708122 Intergenic 6 113939 CEU:0.924;0.855, CHB:1.0;1.0 FUNCTIONAL_SNP rs17338998 chr7 128618559 Intron 7 24376 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs13236009 chr7 128663173 Intron 7 68990 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12531054 chr7 128644251 Intron 7 50068 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs13246321 chr7 128701331 Intergenic 7 107148 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12534421 chr7 128624073 Intron 7 29890 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12535158 chr7 128625019 Intron 7 30836 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12531711 chr7 128617466 Intron 7 23283 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs12531711 chr7 128617466 Intron 7 ASSOCIATION 21399635 Primary biliary cirrhosis 16.0457574906 TNPO3 ASSOCIATION 21408207 Systemic lupus erythematosus 8.22184874962 TNPO3 FUNCTIONAL_SNP rs10488631 chr7 128594183 Intergenic 3a 23283 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs13239597 chr7 128695983 Intergenic 5a 78517 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12539476 chr7 128657483 Intron 5b 40017 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs17424602 chr7 128687940 Intron 5b 70474 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs17340351 chr7 128708797 Intergenic 5b 91331 CEU:0.932;0.869, CHB:1.0;1.0 FUNCTIONAL_SNP rs17424921 chr7 128708122 Intergenic 6 90656 CEU:0.924;0.855, CHB:1.0;1.0 FUNCTIONAL_SNP rs17338998 chr7 128618559 Intron 7 1093 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs13236009 chr7 128663173 Intron 7 45707 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12531054 chr7 128644251 Intron 7 26785 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs13246321 chr7 128701331 Intergenic 7 83865 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12534421 chr7 128624073 Intron 7 6607 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12535158 chr7 128625019 Intron 7 7553 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs12537284 chr7 128717906 Intergenic 6 ASSOCIATION 18204446 Systemic lupus erythematosus 18.3979400087 TPI1P2 - CYCSP20 LEAD_SNP rs7787531 chr7 129023597 Intron 5a ASSOCIATION 20694014 Tuberculosis 5.04575749056 AHCYL2 LEAD_SNP rs11556924 chr7 129663496 Coding 6 ASSOCIATION 21378990 Coronary heart disease 17.0457574906 ZC3HC1 LEAD_SNP rs972283 chr7 130466854 Intergenic 7 ASSOCIATION 20581827 Type 2 diabetes 9.69897000434 KLF14 - FLJ43663 FUNCTIONAL_SNP rs13233731 chr7 130437689 Intergenic 5b 29165 CEU:1.0;1.0, JPT:0.764;0.583 FUNCTIONAL_SNP rs10954284 chr7 130463758 Intergenic 6 3096 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs3996352 chr7 130444934 Intergenic 7 21920 CEU:1.0;1.0 FUNCTIONAL_SNP rs17789506 chr7 130445574 Intergenic 7 21280 CEU:1.0;1.0, CHB:0.77;0.536, JPT:0.82;0.636 FUNCTIONAL_SNP rs13241538 chr7 130439862 Intergenic 7 26992 CEU:1.0;1.0, CHB:0.763;0.501, JPT:0.824;0.644 FUNCTIONAL_SNP rs11979110 chr7 130436459 Intergenic 7 30395 CEU:1.0;1.0, JPT:0.82;0.636 FUNCTIONAL_SNP rs13234407 chr7 130438214 Intergenic 7 28640 CEU:1.0;1.0, JPT:0.82;0.636 FUNCTIONAL_SNP rs13241165 chr7 130432538 Intergenic 7 34316 CEU:1.0;1.0, CHB:0.766;0.506, JPT:0.824;0.644 FUNCTIONAL_SNP rs4731702 chr7 130433384 Intergenic 7 33470 CEU:1.0;1.0, JPT:0.817;0.631 FUNCTIONAL_SNP rs11765979 chr7 130445877 Intergenic 7 20977 CEU:1.0;1.0 FUNCTIONAL_SNP rs13234269 chr7 130429186 Intergenic 7 37668 CEU:1.0;1.0, JPT:0.82;0.636 FUNCTIONAL_SNP rs13230111 chr7 130437124 Intergenic 7 29730 CEU:1.0;1.0, JPT:0.82;0.636 LEAD_SNP rs10265216 chr7 130900121 Intron 6 ASSOCIATION 20038947 Major depressive disorder (broad) 5.52287874528 MKLN1 FUNCTIONAL_SNP rs1565051 chr7 130897144 Intron 2b 2977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.936;0.875 FUNCTIONAL_SNP rs7811386 chr7 130901642 Intron 5b 1521 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.936;0.876 FUNCTIONAL_SNP rs1979567 chr7 130903178 Intron 7 3057 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 LEAD_SNP rs12534221 chr7 131287990 Intergenic 4 ASSOCIATION 20932310 AB1-42 6.04575749056 RPL31P36 - RPS14P10 LEAD_SNP rs11761231 chr7 131370039 Intergenic 5b ASSOCIATION 17554300 Rheumatoid arthritis 6.39794000867 RPS14P10 - RPS15AP22 LEAD_SNP rs1106683 chr7 131453525 Intergenic 5a ASSOCIATION 17903300 Body mass index 7.0 RPS15AP22 - PLXNA4 FUNCTIONAL_SNP rs12534413 chr7 131453964 Intergenic 5a 439 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2333893 chr7 131453982 Intergenic 5a 457 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs888538 chr7 131454143 Intergenic 5b 618 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs888539 chr7 131454208 Intergenic 5b 683 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.912;0.832 FUNCTIONAL_SNP rs888540 chr7 131454224 Intergenic 5b 699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2878054 chr7 131454160 Intergenic 5b 635 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4535659 chr7 131454056 Intergenic 5b 531 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6960129 chr7 131454649 Intergenic 7 1124 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1477225 chr7 131454962 Intergenic 7 1437 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1477226 chr7 131455364 Intergenic 7 1839 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1477228 chr7 131455563 Intergenic 7 2038 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1106684 chr7 131453665 Intergenic 5a ASSOCIATION 17903300 Body mass index 5.69897000434 RPS15AP22 - PLXNA4 LEAD_SNP rs10488172 chr7 133335176 Intron 5b ASSOCIATION 17903302 Tonometry 5.09691001301 EXOC4 LEAD_SNP rs4732038 chr7 134250322 Intron 5a ASSOCIATION 20834067 Longevity 6.0 AKR1B15 FUNCTIONAL_SNP rs7787818 chr7 134251597 Intron 7 1275 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4294134 chr7 135293128 Intron 7 ASSOCIATION 21623375 Paget's disease 9.09691001301 NUP205 LEAD_SNP rs6467710 chr7 137203819 Intron 6 ASSOCIATION 21502085 AIDS progression 6.22184874962 DGKI FUNCTIONAL_SNP rs834099 chr7 137263544 Intron 3a 59725 CEU:1.0;1.0 FUNCTIONAL_SNP rs6977097 chr7 137219055 Intron 5b 15236 CEU:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs1528101 chr7 137193485 Intron 5b 10334 CEU:1.0;1.0 FUNCTIONAL_SNP rs10236148 chr7 137241249 Intron 6 37430 CEU:1.0;1.0 FUNCTIONAL_SNP rs17372605 chr7 137240367 Intron 6 36548 CEU:1.0;1.0 FUNCTIONAL_SNP rs834093 chr7 137210014 Intron 7 6195 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.896 FUNCTIONAL_SNP rs7781490 chr7 137187798 Intron 7 16021 CEU:1.0;1.0, CHB:0.929;0.863, JPT:1.0;0.904 FUNCTIONAL_SNP rs7787693 chr7 137197402 Intron 7 6417 CEU:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs10276225 chr7 137245417 Intron 7 41598 CEU:1.0;1.0 FUNCTIONAL_SNP rs10254089 chr7 137199692 Intron 7 4127 CEU:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs10262297 chr7 137210637 Intron 7 6818 CEU:1.0;1.0 FUNCTIONAL_SNP rs17169223 chr7 137217391 Intron 7 13572 CEU:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs10276067 chr7 137245278 Intron 7 41459 CEU:1.0;1.0 FUNCTIONAL_SNP rs10237813 chr7 137220139 Intron 7 16320 CEU:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs834439 chr7 137259346 Intron 7 55527 CEU:1.0;1.0 FUNCTIONAL_SNP rs10480524 chr7 137190434 Intron 7 13385 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs357394 chr7 138049387 Intergenic 7 ASSOCIATION 17903307 Pulmonary function traits (other) 5.04575749056 RPS17P12 - IMPDH1P3 FUNCTIONAL_SNP rs438660 chr7 138065330 Intergenic 5b 15943 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs448649 chr7 138067907 Intergenic 5b 18520 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs400693 chr7 138064526 Intergenic 5b 15139 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs357357 chr7 138056815 Intergenic 6 7428 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs357361 chr7 138054445 Intergenic 6 5058 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs451408 chr7 138065670 Intergenic 7 16283 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs357358 chr7 138056542 Intergenic 7 7155 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.826 FUNCTIONAL_SNP rs427508 chr7 138067176 Intergenic 7 17789 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1874326 chr7 138157390 Intron 3a ASSOCIATION 19197348 Quantitative traits 5.04575749056 TRIM24 FUNCTIONAL_SNP rs1077772 chr7 138152431 Intron 6 4959 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.924 LEAD_SNP rs3800569 chr7 138411425 Intron 5b ASSOCIATION 21326311 F-cell distribution 5.22184874962 ATP6V0A4 LEAD_SNP rs10237118 chr7 140231130 Intron 7 ASSOCIATION 20395239 Optic disc size (cup) 5.39794000867 DENND2A FUNCTIONAL_SNP rs2363830 chr7 140231006 Intron 6 124 CEU:1.0;1.0 FUNCTIONAL_SNP rs10280493 chr7 140230269 Intron 7 861 CEU:1.0;1.0 LEAD_SNP rs713598 chr7 141673345 Coding 7 ASSOCIATION 20675712 Bitter taste response 103.698970004 TAS2R38 LEAD_SNP rs11767557 chr7 143109139 Intron 5b ASSOCIATION 21460841 Alzheimer's disease (late onset) 9.22184874962 EPHA1 - TAS2R62P FUNCTIONAL_SNP rs11762262 chr7 143107876 Intron 5b 1263 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0 FUNCTIONAL_SNP rs7791765 chr7 143099107 Intron 7 10032 CEU:1.0;0.93, CHB:1.0;0.924, JPT:1.0;1.0, YRI:0.908;0.605 LEAD_SNP rs10487524 chr7 144841531 Intergenic 7 ASSOCIATION 20732626 Attention deficit hyperactivity disorder 5.04575749056 TPK1 - CNTNAP2 FUNCTIONAL_SNP rs11767579 chr7 144839952 Intergenic 7 1579 CEU:1.0;0.93, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12531488 chr7 144892086 Intergenic 7 ASSOCIATION 20100581 Brain imaging 0 - FUNCTIONAL_SNP rs13221722 chr7 144891618 Intergenic 6 468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs7786717 chr7 144889286 Intergenic 6 2800 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.64 FUNCTIONAL_SNP rs2371838 chr7 144885248 Intergenic 6 6838 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91 FUNCTIONAL_SNP rs12534658 chr7 144891996 Intergenic 7 90 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.811, YRI:1.0;1.0 FUNCTIONAL_SNP rs7786860 chr7 144889158 Intergenic 7 2928 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10262936 chr7 144886172 Intergenic 7 5914 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.655 LEAD_SNP rs802568 chr7 145959243 Intron 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.69897000434 CNTNAP2 FUNCTIONAL_SNP rs11980812 chr7 145966859 Intron 6 7616 CEU:1.0;1.0 FUNCTIONAL_SNP rs10227967 chr7 145954052 Intron 6 5191 CEU:1.0;1.0 FUNCTIONAL_SNP rs11981576 chr7 145967141 Intron 6 7898 CEU:1.0;1.0 FUNCTIONAL_SNP rs802569 chr7 145960944 Intron 6 1701 CEU:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs7808651 chr7 145969651 Intron 7 10408 CEU:1.0;1.0 FUNCTIONAL_SNP rs802506 chr7 145980261 Intron 7 21018 CEU:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs802558 chr7 145967380 Intron 7 8137 CEU:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs802567 chr7 145958560 Intron 7 683 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs802571 chr7 145962186 Intron 7 2943 CEU:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs10276255 chr7 145993544 Intron 7 34301 CEU:1.0;1.0 FUNCTIONAL_SNP rs10246142 chr7 145959434 Intron 7 191 CEU:1.0;1.0 LEAD_SNP rs7799181 chr7 146048830 Intron 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.69897000434 CNTNAP2 FUNCTIONAL_SNP rs6973230 chr7 146072499 Intron 4 23669 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10487937 chr7 146057890 Intron 5a 9060 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1860681 chr7 146056420 Intron 5b 7590 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7790714 chr7 146041966 Intron 6 6864 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6973797 chr7 146072817 Intron 6 23987 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7785552 chr7 146037306 Intron 7 11524 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.852 FUNCTIONAL_SNP rs6969729 chr7 146035247 Intron 7 13583 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2214681 chr7 147702692 Intron 6 ASSOCIATION 17903296 Bone mineral density 5.52287874528 CNTNAP2 FUNCTIONAL_SNP rs12532290 chr7 147706981 Intron 6 4289 CEU:1.0;0.952, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;0.87 LEAD_SNP rs7807268 chr7 148258048 Intergenic 7 ASSOCIATION 17554300 Crohn's disease 5.39794000867 CNTNAP2 - RPL32P17 LEAD_SNP rs855913 chr7 149203662 Intergenic 6 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 7.39794000867 ZNF746 - ZNF767 LEAD_SNP rs2968864 chr7 150622162 Intergenic 6 ASSOCIATION 19305408 QT interval 15.096910013 ABP1 - KCNH2 LEAD_SNP rs2968863 chr7 150623137 Intergenic 7 ASSOCIATION 19305409 QT interval 14.6989700043 ABP1 - KCNH2 LEAD_SNP rs4725982 chr7 150637863 Intergenic 5b ASSOCIATION 20062061 Electrocardiographic traits 5.52287874528 ABP1 - KCNH2 ASSOCIATION 19305408 QT interval 15.3010299957 ABP1 - KCNH2 FUNCTIONAL_SNP rs1805120 chr7 150649531 Coding 5b 11668 CEU:1.0;0.946, CHB:1.0;0.749, JPT:0.78;0.504, YRI:0.949;0.818 FUNCTIONAL_SNP rs13228494 chr7 150637094 Intergenic 6 769 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;1.0 FUNCTIONAL_SNP rs758887 chr7 150634448 Intergenic 7 3415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3807375 chr7 150667210 Intron 5b ASSOCIATION 20062063 Electrocardiographic traits 10.3010299957 KCNH2 FUNCTIONAL_SNP rs1805121 chr7 150648789 Coding 5b 18421 CEU:1.0;0.959 LEAD_SNP rs13232179 chr7 151120948 Intergenic 6 ASSOCIATION 21347282 Coronary heart disease 6.0 WDR86 - CRYGN FUNCTIONAL_SNP rs1558299 chr7 151121676 Intergenic 4 728 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9655607 chr7 151114229 Intergenic 4 6719 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.951, YRI:1.0;0.83 LEAD_SNP rs7805747 chr7 151407801 Intron 5a ASSOCIATION 20383146 Chronic kidney disease 11.3979400087 PRKAG2 FUNCTIONAL_SNP rs10224002 chr7 151415041 Intron 5b 7240 CEU:1.0;1.0 FUNCTIONAL_SNP rs10480299 chr7 151405818 Intron 5b 1983 CEU:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10224210 chr7 151413194 Intron 5b 5393 CEU:1.0;0.948 FUNCTIONAL_SNP rs10480300 chr7 151406005 Intron 7 1796 CEU:1.0;1.0 LEAD_SNP rs10224002 chr7 151415041 Intron 5b ASSOCIATION 19862010 Hematocrit 14.2218487496 PRKAG2 ASSOCIATION 19862010 Hemoglobin 14.5228787453 PRKAG2 FUNCTIONAL_SNP rs7805747 chr7 151407801 Intron 5a 7240 CEU:1.0;1.0 FUNCTIONAL_SNP rs10480299 chr7 151405818 Intron 5b 9223 CEU:1.0;1.0 FUNCTIONAL_SNP rs10224210 chr7 151413194 Intron 5b 1847 CEU:1.0;0.948 FUNCTIONAL_SNP rs10480300 chr7 151406005 Intron 7 9036 CEU:1.0;1.0 LEAD_SNP rs7795096 chr7 151546589 Intron 5b ASSOCIATION 21305692 Bipolar disorder (age of onset and psychomotor symptoms) 5.69897000434 PRKAG2 LEAD_SNP rs6464375 chr7 153625843 Intron 7 ASSOCIATION 20686608 Pancreatic cancer 6.39794000867 DPP6 FUNCTIONAL_SNP rs7779540 chr7 153622662 Intron 7 3181 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10260404 chr7 154210798 Intron 7 ASSOCIATION 18987618 Amyotrophic lateral sclerosis 5.52287874528 DPP6 ASSOCIATION 18084291 Amyotrophic lateral sclerosis 7.30102999566 DPP6 ASSOCIATION 18057069 Amyotrophic lateral sclerosis 5.52287874528 DPP6 LEAD_SNP rs6943029 chr7 155762157 Intergenic 5b ASSOCIATION 20526338 Platelet aggregation 7.09691001301 SHH - NCRNA00244 FUNCTIONAL_SNP rs10464141 chr7 155766921 Intergenic 5b 4764 CEU:1.0;1.0, CHB:0.799;0.6, JPT:1.0;0.781 FUNCTIONAL_SNP rs12534938 chr7 155765548 Intergenic 5b 3391 CEU:1.0;0.848, CHB:0.823;0.642, JPT:1.0;0.766 FUNCTIONAL_SNP rs6459976 chr7 155761773 Intergenic 6 384 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10949808 chr7 156048649 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 7.0 SHH - NCRNA00244 FUNCTIONAL_SNP rs7780536 chr7 156043964 Intergenic 7 4685 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs6966038 chr7 156880398 Intergenic 7 ASSOCIATION 19846067 Response to citalopram treatment 6.39794000867 MNX1 - UBE3C ASSOCIATION 19846067 Response to citalopram treatment 6.30102999566 MNX1 - UBE3C LEAD_SNP rs2527866 chr7 157090296 Intergenic 6 ASSOCIATION 19197348 Quantitative traits 5.52287874528 RPL36AP30 - DNAJB6 LEAD_SNP rs10227331 chr7 157294938 Intron 5b ASSOCIATION 18821565 Inattentive symptoms 5.39794000867 DNAJB6 - PTPRN2 LEAD_SNP rs6459804 chr7 157510195 Intron 5b ASSOCIATION 21057379 Bipolar disorder and schizophrenia 5.09691001301 PTPRN2 FUNCTIONAL_SNP rs10233396 chr7 157512290 Intron 5b 2095 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:0.953;0.669 FUNCTIONAL_SNP rs6459805 chr7 157510294 Intron 5b 99 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;1.0 FUNCTIONAL_SNP rs6459806 chr7 157510483 Intron 5b 288 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;1.0 LEAD_SNP rs2730245 chr7 158724789 Intron 4 ASSOCIATION 18391950 Height 6.52287874528 WDR60 FUNCTIONAL_SNP rs6965685 chr7 158726462 Intron 4 1673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs2657365 chr7 158722753 Intron 5b 2036 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs2527199 chr7 158737113 Intron 5b 12324 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.965 LEAD_SNP rs17665859 chr8 445601 Intron 7 ASSOCIATION 21646302 Bilirubin levels 6.30102999566 C8orf42 FUNCTIONAL_SNP rs17065117 chr8 483218 Intron 7 37617 CEU:1.0;0.855, CHB:1.0;0.656 FUNCTIONAL_SNP rs17738513 chr8 446359 Intron 7 758 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;0.79 LEAD_SNP rs641525 chr8 2740502 Intergenic 3b ASSOCIATION 20709820 Emphysema-related traits 6.30102999566 MYOM2 - CSMD1 FUNCTIONAL_SNP rs7823974 chr8 2741015 Intergenic 6 513 CEU:1.0;1.0, CHB:1.0;0.756, JPT:1.0;0.85 FUNCTIONAL_SNP rs653754 chr8 2740941 Intergenic 6 439 CEU:1.0;1.0, CHB:1.0;0.756, JPT:1.0;0.846, YRI:1.0;1.0 LEAD_SNP rs1529316 chr8 3828138 Intron 7 ASSOCIATION 19010793 Multiple sclerosis 5.69897000434 CSMD1 LEAD_SNP rs4875320 chr8 4164013 Intron 7 ASSOCIATION 21347282 Coronary heart disease 5.22184874962 CSMD1 LEAD_SNP rs2616984 chr8 4483141 Intron 7 ASSOCIATION 20125193 Cognitive test performance 5.39794000867 CSMD1 LEAD_SNP rs1454292 chr8 4926465 Intergenic 7 ASSOCIATION 19896111 Hair morphology 5.09691001301 RSL24D1P7 FUNCTIONAL_SNP rs1975734 chr8 4930997 Intergenic 6 4532 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.852 FUNCTIONAL_SNP rs12547271 chr8 4929896 Intergenic 6 3431 CEU:1.0;0.819, JPT:1.0;0.929, YRI:1.0;0.896 FUNCTIONAL_SNP rs7007826 chr8 4931911 Intergenic 7 5446 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;0.932, YRI:1.0;0.793 FUNCTIONAL_SNP rs1454296 chr8 4931385 Intergenic 7 4920 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs1454297 chr8 4931525 Intergenic 7 5060 CEU:1.0;0.912, JPT:0.927;0.86, YRI:1.0;0.952 FUNCTIONAL_SNP rs1377888 chr8 4927142 Intergenic 7 677 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 LEAD_SNP rs4875598 chr8 5461753 Intergenic 4 ASSOCIATION 18846501 Attention deficit hyperactivity disorder symptoms (interaction) 5.04575749056 RPL23AP54 - MCPH1 LEAD_SNP rs2738113 chr8 6829085 Intergenic 6 ASSOCIATION 21151130 Endometriosis 6.52287874528 DEFA10P - DEFA1 LEAD_SNP rs332034 chr8 8717007 Intron 7 ASSOCIATION 18846501 Conduct disorder (interaction) 5.22184874962 MFHAS1 LEAD_SNP rs9987289 chr8 9183358 Intron 7 ASSOCIATION 21386085 HDL Cholesterol - Triglycerides (HDLC-TG) 8.0 PPP1R3B - TNKS ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 7.39794000867 PPP1R3B - TNKS ASSOCIATION 21300955 C-reactive protein 12.5228787453 PPP1R3B - TNKS FUNCTIONAL_SNP rs4841132 chr8 9183596 Exon,non-coding 6 238 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.646 FUNCTIONAL_SNP rs4841133 chr8 9183664 Exon,non-coding 6 306 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11783641 chr8 9221207 Intergenic 4 37849 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11779870 chr8 9211723 Intron 6 28365 CEU:1.0;0.88, CHB:1.0;1.0 FUNCTIONAL_SNP rs4332138 chr8 9200251 Intergenic 6 16893 CEU:1.0;0.866, CHB:1.0;0.659 FUNCTIONAL_SNP rs4240624 chr8 9184231 Intron 7 873 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2126259 chr8 9185146 Intron 7 1788 CEU:1.0;0.866, CHB:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs6601299 chr8 9184691 Intron 7 1333 CEU:1.0;0.848, CHB:1.0;1.0, YRI:1.0;0.653 FUNCTIONAL_SNP rs1461729 chr8 9187242 Intron 7 3884 CEU:1.0;0.866, CHB:1.0;1.0, YRI:0.912;0.581 FUNCTIONAL_SNP rs11782386 chr8 9201787 Intergenic 7 18429 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs6601299 chr8 9184691 Intron 7 ASSOCIATION 21347282 Coronary heart disease 8.0 PPP1R3B - TNKS LEAD_SNP rs2126259 chr8 9185146 Intron 7 ASSOCIATION 20864672 LDL cholesterol 11.15490196 PPP1R3B - TNKS FUNCTIONAL_SNP rs11781511 chr8 9192423 Exon,non-coding 5b 7277 CEU:1.0;0.879, CHB:1.0;1.0, YRI:0.929;0.807 FUNCTIONAL_SNP rs4841132 chr8 9183596 Exon,non-coding 6 1550 CEU:1.0;0.866, CHB:1.0;1.0, YRI:1.0;0.685 FUNCTIONAL_SNP rs4841133 chr8 9183664 Exon,non-coding 6 1482 CEU:1.0;0.866, CHB:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs11783641 chr8 9221207 Intergenic 4 36061 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11779870 chr8 9211723 Intron 6 26577 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs4332138 chr8 9200251 Intergenic 6 15105 CEU:1.0;1.0, CHB:1.0;0.659 FUNCTIONAL_SNP rs13265179 chr8 9194694 Intergenic 7 9548 CEU:1.0;0.879, CHB:1.0;1.0 FUNCTIONAL_SNP rs4240624 chr8 9184231 Intron 7 915 CEU:1.0;0.866, CHB:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs7357361 chr8 9220139 Intergenic 7 34993 CEU:1.0;0.879, CHB:1.0;1.0 FUNCTIONAL_SNP rs2054345 chr8 9199305 Intergenic 7 14159 CEU:1.0;0.866 FUNCTIONAL_SNP rs6601299 chr8 9184691 Intron 7 455 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs9987289 chr8 9183358 Intron 7 1788 CEU:1.0;0.866, CHB:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs1461729 chr8 9187242 Intron 7 2096 CEU:1.0;1.0, CHB:1.0;1.0, YRI:0.914;0.622 FUNCTIONAL_SNP rs11782386 chr8 9201787 Intergenic 7 16641 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs7017212 chr8 10022938 Intron 7 ASSOCIATION 21679298 Schizophrenia 5.39794000867 MSRA LEAD_SNP rs11775334 chr8 10071620 Intron 7 ASSOCIATION 19430479 Hypertension 5.39794000867 MSRA LEAD_SNP rs11782819 chr8 10334781 Exon,non-coding 7 ASSOCIATION 20452100 Alzheimer's disease 5.52287874528 MSRA - PRSS55 LEAD_SNP rs7819412 chr8 11045161 Intron 6 ASSOCIATION 19060906 Triglycerides 7.52287874528 XKR6 LEAD_SNP rs7824557 chr8 11104111 Intergenic 6 ASSOCIATION 21060863 Retinal vascular caliber 6.39794000867 RPL17P29 - RPL19P13 FUNCTIONAL_SNP rs2164272 chr8 11162496 Coding 7 58385 CEU:0.916;0.806 FUNCTIONAL_SNP rs6991606 chr8 11176159 Exon,non-coding 7 72048 CEU:0.916;0.806 FUNCTIONAL_SNP rs2736372 chr8 11106041 Intron 3a 1930 CEU:1.0;0.923, CHB:0.95;0.902, JPT:0.944;0.736 FUNCTIONAL_SNP rs17797443 chr8 11164012 Intron 5a 59901 CEU:0.916;0.806 FUNCTIONAL_SNP rs2099456 chr8 11127001 Intergenic 5b 22890 CEU:0.917;0.807 FUNCTIONAL_SNP rs2572417 chr8 11111462 Intron 6 7351 CEU:1.0;0.96 FUNCTIONAL_SNP rs2572431 chr8 11105077 Intergenic 6 966 CEU:1.0;0.96, CHB:1.0;0.953, JPT:0.941;0.664 FUNCTIONAL_SNP rs958648 chr8 11103895 Intergenic 6 216 CEU:1.0;0.96, CHB:0.951;0.905, JPT:1.0;0.787 FUNCTIONAL_SNP rs2736371 chr8 11105529 Intron 6 1418 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.952, YRI:1.0;0.719 FUNCTIONAL_SNP rs765731 chr8 11121498 Intron 6 17387 CEU:0.918;0.843, YRI:0.904;0.686 FUNCTIONAL_SNP rs2572430 chr8 11105304 Intron 6 1193 CEU:1.0;0.923, CHB:1.0;0.953, JPT:0.944;0.736 FUNCTIONAL_SNP rs6601577 chr8 11102682 Intergenic 6 1429 CEU:1.0;0.852, CHB:1.0;0.753, JPT:1.0;0.682 FUNCTIONAL_SNP rs6985460 chr8 11171087 Intron 6 66976 CEU:0.916;0.806 FUNCTIONAL_SNP rs6985146 chr8 11170721 Intron 6 66610 CEU:0.916;0.806 FUNCTIONAL_SNP rs1897950 chr8 11169551 Intron 6 65440 CEU:0.914;0.802 FUNCTIONAL_SNP rs4568582 chr8 11160495 Intron 7 56384 CEU:0.913;0.8 FUNCTIONAL_SNP rs2164273 chr8 11168499 Intron 7 64388 CEU:0.916;0.806 FUNCTIONAL_SNP rs2572418 chr8 11113089 Intron 7 8978 CEU:1.0;0.96 FUNCTIONAL_SNP rs2060465 chr8 11162609 Intron 7 58498 CEU:0.916;0.806 FUNCTIONAL_SNP rs3808509 chr8 11163256 Intron 7 59145 CEU:0.916;0.806 FUNCTIONAL_SNP rs3808513 chr8 11157460 Intron 7 53349 CEU:0.916;0.806 FUNCTIONAL_SNP rs10098488 chr8 11130977 Intergenic 7 26866 CEU:0.957;0.846 FUNCTIONAL_SNP rs1347410 chr8 11111242 Intron 7 7131 CEU:1.0;0.96 FUNCTIONAL_SNP rs6601576 chr8 11100275 Intergenic 7 3836 CEU:1.0;0.887, CHB:1.0;0.719, JPT:1.0;0.676, YRI:1.0;0.9 LEAD_SNP rs2251301 chr8 11119037 Intron 5b ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 6.0 RPL19P13 - MTMR9 LEAD_SNP rs2002030 chr8 11276542 Intron 5b ASSOCIATION 20125193 Cognitive test performance 5.30102999566 C8orf12 LEAD_SNP rs7812879 chr8 11340181 Intergenic 6 ASSOCIATION 19838193 Systemic lupus erythematosus 23.6989700043 FAM167A - BLK LEAD_SNP rs2736340 chr8 11343973 Intergenic 6 ASSOCIATION 21408207 Systemic lupus erythematosus 6.52287874528 FAM167A - BLK ASSOCIATION 19503088 Rheumatoid arthritis 8.22184874962 FAM167A - BLK FUNCTIONAL_SNP rs922483 chr8 11351912 Exon,non-coding 4 7939 CEU:1.0;0.866, CHB:0.94;0.883, JPT:1.0;0.951 FUNCTIONAL_SNP rs4840568 chr8 11351019 Intergenic 2b 7046 CEU:1.0;0.867, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs13277113 chr8 11349186 Intergenic 3a 5213 CEU:1.0;0.951, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2618476 chr8 11352541 Intron 3a 8568 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2736345 chr8 11352485 Intron 4 8512 CEU:1.0;0.861, CHB:1.0;0.941, JPT:1.0;0.947 FUNCTIONAL_SNP rs998683 chr8 11353000 Intron 5a 9027 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4840565 chr8 11345545 Intergenic 6 1572 CEU:0.95;0.859, CHB:1.0;0.942, JPT:1.0;0.949 FUNCTIONAL_SNP rs2618473 chr8 11344127 Intergenic 6 154 CEU:0.948;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1478901 chr8 11347833 Intergenic 6 3860 CEU:1.0;0.95, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13277113 chr8 11349186 Intergenic 3a ASSOCIATION 18204098 Systemic lupus erythematosus 10.0 FAM167A - BLK FUNCTIONAL_SNP rs2618476 chr8 11352541 Intron 3a 3355 CEU:1.0;0.951, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs998683 chr8 11353000 Intron 5a 3814 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2736340 chr8 11343973 Intergenic 6 5213 CEU:1.0;0.951, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1478901 chr8 11347833 Intergenic 6 1353 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2618476 chr8 11352541 Intron 3a ASSOCIATION 19165918 Systemic lupus erythematosus 7.69897000434 BLK FUNCTIONAL_SNP rs13277113 chr8 11349186 Intergenic 3a 3355 CEU:1.0;0.951, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs998683 chr8 11353000 Intron 5a 459 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2736340 chr8 11343973 Intergenic 6 8568 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1478901 chr8 11347833 Intergenic 6 4708 CEU:1.0;0.953, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1600249 chr8 11359638 Intron 5b ASSOCIATION 21452313 Rheumatoid arthritis 5.30102999566 BLK ASSOCIATION 21452313 Rheumatoid arthritis 5.30102999566 BLK LEAD_SNP rs6601606 chr8 11638244 Intron 5b ASSOCIATION 21507922 Neutrophil count 6.0 NEIL2 LEAD_SNP rs2645424 chr8 11684463 Intron 5a ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 5.52287874528 FDFT1 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 6.15490195999 FDFT1 FUNCTIONAL_SNP rs962366 chr8 11684403 Intron 4 60 CEU:1.0;1.0, CHB:1.0;0.754, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs7015547 chr8 11678668 Intron 7 5795 CEU:0.956;0.915, CHB:0.93;0.762, JPT:1.0;0.927 LEAD_SNP rs4831837 chr8 12711863 Intergenic 7 ASSOCIATION 17903295 Morbidity-free survival 6.30102999566 LONRF1 - C8orf79 LEAD_SNP rs1903595 chr8 14389481 Intron 7 ASSOCIATION 20526338 Platelet aggregation 5.30102999566 SGCZ FUNCTIONAL_SNP rs13265072 chr8 14423424 Intron 5b 33943 CEU:1.0;0.878, CHB:1.0;0.846, JPT:1.0;0.823 FUNCTIONAL_SNP rs1381409 chr8 14390979 Intron 6 1498 CEU:1.0;0.913 FUNCTIONAL_SNP rs4831606 chr8 14421587 Intron 6 32106 CEU:1.0;0.903, CHB:1.0;0.788, JPT:1.0;0.787 FUNCTIONAL_SNP rs11203624 chr8 14398365 Intron 7 8884 CEU:1.0;0.842, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10097996 chr8 14391604 Intron 7 2123 CEU:1.0;0.808 FUNCTIONAL_SNP rs1903594 chr8 14389555 Intron 7 74 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs3793427 chr8 17143830 Intron 7 ASSOCIATION 17903302 Tonometry 5.69897000434 VPS37A LEAD_SNP rs2720508 chr8 17329827 Intergenic 7 ASSOCIATION 20585324 Conduct disorder (case status) 5.15490195999 ADAM24P - SLC7A2 LEAD_SNP rs17126232 chr8 17977650 Intergenic 7 ASSOCIATION 21552555 Obesity 6.39794000867 MRPS18CP3 - NAT1 ASSOCIATION 21552555 Obesity 6.69897000434 MRPS18CP3 - NAT1 ASSOCIATION 21552555 Obesity 7.09691001301 MRPS18CP3 - NAT1 FUNCTIONAL_SNP rs1858720 chr8 17977230 Intergenic 7 420 CEU:1.0;0.847 FUNCTIONAL_SNP rs17126237 chr8 17981089 Intergenic 7 3439 CEU:1.0;1.0 LEAD_SNP rs4921914 chr8 18272438 Intergenic 6 ASSOCIATION 21572414 Urinary metabolites 28.0 NAT2 - PSD3 FUNCTIONAL_SNP rs1495741 chr8 18272881 Intergenic 6 443 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs1495743 chr8 18273300 Intergenic 6 862 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs7816847 chr8 18275189 Intergenic 7 2751 CEU:1.0;0.836, CHB:0.943;0.73, JPT:1.0;0.577 FUNCTIONAL_SNP rs4921913 chr8 18272377 Intergenic 7 61 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4921915 chr8 18272466 Intergenic 7 28 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1495741 chr8 18272881 Intergenic 6 ASSOCIATION 20972438 Bladder cancer 10.3979400087 NAT2 - PSD3 FUNCTIONAL_SNP rs4921914 chr8 18272438 Intergenic 6 443 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs1495743 chr8 18273300 Intergenic 6 419 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7816847 chr8 18275189 Intergenic 7 2308 CEU:1.0;0.836, CHB:1.0;0.782, JPT:1.0;0.547 FUNCTIONAL_SNP rs4921913 chr8 18272377 Intergenic 7 504 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs4921915 chr8 18272466 Intergenic 7 415 CEU:1.0;1.0, CHB:0.95;0.902, JPT:1.0;0.95, YRI:1.0;1.0 LEAD_SNP rs4921617 chr8 18782047 Exon,non-coding 5b ASSOCIATION 21507922 Neutrophil count 5.39794000867 PSD3 LEAD_SNP rs7816032 chr8 19786891 Intergenic 5b ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.69897000434 INTS10 - LPL FUNCTIONAL_SNP rs28834434 chr8 19774890 Intergenic 7 12001 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.854 LEAD_SNP rs295 chr8 19816238 Intron 7 ASSOCIATION 21386085 Metabolic syndrome 8.69897000434 LPL FUNCTIONAL_SNP rs13702 chr8 19824492 Exon,non-coding 6 8254 CEU:0.944;0.801 FUNCTIONAL_SNP rs15285 chr8 19824667 Exon,non-coding 7 8429 CEU:0.944;0.801 FUNCTIONAL_SNP rs326 chr8 19819439 Intron 5a 3201 CEU:0.944;0.801 FUNCTIONAL_SNP rs765548 chr8 19866594 Intergenic 5a 50356 CEU:1.0;0.906 FUNCTIONAL_SNP rs1837842 chr8 19868290 Intergenic 5b 52052 CEU:1.0;0.899 FUNCTIONAL_SNP rs2083637 chr8 19865175 Intergenic 5b 48937 CEU:1.0;0.899 FUNCTIONAL_SNP rs331 chr8 19820405 Intron 5b 4167 CEU:0.945;0.846 FUNCTIONAL_SNP rs17411031 chr8 19852310 Intergenic 5b 36072 CEU:1.0;0.899 FUNCTIONAL_SNP rs17411045 chr8 19852362 Intergenic 5b 36124 CEU:1.0;0.899 FUNCTIONAL_SNP rs3916027 chr8 19824868 Intergenic 5b 8630 CEU:0.943;0.8 FUNCTIONAL_SNP rs1919484 chr8 19869676 Intergenic 5b 53438 CEU:1.0;0.899 FUNCTIONAL_SNP rs17489282 chr8 19852518 Intergenic 6 36280 CEU:1.0;0.899 FUNCTIONAL_SNP rs4922117 chr8 19852586 Intergenic 6 36348 CEU:1.0;0.899 FUNCTIONAL_SNP rs2119690 chr8 19859539 Intergenic 6 43301 CEU:1.0;0.864 FUNCTIONAL_SNP rs2165556 chr8 19859627 Intergenic 6 43389 CEU:1.0;0.906 FUNCTIONAL_SNP rs17411126 chr8 19855272 Intergenic 6 39034 CEU:1.0;0.899 FUNCTIONAL_SNP rs327 chr8 19819536 Intron 6 3298 CEU:1.0;0.899 FUNCTIONAL_SNP rs1441762 chr8 19864687 Intergenic 6 48449 CEU:1.0;0.906 FUNCTIONAL_SNP rs17489268 chr8 19852045 Intergenic 6 35807 CEU:1.0;0.899 FUNCTIONAL_SNP rs765547 chr8 19866274 Intergenic 6 50036 CEU:1.0;0.899 FUNCTIONAL_SNP rs11986942 chr8 19867445 Intergenic 6 51207 CEU:1.0;0.813 FUNCTIONAL_SNP rs894211 chr8 19865747 Intergenic 7 49509 CEU:0.948;0.814 FUNCTIONAL_SNP rs2119689 chr8 19863507 Intergenic 7 47269 CEU:1.0;0.899 FUNCTIONAL_SNP rs2103325 chr8 19858343 Intergenic 7 42105 CEU:0.942;0.838 FUNCTIONAL_SNP rs291 chr8 19815852 Intron 7 386 CEU:1.0;1.0 FUNCTIONAL_SNP rs297 chr8 19816371 Intron 7 133 CEU:1.0;1.0 FUNCTIONAL_SNP rs301 chr8 19816934 Intron 7 696 CEU:1.0;1.0 FUNCTIONAL_SNP rs2083636 chr8 19865263 Intergenic 7 49025 CEU:1.0;0.906 FUNCTIONAL_SNP rs4406409 chr8 19868971 Intergenic 7 52733 CEU:1.0;0.824 FUNCTIONAL_SNP rs1441756 chr8 19868386 Intergenic 7 52148 CEU:1.0;0.86 FUNCTIONAL_SNP rs9644637 chr8 19867220 Intergenic 7 50982 CEU:1.0;0.864 FUNCTIONAL_SNP rs2410620 chr8 19854660 Intergenic 7 38422 CEU:1.0;0.903 FUNCTIONAL_SNP rs1581675 chr8 19858499 Intergenic 7 42261 CEU:0.939;0.83 FUNCTIONAL_SNP rs2410618 chr8 19853500 Intergenic 7 37262 CEU:1.0;0.906 FUNCTIONAL_SNP rs2410621 chr8 19854682 Intergenic 7 38444 CEU:1.0;0.903 FUNCTIONAL_SNP rs2410623 chr8 19854889 Intergenic 7 38651 CEU:1.0;0.906 LEAD_SNP rs301 chr8 19816934 Intron 7 ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 10.5228787453 LPL FUNCTIONAL_SNP rs13702 chr8 19824492 Exon,non-coding 6 7558 CEU:0.944;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs15285 chr8 19824667 Exon,non-coding 7 7733 CEU:0.944;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs765548 chr8 19866594 Intergenic 5a 49660 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs326 chr8 19819439 Intron 5a 2505 CEU:0.944;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3916027 chr8 19824868 Intergenic 5b 7934 CEU:0.943;0.8, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1837842 chr8 19868290 Intergenic 5b 51356 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2083637 chr8 19865175 Intergenic 5b 48241 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs331 chr8 19820405 Intron 5b 3471 CEU:0.945;0.846, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.58 FUNCTIONAL_SNP rs17411045 chr8 19852362 Intergenic 5b 35428 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411031 chr8 19852310 Intergenic 5b 35376 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1919484 chr8 19869676 Intergenic 5b 52742 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs765547 chr8 19866274 Intergenic 6 49340 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2119690 chr8 19859539 Intergenic 6 42605 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4922117 chr8 19852586 Intergenic 6 35652 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411126 chr8 19855272 Intergenic 6 38338 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11986942 chr8 19867445 Intergenic 6 50511 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2165556 chr8 19859627 Intergenic 6 42693 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs327 chr8 19819536 Intron 6 2602 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17489268 chr8 19852045 Intergenic 6 35111 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17489282 chr8 19852518 Intergenic 6 35584 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441762 chr8 19864687 Intergenic 6 47753 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2119689 chr8 19863507 Intergenic 7 46573 CEU:1.0;0.892, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2103325 chr8 19858343 Intergenic 7 41409 CEU:0.937;0.825, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9644637 chr8 19867220 Intergenic 7 50286 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1581675 chr8 19858499 Intergenic 7 41565 CEU:1.0;0.937, CHB:1.0;0.887, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410618 chr8 19853500 Intergenic 7 36566 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410620 chr8 19854660 Intergenic 7 37726 CEU:1.0;0.896, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410621 chr8 19854682 Intergenic 7 37748 CEU:1.0;0.896, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410623 chr8 19854889 Intergenic 7 37955 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4406409 chr8 19868971 Intergenic 7 52037 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs894211 chr8 19865747 Intergenic 7 48813 CEU:0.944;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs291 chr8 19815852 Intron 7 1082 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs295 chr8 19816238 Intron 7 696 CEU:1.0;1.0 FUNCTIONAL_SNP rs297 chr8 19816371 Intron 7 563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2083636 chr8 19865263 Intergenic 7 48329 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441756 chr8 19868386 Intergenic 7 51452 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs325 chr8 19819328 Intron 5a ASSOCIATION 20864672 HDL cholesterol 25.096910013 LPL FUNCTIONAL_SNP rs328 chr8 19819724 Coding 5b 396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1059611 chr8 19824563 Exon,non-coding 6 5235 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3735964 chr8 19824045 Exon,non-coding 6 4717 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7841189 chr8 19845376 Intergenic 2c 26048 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs1569209 chr8 19830170 Intergenic 5a 10842 CEU:1.0;0.913 FUNCTIONAL_SNP rs12679834 chr8 19820433 Intron 5b 1105 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs11570891 chr8 19822810 Intron 5b 3482 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;0.911, YRI:1.0;1.0 FUNCTIONAL_SNP rs6999813 chr8 19863471 Intergenic 5b 44143 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17482753 chr8 19832646 Intergenic 6 13318 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1372344 chr8 19852939 Intergenic 6 33611 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;0.779 FUNCTIONAL_SNP rs7004158 chr8 19877233 Intergenic 6 57905 CEU:1.0;1.0, CHB:0.839;0.609, JPT:1.0;1.0 FUNCTIONAL_SNP rs7007609 chr8 19876797 Intergenic 6 57469 CEU:1.0;1.0, CHB:0.839;0.609, JPT:1.0;1.0 FUNCTIONAL_SNP rs12682115 chr8 19847060 Intergenic 6 27732 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs17410962 chr8 19848080 Intergenic 6 28752 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs7016880 chr8 19876746 Intergenic 6 57418 CEU:1.0;1.0, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs7819706 chr8 19844415 Intergenic 6 25087 CEU:1.0;0.923, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs10503669 chr8 19847690 Intergenic 6 28362 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10096633 chr8 19830921 Intergenic 6 11593 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs6983430 chr8 19877253 Intergenic 7 57925 CEU:1.0;1.0, CHB:0.839;0.609, JPT:1.0;1.0 FUNCTIONAL_SNP rs12678919 chr8 19844222 Intergenic 7 24894 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs7007797 chr8 19876970 Intergenic 7 57642 CEU:1.0;1.0, CHB:0.839;0.609, JPT:1.0;1.0 FUNCTIONAL_SNP rs6993414 chr8 19902918 Intergenic 7 83590 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11991231 chr8 19907912 Intergenic 7 88584 CEU:1.0;0.923, JPT:1.0;1.0 FUNCTIONAL_SNP rs11984636 chr8 1545789 Intron 7 18273539 CEU:1.0;1.0, CHB:0.813;0.559, JPT:1.0;0.891 FUNCTIONAL_SNP rs7816447 chr8 19882950 Intergenic 7 63622 CEU:1.0;1.0, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs17091891 chr8 19843171 Intergenic 7 23843 CEU:1.0;0.923, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs11989309 chr8 19880330 Intergenic 7 61002 CEU:1.0;1.0, CHB:0.839;0.609, JPT:1.0;0.916 FUNCTIONAL_SNP rs17091905 chr8 19849757 Intergenic 7 30429 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs7004149 chr8 19877208 Intergenic 7 57880 CEU:1.0;1.0, CHB:0.839;0.609, JPT:1.0;1.0 FUNCTIONAL_SNP rs12678603 chr8 19877732 Intergenic 7 58404 CEU:1.0;1.0, CHB:0.839;0.609, JPT:1.0;1.0 FUNCTIONAL_SNP rs12678604 chr8 19877773 Intergenic 7 58445 CEU:1.0;1.0, CHB:0.839;0.609, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411024 chr8 19852134 Intergenic 7 32806 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs1011685 chr8 19830769 Intergenic 7 11441 CEU:1.0;0.918, CHB:1.0;0.864, JPT:0.905;0.691 LEAD_SNP rs326 chr8 19819439 Intron 5a ASSOCIATION 18193046 Triglycerides 11.3010299957 LPL LEAD_SNP rs328 chr8 19819724 Coding 5b ASSOCIATION 18193044 HDL cholesterol 22.0457574906 LPL ASSOCIATION 18193044 Triglycerides 27.6989700043 LPL ASSOCIATION 17463246 Triglycerides 6.30102999566 LPL FUNCTIONAL_SNP rs3735964 chr8 19824045 Exon,non-coding 6 4321 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs325 chr8 19819328 Intron 5a 396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11570891 chr8 19822810 Intron 5b 3086 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;0.911, YRI:1.0;1.0 FUNCTIONAL_SNP rs17482753 chr8 19832646 Intergenic 6 12922 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10503669 chr8 19847690 Intergenic 6 27966 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs13702 chr8 19824492 Exon,non-coding 6 ASSOCIATION 21386085 HDL Cholesterol - Triglycerides (HDLC-TG) 16.0 LPL FUNCTIONAL_SNP rs15285 chr8 19824667 Exon,non-coding 7 175 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs765548 chr8 19866594 Intergenic 5a 42102 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs320 chr8 19819077 Intron 5a 5415 CEU:0.944;0.891 FUNCTIONAL_SNP rs326 chr8 19819439 Intron 5a 5053 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.824;0.561 FUNCTIONAL_SNP rs3916027 chr8 19824868 Intergenic 5b 376 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1837842 chr8 19868290 Intergenic 5b 43798 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2083637 chr8 19865175 Intergenic 5b 40683 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs331 chr8 19820405 Intron 5b 4087 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411045 chr8 19852362 Intergenic 5b 27870 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411031 chr8 19852310 Intergenic 5b 27818 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1919484 chr8 19869676 Intergenic 5b 45184 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs765547 chr8 19866274 Intergenic 6 41782 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2119690 chr8 19859539 Intergenic 6 35047 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4922117 chr8 19852586 Intergenic 6 28094 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411126 chr8 19855272 Intergenic 6 30780 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11986942 chr8 19867445 Intergenic 6 42953 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2165556 chr8 19859627 Intergenic 6 35135 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs327 chr8 19819536 Intron 6 4956 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17489268 chr8 19852045 Intergenic 6 27553 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17489282 chr8 19852518 Intergenic 6 28026 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441762 chr8 19864687 Intergenic 6 40195 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441766 chr8 19862788 Intergenic 6 38296 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2119689 chr8 19863507 Intergenic 7 39015 CEU:0.944;0.892, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2103325 chr8 19858343 Intergenic 7 33851 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4083261 chr8 19861226 Intergenic 7 36734 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10105606 chr8 19827848 Intergenic 7 3356 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9644637 chr8 19867220 Intergenic 7 42728 CEU:0.948;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1581675 chr8 19858499 Intergenic 7 34007 CEU:1.0;0.94, CHB:1.0;0.887, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410618 chr8 19853500 Intergenic 7 29008 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410620 chr8 19854660 Intergenic 7 30168 CEU:0.947;0.896, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410621 chr8 19854682 Intergenic 7 30190 CEU:0.947;0.896, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410623 chr8 19854889 Intergenic 7 30397 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4406409 chr8 19868971 Intergenic 7 44479 CEU:0.948;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs894211 chr8 19865747 Intergenic 7 41255 CEU:0.897;0.804, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs291 chr8 19815852 Intron 7 8640 CEU:0.944;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs295 chr8 19816238 Intron 7 8254 CEU:0.944;0.801 FUNCTIONAL_SNP rs297 chr8 19816371 Intron 7 8121 CEU:0.944;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs301 chr8 19816934 Intron 7 7558 CEU:0.944;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2083636 chr8 19865263 Intergenic 7 40771 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441756 chr8 19868386 Intergenic 7 43894 CEU:0.946;0.848, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs15285 chr8 19824667 Exon,non-coding 7 ASSOCIATION 21386085 Triglycerides-Blood Pressure (TG-BP) 10.0 LPL FUNCTIONAL_SNP rs13702 chr8 19824492 Exon,non-coding 6 175 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs765548 chr8 19866594 Intergenic 5a 41927 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs320 chr8 19819077 Intron 5a 5590 CEU:0.944;0.891 FUNCTIONAL_SNP rs326 chr8 19819439 Intron 5a 5228 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.824;0.561 FUNCTIONAL_SNP rs3916027 chr8 19824868 Intergenic 5b 201 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1837842 chr8 19868290 Intergenic 5b 43623 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2083637 chr8 19865175 Intergenic 5b 40508 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs331 chr8 19820405 Intron 5b 4262 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411045 chr8 19852362 Intergenic 5b 27695 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411031 chr8 19852310 Intergenic 5b 27643 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1919484 chr8 19869676 Intergenic 5b 45009 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs765547 chr8 19866274 Intergenic 6 41607 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2119690 chr8 19859539 Intergenic 6 34872 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4922117 chr8 19852586 Intergenic 6 27919 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411126 chr8 19855272 Intergenic 6 30605 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11986942 chr8 19867445 Intergenic 6 42778 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2165556 chr8 19859627 Intergenic 6 34960 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs327 chr8 19819536 Intron 6 5131 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17489268 chr8 19852045 Intergenic 6 27378 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17489282 chr8 19852518 Intergenic 6 27851 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441762 chr8 19864687 Intergenic 6 40020 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441766 chr8 19862788 Intergenic 6 38121 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2119689 chr8 19863507 Intergenic 7 38840 CEU:0.944;0.892, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2103325 chr8 19858343 Intergenic 7 33676 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4083261 chr8 19861226 Intergenic 7 36559 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10105606 chr8 19827848 Intergenic 7 3181 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9644637 chr8 19867220 Intergenic 7 42553 CEU:0.948;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1581675 chr8 19858499 Intergenic 7 33832 CEU:1.0;0.94, CHB:1.0;0.887, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410618 chr8 19853500 Intergenic 7 28833 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410620 chr8 19854660 Intergenic 7 29993 CEU:0.947;0.896, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410621 chr8 19854682 Intergenic 7 30015 CEU:0.947;0.896, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410623 chr8 19854889 Intergenic 7 30222 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4406409 chr8 19868971 Intergenic 7 44304 CEU:0.948;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs894211 chr8 19865747 Intergenic 7 41080 CEU:0.897;0.804, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs291 chr8 19815852 Intron 7 8815 CEU:0.944;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs295 chr8 19816238 Intron 7 8429 CEU:0.944;0.801 FUNCTIONAL_SNP rs297 chr8 19816371 Intron 7 8296 CEU:0.944;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs301 chr8 19816934 Intron 7 7733 CEU:0.944;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2083636 chr8 19865263 Intergenic 7 40596 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441756 chr8 19868386 Intergenic 7 43719 CEU:0.946;0.848, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2197089 chr8 19826373 Intergenic 6 ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 8.69897000434 LPL - RPL30P9 FUNCTIONAL_SNP rs894210 chr8 19865843 Intergenic 7 39470 CEU:0.958;0.849, CHB:1.0;1.0, JPT:1.0;0.887 FUNCTIONAL_SNP rs4490856 chr8 19859120 Intergenic 7 32747 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;0.887, YRI:1.0;1.0 LEAD_SNP rs10105606 chr8 19827848 Intergenic 7 ASSOCIATION 20864672 Triglycerides 25.3979400087 LPL - RPL30P9 FUNCTIONAL_SNP rs13702 chr8 19824492 Exon,non-coding 6 3356 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs15285 chr8 19824667 Exon,non-coding 7 3181 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs326 chr8 19819439 Intron 5a 8409 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs331 chr8 19820405 Intron 5b 7443 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2119690 chr8 19859539 Intergenic 6 31691 CEU:0.948;0.815, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11986942 chr8 19867445 Intergenic 6 39597 CEU:0.95;0.86, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.898 FUNCTIONAL_SNP rs4464984 chr8 19838469 Intergenic 6 10621 CEU:0.948;0.814, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs12541912 chr8 19859791 Intergenic 6 31943 CEU:0.952;0.906, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441766 chr8 19862788 Intergenic 6 34940 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2103325 chr8 19858343 Intergenic 7 30495 CEU:1.0;0.841, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4523270 chr8 19856539 Intergenic 7 28691 CEU:0.952;0.906, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4083261 chr8 19861226 Intergenic 7 33378 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9644637 chr8 19867220 Intergenic 7 39372 CEU:0.948;0.815, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4406409 chr8 19868971 Intergenic 7 41123 CEU:0.948;0.815, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2165558 chr8 19856260 Intergenic 7 28412 CEU:0.951;0.905, CHB:1.0;0.857, JPT:1.0;1.0 LEAD_SNP rs10096633 chr8 19830921 Intergenic 6 ASSOCIATION 19060911 Triglycerides 17.6989700043 LPL - RPL30P9 ASSOCIATION 19060910 Other metabolic traits 7.30102999566 LPL - RPL30P9 LEAD_SNP rs17482753 chr8 19832646 Intergenic 6 ASSOCIATION 20031538 HDL cholesterol 10.5228787453 LPL - RPL30P9 FUNCTIONAL_SNP rs328 chr8 19819724 Coding 5b 12922 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1059611 chr8 19824563 Exon,non-coding 6 8083 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs3735964 chr8 19824045 Exon,non-coding 6 8601 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7841189 chr8 19845376 Intergenic 2c 12730 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs325 chr8 19819328 Intron 5a 13318 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1569209 chr8 19830170 Intergenic 5a 2476 CEU:1.0;0.913 FUNCTIONAL_SNP rs12679834 chr8 19820433 Intron 5b 12213 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs11570891 chr8 19822810 Intron 5b 9836 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6999813 chr8 19863471 Intergenic 5b 30825 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1372344 chr8 19852939 Intergenic 6 20293 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;0.766 FUNCTIONAL_SNP rs12682115 chr8 19847060 Intergenic 6 14414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7007609 chr8 19876797 Intergenic 6 44151 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs17410962 chr8 19848080 Intergenic 6 15434 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7016880 chr8 19876746 Intergenic 6 44100 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs7819706 chr8 19844415 Intergenic 6 11769 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10503669 chr8 19847690 Intergenic 6 15044 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10096633 chr8 19830921 Intergenic 6 1725 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7004158 chr8 19877233 Intergenic 6 44587 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs6993414 chr8 19902918 Intergenic 7 70272 CEU:1.0;1.0, CHB:0.834;0.527, JPT:1.0;1.0 FUNCTIONAL_SNP rs12678919 chr8 19844222 Intergenic 7 11576 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs7007797 chr8 19876970 Intergenic 7 44324 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs11991231 chr8 19907912 Intergenic 7 75266 CEU:1.0;0.918, CHB:0.834;0.527, JPT:1.0;1.0 FUNCTIONAL_SNP rs11984636 chr8 1545789 Intron 7 18286857 CEU:1.0;1.0, CHB:0.817;0.667, JPT:1.0;0.882 FUNCTIONAL_SNP rs7816447 chr8 19882950 Intergenic 7 50304 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs6983430 chr8 19877253 Intergenic 7 44607 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs17091891 chr8 19843171 Intergenic 7 10525 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11989309 chr8 19880330 Intergenic 7 47684 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;0.91 FUNCTIONAL_SNP rs17091905 chr8 19849757 Intergenic 7 17111 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7004149 chr8 19877208 Intergenic 7 44562 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs12678603 chr8 19877732 Intergenic 7 45086 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs12678604 chr8 19877773 Intergenic 7 45127 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411024 chr8 19852134 Intergenic 7 19488 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1011685 chr8 19830769 Intergenic 7 1877 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;0.767 LEAD_SNP rs12678919 chr8 19844222 Intergenic 7 ASSOCIATION 19060906 HDL cholesterol 33.6989700043 LPL - RPL30P9 ASSOCIATION 19060906 Triglycerides 40.6989700043 LPL - RPL30P9 LEAD_SNP rs10503669 chr8 19847690 Intergenic 6 ASSOCIATION 18193043 HDL cholesterol 18.3979400087 LPL - RPL30P9 ASSOCIATION 18193043 Triglycerides 21.3979400087 LPL - RPL30P9 FUNCTIONAL_SNP rs328 chr8 19819724 Coding 5b 27966 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3735964 chr8 19824045 Exon,non-coding 6 23645 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs325 chr8 19819328 Intron 5a 28362 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11570891 chr8 19822810 Intron 5b 24880 CEU:1.0;0.918, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6999813 chr8 19863471 Intergenic 5b 15781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17482753 chr8 19832646 Intergenic 6 15044 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2083637 chr8 19865175 Intergenic 5b ASSOCIATION 20694148 Metabolic syndrome 9.69897000434 LPL - RPL30P9 ASSOCIATION 19060911 HDL cholesterol 17.2218487496 LPL - RPL30P9 ASSOCIATION 18454146 Waist circumference and related phenotypes 5.30102999566 LPL - RPL30P9 FUNCTIONAL_SNP rs13702 chr8 19824492 Exon,non-coding 6 40683 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs15285 chr8 19824667 Exon,non-coding 7 40508 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs765548 chr8 19866594 Intergenic 5a 1419 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs320 chr8 19819077 Intron 5a 46098 CEU:0.944;0.891 FUNCTIONAL_SNP rs326 chr8 19819439 Intron 5a 45736 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3916027 chr8 19824868 Intergenic 5b 40307 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1837842 chr8 19868290 Intergenic 5b 3115 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs331 chr8 19820405 Intron 5b 44770 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411045 chr8 19852362 Intergenic 5b 12813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.796 FUNCTIONAL_SNP rs17411031 chr8 19852310 Intergenic 5b 12865 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.796 FUNCTIONAL_SNP rs1919484 chr8 19869676 Intergenic 5b 4501 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs765547 chr8 19866274 Intergenic 6 1099 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2119690 chr8 19859539 Intergenic 6 5636 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4922117 chr8 19852586 Intergenic 6 12589 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.796 FUNCTIONAL_SNP rs17411126 chr8 19855272 Intergenic 6 9903 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.796 FUNCTIONAL_SNP rs11986942 chr8 19867445 Intergenic 6 2270 CEU:1.0;0.904, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2165556 chr8 19859627 Intergenic 6 5548 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs327 chr8 19819536 Intron 6 45639 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17489268 chr8 19852045 Intergenic 6 13130 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.796 FUNCTIONAL_SNP rs17489282 chr8 19852518 Intergenic 6 12657 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.796 FUNCTIONAL_SNP rs12541912 chr8 19859791 Intergenic 6 5384 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441762 chr8 19864687 Intergenic 6 488 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441766 chr8 19862788 Intergenic 6 2387 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2119689 chr8 19863507 Intergenic 7 1668 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2103325 chr8 19858343 Intergenic 7 6832 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4083261 chr8 19861226 Intergenic 7 3949 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9644637 chr8 19867220 Intergenic 7 2045 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1581675 chr8 19858499 Intergenic 7 6676 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410618 chr8 19853500 Intergenic 7 11675 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.796 FUNCTIONAL_SNP rs2410620 chr8 19854660 Intergenic 7 10515 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.795 FUNCTIONAL_SNP rs2410621 chr8 19854682 Intergenic 7 10493 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.788 FUNCTIONAL_SNP rs2410623 chr8 19854889 Intergenic 7 10286 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.796 FUNCTIONAL_SNP rs4406409 chr8 19868971 Intergenic 7 3796 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs894211 chr8 19865747 Intergenic 7 572 CEU:0.948;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4523270 chr8 19856539 Intergenic 7 8636 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs291 chr8 19815852 Intron 7 49323 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs295 chr8 19816238 Intron 7 48937 CEU:1.0;0.899 FUNCTIONAL_SNP rs297 chr8 19816371 Intron 7 48804 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs301 chr8 19816934 Intron 7 48241 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2165558 chr8 19856260 Intergenic 7 8915 CEU:1.0;0.86, CHB:1.0;0.857, JPT:1.0;1.0 FUNCTIONAL_SNP rs2083636 chr8 19865263 Intergenic 7 88 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441756 chr8 19868386 Intergenic 7 3211 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1441756 chr8 19868386 Intergenic 7 ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 7.52287874528 LPL - RPL30P9 FUNCTIONAL_SNP rs13702 chr8 19824492 Exon,non-coding 6 43894 CEU:0.946;0.848, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs15285 chr8 19824667 Exon,non-coding 7 43719 CEU:0.946;0.848, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs765548 chr8 19866594 Intergenic 5a 1792 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs320 chr8 19819077 Intron 5a 49309 CEU:0.942;0.888 FUNCTIONAL_SNP rs326 chr8 19819439 Intron 5a 48947 CEU:0.946;0.848, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3916027 chr8 19824868 Intergenic 5b 43518 CEU:0.945;0.847, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1837842 chr8 19868290 Intergenic 5b 96 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2083637 chr8 19865175 Intergenic 5b 3211 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs331 chr8 19820405 Intron 5b 47981 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411045 chr8 19852362 Intergenic 5b 16024 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411031 chr8 19852310 Intergenic 5b 16076 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1919484 chr8 19869676 Intergenic 5b 1290 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs765547 chr8 19866274 Intergenic 6 2112 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2119690 chr8 19859539 Intergenic 6 8847 CEU:0.951;0.905, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4922117 chr8 19852586 Intergenic 6 15800 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17411126 chr8 19855272 Intergenic 6 13114 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11986942 chr8 19867445 Intergenic 6 941 CEU:0.947;0.852, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2165556 chr8 19859627 Intergenic 6 8759 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs327 chr8 19819536 Intron 6 48850 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17489268 chr8 19852045 Intergenic 6 16341 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17489282 chr8 19852518 Intergenic 6 15868 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12541912 chr8 19859791 Intergenic 6 8595 CEU:0.946;0.809, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1441762 chr8 19864687 Intergenic 6 3699 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2119689 chr8 19863507 Intergenic 7 4879 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2103325 chr8 19858343 Intergenic 7 10043 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9644637 chr8 19867220 Intergenic 7 1166 CEU:0.951;0.905, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1581675 chr8 19858499 Intergenic 7 9887 CEU:0.938;0.829, CHB:1.0;0.887, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2410618 chr8 19853500 Intergenic 7 14886 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410620 chr8 19854660 Intergenic 7 13726 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410621 chr8 19854682 Intergenic 7 13704 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2410623 chr8 19854889 Intergenic 7 13497 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4406409 chr8 19868971 Intergenic 7 585 CEU:0.951;0.861, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4523270 chr8 19856539 Intergenic 7 11847 CEU:0.946;0.809, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs894211 chr8 19865747 Intergenic 7 2639 CEU:0.949;0.858, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs291 chr8 19815852 Intron 7 52534 CEU:1.0;0.86, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs295 chr8 19816238 Intron 7 52148 CEU:1.0;0.86 FUNCTIONAL_SNP rs297 chr8 19816371 Intron 7 52015 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs301 chr8 19816934 Intron 7 51452 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2083636 chr8 19865263 Intergenic 7 3123 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.586 FUNCTIONAL_SNP rs2165558 chr8 19856260 Intergenic 7 12126 CEU:0.946;0.808, CHB:1.0;0.857, JPT:1.0;1.0 LEAD_SNP rs7016880 chr8 19876746 Intergenic 6 ASSOCIATION 20657596 Hypertriglyceridemia 6.69897000434 LPL - RPL30P9 FUNCTIONAL_SNP rs328 chr8 19819724 Coding 5b 57022 CEU:1.0;1.0, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs1059611 chr8 19824563 Exon,non-coding 6 52183 CEU:1.0;0.918, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs3735964 chr8 19824045 Exon,non-coding 6 52701 CEU:1.0;0.918, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs7841189 chr8 19845376 Intergenic 2c 31370 CEU:1.0;0.918, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs325 chr8 19819328 Intron 5a 57418 CEU:1.0;1.0, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs1569209 chr8 19830170 Intergenic 5a 46576 CEU:1.0;0.913 FUNCTIONAL_SNP rs12679834 chr8 19820433 Intron 5b 56313 CEU:1.0;1.0, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs11570891 chr8 19822810 Intron 5b 53936 CEU:1.0;0.918, CHB:0.838;0.607, JPT:1.0;1.0 FUNCTIONAL_SNP rs6999813 chr8 19863471 Intergenic 5b 13275 CEU:1.0;1.0, CHB:0.733;0.537, JPT:1.0;1.0 FUNCTIONAL_SNP rs17482753 chr8 19832646 Intergenic 6 44100 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs1372344 chr8 19852939 Intergenic 6 23807 CEU:1.0;0.912, CHB:0.842;0.709, JPT:1.0;0.766 FUNCTIONAL_SNP rs7004158 chr8 19877233 Intergenic 6 487 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7007609 chr8 19876797 Intergenic 6 51 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12682115 chr8 19847060 Intergenic 6 29686 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs17410962 chr8 19848080 Intergenic 6 28666 CEU:1.0;0.918, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs7819706 chr8 19844415 Intergenic 6 32331 CEU:1.0;0.918, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs10503669 chr8 19847690 Intergenic 6 29056 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs10096633 chr8 19830921 Intergenic 6 45825 CEU:1.0;0.918, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs6983430 chr8 19877253 Intergenic 7 507 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12678919 chr8 19844222 Intergenic 7 32524 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs7007797 chr8 19876970 Intergenic 7 224 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6993414 chr8 19902918 Intergenic 7 26172 CEU:1.0;1.0, CHB:1.0;0.758, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs11991231 chr8 19907912 Intergenic 7 31166 CEU:1.0;0.918, CHB:1.0;0.758, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs11984636 chr8 1545789 Intron 7 18330957 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.882, YRI:1.0;1.0 FUNCTIONAL_SNP rs7816447 chr8 19882950 Intergenic 7 6204 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17091891 chr8 19843171 Intergenic 7 33575 CEU:1.0;0.918, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs11989309 chr8 19880330 Intergenic 7 3584 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs17091905 chr8 19849757 Intergenic 7 26989 CEU:1.0;0.918, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs7004149 chr8 19877208 Intergenic 7 462 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12678603 chr8 19877732 Intergenic 7 986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12678604 chr8 19877773 Intergenic 7 1027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17411024 chr8 19852134 Intergenic 7 24612 CEU:1.0;0.918, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs1011685 chr8 19830769 Intergenic 7 45977 CEU:1.0;0.912, CHB:0.842;0.71, JPT:1.0;0.767 LEAD_SNP rs1106634 chr8 20066049 Intron 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.39794000867 ATP6V1B2 ASSOCIATION 20038947 Major depressive disorder (broad) 6.15490195999 ATP6V1B2 FUNCTIONAL_SNP rs6586899 chr8 20058757 Intron 5a 7292 CEU:1.0;0.93, CHB:1.0;0.811, JPT:1.0;0.941 LEAD_SNP rs17581368 chr8 21662445 Intron 7 ASSOCIATION 21116278 Entorhinal cortical thickness 5.15490195999 OR6R2P - DOK2 LEAD_SNP rs7843479 chr8 21820813 Intron 7 ASSOCIATION 20139978 Hematological and biochemical traits 7.52287874528 XPO7 FUNCTIONAL_SNP rs2306641 chr8 21833965 Coding 5b 13152 CEU:1.0;0.958, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs1564305 chr8 21803816 Intron 6 16997 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.856 FUNCTIONAL_SNP rs1484162 chr8 21831385 Intron 7 10572 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs13278159 chr8 21799737 Intron 7 21076 CEU:1.0;0.959, CHB:1.0;0.905, JPT:1.0;0.81, YRI:1.0;0.904 FUNCTIONAL_SNP rs1809498 chr8 21836384 Intron 7 15571 CEU:1.0;0.813, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs9314269 chr8 21804989 Intron 7 15824 CEU:1.0;0.92, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs733543 chr8 21835465 Intron 7 14652 CEU:1.0;0.92, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs11135763 chr8 21813962 Intron 7 6851 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2291317 chr8 21827162 Intron 7 6349 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11135741 chr8 21801091 Intron 7 19722 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.947, YRI:0.951;0.904 LEAD_SNP rs4872511 chr8 22400989 Exon,non-coding 7 ASSOCIATION 20205591 HIV-1 control 5.04575749056 PPP3CC - SORBS3 LEAD_SNP rs2280890 chr8 22404840 Intergenic 7 ASSOCIATION 20205591 HIV-1 control 5.04575749056 PPP3CC - SORBS3 LEAD_SNP rs1512268 chr8 23526463 Intergenic 5a ASSOCIATION 20676098 Prostate cancer 10.3979400087 SLC25A37 - NKX3-1 ASSOCIATION 19767753 Prostate cancer 29.5228787453 SLC25A37 - NKX3-1 FUNCTIONAL_SNP rs1567669 chr8 23538533 Exon,non-coding 5b 12070 CEU:1.0;0.878, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.631 FUNCTIONAL_SNP rs1398240 chr8 23501606 Intergenic 4 24857 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.77, YRI:1.0;0.608 FUNCTIONAL_SNP rs1160267 chr8 23529521 Intergenic 5a 3058 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.522 FUNCTIONAL_SNP rs13256300 chr8 23502588 Intergenic 5a 23875 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.77, YRI:1.0;0.608 FUNCTIONAL_SNP rs1606303 chr8 23524744 Intergenic 5b 1719 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.81, YRI:1.0;1.0 FUNCTIONAL_SNP rs11773905 chr8 23511163 Intergenic 5b 15300 CEU:1.0;0.803, CHB:1.0;1.0, JPT:1.0;0.77 FUNCTIONAL_SNP rs4872175 chr8 23534802 Intergenic 5b 8339 CEU:1.0;0.958, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.551 FUNCTIONAL_SNP rs7835802 chr8 23495136 Intergenic 6 31327 CEU:0.956;0.876, CHB:1.0;1.0, JPT:1.0;0.77 FUNCTIONAL_SNP rs4872172 chr8 23514343 Intergenic 6 12120 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.81, YRI:1.0;0.923 FUNCTIONAL_SNP rs7831442 chr8 23512136 Intergenic 6 14327 CEU:1.0;0.819, CHB:1.0;1.0, JPT:1.0;0.726 FUNCTIONAL_SNP rs11782388 chr8 23525358 Intergenic 6 1105 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.522 FUNCTIONAL_SNP rs2315144 chr8 23515527 Intergenic 7 10936 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.81, YRI:1.0;0.923 FUNCTIONAL_SNP rs7821330 chr8 23522452 Intergenic 7 4011 CEU:0.957;0.917, CHB:1.0;1.0, JPT:1.0;0.805, YRI:0.956;0.876 FUNCTIONAL_SNP rs13262683 chr8 23515679 Intergenic 7 10784 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs13265330 chr8 23525543 Intergenic 7 920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1121615 chr8 23524251 Intergenic 7 2212 CEU:1.0;0.878, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1512271 chr8 23516500 Intergenic 7 9963 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs1398238 chr8 23517031 Intergenic 7 9432 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.81, YRI:1.0;0.921 FUNCTIONAL_SNP rs4242402 chr8 23513730 Intergenic 7 12733 CEU:1.0;0.803, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs4242403 chr8 23514185 Intergenic 7 12278 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs995432 chr8 23522851 Intergenic 7 3612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.81, YRI:1.0;0.923 FUNCTIONAL_SNP rs4872171 chr8 23514289 Intergenic 7 12174 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs4872174 chr8 23525211 Intergenic 7 1252 CEU:1.0;0.878, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.79 LEAD_SNP rs10109414 chr8 23751151 Intergenic 7 ASSOCIATION 20383146 Chronic kidney disease 8.0 STC1 - ADAM28 FUNCTIONAL_SNP rs7007761 chr8 23719571 Intergenic 4 31580 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.932, YRI:1.0;0.953 FUNCTIONAL_SNP rs819196 chr8 23742721 Intergenic 5b 8430 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.955 FUNCTIONAL_SNP rs6999484 chr8 23728271 Intergenic 6 22880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.955 FUNCTIONAL_SNP rs11778129 chr8 23732226 Intergenic 6 18925 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.938, YRI:1.0;0.959 FUNCTIONAL_SNP rs1705699 chr8 23781453 Intergenic 6 30302 CEU:1.0;0.923, CHB:0.912;0.529, JPT:0.84;0.546, YRI:0.823;0.649 FUNCTIONAL_SNP rs3758086 chr8 23714992 Intergenic 7 36159 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.938, YRI:1.0;0.959 FUNCTIONAL_SNP rs9314273 chr8 23735559 Intergenic 7 15592 CEU:1.0;1.0, JPT:1.0;0.654, YRI:1.0;0.959 FUNCTIONAL_SNP rs1731274 chr8 23766319 Intergenic 7 15168 CEU:0.958;0.917, CHB:1.0;0.936, JPT:0.936;0.877, YRI:0.869;0.724 FUNCTIONAL_SNP rs4871905 chr8 23735047 Intergenic 7 16104 CEU:1.0;1.0, CHB:1.0;0.78, JPT:0.927;0.64, YRI:1.0;0.959 FUNCTIONAL_SNP rs1629026 chr8 23786072 Intergenic 7 34921 CEU:0.959;0.885, CHB:0.923;0.626, JPT:0.854;0.574, YRI:0.817;0.639 FUNCTIONAL_SNP rs819185 chr8 23752382 Intergenic 7 1231 CEU:0.92;0.815, CHB:1.0;0.934, JPT:1.0;0.878 FUNCTIONAL_SNP rs17786744 chr8 23777006 Intergenic 7 25855 CEU:1.0;1.0, CHB:0.92;0.557, JPT:0.854;0.574, YRI:0.823;0.649 LEAD_SNP rs17466684 chr8 27452847 Intergenic 4 ASSOCIATION 19165232 Panic disorder 6.15490195999 GULOP - CLU LEAD_SNP rs11136000 chr8 27464519 Intron 6 ASSOCIATION 19734902 Alzheimer's disease 9.04575749056 CLU FUNCTIONAL_SNP rs1532278 chr8 27466315 Intron 2b 1796 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2279590 chr8 27456253 Intron 5b 8266 CEU:1.0;0.912, CHB:1.0;0.878, JPT:0.932;0.869 FUNCTIONAL_SNP rs9331896 chr8 27467686 Intron 7 3167 CEU:0.954;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.87;0.726 LEAD_SNP rs1532278 chr8 27466315 Intron 2b ASSOCIATION 21460841 Alzheimer's disease (late onset) 7.09691001301 CLU FUNCTIONAL_SNP rs2279590 chr8 27456253 Intron 5b 10062 CEU:1.0;0.912, CHB:1.0;0.878, JPT:0.932;0.869 FUNCTIONAL_SNP rs11136000 chr8 27464519 Intron 6 1796 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9331896 chr8 27467686 Intron 7 1371 CEU:0.953;0.867, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs569214 chr8 27487790 Intergenic 6 ASSOCIATION 21627779 Alzheimer's disease 7.39794000867 CLU - SCARA3 FUNCTIONAL_SNP rs499046 chr8 27482870 Intergenic 7 4920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.763 LEAD_SNP rs4732812 chr8 27923388 Intron 7 ASSOCIATION 20877300 Suicidal ideation 5.52287874528 C8orf80 LEAD_SNP rs10091038 chr8 29360305 Intergenic 5b ASSOCIATION 20339536 Response to statin therapy 7.52287874528 DUSP4 - RPL17P33 FUNCTIONAL_SNP rs4415360 chr8 29369491 Intergenic 4 9186 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.622 FUNCTIONAL_SNP rs10098962 chr8 29371024 Intergenic 4 10719 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13274558 chr8 29357789 Intergenic 4 2516 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11991416 chr8 29370855 Intergenic 4 10550 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10109103 chr8 29361659 Intergenic 5a 1354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10088728 chr8 29371374 Intergenic 5b 11069 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13281383 chr8 29371314 Intergenic 5b 11009 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4732962 chr8 29363265 Intergenic 6 2960 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.592 FUNCTIONAL_SNP rs4445269 chr8 29363220 Intergenic 7 2915 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12679976 chr8 29365363 Intergenic 7 5058 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2978263 chr8 30498859 Intron 6 ASSOCIATION 20125193 Cognitive test performance 5.09691001301 GTF2E2 FUNCTIONAL_SNP rs2978288 chr8 30442010 Intron 7 56849 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2553268 chr8 30936356 Intron 5b ASSOCIATION 17903301 Exercise treadmill test traits 5.22184874962 WRN FUNCTIONAL_SNP rs1800389 chr8 30924557 Coding 4 11799 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.905 FUNCTIONAL_SNP rs2725385 chr8 30928146 Intron 7 8210 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10503887 chr8 31633447 Intron 7 ASSOCIATION 17903296 Hip geometry 6.69897000434 NRG1 LEAD_SNP rs16879552 chr8 32411216 Intron 7 ASSOCIATION 19196962 Hirschsprung's disease 7.69897000434 NRG1 LEAD_SNP rs2439312 chr8 32412359 Intron 4 ASSOCIATION 21546767 Dialysis-related mortality 5.15490195999 NRG1 LEAD_SNP rs6990255 chr8 34126948 Intron 7 ASSOCIATION 19416921 Bipolar disorder 5.22184874962 CYCSP3 - RPL10AP3 LEAD_SNP rs6468442 chr8 37686749 Intron 2b ASSOCIATION 19448619 Menopause (age at onset) 6.52287874528 GPR124 LEAD_SNP rs7832232 chr8 38469303 Intergenic 7 ASSOCIATION 20686608 Pancreatic cancer 5.30102999566 RNF5P1 - TACC1 FUNCTIONAL_SNP rs1966887 chr8 38468811 Intergenic 5b 492 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs189792 chr8 38468866 Intergenic 5b 437 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.925 LEAD_SNP rs11786458 chr8 40252701 Intron 7 ASSOCIATION 18821565 Inattentive symptoms 5.04575749056 C8orf4 - ZMAT4 LEAD_SNP rs2722425 chr8 40484239 Intron 7 ASSOCIATION 17903298 Fasting plasma glucose 5.04575749056 ZMAT4 ASSOCIATION 17903298 Fasting plasma glucose 7.69897000434 ZMAT4 LEAD_SNP rs6474359 chr8 41549194 Intron 5b ASSOCIATION 20858683 Glycated hemoglobin levels 8.0 ANK1 LEAD_SNP rs4737009 chr8 41630405 Intron 4 ASSOCIATION 20858683 Glycated hemoglobin levels 11.2218487496 ANK1 LEAD_SNP rs6474412 chr8 42550498 Intergenic 6 ASSOCIATION 20418888 Smoking behavior 8.0 C8orf40 - CHRNB3 FUNCTIONAL_SNP rs4950 chr8 42552633 Exon,non-coding 7 2135 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs13280604 chr8 42559586 Exon,non-coding 4 9088 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs1530848 chr8 42552908 Intron 4 2410 CEU:1.0;1.0, CHB:1.0;0.867, JPT:1.0;1.0 FUNCTIONAL_SNP rs6474413 chr8 42551064 Intergenic 5b 566 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs7004381 chr8 42551161 Intergenic 5b 663 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.788 FUNCTIONAL_SNP rs1530847 chr8 42548239 Intergenic 5b 2259 CEU:1.0;0.811, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs10958725 chr8 42524584 Intergenic 6 25914 CEU:1.0;0.932, CHB:0.923;0.699, JPT:1.0;0.829, YRI:1.0;0.725 FUNCTIONAL_SNP rs6990603 chr8 42523039 Intergenic 6 27459 CEU:1.0;0.879, CHB:1.0;0.933, JPT:1.0;1.0, YRI:0.953;0.663 FUNCTIONAL_SNP rs6997909 chr8 42560249 Intron 6 9751 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs13273442 chr8 42544017 Intergenic 6 6481 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.788 FUNCTIONAL_SNP rs1451240 chr8 42546711 Intergenic 6 3787 CEU:1.0;0.938, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4236926 chr8 42578059 Intron 6 27561 CEU:0.919;0.845, CHB:0.909;0.758, JPT:1.0;1.0 FUNCTIONAL_SNP rs1979140 chr8 42530836 Intergenic 7 19662 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:0.953;0.686 FUNCTIONAL_SNP rs10958726 chr8 42535909 Intergenic 7 14589 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:0.955;0.747 FUNCTIONAL_SNP rs6474415 chr8 42562938 Intron 7 12440 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs6474414 chr8 42560336 Intron 7 9838 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs4736835 chr8 42547033 Intergenic 7 3465 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16891561 chr8 42579739 Intron 7 29241 CEU:0.938;0.879, CHB:0.929;0.808, JPT:1.0;1.0 FUNCTIONAL_SNP rs5005909 chr8 42528667 Intergenic 7 21831 CEU:1.0;0.873, CHB:0.925;0.704, JPT:1.0;0.885, YRI:0.951;0.863 FUNCTIONAL_SNP rs1451239 chr8 42546542 Intergenic 7 3956 CEU:1.0;0.938, CHB:0.913;0.667, JPT:1.0;1.0 FUNCTIONAL_SNP rs7837296 chr8 42526894 Intergenic 7 23604 CEU:1.0;0.879, CHB:1.0;0.93, JPT:1.0;1.0 FUNCTIONAL_SNP rs1955185 chr8 42549647 Intergenic 7 851 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs7842601 chr8 42537055 Intergenic 7 13443 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:0.955;0.747 LEAD_SNP rs12155623 chr8 49812201 Intergenic 5b ASSOCIATION 21658281 Sudden cardiac arrest 6.52287874528 EFCAB1 - SNAI2 FUNCTIONAL_SNP rs16939055 chr8 49824013 Intergenic 5b 11812 CEU:0.915;0.804, YRI:1.0;1.0 LEAD_SNP rs310558 chr8 51412591 Intron 7 ASSOCIATION 17903307 Pulmonary function traits (other) 5.30102999566 SNTG1 FUNCTIONAL_SNP rs2128000 chr8 51408356 Intron 4 4235 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1114808 chr8 51418398 Intron 6 5807 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11781401 chr8 51378910 Intron 6 33681 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.927 FUNCTIONAL_SNP rs7827319 chr8 51386151 Intron 6 26440 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.896, YRI:1.0;0.964 FUNCTIONAL_SNP rs4442158 chr8 51379923 Intron 7 32668 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1904997 chr8 51379325 Intron 7 33266 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2467205 chr8 51426748 Intron 7 14157 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7821565 chr8 52216762 Intron 6 ASSOCIATION 20694014 Tuberculosis 5.09691001301 CYCSP22 - PXDNL FUNCTIONAL_SNP rs4873533 chr8 52185407 Intron 5b 31355 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4873534 chr8 52188213 Intron 5b 28549 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6981074 chr8 52185637 Intron 5b 31125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16915972 chr8 52195089 Intron 6 21673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.806 FUNCTIONAL_SNP rs7844531 chr8 52219631 Intron 6 2869 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs16915954 chr8 52189472 Intron 6 27290 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs7844947 chr8 52181920 Intron 7 34842 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10097749 chr8 52184121 Intron 7 32641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6986651 chr8 52219117 Intron 7 2355 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.877, YRI:1.0;1.0 LEAD_SNP rs10958369 chr8 54410208 Intergenic 6 ASSOCIATION 21659360 Response to antineoplastic agents 5.69897000434 OPRK1 - RPL21P79 FUNCTIONAL_SNP rs10095702 chr8 54436111 Exon,non-coding 7 25903 CEU:1.0;0.858 FUNCTIONAL_SNP rs7829521 chr8 54433888 Intron 3a 23680 CEU:1.0;0.851 FUNCTIONAL_SNP rs755372 chr8 54405380 Intergenic 3a 4828 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2068035 chr8 54414255 Intergenic 4 4047 CEU:1.0;1.0, JPT:1.0;0.636 FUNCTIONAL_SNP rs2376145 chr8 54399343 Intergenic 4 10865 CEU:1.0;0.858, JPT:1.0;0.653 FUNCTIONAL_SNP rs7812717 chr8 54433922 Intron 4 23714 CEU:1.0;0.858 FUNCTIONAL_SNP rs1904072 chr8 54439902 Intergenic 7 29694 CEU:1.0;0.805 FUNCTIONAL_SNP rs11781325 chr8 54412679 Intergenic 7 2471 CEU:1.0;1.0, JPT:1.0;0.613 LEAD_SNP rs1504749 chr8 55310711 Intergenic 5b ASSOCIATION 20364137 Intracranial aneurysm 6.30102999566 RNU105C - SOX17 FUNCTIONAL_SNP rs12542212 chr8 55326450 Intergenic 5b 15739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.938;0.879, YRI:0.924;0.793 FUNCTIONAL_SNP rs7814217 chr8 55325072 Intergenic 5b 14361 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.938;0.879, YRI:0.963;0.928 FUNCTIONAL_SNP rs6473930 chr8 55325567 Intergenic 6 14856 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.935;0.873, YRI:0.963;0.893 FUNCTIONAL_SNP rs6473929 chr8 55325503 Intergenic 7 14792 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.938;0.879, YRI:0.963;0.893 FUNCTIONAL_SNP rs12543968 chr8 55324342 Intergenic 7 13631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.938;0.879, YRI:0.962;0.925 FUNCTIONAL_SNP rs16920166 chr8 55311231 Intergenic 7 520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.582 FUNCTIONAL_SNP rs1504748 chr8 55310978 Intergenic 7 267 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.801 FUNCTIONAL_SNP rs16920187 chr8 55313162 Intergenic 7 2451 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.938;0.879, YRI:1.0;0.863 FUNCTIONAL_SNP rs12550655 chr8 55324157 Intergenic 7 13446 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.938;0.879, YRI:0.963;0.928 LEAD_SNP rs10958409 chr8 55327091 Intergenic 7 ASSOCIATION 18997786 Intracranial aneurysm 10.0 RNU105C - SOX17 FUNCTIONAL_SNP rs6986332 chr8 55309845 Intergenic 4 17246 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.927, YRI:1.0;0.573 FUNCTIONAL_SNP rs6986304 chr8 55309771 Intergenic 5a 17320 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.573 FUNCTIONAL_SNP rs4737564 chr8 55292539 Intergenic 5b 34552 CEU:0.928;0.804, CHB:0.741;0.518 FUNCTIONAL_SNP rs6987174 chr8 55327862 Intergenic 5b 771 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7009794 chr8 55309731 Intergenic 6 17360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs17306015 chr8 55288149 Intergenic 6 38942 CEU:1.0;0.93 FUNCTIONAL_SNP rs12546346 chr8 55308646 Intergenic 6 18445 CEU:0.928;0.803, CHB:0.741;0.518 FUNCTIONAL_SNP rs12548591 chr8 55306348 Intergenic 6 20743 CEU:0.928;0.803, CHB:0.741;0.518 FUNCTIONAL_SNP rs7845242 chr8 55290604 Intergenic 6 36487 CEU:0.928;0.804, CHB:0.741;0.518 FUNCTIONAL_SNP rs4737560 chr8 55289907 Intergenic 7 37184 CEU:0.928;0.804, CHB:0.741;0.518 FUNCTIONAL_SNP rs6996927 chr8 55311671 Intergenic 7 15420 CEU:1.0;0.843, YRI:0.796;0.594 FUNCTIONAL_SNP rs7840228 chr8 55304600 Intergenic 7 22491 CEU:0.928;0.804, CHB:0.741;0.518 FUNCTIONAL_SNP rs7005290 chr8 55309191 Intergenic 7 17900 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.753 LEAD_SNP rs9298506 chr8 55437524 Intergenic 5b ASSOCIATION 20364137 Intracranial aneurysm 12.0 SEC11B - RP1 ASSOCIATION 18997786 Intracranial aneurysm 8.69897000434 SEC11B - RP1 FUNCTIONAL_SNP rs10102164 chr8 55421614 Intergenic 6 15910 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs4455806 chr8 55457873 Intergenic 6 20349 CEU:1.0;0.938, CHB:1.0;0.933, JPT:1.0;0.863, YRI:0.934;0.728 FUNCTIONAL_SNP rs10104003 chr8 55422440 Intergenic 7 15084 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs10104997 chr8 55440068 Intergenic 7 2544 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs10103996 chr8 55422424 Intergenic 7 15100 CEU:1.0;0.932, CHB:1.0;0.933, JPT:1.0;0.93, YRI:1.0;1.0 LEAD_SNP rs10958476 chr8 57095808 Intron 5a ASSOCIATION 18391951 Height 7.15490195999 PLAG1 LEAD_SNP rs7833986 chr8 57100149 Intron 5b ASSOCIATION 20189936 Height 9.09691001301 PLAG1 LEAD_SNP rs13273123 chr8 57100791 Intron 7 ASSOCIATION 19893584 Height 5.52287874528 PLAG1 ASSOCIATION 19396169 Height 9.0 PLAG1 FUNCTIONAL_SNP rs4263734 chr8 57099931 Intron 7 860 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9650315 chr8 57155598 Intergenic 6 ASSOCIATION 18391950 Height 6.39794000867 CHCHD7 - SDR16C5 LEAD_SNP rs7815788 chr8 57179020 Intergenic 6 ASSOCIATION 19343178 Height 5.30102999566 CHCHD7 - SDR16C5 FUNCTIONAL_SNP rs13272414 chr8 57183609 Intergenic 2b 4589 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.946;0.895 FUNCTIONAL_SNP rs7829319 chr8 57172232 Intergenic 6 6788 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11988517 chr8 57181143 Intergenic 7 2123 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13270548 chr8 57196239 Intergenic 7 17219 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.898 FUNCTIONAL_SNP rs13248165 chr8 57192842 Intergenic 7 13822 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs4400356 chr8 57180161 Intergenic 7 1141 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5027179 chr8 57179633 Intergenic 7 613 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.82 FUNCTIONAL_SNP rs3924847 chr8 57197009 Intergenic 7 17989 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 LEAD_SNP rs954295 chr8 58306018 Intergenic 7 ASSOCIATION 20595579 Longevity 8.39794000867 RPL30P10 - FAM110B FUNCTIONAL_SNP rs4412357 chr8 58277301 Exon,non-coding 5b 28717 CEU:0.942;0.887, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs16922131 chr8 58333250 Intergenic 4 27232 CEU:1.0;0.894, YRI:0.91;0.706 FUNCTIONAL_SNP rs10086935 chr8 58336604 Intergenic 5b 30586 CEU:1.0;0.894 FUNCTIONAL_SNP rs6980937 chr8 58353996 Intergenic 5b 47978 CEU:1.0;0.847 FUNCTIONAL_SNP rs7822640 chr8 58326012 Intergenic 6 19994 CEU:1.0;0.847 FUNCTIONAL_SNP rs7842880 chr8 58344142 Intergenic 6 38124 CEU:1.0;0.894 FUNCTIONAL_SNP rs17819759 chr8 58340503 Intergenic 6 34485 CEU:1.0;0.894, YRI:0.78;0.561 FUNCTIONAL_SNP rs7845847 chr8 58327021 Intergenic 6 21003 CEU:1.0;0.846 FUNCTIONAL_SNP rs7845730 chr8 58349767 Intergenic 6 43749 CEU:1.0;0.894 FUNCTIONAL_SNP rs6984314 chr8 58276682 Intron 6 29336 CEU:0.942;0.887, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs16922135 chr8 58334418 Intergenic 7 28400 CEU:1.0;0.804 FUNCTIONAL_SNP rs7818642 chr8 58316315 Intergenic 7 10297 CEU:1.0;0.847 FUNCTIONAL_SNP rs10101274 chr8 58337280 Intergenic 7 31262 CEU:1.0;0.894, YRI:0.909;0.676 FUNCTIONAL_SNP rs4738594 chr8 58324397 Intergenic 7 18379 CEU:1.0;0.847 FUNCTIONAL_SNP rs17332173 chr8 58332391 Intergenic 7 26373 CEU:1.0;0.894, YRI:0.784;0.591 FUNCTIONAL_SNP rs1317836 chr8 58291175 Intergenic 7 14843 CEU:1.0;0.804 FUNCTIONAL_SNP rs13253851 chr8 58308757 Intergenic 7 2739 CEU:1.0;0.847 LEAD_SNP rs1436013 chr8 58778118 Intergenic 6 ASSOCIATION 20595579 Longevity 10.0 RPL30P10 - FAM110B FUNCTIONAL_SNP rs4738633 chr8 58774049 Intergenic 5b 4069 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:0.951;0.678 FUNCTIONAL_SNP rs2875772 chr8 58775544 Intergenic 5b 2574 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946 FUNCTIONAL_SNP rs11988959 chr8 58766723 Intergenic 6 11395 CEU:1.0;0.933 FUNCTIONAL_SNP rs2099519 chr8 58776063 Intergenic 7 2055 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946 FUNCTIONAL_SNP rs6991430 chr8 58778100 Intergenic 7 18 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs4738632 chr8 58763763 Intergenic 7 14355 CEU:1.0;0.933, CHB:1.0;0.946, JPT:1.0;0.946, YRI:1.0;0.875 FUNCTIONAL_SNP rs7834994 chr8 58762889 Intergenic 7 15229 CEU:1.0;0.933, CHB:1.0;0.946, JPT:1.0;0.946, YRI:1.0;0.875 LEAD_SNP rs1992045 chr8 58840924 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.69897000434 RPL30P10 - FAM110B FUNCTIONAL_SNP rs9650190 chr8 58839349 Intergenic 2b 1575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.872 FUNCTIONAL_SNP rs9650191 chr8 58839361 Intergenic 4 1563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs9650189 chr8 58839145 Intergenic 5b 1779 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1992044 chr8 58840908 Intergenic 6 16 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10808687 chr8 58843403 Intergenic 7 2479 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9650188 chr8 58838982 Intergenic 7 1942 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs9650187 chr8 58838917 Intergenic 7 2007 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1992046 chr8 58840965 Intergenic 7 41 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9650192 chr8 58841890 Intergenic 7 966 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9650193 chr8 58841951 Intergenic 7 1027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16922798 chr8 58837994 Intergenic 7 2930 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0 FUNCTIONAL_SNP rs7815434 chr8 58839968 Intergenic 7 956 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs960089 chr8 59708309 Intergenic 5b ASSOCIATION 19734545 Cognitive performance 5.22184874962 RPS26P7 - TOX LEAD_SNP rs3110127 chr8 60130296 Intergenic 7 ASSOCIATION 20031603 RR interval (heart rate) 5.39794000867 TOX - CA8 LEAD_SNP rs6995588 chr8 61003897 Intergenic 7 ASSOCIATION 21348951 Cardiac hypertrophy 5.69897000434 TOX - CA8 LEAD_SNP rs903027 chr8 62409428 Intron 7 ASSOCIATION 21116278 MRI atrophy measures 5.22184874962 CLVS1 FUNCTIONAL_SNP rs7005455 chr8 62439037 Intron 5b 29609 CEU:1.0;0.923, CHB:1.0;0.756, JPT:0.924;0.6 FUNCTIONAL_SNP rs7013189 chr8 62419120 Intron 6 9692 CEU:1.0;0.923, CHB:1.0;0.792, JPT:1.0;0.667 FUNCTIONAL_SNP rs7011243 chr8 62440351 Intron 7 30923 CEU:1.0;0.923, CHB:1.0;0.721, JPT:0.924;0.6 FUNCTIONAL_SNP rs16927435 chr8 62426757 Intron 7 17329 CEU:1.0;0.918, CHB:1.0;0.91, JPT:0.936;0.876, YRI:1.0;0.84 FUNCTIONAL_SNP rs1968990 chr8 62404028 Intron 7 5400 CEU:1.0;1.0, CHB:1.0;0.829, JPT:1.0;0.667 FUNCTIONAL_SNP rs16918881 chr8 62416173 Intron 7 6745 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.84 FUNCTIONAL_SNP rs2640239 chr8 62406199 Intron 7 3229 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;0.667 FUNCTIONAL_SNP rs2640241 chr8 62410115 Intron 7 687 CEU:1.0;1.0, CHB:1.0;0.822, JPT:1.0;0.695 LEAD_SNP rs16936455 chr8 70724754 Intron 7 ASSOCIATION 20041166 HIV-1 control 5.15490195999 SLCO5A1 FUNCTIONAL_SNP rs10504461 chr8 70725287 Intron 5b 533 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16936448 chr8 70719109 Intron 6 5645 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0 FUNCTIONAL_SNP rs16936450 chr8 70723415 Intron 7 1339 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2218488 chr8 72263956 Intron 5b ASSOCIATION 17903308 Sleepiness 5.52287874528 EYA1 LEAD_SNP rs1963982 chr8 73106916 Intergenic 7 ASSOCIATION 17903302 Blood pressure 5.52287874528 TRPA1 - KCNB2 FUNCTIONAL_SNP rs7017477 chr8 73088689 Intergenic 5a 18227 CEU:1.0;0.961, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10283081 chr8 73093134 Intergenic 5a 13782 CEU:0.958;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10089157 chr8 73107868 Intergenic 5a 952 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs9298203 chr8 73107722 Intergenic 5a 806 CEU:0.958;0.919, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs727599 chr8 73109543 Intron 5b 2627 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs4738217 chr8 73092307 Intergenic 5b 14609 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2014899 chr8 73109869 Intron 6 2953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs12682371 chr8 73105442 Intergenic 6 1474 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4738224 chr8 73106311 Intergenic 6 605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6999268 chr8 73095698 Intergenic 6 11218 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1031991 chr8 73106973 Intergenic 6 57 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4737344 chr8 73091480 Intergenic 6 15436 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13270429 chr8 73082737 Intergenic 6 24179 CEU:1.0;1.0, CHB:1.0;0.902, JPT:1.0;0.814, YRI:1.0;0.916 FUNCTIONAL_SNP rs1871877 chr8 73092434 Intergenic 7 14482 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1842718 chr8 73115895 Intergenic 7 8979 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.916 FUNCTIONAL_SNP rs4361799 chr8 73091939 Intergenic 7 14977 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7461960 chr8 73091826 Intergenic 7 15090 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7818339 chr8 73115028 Intergenic 7 8112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.916 FUNCTIONAL_SNP rs2170472 chr8 73103980 Intergenic 7 2936 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7010938 chr8 73091053 Intergenic 7 15863 CEU:1.0;0.961, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4738216 chr8 73091406 Intergenic 7 15510 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2007213 chr8 73087725 Intergenic 7 19191 CEU:1.0;0.961, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4738223 chr8 73103531 Intergenic 7 3385 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7822093 chr8 73112262 Intron 7 5346 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs1031989 chr8 73108146 Intergenic 7 1230 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs1031990 chr8 73107437 Intergenic 7 521 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs994164 chr8 73089635 Intergenic 7 17281 CEU:1.0;0.961, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13250435 chr8 73111273 Intron 7 4357 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs1482125 chr8 73116729 Intergenic 7 9813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.916 FUNCTIONAL_SNP rs1482126 chr8 73116202 Intergenic 7 9286 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.916 FUNCTIONAL_SNP rs1482129 chr8 73107561 Intergenic 7 645 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs6991275 chr8 73091368 Intergenic 7 15548 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1961391 chr8 73113119 Intron 7 6203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.916 FUNCTIONAL_SNP rs7017956 chr8 73088971 Intergenic 7 17945 CEU:1.0;0.961, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2116078 chr8 73363989 Intergenic 5b ASSOCIATION 19010793 Multiple sclerosis (age of onset) 5.52287874528 TRPA1 - KCNB2 FUNCTIONAL_SNP rs12056724 chr8 73375035 Intron 6 11046 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1431649 chr8 73371662 Intergenic 6 7673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12115120 chr8 73369141 Intergenic 7 5152 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4738251 chr8 73376997 Intron 7 13008 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2247572 chr8 73633028 Intron 7 ASSOCIATION 20125193 Cognitive test performance 6.0 KCNB2 FUNCTIONAL_SNP rs2253912 chr8 73650942 Intron 6 17914 CEU:1.0;0.838, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs2253667 chr8 73652648 Intron 6 19620 CEU:1.0;0.838, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs2247672 chr8 73632103 Intron 6 925 CEU:1.0;0.838, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.865 LEAD_SNP rs10504543 chr8 73778642 Intron 6 ASSOCIATION 17903301 Echocardiographic traits 5.30102999566 KCNB2 LEAD_SNP rs12679254 chr8 74274191 Intron 6 ASSOCIATION 18821565 Inattentive symptoms 5.69897000434 LOC100127988 FUNCTIONAL_SNP rs12678600 chr8 74272710 Intron 5b 1481 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.952;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs2383903 chr8 74275127 Intergenic 7 936 CEU:1.0;0.86, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4471028 chr8 75294975 Intergenic 6 ASSOCIATION 17903300 Waist circumference 6.69897000434 GDAP1 - PCBP2P2 FUNCTIONAL_SNP rs12548680 chr8 75294295 Intergenic 6 680 CEU:1.0;0.958, CHB:1.0;0.932, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs10109451 chr8 75305314 Intergenic 7 10339 CEU:0.957;0.916, CHB:1.0;0.925, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs10957716 chr8 75319519 Intergenic 7 24544 CEU:0.958;0.918, CHB:1.0;0.926, JPT:1.0;1.0, YRI:1.0;0.94 LEAD_SNP rs6472866 chr8 75513134 Intron 6 ASSOCIATION 18464913 Protein quantitative trait loci 6.09691001301 GDAP1 - PCBP2P2 FUNCTIONAL_SNP rs6472867 chr8 75513831 Intron 6 697 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.897 LEAD_SNP rs16939046 chr8 76147954 Intron 7 ASSOCIATION 21130836 Information processing speed 5.39794000867 CRISPLD1 - HNF4G FUNCTIONAL_SNP rs7823944 chr8 76182788 Intron 6 34834 CEU:0.898;0.807, CHB:0.898;0.735, JPT:1.0;0.767, YRI:1.0;1.0 FUNCTIONAL_SNP rs16939048 chr8 76149927 Intron 7 1973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2922763 chr8 76573711 Intergenic 6 ASSOCIATION 20935630 Body mass index 7.22184874962 HNF4G - MRPL9P1 FUNCTIONAL_SNP rs2920927 chr8 76692596 Intergenic 5b 118885 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;0.907 FUNCTIONAL_SNP rs2920933 chr8 76668922 Intergenic 5b 95211 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;0.907 FUNCTIONAL_SNP rs2977320 chr8 76688971 Intergenic 6 115260 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;0.907 FUNCTIONAL_SNP rs1449542 chr8 76607968 Intergenic 6 34257 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2596131 chr8 76629816 Intergenic 6 56105 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2920926 chr8 76701065 Intergenic 6 127354 CEU:1.0;0.914, CHB:1.0;0.954, JPT:1.0;0.863 FUNCTIONAL_SNP rs2596123 chr8 76652704 Intergenic 7 78993 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.91 FUNCTIONAL_SNP rs2596130 chr8 76631848 Intergenic 7 58137 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1375651 chr8 76660623 Intergenic 7 86912 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.908 FUNCTIONAL_SNP rs724436 chr8 76587911 Intergenic 7 14200 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2977318 chr8 76683732 Intergenic 7 110021 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;0.907 FUNCTIONAL_SNP rs2588785 chr8 76636191 Intergenic 7 62480 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs2588790 chr8 76608407 Intergenic 7 34696 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2588794 chr8 76641114 Intergenic 7 67403 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.954 LEAD_SNP rs7821178 chr8 78093837 Intergenic 5b ASSOCIATION 21102462 Menarche (age at onset) 8.52287874528 PEX2 - PKIA FUNCTIONAL_SNP rs7842996 chr8 78107140 Intergenic 5b 13303 CEU:1.0;0.813 FUNCTIONAL_SNP rs2123397 chr8 78105153 Intergenic 6 11316 CEU:1.0;0.817 FUNCTIONAL_SNP rs4735765 chr8 78097805 Intergenic 6 3968 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;0.711 FUNCTIONAL_SNP rs4735770 chr8 78148158 Intergenic 6 54321 CEU:0.96;0.888 FUNCTIONAL_SNP rs6989596 chr8 78153487 Intergenic 6 59650 CEU:0.96;0.888 FUNCTIONAL_SNP rs17379354 chr8 78108034 Intergenic 6 14197 CEU:1.0;0.815 FUNCTIONAL_SNP rs6473011 chr8 78111261 Intergenic 6 17424 CEU:1.0;0.821 FUNCTIONAL_SNP rs2167732 chr8 78111145 Intergenic 6 17308 CEU:1.0;0.821 FUNCTIONAL_SNP rs11781571 chr8 78120273 Intergenic 6 26436 CEU:1.0;0.819 FUNCTIONAL_SNP rs10107588 chr8 78106974 Intergenic 6 13137 CEU:1.0;0.817 FUNCTIONAL_SNP rs10096619 chr8 78112513 Intergenic 7 18676 CEU:1.0;0.812 FUNCTIONAL_SNP rs2123403 chr8 78110825 Intergenic 7 16988 CEU:1.0;0.819 FUNCTIONAL_SNP rs1452816 chr8 78123233 Intergenic 7 29396 CEU:1.0;0.821 FUNCTIONAL_SNP rs4735766 chr8 78099782 Intergenic 7 5945 CEU:1.0;0.807 FUNCTIONAL_SNP rs4735767 chr8 78099795 Intergenic 7 5958 CEU:1.0;0.812 FUNCTIONAL_SNP rs11778981 chr8 78112184 Intergenic 7 18347 CEU:1.0;0.821 FUNCTIONAL_SNP rs2167733 chr8 78110734 Intergenic 7 16897 CEU:1.0;0.81 FUNCTIONAL_SNP rs2167734 chr8 78110704 Intergenic 7 16867 CEU:1.0;0.821 FUNCTIONAL_SNP rs10504649 chr8 78119533 Intergenic 7 25696 CEU:1.0;0.821 FUNCTIONAL_SNP rs1993195 chr8 78109823 Intergenic 7 15986 CEU:1.0;0.823 LEAD_SNP rs7846385 chr8 78160179 Intergenic 7 ASSOCIATION 18391951 Height 7.30102999566 PEX2 - PKIA FUNCTIONAL_SNP rs6473015 chr8 78178485 Intergenic 5b 18306 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6996877 chr8 78139368 Intergenic 6 20811 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs1452822 chr8 78138334 Intergenic 7 21845 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 LEAD_SNP rs3864663 chr8 78680349 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 5.69897000434 PEX2 - PKIA LEAD_SNP rs2717536 chr8 79701876 Intron 6 ASSOCIATION 20595579 Longevity 7.0 IL7 FUNCTIONAL_SNP rs10110519 chr8 79688026 Intron 6 13850 CEU:1.0;1.0, CHB:1.0;0.892, JPT:1.0;0.866, YRI:1.0;0.57 FUNCTIONAL_SNP rs9942766 chr8 79709182 Intron 7 7306 CEU:1.0;1.0, CHB:1.0;0.825, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs16906115 chr8 79712998 Intron 7 11122 CEU:1.0;1.0, CHB:1.0;0.892, JPT:1.0;1.0, YRI:0.912;0.686 FUNCTIONAL_SNP rs16906090 chr8 79689755 Intron 7 12121 CEU:1.0;0.866, CHB:1.0;0.792, JPT:1.0;0.866 FUNCTIONAL_SNP rs6473118 chr8 79701683 Intron 7 193 CEU:1.0;0.866, CHB:1.0;0.792, JPT:1.0;0.866 LEAD_SNP rs1460163 chr8 80227448 Intergenic 6 ASSOCIATION 19081515 Creutzfeldt-Jakob disease 7.22184874962 IL7 - RPL3P9 FUNCTIONAL_SNP rs10957920 chr8 80220508 Intron 3a 6940 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.954 FUNCTIONAL_SNP rs9643744 chr8 80212152 Intron 5b 15296 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs1531346 chr8 80220861 Intron 6 6587 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs1979314 chr8 80217206 Intron 7 10242 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs2169149 chr8 80218915 Intron 7 8533 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs1460161 chr8 80223986 Intron 7 3462 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs1460164 chr8 80227509 Intergenic 7 61 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs272594 chr8 81470120 Intergenic 6 ASSOCIATION 21507922 Neutrophil count 6.0 ZBTB10 - RPSAP47 FUNCTIONAL_SNP rs272590 chr8 81468008 Intergenic 5b 2112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs272595 chr8 81470769 Intergenic 6 649 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs272593 chr8 81469860 Intergenic 7 260 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs272596 chr8 81472374 Intergenic 7 2254 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.891 LEAD_SNP rs6473383 chr8 83669120 Intergenic 6 ASSOCIATION 20445134 Heart failure 5.52287874528 HNRNPA1P4 - RALYL FUNCTIONAL_SNP rs10958128 chr8 83666511 Intergenic 7 2609 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs7818191 chr8 83639879 Intergenic 7 29241 CEU:0.932;0.812, CHB:1.0;1.0 FUNCTIONAL_SNP rs7822192 chr8 83640539 Intergenic 7 28581 CEU:0.932;0.812, CHB:1.0;1.0 LEAD_SNP rs1375785 chr8 83991231 Intergenic 7 ASSOCIATION 21130836 Information processing speed 5.09691001301 HNRNPA1P4 - RALYL FUNCTIONAL_SNP rs6651340 chr8 83960872 Intergenic 3a 30359 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449809 chr8 83978088 Intergenic 4 13143 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.718 FUNCTIONAL_SNP rs2122345 chr8 83985966 Intergenic 5a 5265 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449808 chr8 83977982 Intergenic 5a 13249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449810 chr8 83978209 Intergenic 5a 13022 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs7000231 chr8 83958928 Intergenic 5b 32303 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs12546819 chr8 83964046 Intergenic 5b 27185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.72 FUNCTIONAL_SNP rs10958138 chr8 83958106 Intergenic 5b 33125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs7825851 chr8 83958227 Intergenic 5b 33004 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs4739919 chr8 83985296 Intergenic 5b 5935 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449820 chr8 83993238 Intergenic 5b 2007 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1449830 chr8 83964034 Intergenic 5b 27197 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.72 FUNCTIONAL_SNP rs11783187 chr8 83992041 Intergenic 6 810 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1375778 chr8 83968407 Intergenic 6 22824 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1375780 chr8 83970762 Intergenic 6 20469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1375784 chr8 83983329 Intergenic 6 7902 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.787 FUNCTIONAL_SNP rs1375788 chr8 83946036 Intergenic 6 45195 CEU:1.0;0.879, CHB:0.901;0.812, JPT:1.0;0.733 FUNCTIONAL_SNP rs2122348 chr8 83962100 Intergenic 6 29131 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs2122349 chr8 83961283 Intergenic 6 29948 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.672 FUNCTIONAL_SNP rs7823483 chr8 83969875 Intergenic 6 21356 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs7825517 chr8 83957991 Intergenic 6 33240 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs6473405 chr8 83959405 Intergenic 6 31826 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs6473407 chr8 83962435 Intergenic 6 28796 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.706 FUNCTIONAL_SNP rs2084558 chr8 83953380 Intergenic 6 37851 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.707 FUNCTIONAL_SNP rs2084559 chr8 83953348 Intergenic 6 37883 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs4739916 chr8 83965107 Intergenic 6 26124 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs4739918 chr8 83965896 Intergenic 6 25335 CEU:1.0;1.0 FUNCTIONAL_SNP rs7000430 chr8 83987240 Intergenic 6 3991 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.611 FUNCTIONAL_SNP rs1530752 chr8 83960372 Intergenic 6 30859 CEU:1.0;1.0, CHB:1.0;0.821, JPT:1.0;0.688 FUNCTIONAL_SNP rs7824274 chr8 83950492 Intergenic 6 40739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs6651338 chr8 83960583 Intergenic 6 30648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.776 FUNCTIONAL_SNP rs9298400 chr8 83975909 Intergenic 6 15322 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.731 FUNCTIONAL_SNP rs7823332 chr8 83969792 Intergenic 6 21439 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs896009 chr8 83984625 Intergenic 7 6606 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs896010 chr8 83984810 Intergenic 7 6421 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1375782 chr8 83976272 Intergenic 7 14959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs7845988 chr8 83951982 Intergenic 7 39249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs2122342 chr8 83955796 Intergenic 7 35435 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs12675705 chr8 83987461 Intergenic 7 3770 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs7820422 chr8 83957420 Intergenic 7 33811 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs10093164 chr8 83969619 Intergenic 7 21612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs7459472 chr8 83980091 Intergenic 7 11140 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs7812754 chr8 83980434 Intergenic 7 10797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.706 FUNCTIONAL_SNP rs6473411 chr8 83992779 Intergenic 7 1548 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs993429 chr8 83986887 Intergenic 7 4344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs5028506 chr8 83967105 Intergenic 7 24126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1823437 chr8 83968656 Intergenic 7 22575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs10464939 chr8 83991819 Intergenic 7 588 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs978610 chr8 83989437 Intergenic 7 1794 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10100921 chr8 83953008 Intergenic 7 38223 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs6473408 chr8 83968998 Intergenic 7 22233 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs6473409 chr8 83975029 Intergenic 7 16202 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.707 FUNCTIONAL_SNP rs6473410 chr8 83975139 Intergenic 7 16092 CEU:1.0;1.0 FUNCTIONAL_SNP rs1072836 chr8 83946512 Intergenic 7 44719 CEU:1.0;1.0 FUNCTIONAL_SNP rs2084557 chr8 83956893 Intergenic 7 34338 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs2034473 chr8 83966359 Intergenic 7 24872 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs10282749 chr8 83943848 Intergenic 7 47383 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.707 FUNCTIONAL_SNP rs7823110 chr8 83976860 Intergenic 7 14371 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10101004 chr8 83971478 Intergenic 7 19753 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1839396 chr8 83977644 Intergenic 7 13587 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;0.671 FUNCTIONAL_SNP rs935721 chr8 83980953 Intergenic 7 10278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs12547886 chr8 83952231 Intergenic 7 39000 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449793 chr8 83955439 Intergenic 7 35792 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.706 FUNCTIONAL_SNP rs2167106 chr8 83970212 Intergenic 7 21019 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449795 chr8 83953794 Intergenic 7 37437 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449800 chr8 83948168 Intergenic 7 43063 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.733 FUNCTIONAL_SNP rs4739917 chr8 83965600 Intergenic 7 25631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449811 chr8 83979627 Intergenic 7 11604 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449812 chr8 83979823 Intergenic 7 11408 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449813 chr8 83979910 Intergenic 7 11321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.706 FUNCTIONAL_SNP rs1449815 chr8 83982102 Intergenic 7 9129 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449816 chr8 83983230 Intergenic 7 8001 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.706 FUNCTIONAL_SNP rs1449817 chr8 83986339 Intergenic 7 4892 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1449819 chr8 83992489 Intergenic 7 1258 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs1449821 chr8 83996091 Intergenic 7 4860 CEU:1.0;0.866, CHB:1.0;1.0, JPT:0.91;0.661, YRI:1.0;1.0 FUNCTIONAL_SNP rs1449831 chr8 83963798 Intergenic 7 27433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.69 FUNCTIONAL_SNP rs10958141 chr8 83988800 Intergenic 7 2431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1584543 chr8 83974710 Intergenic 7 16521 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1584544 chr8 83974721 Intergenic 7 16510 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs7829421 chr8 83951626 Intergenic 7 39605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs11777458 chr8 83963362 Intergenic 7 27869 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.706 FUNCTIONAL_SNP rs1597375 chr8 83973217 Intergenic 7 18014 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs1597377 chr8 83987771 Intergenic 7 3460 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs7825874 chr8 83958316 Intergenic 7 32915 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs7008756 chr8 83972774 Intergenic 7 18457 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 FUNCTIONAL_SNP rs2100221 chr8 83956561 Intergenic 7 34670 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.733 LEAD_SNP rs4397449 chr8 90342186 Intergenic 5b ASSOCIATION 20125193 Cognitive test performance 5.52287874528 MMP16 - RIPK2 LEAD_SNP rs160441 chr8 90656988 Intergenic 5a ASSOCIATION 20694014 Tuberculosis 5.09691001301 MMP16 - RIPK2 FUNCTIONAL_SNP rs160448 chr8 90659850 Intergenic 2b 2862 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs218886 chr8 90690593 Intergenic 5b 33605 CEU:1.0;0.959, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs160427 chr8 90671384 Intergenic 5b 14396 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs160429 chr8 90673483 Intergenic 5b 16495 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs160437 chr8 90681884 Intergenic 5b 24896 CEU:1.0;0.962, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs160449 chr8 90660515 Intergenic 6 3527 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.859 FUNCTIONAL_SNP rs218917 chr8 90701130 Intergenic 7 44142 CEU:1.0;0.959, CHB:1.0;0.938, JPT:1.0;0.943, YRI:1.0;0.831 FUNCTIONAL_SNP rs160422 chr8 90669838 Intergenic 7 12850 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs160451 chr8 90662941 Intergenic 7 5953 CEU:1.0;1.0, CHB:0.936;0.876, JPT:1.0;1.0, YRI:1.0;0.928 LEAD_SNP rs42490 chr8 90778513 Intron 7 ASSOCIATION 20018961 Leprosy 16.0 RIPK2 FUNCTIONAL_SNP rs39499 chr8 90770609 Intron 2b 7904 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs40544 chr8 90781095 Intron 6 2582 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs431264 chr8 90777510 Intron 6 1003 CEU:1.0;0.914, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs40377 chr8 90781953 Intron 6 3440 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs40457 chr8 90823687 Intergenic 5b ASSOCIATION 20018961 Leprosy 12.0 RIPK2 - OSGIN2 FUNCTIONAL_SNP rs39515 chr8 90828989 Intergenic 5b 5302 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs394108 chr8 90825219 Intergenic 5b 1532 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.87 FUNCTIONAL_SNP rs369771 chr8 90836112 Intergenic 6 12425 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.941;0.885, YRI:1.0;1.0 FUNCTIONAL_SNP rs40637 chr8 90823310 Intergenic 6 377 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs453266 chr8 90836017 Intergenic 7 12330 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.941;0.885, YRI:1.0;1.0 FUNCTIONAL_SNP rs28144 chr8 90822759 Intergenic 7 928 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs896854 chr8 95960511 Intron 5b ASSOCIATION 20581827 Type 2 diabetes 9.0 TP53INP1 FUNCTIONAL_SNP rs4735339 chr8 95974373 Intron 2b 13862 CEU:0.955;0.804, CHB:0.922;0.849, JPT:1.0;0.89, YRI:1.0;0.606 FUNCTIONAL_SNP rs13255935 chr8 95965685 Intron 5b 5174 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs13257021 chr8 95965695 Intron 5b 5184 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.789 FUNCTIONAL_SNP rs7845219 chr8 95937502 Intron 6 23009 CEU:0.958;0.847, CHB:0.922;0.85, JPT:1.0;0.787, YRI:0.946;0.739 LEAD_SNP rs4392868 chr8 96120072 Intergenic 7 ASSOCIATION 20923822 Radiation response 5.09691001301 C8orf38 - PLEKHF2 FUNCTIONAL_SNP rs4735344 chr8 96114873 Intergenic 2b 5199 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2044034 chr8 96124391 Intergenic 5a 4319 CEU:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs2583365 chr8 96130087 Intergenic 5a 10015 CEU:1.0;1.0 FUNCTIONAL_SNP rs1466169 chr8 96116997 Intergenic 5a 3075 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7000734 chr8 96127030 Intergenic 5b 6958 CEU:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs11781181 chr8 96122997 Intergenic 6 2925 CEU:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs1561714 chr8 96119975 Intergenic 6 97 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1561715 chr8 96119914 Intergenic 6 158 CEU:1.0;1.0, YRI:1.0;0.763 FUNCTIONAL_SNP rs1975425 chr8 96119707 Intergenic 7 365 CEU:1.0;1.0, YRI:1.0;0.531 FUNCTIONAL_SNP rs7822998 chr8 96120565 Intergenic 7 493 CEU:1.0;1.0, YRI:1.0;0.763 FUNCTIONAL_SNP rs2678841 chr8 96088515 Intron 7 31557 CEU:1.0;0.838 FUNCTIONAL_SNP rs297550 chr8 96101794 Intergenic 7 18278 CEU:1.0;0.886 FUNCTIONAL_SNP rs6471516 chr8 96100477 Intergenic 7 19595 CEU:1.0;0.838 FUNCTIONAL_SNP rs7000568 chr8 96117240 Intergenic 7 2832 CEU:1.0;1.0, YRI:1.0;0.763 LEAD_SNP rs7000734 chr8 96127030 Intergenic 5b ASSOCIATION 20923822 Radiation response 6.39794000867 C8orf38 - PLEKHF2 FUNCTIONAL_SNP rs4735344 chr8 96114873 Intergenic 2b 12157 CEU:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs2044034 chr8 96124391 Intergenic 5a 2639 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2583365 chr8 96130087 Intergenic 5a 3057 CEU:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs1466169 chr8 96116997 Intergenic 5a 10033 CEU:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs11781181 chr8 96122997 Intergenic 6 4033 CEU:1.0;1.0, YRI:1.0;0.607 FUNCTIONAL_SNP rs1561714 chr8 96119975 Intergenic 6 7055 CEU:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs1561715 chr8 96119914 Intergenic 6 7116 CEU:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs1975425 chr8 96119707 Intergenic 7 7323 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7822998 chr8 96120565 Intergenic 7 6465 CEU:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs4392868 chr8 96120072 Intergenic 7 6958 CEU:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs2678841 chr8 96088515 Intron 7 38515 CEU:1.0;0.838 FUNCTIONAL_SNP rs297550 chr8 96101794 Intergenic 7 25236 CEU:1.0;0.886, YRI:0.789;0.623 FUNCTIONAL_SNP rs6471516 chr8 96100477 Intergenic 7 26553 CEU:1.0;0.838 FUNCTIONAL_SNP rs7000568 chr8 96117240 Intergenic 7 9790 CEU:1.0;1.0, YRI:1.0;0.701 LEAD_SNP rs1835740 chr8 98166913 Intergenic 6 ASSOCIATION 20802479 Migraine 10.6989700043 PGCP - TSPYL5 LEAD_SNP rs6468544 chr8 98329765 Intergenic 5a ASSOCIATION 20921969 Antipsychotic-induced QTc interval prolongation 6.09691001301 TSPYL5 - RPS2P33 FUNCTIONAL_SNP rs16895513 chr8 98326973 Intergenic 7 2792 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16895514 chr8 98327059 Intergenic 7 2706 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 LEAD_SNP rs13278732 chr8 99088581 Intron 5b ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 5.22184874962 C8orf47 LEAD_SNP rs1371867 chr8 101330209 Intergenic 5b ASSOCIATION 21041692 Atrioventricular conduction 5.04575749056 RNF19A - ANKRD46 FUNCTIONAL_SNP rs6511 chr8 101252680 Coding 7 77529 CEU:0.917;0.808, CHB:1.0;0.907, JPT:0.95;0.902 FUNCTIONAL_SNP rs1660353 chr8 101250907 Intron 2b 79302 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.532 FUNCTIONAL_SNP rs1788205 chr8 101306546 Intron 3a 23663 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs1618528 chr8 101259134 Intergenic 4 71075 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs1788167 chr8 101319996 Intron 4 10213 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.532 FUNCTIONAL_SNP rs1660345 chr8 101322762 Intergenic 4 7447 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs2439460 chr8 101312665 Intron 5a 17544 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.532 FUNCTIONAL_SNP rs1788173 chr8 101330939 Intergenic 5a 730 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs1788174 chr8 101330957 Intergenic 5a 748 CEU:0.959;0.882, CHB:1.0;0.863, JPT:1.0;0.632 FUNCTIONAL_SNP rs1692007 chr8 101268343 Intergenic 5a 61866 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.532 FUNCTIONAL_SNP rs1660328 chr8 101303450 Intron 5a 26759 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.532 FUNCTIONAL_SNP rs1660348 chr8 101315248 Intron 5a 14961 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.532 FUNCTIONAL_SNP rs1616833 chr8 101271821 Intron 5b 58388 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.532 FUNCTIONAL_SNP rs1371868 chr8 101330267 Intergenic 5b 58 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.627 FUNCTIONAL_SNP rs1020171 chr8 101288610 Intron 5b 41599 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs1788186 chr8 101335686 Intergenic 5b 5477 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs1788187 chr8 101336099 Intergenic 5b 5890 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs2439456 chr8 101336874 Intergenic 5b 6665 CEU:1.0;0.922, CHB:1.0;0.781, JPT:1.0;0.598, YRI:1.0;0.532 FUNCTIONAL_SNP rs7830342 chr8 101327738 Intergenic 5b 2471 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs962451 chr8 101331010 Intergenic 5b 801 CEU:1.0;0.922, CHB:1.0;0.858, JPT:1.0;0.632 FUNCTIONAL_SNP rs962452 chr8 101331369 Intergenic 5b 1160 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs1660311 chr8 101330579 Intergenic 5b 370 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.632 FUNCTIONAL_SNP rs1660329 chr8 101304048 Intron 5b 26161 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs2919469 chr8 101233896 Intron 6 96313 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs959022 chr8 101295992 Intron 6 34217 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs1788181 chr8 101334068 Intergenic 6 3859 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs1788185 chr8 101335529 Intergenic 6 5320 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.632 FUNCTIONAL_SNP rs1788189 chr8 101249762 Intron 6 80447 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs1788194 chr8 101277916 Intron 6 52293 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs1788199 chr8 101292854 Intron 6 37355 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs1619759 chr8 101337560 Intergenic 6 7351 CEU:1.0;0.919, CHB:1.0;0.851, JPT:1.0;0.601 FUNCTIONAL_SNP rs1788209 chr8 101337056 Intergenic 6 6847 CEU:1.0;0.885, CHB:1.0;0.781, JPT:1.0;0.533 FUNCTIONAL_SNP rs1692004 chr8 101247320 Intron 6 82889 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.533 FUNCTIONAL_SNP rs2861348 chr8 101285074 Intron 6 45135 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.532 FUNCTIONAL_SNP rs1660316 chr8 101333049 Intergenic 6 2840 CEU:1.0;0.92, CHB:1.0;0.862, JPT:1.0;0.614 FUNCTIONAL_SNP rs1660327 chr8 101292206 Intron 6 38003 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs1660330 chr8 101305015 Intron 6 25194 CEU:1.0;0.913, CHB:1.0;0.901, JPT:1.0;0.621 FUNCTIONAL_SNP rs1660332 chr8 101309490 Intron 6 20719 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.532 FUNCTIONAL_SNP rs1660333 chr8 101309989 Intron 6 20220 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs1660338 chr8 101242757 Intron 6 87452 CEU:1.0;0.958, CHB:1.0;1.0, JPT:0.951;0.904 FUNCTIONAL_SNP rs1660351 chr8 101275034 Intron 6 55175 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs2919471 chr8 101232701 Intron 7 97508 CEU:1.0;0.922, CHB:0.947;0.814, JPT:1.0;0.651 FUNCTIONAL_SNP rs2453624 chr8 101230523 Intron 7 99686 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs2047249 chr8 101234126 Intron 7 96083 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs1788184 chr8 101335106 Intergenic 7 4897 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs1788196 chr8 101290088 Intron 7 40121 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.532 FUNCTIONAL_SNP rs1788197 chr8 101290928 Intron 7 39281 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.532 FUNCTIONAL_SNP rs1788203 chr8 101303721 Intron 7 26488 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs1788204 chr8 101303936 Intron 7 26273 CEU:1.0;0.959, CHB:0.897;0.767 FUNCTIONAL_SNP rs1788206 chr8 101306966 Intron 7 23243 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.598 FUNCTIONAL_SNP rs1692006 chr8 101252462 Intron 7 77747 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs1660313 chr8 101332712 Intergenic 7 2503 CEU:1.0;0.922, CHB:1.0;0.863, JPT:1.0;0.632 FUNCTIONAL_SNP rs1660319 chr8 101337530 Intergenic 7 7321 CEU:1.0;0.922, CHB:1.0;0.821, JPT:1.0;0.598, YRI:1.0;0.532 FUNCTIONAL_SNP rs1660349 chr8 101319326 Intron 7 10883 CEU:1.0;0.918, CHB:1.0;0.863, JPT:1.0;0.565 FUNCTIONAL_SNP rs1612773 chr8 101337818 Intergenic 7 7609 CEU:1.0;0.922, CHB:1.0;0.821, JPT:1.0;0.598, YRI:1.0;0.532 LEAD_SNP rs3108919 chr8 101841546 Intergenic 7 ASSOCIATION 19754311 AIDS 5.39794000867 RPS20P23 - RPS26P6 FUNCTIONAL_SNP rs3105443 chr8 101841108 Intergenic 5a 438 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2135120 chr8 101840079 Intergenic 6 1467 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 LEAD_SNP rs931812 chr8 101919321 Intergenic 4 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.30102999566 RPS26P6 - YWHAZ FUNCTIONAL_SNP rs4734495 chr8 101917817 Intergenic 4 1504 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs4236763 chr8 101913022 Intergenic 4 6299 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs2102290 chr8 101919844 Intergenic 5b 523 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1264202 chr8 102227923 Intergenic 7 ASSOCIATION 21107309 Reasoning 5.69897000434 ZNF706 - RNU7-67P LEAD_SNP rs517811 chr8 102944863 Intron 6 ASSOCIATION 20125193 Cognitive test performance 5.30102999566 NCALD LEAD_SNP rs2458413 chr8 105359432 Intron 5b ASSOCIATION 21623375 Paget's disease 16.15490196 TM7SF4 FUNCTIONAL_SNP rs2458414 chr8 105355840 Intron 5b 3592 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 LEAD_SNP rs16872085 chr8 105957540 Intergenic 6 ASSOCIATION 21658281 Sudden cardiac arrest 6.0 LRP12 - RPL23P9 LEAD_SNP rs977396 chr8 105992696 Intergenic 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.52287874528 LRP12 - RPL23P9 FUNCTIONAL_SNP rs7812848 chr8 106017476 Intergenic 6 24780 CEU:1.0;0.865, CHB:1.0;0.91, JPT:1.0;1.0 FUNCTIONAL_SNP rs1155444 chr8 105985323 Intergenic 7 7373 CEU:1.0;0.879 LEAD_SNP rs4534106 chr8 108789816 Intergenic 5b ASSOCIATION 20171287 Brain structure 6.0 ANGPT1 - RSPO2 FUNCTIONAL_SNP rs6997568 chr8 108783517 Intergenic 5b 6299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13252008 chr8 108774076 Intergenic 6 15740 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2935776 chr8 109629903 Intron 6 ASSOCIATION 20932310 T-tau 6.22184874962 TTC35 - TMEM74 FUNCTIONAL_SNP rs2928830 chr8 109619525 Exon,non-coding 5a 10378 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.853 FUNCTIONAL_SNP rs2928831 chr8 109619596 Exon,non-coding 5a 10307 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.853 FUNCTIONAL_SNP rs3019412 chr8 109617773 Intron 5a 12130 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.936;0.824 FUNCTIONAL_SNP rs3019414 chr8 109617866 Intron 5a 12037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.853 FUNCTIONAL_SNP rs871996 chr8 109632287 Intron 5b 2384 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs871997 chr8 109632324 Intron 5b 2421 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3019379 chr8 109632571 Intron 5b 2668 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1552087 chr8 109609660 Intron 5b 20243 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs2935783 chr8 109625412 Intron 5b 4491 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.927;0.802 FUNCTIONAL_SNP rs1497638 chr8 109631472 Intron 6 1569 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs1497641 chr8 109646121 Intron 6 16218 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1391204 chr8 109629394 Intron 6 509 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.853 FUNCTIONAL_SNP rs3019378 chr8 109630976 Intron 6 1073 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs3019390 chr8 109647336 Intron 6 17433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2928833 chr8 109622068 Intron 6 7835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.853 FUNCTIONAL_SNP rs2928835 chr8 109622398 Intron 6 7505 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs2935772 chr8 109644428 Intron 6 14525 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2935775 chr8 109639307 Intron 6 9404 CEU:1.0;1.0, CHB:1.0;0.923, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2935784 chr8 109621281 Intron 6 8622 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.853 FUNCTIONAL_SNP rs1391205 chr8 109629577 Intron 7 326 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3019377 chr8 109630097 Intron 7 194 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3019381 chr8 109633256 Intron 7 3353 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3019382 chr8 109633588 Intron 7 3685 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3019383 chr8 109633624 Intron 7 3721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs3019386 chr8 109643132 Intron 7 13229 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs3019387 chr8 109644103 Intron 7 14200 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs3019388 chr8 109644177 Intron 7 14274 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs3019391 chr8 109647952 Intron 7 18049 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs3019400 chr8 109654818 Intron 7 24915 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2928824 chr8 109611086 Intron 7 18817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.853 FUNCTIONAL_SNP rs2928826 chr8 109614094 Intron 7 15809 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.853 FUNCTIONAL_SNP rs2928828 chr8 109616923 Intron 7 12980 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.847 FUNCTIONAL_SNP rs2928834 chr8 109622086 Intron 7 7817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.853 FUNCTIONAL_SNP rs736590 chr8 109618842 Intron 7 11061 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs949603 chr8 109637984 Intron 7 8081 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs2935778 chr8 109627416 Intron 7 2487 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs2935779 chr8 109626882 Intron 7 3021 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.861 FUNCTIONAL_SNP rs2935780 chr8 109626567 Intron 7 3336 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:0.947;0.853 FUNCTIONAL_SNP rs2935781 chr8 109626090 Intron 7 3813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.853 FUNCTIONAL_SNP rs904176 chr8 109633092 Intron 7 3189 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 LEAD_SNP rs7832552 chr8 110115676 Intron 7 ASSOCIATION 19268274 Body mass (lean) 9.39794000867 TRHR FUNCTIONAL_SNP rs7828207 chr8 110130010 Intron 4 14334 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs4236801 chr8 110123049 Intron 7 7373 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs16892486 chr8 110109433 Intron 7 6243 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs11785269 chr8 110125307 Intron 7 9631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.914 LEAD_SNP rs17658378 chr8 116394075 Intergenic 7 ASSOCIATION 18937294 Attention deficit hyperactivity disorder (time to onset) 5.04575749056 RPL18P7 - TRPS1 LEAD_SNP rs4876662 chr8 117556270 Intergenic 7 ASSOCIATION 21223598 Aortic root size 5.69897000434 TRPS1 - EIF3H FUNCTIONAL_SNP rs4876358 chr8 117521293 Intergenic 3a 34977 CEU:1.0;0.805, CHB:1.0;0.954, JPT:1.0;0.953, YRI:0.929;0.807 FUNCTIONAL_SNP rs10088293 chr8 117521331 Intergenic 5a 34939 CEU:1.0;0.805, CHB:1.0;0.954, JPT:1.0;0.952, YRI:0.929;0.807 FUNCTIONAL_SNP rs4876359 chr8 117534096 Intergenic 5b 22174 CEU:1.0;0.936, CHB:1.0;0.954, JPT:1.0;0.953, YRI:0.929;0.807 FUNCTIONAL_SNP rs6987106 chr8 117552823 Intergenic 5b 3447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4876659 chr8 117526870 Intergenic 5b 29400 CEU:1.0;0.805, CHB:1.0;0.954, JPT:1.0;0.953, YRI:0.929;0.807 FUNCTIONAL_SNP rs4876661 chr8 117545750 Intergenic 6 10520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6469649 chr8 117548699 Intergenic 7 7571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7825301 chr8 117519103 Intergenic 7 37167 CEU:1.0;0.805, CHB:1.0;0.954, JPT:1.0;0.953, YRI:0.929;0.807 FUNCTIONAL_SNP rs4361786 chr8 117523035 Intergenic 7 33235 CEU:1.0;0.805, CHB:0.951;0.905, JPT:1.0;0.952, YRI:0.929;0.807 FUNCTIONAL_SNP rs4876360 chr8 117556284 Intergenic 7 14 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4398956 chr8 117531492 Intergenic 7 24778 CEU:1.0;0.805, CHB:1.0;0.954, JPT:1.0;0.953, YRI:0.929;0.807 LEAD_SNP rs16892766 chr8 117630683 Intergenic 2b ASSOCIATION 18372905 Colorectal cancer 17.5228787453 TRPS1 - EIF3H LEAD_SNP rs13266634 chr8 118184783 Coding 4 ASSOCIATION 19734900 Type 2 diabetes and other traits 7.09691001301 SLC30A8 ASSOCIATION 19401414 Type 2 diabetes 13.6989700043 SLC30A8 ASSOCIATION 19096518 Glycated hemoglobin levels 7.30102999566 SLC30A8 ASSOCIATION 19056611 Type 2 diabetes 5.15490195999 SLC30A8 ASSOCIATION 17463246 Type 2 diabetes 7.30102999566 SLC30A8 ASSOCIATION 17463248 Type 2 diabetes 7.30102999566 SLC30A8 ASSOCIATION 17460697 Type 2 diabetes 5.52287874528 SLC30A8 ASSOCIATION 17463249 Type 2 diabetes 7.30102999566 SLC30A8 ASSOCIATION 17293876 Type 2 diabetes 7.22184874962 SLC30A8 FUNCTIONAL_SNP rs3802177 chr8 118185025 Exon,non-coding 6 242 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs11558471 chr8 118185733 Exon,non-coding 7 950 CEU:1.0;0.949, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs3802177 chr8 118185025 Exon,non-coding 6 ASSOCIATION 20581827 Type 2 diabetes 8.0 SLC30A8 FUNCTIONAL_SNP rs13266634 chr8 118184783 Coding 4 242 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs11558471 chr8 118185733 Exon,non-coding 7 708 CEU:1.0;0.949, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11558471 chr8 118185733 Exon,non-coding 7 ASSOCIATION 20081858 Fasting glucose-related traits 10.5228787453 SLC30A8 FUNCTIONAL_SNP rs13266634 chr8 118184783 Coding 4 950 CEU:1.0;0.949, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs3802177 chr8 118185025 Exon,non-coding 6 708 CEU:1.0;0.949, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11989122 chr8 118827839 Intron 5b ASSOCIATION 19893584 Height 5.22184874962 EXT1 LEAD_SNP rs4355801 chr8 119923873 Intergenic 7 ASSOCIATION 18455228 Bone mineral density 9.09691001301 RPS26P35 - TNFRSF11B FUNCTIONAL_SNP rs10955908 chr8 119904557 Intergenic 5a 19316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13277230 chr8 119922993 Intergenic 5b 880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11573829 chr8 119959623 Intron 5b 35750 CEU:0.958;0.815, CHB:1.0;1.0, JPT:0.929;0.808, YRI:1.0;1.0 FUNCTIONAL_SNP rs10101385 chr8 119923850 Intergenic 6 23 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4407910 chr8 119917117 Intergenic 7 6756 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6415470 chr8 119955111 Intron 7 31238 CEU:0.958;0.815, CHB:1.0;1.0, JPT:0.929;0.808, YRI:1.0;1.0 FUNCTIONAL_SNP rs13250753 chr8 119906692 Intergenic 7 17181 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.925, YRI:1.0;1.0 FUNCTIONAL_SNP rs7463176 chr8 119957625 Intron 7 33752 CEU:0.958;0.815, CHB:1.0;1.0, JPT:0.929;0.808, YRI:1.0;1.0 LEAD_SNP rs2062375 chr8 119977792 Intergenic 6 ASSOCIATION 20548944 Osteoporosis 10.5228787453 TNFRSF11B - COLEC10 FUNCTIONAL_SNP rs2220189 chr8 120007708 Exon,non-coding 5b 29916 CEU:0.963;0.927, CHB:0.95;0.903, JPT:1.0;0.936 FUNCTIONAL_SNP rs6469798 chr8 120018291 Intron 2b 40499 CEU:0.958;0.815, CHB:0.915;0.505, JPT:0.931;0.867 FUNCTIONAL_SNP rs6469796 chr8 120018042 Intron 5a 40250 CEU:0.958;0.815, CHB:0.915;0.505, JPT:0.931;0.867 FUNCTIONAL_SNP rs10955908 chr8 119904557 Intergenic 5a 73235 CEU:0.923;0.821, CHB:1.0;1.0, JPT:0.93;0.81 FUNCTIONAL_SNP rs4305930 chr8 120058021 Intron 5b 80229 CEU:0.96;0.825, CHB:0.92;0.521, JPT:0.932;0.869 FUNCTIONAL_SNP rs12682278 chr8 120032328 Intron 5b 54536 CEU:0.958;0.815, CHB:0.915;0.505, JPT:0.931;0.867 FUNCTIONAL_SNP rs2062377 chr8 120007420 Intergenic 5b 29628 CEU:1.0;0.963, CHB:0.95;0.903, JPT:1.0;0.936 FUNCTIONAL_SNP rs13277230 chr8 119922993 Intergenic 5b 54799 CEU:0.924;0.853, CHB:1.0;1.0, JPT:0.93;0.81 FUNCTIONAL_SNP rs6469789 chr8 119960661 Intron 5b 17131 CEU:1.0;0.894, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11573829 chr8 119959623 Intron 5b 18169 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4242592 chr8 119968975 Intergenic 5b 8817 CEU:1.0;0.928, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4567065 chr8 120008274 Intron 6 30482 CEU:1.0;0.928, CHB:0.945;0.848, JPT:1.0;0.933 FUNCTIONAL_SNP rs6469801 chr8 120025675 Intron 6 47883 CEU:0.959;0.822, CHB:0.921;0.547, JPT:0.932;0.868 FUNCTIONAL_SNP rs6469804 chr8 120044829 Intron 6 67037 CEU:0.958;0.815, CHB:0.915;0.505, JPT:0.931;0.867 FUNCTIONAL_SNP rs7822098 chr8 120020129 Intron 6 42337 CEU:0.953;0.867, CHB:0.918;0.535, JPT:0.906;0.821 FUNCTIONAL_SNP rs13262276 chr8 120033918 Intron 6 56126 CEU:0.958;0.815, CHB:0.915;0.505, JPT:0.931;0.867 FUNCTIONAL_SNP rs6996754 chr8 120034870 Intron 6 57078 CEU:0.959;0.821, CHB:0.92;0.521, JPT:0.932;0.868 FUNCTIONAL_SNP rs4354338 chr8 120016060 Intron 6 38268 CEU:0.958;0.815, CHB:0.915;0.505, JPT:0.931;0.867 FUNCTIONAL_SNP rs7010267 chr8 119946656 Intron 6 31136 CEU:1.0;0.889, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs10101385 chr8 119923850 Intergenic 6 53942 CEU:0.925;0.856, CHB:1.0;1.0, JPT:0.93;0.81 FUNCTIONAL_SNP rs7013203 chr8 120017159 Intron 6 39367 CEU:0.958;0.815, CHB:0.915;0.505, JPT:0.931;0.867 FUNCTIONAL_SNP rs4618726 chr8 120009385 Intron 6 31593 CEU:0.961;0.923, CHB:0.948;0.899, JPT:1.0;0.936 FUNCTIONAL_SNP rs4307369 chr8 120036953 Intron 6 59161 CEU:0.958;0.815, CHB:0.915;0.505, JPT:0.931;0.867 FUNCTIONAL_SNP rs1485295 chr8 120039462 Intron 6 61670 CEU:0.958;0.815, CHB:0.915;0.505, JPT:0.931;0.867 FUNCTIONAL_SNP rs4407910 chr8 119917117 Intergenic 7 60675 CEU:0.92;0.847, CHB:1.0;1.0, JPT:0.929;0.808 FUNCTIONAL_SNP rs1905777 chr8 120021840 Intron 7 44048 CEU:0.96;0.825, CHB:0.92;0.521, JPT:0.932;0.869 FUNCTIONAL_SNP rs7842942 chr8 120008587 Intron 7 30795 CEU:1.0;0.961, CHB:0.948;0.855, JPT:1.0;0.933 FUNCTIONAL_SNP rs10505348 chr8 119972696 Intergenic 7 5096 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6415470 chr8 119955111 Intron 7 22681 CEU:1.0;0.894, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13439134 chr8 119918868 Intergenic 7 58924 CEU:0.923;0.821, CHB:1.0;1.0, JPT:0.93;0.81 FUNCTIONAL_SNP rs6992497 chr8 119980069 Intergenic 7 2277 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.936 FUNCTIONAL_SNP rs7014574 chr8 119977077 Intergenic 7 715 CEU:0.957;0.844, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2326193 chr8 120029709 Intron 7 51917 CEU:0.957;0.811, CHB:0.92;0.521, JPT:0.932;0.869 FUNCTIONAL_SNP rs7463176 chr8 119957625 Intron 7 20167 CEU:1.0;0.894, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4355801 chr8 119923873 Intergenic 7 53919 CEU:0.92;0.847, CHB:1.0;1.0, JPT:0.929;0.808 FUNCTIONAL_SNP rs7010043 chr8 120011331 Intron 7 33539 CEU:0.96;0.922, CHB:0.948;0.899, JPT:1.0;0.935 FUNCTIONAL_SNP rs7006553 chr8 119970779 Intergenic 7 7013 CEU:1.0;0.928, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13264791 chr8 120013090 Intron 7 35298 CEU:1.0;0.855, CHB:0.92;0.543, JPT:0.931;0.867 FUNCTIONAL_SNP rs4319131 chr8 119947651 Intron 7 30141 CEU:1.0;0.894, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6999476 chr8 120032259 Intron 7 54467 CEU:0.958;0.815, CHB:0.915;0.505, JPT:0.931;0.867 LEAD_SNP rs2062377 chr8 120007420 Intergenic 5b ASSOCIATION 19801982 Bone mineral density (spine) 15.3979400087 TNFRSF11B - COLEC10 FUNCTIONAL_SNP rs2220189 chr8 120007708 Exon,non-coding 5b 288 CEU:1.0;0.963, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6469798 chr8 120018291 Intron 2b 10871 CEU:1.0;0.852, CHB:1.0;0.603, JPT:1.0;0.935 FUNCTIONAL_SNP rs6469796 chr8 120018042 Intron 5a 10622 CEU:1.0;0.852, CHB:1.0;0.603, JPT:1.0;0.935 FUNCTIONAL_SNP rs10955908 chr8 119904557 Intergenic 5a 102863 CEU:0.924;0.853, CHB:0.95;0.903, JPT:0.868;0.753 FUNCTIONAL_SNP rs4305930 chr8 120058021 Intron 5b 50601 CEU:1.0;0.859, CHB:1.0;0.616, JPT:1.0;0.936 FUNCTIONAL_SNP rs12682278 chr8 120032328 Intron 5b 24908 CEU:1.0;0.852, CHB:1.0;0.603, JPT:1.0;0.935 FUNCTIONAL_SNP rs13277230 chr8 119922993 Intergenic 5b 84427 CEU:0.96;0.887, CHB:0.949;0.9, JPT:0.868;0.753 FUNCTIONAL_SNP rs11573829 chr8 119959623 Intron 5b 47797 CEU:1.0;0.852, CHB:0.948;0.899, JPT:1.0;0.935 FUNCTIONAL_SNP rs4242592 chr8 119968975 Intergenic 5b 38445 CEU:1.0;0.892, CHB:0.95;0.903, JPT:1.0;0.936 FUNCTIONAL_SNP rs10955919 chr8 120020918 Intron 5b 13498 CEU:1.0;0.828, CHB:1.0;0.616, JPT:1.0;0.936 FUNCTIONAL_SNP rs6469789 chr8 119960661 Intron 5b 46759 CEU:1.0;0.859, CHB:0.95;0.903, JPT:1.0;0.936 FUNCTIONAL_SNP rs4567065 chr8 120008274 Intron 6 854 CEU:1.0;0.963, CHB:1.0;0.949, JPT:1.0;1.0, YRI:0.732;0.536 FUNCTIONAL_SNP rs7016585 chr8 120030098 Intron 6 22678 CEU:1.0;0.818, CHB:1.0;0.603, JPT:1.0;0.935 FUNCTIONAL_SNP rs6469801 chr8 120025675 Intron 6 18255 CEU:1.0;0.857, CHB:1.0;0.644, JPT:1.0;0.936 FUNCTIONAL_SNP rs6469804 chr8 120044829 Intron 6 37409 CEU:1.0;0.852, CHB:1.0;0.603, JPT:1.0;0.935 FUNCTIONAL_SNP rs2062375 chr8 119977792 Intergenic 6 29628 CEU:1.0;0.963, CHB:0.95;0.903, JPT:1.0;0.936 FUNCTIONAL_SNP rs7822098 chr8 120020129 Intron 6 12709 CEU:1.0;0.91, CHB:1.0;0.603, JPT:1.0;0.913 FUNCTIONAL_SNP rs13262276 chr8 120033918 Intron 6 26498 CEU:1.0;0.852, CHB:1.0;0.603, JPT:1.0;0.935 FUNCTIONAL_SNP rs6996754 chr8 120034870 Intron 6 27450 CEU:1.0;0.857, CHB:1.0;0.616, JPT:1.0;0.936 FUNCTIONAL_SNP rs4354338 chr8 120016060 Intron 6 8640 CEU:1.0;0.852, CHB:1.0;0.603, JPT:1.0;0.935 FUNCTIONAL_SNP rs7010267 chr8 119946656 Intron 6 60764 CEU:1.0;0.852, CHB:0.946;0.851, JPT:1.0;0.935 FUNCTIONAL_SNP rs10101385 chr8 119923850 Intergenic 6 83570 CEU:0.961;0.889, CHB:0.95;0.903, JPT:0.868;0.753 FUNCTIONAL_SNP rs7013203 chr8 120017159 Intron 6 9739 CEU:1.0;0.852, CHB:1.0;0.603, JPT:1.0;0.935 FUNCTIONAL_SNP rs4618726 chr8 120009385 Intron 6 1965 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.866;0.749 FUNCTIONAL_SNP rs7017881 chr8 120047857 Intron 6 40437 CEU:1.0;0.818, CHB:1.0;0.603, JPT:0.934;0.872 FUNCTIONAL_SNP rs4307369 chr8 120036953 Intron 6 29533 CEU:1.0;0.852, CHB:1.0;0.603, JPT:1.0;0.935 FUNCTIONAL_SNP rs1485295 chr8 120039462 Intron 6 32042 CEU:1.0;0.852, CHB:1.0;0.603, JPT:1.0;0.935 FUNCTIONAL_SNP rs4407910 chr8 119917117 Intergenic 7 90303 CEU:0.959;0.883, CHB:0.948;0.899, JPT:0.866;0.75 FUNCTIONAL_SNP rs1905777 chr8 120021840 Intron 7 14420 CEU:1.0;0.859, CHB:1.0;0.616, JPT:1.0;0.936 FUNCTIONAL_SNP rs7842942 chr8 120008587 Intron 7 1167 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10505348 chr8 119972696 Intergenic 7 34724 CEU:1.0;0.887, CHB:0.948;0.899, JPT:1.0;0.935 FUNCTIONAL_SNP rs6415470 chr8 119955111 Intron 7 52309 CEU:1.0;0.859, CHB:0.95;0.903, JPT:1.0;0.936 FUNCTIONAL_SNP rs13439134 chr8 119918868 Intergenic 7 88552 CEU:0.924;0.853, CHB:0.95;0.903, JPT:0.868;0.753 FUNCTIONAL_SNP rs6469794 chr8 120016099 Intron 7 8679 CEU:0.957;0.811, CHB:1.0;0.566, JPT:1.0;0.935 FUNCTIONAL_SNP rs6992497 chr8 119980069 Intergenic 7 27351 CEU:1.0;0.963, CHB:0.95;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs7014574 chr8 119977077 Intergenic 7 30343 CEU:0.955;0.804, CHB:0.948;0.899, JPT:1.0;0.932 FUNCTIONAL_SNP rs2326193 chr8 120029709 Intron 7 22289 CEU:1.0;0.849, CHB:1.0;0.616, JPT:1.0;0.936 FUNCTIONAL_SNP rs13250753 chr8 119906692 Intergenic 7 100728 CEU:0.913;0.834, CHB:0.938;0.88, JPT:0.837;0.648 FUNCTIONAL_SNP rs7463176 chr8 119957625 Intron 7 49795 CEU:1.0;0.859, CHB:0.95;0.903, JPT:1.0;0.936 FUNCTIONAL_SNP rs4355801 chr8 119923873 Intergenic 7 83547 CEU:0.959;0.883, CHB:0.948;0.899, JPT:0.866;0.75 FUNCTIONAL_SNP rs7010043 chr8 120011331 Intron 7 3911 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.865;0.748 FUNCTIONAL_SNP rs7006553 chr8 119970779 Intergenic 7 36641 CEU:1.0;0.892, CHB:0.95;0.903, JPT:1.0;0.936 FUNCTIONAL_SNP rs13264791 chr8 120013090 Intron 7 5670 CEU:1.0;0.818, CHB:0.92;0.543, JPT:1.0;0.935 FUNCTIONAL_SNP rs4319131 chr8 119947651 Intron 7 59769 CEU:1.0;0.859, CHB:0.95;0.903, JPT:1.0;0.936 FUNCTIONAL_SNP rs10086835 chr8 120040181 Intron 7 32761 CEU:1.0;0.828, CHB:1.0;0.606, JPT:1.0;0.936 FUNCTIONAL_SNP rs6999476 chr8 120032259 Intron 7 24839 CEU:1.0;0.852, CHB:1.0;0.603, JPT:1.0;0.935 FUNCTIONAL_SNP rs4327884 chr8 120019593 Intron 7 12173 CEU:1.0;0.812, JPT:0.929;0.759 FUNCTIONAL_SNP rs6984675 chr8 120045227 Intron 7 37807 CEU:1.0;0.828 LEAD_SNP rs11995824 chr8 120012700 Intron 7 ASSOCIATION 19801982 Bone mineral density (hip) 8.15490195999 TNFRSF11B - COLEC10 FUNCTIONAL_SNP rs6469797 chr8 120018159 Intron 4 5459 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs4422806 chr8 120022768 Intron 5b 10068 CEU:1.0;0.845, CHB:0.944;0.891, JPT:1.0;1.0 FUNCTIONAL_SNP rs4416847 chr8 120009258 Intron 5b 3442 CEU:1.0;0.963 FUNCTIONAL_SNP rs7013722 chr8 120047621 Intron 5b 34921 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs4335155 chr8 120013469 Intron 6 769 CEU:1.0;0.828, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs4424291 chr8 120018735 Intron 6 6035 CEU:1.0;0.818, CHB:0.95;0.902, JPT:1.0;1.0 FUNCTIONAL_SNP rs1905779 chr8 120041165 Intron 6 28465 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs6469805 chr8 120048149 Intron 6 35449 CEU:1.0;0.86, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs4273881 chr8 120016355 Intron 6 3655 CEU:1.0;0.815, CHB:0.95;0.902, JPT:1.0;1.0 FUNCTIONAL_SNP rs10098408 chr8 120039721 Intron 6 27021 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs13264172 chr8 120012861 Intron 6 161 CEU:1.0;0.963, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7813486 chr8 120032525 Intron 6 19825 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs4615609 chr8 120035493 Intron 6 22793 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs6469792 chr8 120008371 Intron 6 4329 CEU:1.0;0.961, CHB:1.0;0.68, JPT:1.0;0.952 FUNCTIONAL_SNP rs1485312 chr8 120043935 Intron 7 31235 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs2062376 chr8 120010009 Intron 7 2691 CEU:1.0;0.963, CHB:1.0;0.691, JPT:1.0;0.954 FUNCTIONAL_SNP rs4424296 chr8 120013276 Intron 7 576 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs1905783 chr8 120014836 Intron 7 2136 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs1905784 chr8 120014623 Intron 7 1923 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs10505351 chr8 120033998 Intron 7 21298 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs10955924 chr8 120053343 Intron 7 40643 CEU:1.0;0.818, CHB:0.95;0.902, JPT:1.0;1.0 FUNCTIONAL_SNP rs6469795 chr8 120016469 Intron 7 3769 CEU:1.0;0.818, CHB:0.95;0.902, JPT:1.0;1.0 FUNCTIONAL_SNP rs7018198 chr8 120048033 Intron 7 35333 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs7017691 chr8 120023414 Intron 7 10714 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs4401893 chr8 120044383 Intron 7 31683 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs7013731 chr8 120038365 Intron 7 25665 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs7004052 chr8 120031029 Intron 7 18329 CEU:1.0;0.828, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs6993813 chr8 120052238 Intron 7 39538 CEU:1.0;0.852, CHB:0.95;0.902, JPT:1.0;1.0 FUNCTIONAL_SNP rs9650075 chr8 120017079 Intron 7 4379 CEU:1.0;0.818, CHB:0.95;0.902, JPT:1.0;1.0 LEAD_SNP rs6469804 chr8 120044829 Intron 6 ASSOCIATION 18445777 Bone mineral density (spine) 14.15490196 TNFRSF11B - COLEC10 LEAD_SNP rs6993813 chr8 120052238 Intron 7 ASSOCIATION 18445777 Bone mineral density (hip) 10.5228787453 TNFRSF11B - COLEC10 FUNCTIONAL_SNP rs7013722 chr8 120047621 Intron 5b 4617 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs4424291 chr8 120018735 Intron 6 33503 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs1905779 chr8 120041165 Intron 6 11073 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs6469805 chr8 120048149 Intron 6 4089 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4273881 chr8 120016355 Intron 6 35883 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs10098408 chr8 120039721 Intron 6 12517 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs7813486 chr8 120032525 Intron 6 19713 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs4615609 chr8 120035493 Intron 6 16745 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs1485312 chr8 120043935 Intron 7 8303 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs1905783 chr8 120014836 Intron 7 37402 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs1905784 chr8 120014623 Intron 7 37615 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs10505351 chr8 120033998 Intron 7 18240 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs10955924 chr8 120053343 Intron 7 1105 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs7018198 chr8 120048033 Intron 7 4205 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs4401893 chr8 120044383 Intron 7 7855 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs7013731 chr8 120038365 Intron 7 13873 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs7004052 chr8 120031029 Intron 7 21209 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs9650075 chr8 120017079 Intron 7 35159 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 LEAD_SNP rs1364705 chr8 120224806 Intron 6 ASSOCIATION 19668339 Hippocampal atrophy 5.04575749056 MAL2 LEAD_SNP rs11989782 chr8 121694650 Intron 5b ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 5.15490195999 SNTB1 LEAD_SNP rs17232789 chr8 122622500 Intergenic 7 ASSOCIATION 21546767 Dialysis-related mortality 5.22184874962 RPL35AP19 - HAS2 FUNCTIONAL_SNP rs10956050 chr8 122623115 Intergenic 5b 615 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.92 LEAD_SNP rs7844723 chr8 122908503 Intron 6 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.69897000434 HAS2AS - MRPS36P3 LEAD_SNP rs907121 chr8 122963215 Intergenic 7 ASSOCIATION 20966902 Weight 5.69897000434 HAS2AS - MRPS36P3 LEAD_SNP rs2294015 chr8 124696867 Coding 5b ASSOCIATION 21046636 Event-related brain oscillations 5.04575749056 ANXA13 LEAD_SNP rs10088262 chr8 124765702 Intergenic 5b ASSOCIATION 20686608 Pancreatic cancer 5.39794000867 ANXA13 - FAM91A1 LEAD_SNP rs10481151 chr8 124831834 Intergenic 5b ASSOCIATION 19734545 Cognitive performance 6.39794000867 FAM91A1 - FER1L6 FUNCTIONAL_SNP rs10481072 chr8 124831671 Intergenic 5b 163 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10481073 chr8 124831734 Intergenic 5b 100 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10481071 chr8 124831459 Intergenic 5b 375 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6986384 chr8 124832181 Intergenic 7 347 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 LEAD_SNP rs2954021 chr8 126482077 Intergenic 7 ASSOCIATION 20864672 LDL cholesterol 7.0 TRIB1 - FAM84B FUNCTIONAL_SNP rs2001844 chr8 126478745 Intergenic 2b 3332 CEU:0.96;0.853, CHB:1.0;1.0, JPT:1.0;0.954 FUNCTIONAL_SNP rs6982636 chr8 126479315 Intergenic 2b 2762 CEU:0.957;0.846, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs2980853 chr8 126478350 Intergenic 2b 3727 CEU:0.957;0.846, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs2980856 chr8 126476379 Intergenic 2b 5698 CEU:0.957;0.846 FUNCTIONAL_SNP rs2001945 chr8 126477978 Intergenic 4 4099 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6982502 chr8 126479362 Intergenic 4 2715 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2980871 chr8 126488930 Intergenic 5b 6853 CEU:0.958;0.818 FUNCTIONAL_SNP rs2980875 chr8 126481747 Intergenic 5b 330 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs2954019 chr8 126477759 Intergenic 5b 4318 CEU:0.96;0.853 FUNCTIONAL_SNP rs2954022 chr8 126482621 Intergenic 5b 544 CEU:1.0;0.891, CHB:1.0;1.0, JPT:1.0;0.954 FUNCTIONAL_SNP rs17321515 chr8 126486409 Intergenic 5b 4332 CEU:0.957;0.846, CHB:1.0;1.0, JPT:1.0;0.907 FUNCTIONAL_SNP rs2954031 chr8 126491733 Intergenic 5b 9656 CEU:1.0;0.857, CHB:1.0;0.866, JPT:1.0;0.829 FUNCTIONAL_SNP rs10808546 chr8 126495818 Intergenic 5b 13741 CEU:1.0;0.884 FUNCTIONAL_SNP rs2980854 chr8 126477497 Intergenic 5b 4580 CEU:0.96;0.853 FUNCTIONAL_SNP rs2980869 chr8 126488250 Intergenic 6 6173 CEU:0.957;0.846, CHB:1.0;1.0, JPT:1.0;0.907 FUNCTIONAL_SNP rs2980882 chr8 126480700 Intergenic 7 1377 CEU:0.96;0.853, CHB:1.0;1.0, JPT:1.0;0.954 FUNCTIONAL_SNP rs2954029 chr8 126490972 Intergenic 7 8895 CEU:1.0;0.891, CHB:1.0;1.0, JPT:1.0;0.869 FUNCTIONAL_SNP rs2980855 chr8 126477476 Intergenic 7 4601 CEU:0.96;0.853 LEAD_SNP rs2954026 chr8 126484526 Intergenic 5b ASSOCIATION 21386085 HDL Cholesterol - Triglycerides (HDLC-TG) 8.09691001301 TRIB1 - FAM84B FUNCTIONAL_SNP rs2980867 chr8 126487691 Intergenic 4 3165 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7828113 chr8 126485467 Intergenic 4 941 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;0.948 FUNCTIONAL_SNP rs2954018 chr8 126477153 Intergenic 4 7373 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs2001845 chr8 126478644 Intergenic 4 5882 CEU:0.954;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs7846466 chr8 126485531 Intergenic 4 1005 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2980876 chr8 126481694 Intergenic 5b 2832 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2980878 chr8 126481527 Intergenic 5b 2999 CEU:1.0;1.0, CHB:1.0;0.895, JPT:1.0;1.0, YRI:1.0;0.702 FUNCTIONAL_SNP rs2980879 chr8 126481475 Intergenic 5b 3051 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2980888 chr8 126507308 Intergenic 5b 22782 CEU:0.919;0.812, CHB:0.945;0.894, JPT:1.0;0.948, YRI:1.0;0.702 FUNCTIONAL_SNP rs2954025 chr8 126484463 Intergenic 5b 63 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.946 FUNCTIONAL_SNP rs2954030 chr8 126491304 Intergenic 5b 6778 CEU:1.0;0.857, CHB:1.0;0.812, JPT:1.0;0.901 FUNCTIONAL_SNP rs2954032 chr8 126493392 Intergenic 5b 8866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.845;0.619 FUNCTIONAL_SNP rs2954033 chr8 126493746 Intergenic 5b 9220 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs2954038 chr8 126507389 Intergenic 5b 22863 CEU:0.919;0.812, CHB:0.945;0.894, JPT:1.0;0.948, YRI:1.0;0.702 FUNCTIONAL_SNP rs2980859 chr8 126499429 Intergenic 5b 14903 CEU:1.0;0.962, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.702 FUNCTIONAL_SNP rs2980862 chr8 126484638 Intergenic 5b 112 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2980880 chr8 126480972 Intergenic 6 3554 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4351435 chr8 126499878 Intergenic 6 15352 CEU:0.957;0.916, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs2954020 chr8 126481952 Intergenic 7 2574 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4871603 chr8 126480367 Intergenic 7 4159 CEU:0.954;0.803, CHB:1.0;1.0, JPT:1.0;0.946 LEAD_SNP rs17321515 chr8 126486409 Intergenic 5b ASSOCIATION 18193044 Triglycerides 16.3979400087 TRIB1 - FAM84B ASSOCIATION 18193043 Triglycerides 12.15490196 TRIB1 - FAM84B FUNCTIONAL_SNP rs2980869 chr8 126488250 Intergenic 6 1841 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2954029 chr8 126490972 Intergenic 7 ASSOCIATION 20864672 Triglycerides 10.6989700043 TRIB1 - FAM84B ASSOCIATION 19060906 Triglycerides 18.5228787453 TRIB1 - FAM84B FUNCTIONAL_SNP rs2001844 chr8 126478745 Intergenic 2b 12227 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;0.912, YRI:0.952;0.579 FUNCTIONAL_SNP rs6982636 chr8 126479315 Intergenic 2b 11657 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.953, YRI:0.949;0.621 FUNCTIONAL_SNP rs2980853 chr8 126478350 Intergenic 2b 12622 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.953, YRI:0.946;0.551 FUNCTIONAL_SNP rs2980856 chr8 126476379 Intergenic 2b 14593 CEU:1.0;0.96 FUNCTIONAL_SNP rs2001945 chr8 126477978 Intergenic 4 12994 CEU:1.0;0.818, CHB:1.0;1.0, JPT:1.0;0.908 FUNCTIONAL_SNP rs6982502 chr8 126479362 Intergenic 4 11610 CEU:1.0;0.818, CHB:1.0;1.0, JPT:1.0;0.908 FUNCTIONAL_SNP rs2980871 chr8 126488930 Intergenic 5b 2042 CEU:0.961;0.923 FUNCTIONAL_SNP rs2980875 chr8 126481747 Intergenic 5b 9225 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.664 FUNCTIONAL_SNP rs2954019 chr8 126477759 Intergenic 5b 13213 CEU:1.0;0.962, YRI:0.738;0.502 FUNCTIONAL_SNP rs2954022 chr8 126482621 Intergenic 5b 8351 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.912, YRI:1.0;0.737 FUNCTIONAL_SNP rs17321515 chr8 126486409 Intergenic 5b 4563 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2954031 chr8 126491733 Intergenic 5b 761 CEU:1.0;0.962, CHB:1.0;0.834, JPT:1.0;0.955, YRI:1.0;0.711 FUNCTIONAL_SNP rs10808546 chr8 126495818 Intergenic 5b 4846 CEU:1.0;0.959 FUNCTIONAL_SNP rs2980854 chr8 126477497 Intergenic 5b 13475 CEU:1.0;0.962, YRI:0.738;0.502 FUNCTIONAL_SNP rs2980869 chr8 126488250 Intergenic 6 2722 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2980882 chr8 126480700 Intergenic 7 10272 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;0.912, YRI:1.0;0.686 FUNCTIONAL_SNP rs2954021 chr8 126482077 Intergenic 7 8895 CEU:1.0;0.891, CHB:1.0;1.0, JPT:1.0;0.869 FUNCTIONAL_SNP rs2980855 chr8 126477476 Intergenic 7 13496 CEU:1.0;0.962, YRI:0.738;0.502 LEAD_SNP rs2954033 chr8 126493746 Intergenic 5b ASSOCIATION 21386085 Triglycerides-Blood Pressure (TG-BP) 8.04575749056 TRIB1 - FAM84B FUNCTIONAL_SNP rs2980867 chr8 126487691 Intergenic 4 6055 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs7828113 chr8 126485467 Intergenic 4 8279 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs2954018 chr8 126477153 Intergenic 4 16593 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs2001845 chr8 126478644 Intergenic 4 15102 CEU:0.954;0.91, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs7846466 chr8 126485531 Intergenic 4 8215 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.826 FUNCTIONAL_SNP rs2980876 chr8 126481694 Intergenic 5b 12052 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2980878 chr8 126481527 Intergenic 5b 12219 CEU:1.0;1.0, CHB:1.0;0.895, JPT:1.0;1.0, YRI:1.0;0.826 FUNCTIONAL_SNP rs2980879 chr8 126481475 Intergenic 5b 12271 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2980888 chr8 126507308 Intergenic 5b 13562 CEU:0.919;0.812, CHB:0.945;0.894, JPT:1.0;0.947, YRI:1.0;0.826 FUNCTIONAL_SNP rs2954025 chr8 126484463 Intergenic 5b 9283 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs2954026 chr8 126484526 Intergenic 5b 9220 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs2954030 chr8 126491304 Intergenic 5b 2442 CEU:1.0;0.857, CHB:1.0;0.812, JPT:1.0;0.947 FUNCTIONAL_SNP rs2954032 chr8 126493392 Intergenic 5b 354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs2954038 chr8 126507389 Intergenic 5b 13643 CEU:0.919;0.812, CHB:0.945;0.894, JPT:1.0;0.947, YRI:1.0;0.826 FUNCTIONAL_SNP rs2980859 chr8 126499429 Intergenic 5b 5683 CEU:1.0;0.962, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.826 FUNCTIONAL_SNP rs2980862 chr8 126484638 Intergenic 5b 9108 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2980880 chr8 126480972 Intergenic 6 12774 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4351435 chr8 126499878 Intergenic 6 6132 CEU:0.957;0.916, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs2954020 chr8 126481952 Intergenic 7 11794 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4871603 chr8 126480367 Intergenic 7 13379 CEU:0.954;0.803, CHB:1.0;1.0, JPT:1.0;0.945 LEAD_SNP rs6987702 chr8 126504726 Intergenic 6 ASSOCIATION 19060911 Cholesterol, total 8.52287874528 TRIB1 - FAM84B ASSOCIATION 19060911 LDL cholesterol 5.52287874528 TRIB1 - FAM84B LEAD_SNP rs2954038 chr8 126507389 Intergenic 5b ASSOCIATION 20339536 Response to statin therapy 5.15490195999 TRIB1 - FAM84B FUNCTIONAL_SNP rs7846466 chr8 126485531 Intergenic 4 21858 CEU:0.919;0.812, CHB:0.944;0.845, JPT:1.0;0.948, YRI:1.0;0.655 FUNCTIONAL_SNP rs2980876 chr8 126481694 Intergenic 5b 25695 CEU:0.955;0.837, CHB:0.943;0.889, JPT:1.0;0.946 FUNCTIONAL_SNP rs2980878 chr8 126481527 Intergenic 5b 25862 CEU:0.919;0.812, CHB:0.94;0.791, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs2980879 chr8 126481475 Intergenic 5b 25914 CEU:0.959;0.85, CHB:0.945;0.894, JPT:1.0;0.948 FUNCTIONAL_SNP rs2980888 chr8 126507308 Intergenic 5b 81 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2954026 chr8 126484526 Intergenic 5b 22863 CEU:0.919;0.812, CHB:0.945;0.894, JPT:1.0;0.948, YRI:1.0;0.702 FUNCTIONAL_SNP rs2954033 chr8 126493746 Intergenic 5b 13643 CEU:0.919;0.812, CHB:0.945;0.894, JPT:1.0;0.947, YRI:1.0;0.826 FUNCTIONAL_SNP rs2980859 chr8 126499429 Intergenic 5b 7960 CEU:0.959;0.85, CHB:1.0;0.947, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs2980880 chr8 126480972 Intergenic 6 26417 CEU:0.959;0.85, CHB:0.945;0.894, JPT:1.0;0.948 FUNCTIONAL_SNP rs2954020 chr8 126481952 Intergenic 7 25437 CEU:0.955;0.837, CHB:0.943;0.889, JPT:1.0;0.946 LEAD_SNP rs1551398 chr8 126540051 Intron 4 ASSOCIATION 18587394 Crohn's disease 8.30102999566 TRIB1 - FAM84B FUNCTIONAL_SNP rs4871611 chr8 126537570 Intron 4 2481 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1016343 chr8 128093297 Intron 4 ASSOCIATION 21743057 Prostate cancer 9.39794000867 FAM84B - SRRM1P1 ASSOCIATION 18264097 Prostate cancer 7.0 FAM84B - SRRM1P1 FUNCTIONAL_SNP rs7841060 chr8 128096477 Intergenic 5b 3180 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.611 LEAD_SNP rs13252298 chr8 128095156 Intergenic 7 ASSOCIATION 21743057 Prostate cancer 5.39794000867 FAM84B - SRRM1P1 FUNCTIONAL_SNP rs7844454 chr8 128102501 Intergenic 6 7345 CEU:1.0;0.875, CHB:1.0;0.949, JPT:1.0;1.0 LEAD_SNP rs1456315 chr8 128103937 Intergenic 5a ASSOCIATION 20676098 Prostate cancer 28.6989700043 SRRM1P1 - POU5F1B LEAD_SNP rs16901979 chr8 128124916 Intergenic 6 ASSOCIATION 19767754 Prostate cancer 13.5228787453 SRRM1P1 - POU5F1B ASSOCIATION 17401366 Prostate cancer 12.0 SRRM1P1 - POU5F1B FUNCTIONAL_SNP rs6987723 chr8 128112859 Intergenic 4 12057 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10453084 chr8 128112779 Intergenic 4 12137 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs16901984 chr8 128130961 Intergenic 4 6045 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs16901970 chr8 128112715 Intergenic 5a 12201 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs7844219 chr8 128118815 Intergenic 5a 6101 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.888 FUNCTIONAL_SNP rs1551512 chr8 128124126 Intergenic 5b 790 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs16901950 chr8 128107243 Intergenic 5b 17673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs16901952 chr8 128107270 Intergenic 5b 17646 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.5 FUNCTIONAL_SNP rs7817677 chr8 128125504 Intergenic 5b 588 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.533 FUNCTIONAL_SNP rs7001069 chr8 128110646 Intergenic 5b 14270 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs7013255 chr8 128130487 Intergenic 6 5571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6983561 chr8 128106880 Intergenic 6 18036 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.765 FUNCTIONAL_SNP rs7824785 chr8 128114710 Intergenic 6 10206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs7010450 chr8 128108679 Intergenic 6 16237 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs16901953 chr8 128108229 Intergenic 6 16687 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs16901959 chr8 128109530 Intergenic 6 15386 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;0.535 FUNCTIONAL_SNP rs16901969 chr8 128112097 Intergenic 6 12819 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs6988257 chr8 128111456 Intergenic 6 13460 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs6987640 chr8 128113028 Intergenic 6 11888 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs10505483 chr8 128125195 Intergenic 7 279 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6989838 chr8 128129372 Intergenic 7 4456 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16901948 chr8 128107101 Intergenic 7 17815 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs16901949 chr8 128107153 Intergenic 7 17763 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs7824451 chr8 128114461 Intergenic 7 10455 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs7830341 chr8 128109930 Intergenic 7 14986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16901966 chr8 128110252 Intergenic 7 14664 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs16901967 chr8 128110277 Intergenic 7 14639 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs6470498 chr8 128115720 Intergenic 7 9196 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.512 FUNCTIONAL_SNP rs12682344 chr8 128106784 Intergenic 7 18132 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2456449 chr8 128192981 Intergenic 5b ASSOCIATION 20062064 Chronic lymphocytic leukemia 9.09691001301 SRRM1P1 - POU5F1B FUNCTIONAL_SNP rs2456461 chr8 128182451 Intergenic 3a 10530 CEU:0.955;0.806, CHB:1.0;0.687, JPT:0.929;0.56 FUNCTIONAL_SNP rs1021954 chr8 128203857 Intron 4 10876 CEU:1.0;0.848, CHB:1.0;0.954, JPT:0.765;0.53 FUNCTIONAL_SNP rs2445610 chr8 128197088 Intergenic 4 4107 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2466021 chr8 128183187 Intergenic 4 9794 CEU:1.0;0.848, CHB:1.0;0.656, JPT:1.0;0.618 FUNCTIONAL_SNP rs1964690 chr8 128193606 Intergenic 5a 625 CEU:1.0;0.848, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2456453 chr8 128201359 Intron 5b 8378 CEU:0.955;0.806, CHB:0.952;0.906, JPT:0.772;0.54 FUNCTIONAL_SNP rs2445606 chr8 128178647 Intergenic 5b 14334 CEU:1.0;0.848, CHB:1.0;0.656, JPT:0.929;0.56 FUNCTIONAL_SNP rs2124599 chr8 128181903 Intergenic 6 11078 CEU:1.0;0.848, CHB:1.0;0.656, JPT:0.929;0.56 FUNCTIONAL_SNP rs1021955 chr8 128203973 Intron 7 10992 CEU:1.0;0.848, CHB:1.0;0.954 FUNCTIONAL_SNP rs2466025 chr8 128189374 Intergenic 7 3607 CEU:1.0;0.848, CHB:1.0;0.656, JPT:1.0;0.618 LEAD_SNP rs16902094 chr8 128320346 Intron 5b ASSOCIATION 19767754 Prostate cancer 14.2218487496 SRRM1P1 - POU5F1B LEAD_SNP rs445114 chr8 128323181 Intron 5b ASSOCIATION 21743057 Prostate cancer 6.30102999566 SRRM1P1 - POU5F1B ASSOCIATION 19767754 Prostate cancer 9.30102999566 SRRM1P1 - POU5F1B FUNCTIONAL_SNP rs620861 chr8 128335673 Intron 5a 12492 CEU:1.0;1.0, CHB:1.0;0.869, JPT:0.835;0.635 FUNCTIONAL_SNP rs443053 chr8 128335796 Intron 5b 12615 CEU:1.0;1.0 FUNCTIONAL_SNP rs13256367 chr8 128334900 Intron 5b 11719 CEU:1.0;0.958, CHB:1.0;0.502 LEAD_SNP rs13281615 chr8 128355618 Intron 7 ASSOCIATION 17529967 Breast cancer 11.3010299957 SRRM1P1 - POU5F1B LEAD_SNP rs1562430 chr8 128387852 Intron 5b ASSOCIATION 21263130 Breast cancer 10.5228787453 SRRM1P1 - POU5F1B ASSOCIATION 20453838 Breast cancer 6.22184874962 SRRM1P1 - POU5F1B FUNCTIONAL_SNP rs5022926 chr8 128366829 Intron 5a 21023 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs13249993 chr8 128350515 Intron 5b 37337 CEU:0.955;0.837, JPT:1.0;0.586 FUNCTIONAL_SNP rs7002826 chr8 128364271 Intron 5b 23581 CEU:1.0;1.0, CHB:1.0;0.686, JPT:1.0;0.842, YRI:1.0;0.801 FUNCTIONAL_SNP rs7815245 chr8 128383597 Intron 5b 4255 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs10098985 chr8 128355019 Intron 5b 32833 CEU:1.0;0.957, CHB:1.0;0.642, JPT:1.0;0.778, YRI:1.0;0.742 FUNCTIONAL_SNP rs11777532 chr8 128350608 Intron 5b 37244 CEU:1.0;0.875, CHB:1.0;0.851, JPT:1.0;0.915 FUNCTIONAL_SNP rs10447995 chr8 128357924 Intron 6 29928 CEU:0.956;0.875, JPT:1.0;0.586, YRI:0.734;0.539 FUNCTIONAL_SNP rs16902126 chr8 128382357 Intron 6 5495 CEU:1.0;0.958, CHB:1.0;0.502, JPT:1.0;0.626, YRI:1.0;0.621 FUNCTIONAL_SNP rs9283954 chr8 128375370 Intron 6 12482 CEU:1.0;0.875, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs7838714 chr8 128343948 Intron 6 43904 CEU:0.948;0.855, YRI:1.0;0.834 FUNCTIONAL_SNP rs7014657 chr8 128361241 Intron 7 26611 CEU:1.0;0.955, CHB:1.0;0.602, JPT:1.0;0.842, YRI:1.0;0.764 FUNCTIONAL_SNP rs7831303 chr8 128376732 Intron 7 11120 CEU:1.0;0.957, CHB:1.0;0.706, JPT:1.0;0.842, YRI:1.0;0.797 FUNCTIONAL_SNP rs7815100 chr8 128376801 Intron 7 11051 CEU:1.0;0.958, CHB:1.0;0.735, JPT:1.0;0.842, YRI:1.0;0.801 FUNCTIONAL_SNP rs7842494 chr8 128366570 Intron 7 21282 CEU:1.0;0.916, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs7845452 chr8 128379409 Intron 7 8443 CEU:1.0;0.957, CHB:1.0;0.502, JPT:1.0;0.626, YRI:0.82;0.502 FUNCTIONAL_SNP rs2392780 chr8 128388025 Intron 7 173 CEU:1.0;1.0, JPT:0.895;0.537, YRI:1.0;0.645 FUNCTIONAL_SNP rs9693143 chr8 128378025 Intron 7 9827 CEU:1.0;1.0, CHB:1.0;0.735, JPT:1.0;0.842, YRI:1.0;0.801 FUNCTIONAL_SNP rs7007568 chr8 128364906 Intron 7 22946 CEU:1.0;1.0, CHB:1.0;0.686, JPT:1.0;0.842, YRI:1.0;0.801 FUNCTIONAL_SNP rs7015780 chr8 128389507 Intron 7 1655 CEU:1.0;0.957, CHB:1.0;0.916, JPT:1.0;0.91, YRI:1.0;0.801 FUNCTIONAL_SNP rs6988647 chr8 128377656 Intron 7 10196 CEU:1.0;1.0, CHB:1.0;0.735, JPT:1.0;0.842, YRI:1.0;0.801 FUNCTIONAL_SNP rs7826557 chr8 128345731 Intron 7 42121 CEU:1.0;0.957, CHB:0.911;0.764, JPT:1.0;0.915 LEAD_SNP rs10505477 chr8 128407443 Intron 5b ASSOCIATION 17618283 Colorectal cancer 10.5228787453 SRRM1P1 - POU5F1B LEAD_SNP rs6983267 chr8 128413305 Intron 4 ASSOCIATION 21743057 Prostate cancer 5.04575749056 SRRM1P1 - POU5F1B ASSOCIATION 21242260 Colorectal cancer 7.69897000434 SRRM1P1 - POU5F1B ASSOCIATION 18372905 Colorectal cancer 10.15490196 SRRM1P1 - POU5F1B ASSOCIATION 18264097 Prostate cancer 12.0457574906 SRRM1P1 - POU5F1B ASSOCIATION 18264096 Prostate cancer 11.15490196 SRRM1P1 - POU5F1B ASSOCIATION 17618284 Colorectal cancer 14.0 SRRM1P1 - POU5F1B ASSOCIATION 17401363 Prostate cancer 12.0457574906 SRRM1P1 - POU5F1B FUNCTIONAL_SNP rs10505477 chr8 128407443 Intron 5b 5862 CEU:1.0;0.924, CHB:1.0;0.951, JPT:1.0;1.0 LEAD_SNP rs7014346 chr8 128424792 Intron 7 ASSOCIATION 18372901 Colorectal cancer 25.0457574906 SRRM1P1 - POU5F1B LEAD_SNP rs1447295 chr8 128485038 Intron 5a ASSOCIATION 19767754 Prostate cancer 18.6989700043 POU5F1B - MYC ASSOCIATION 17401366 Prostate cancer 17.2218487496 POU5F1B - MYC ASSOCIATION 17401363 Prostate cancer 13.6989700043 POU5F1B - MYC FUNCTIONAL_SNP rs10090154 chr8 128532137 Intergenic 2b 47099 CEU:1.0;1.0, JPT:1.0;0.688 FUNCTIONAL_SNP rs11986220 chr8 128531689 Intergenic 2b 46651 CEU:1.0;1.0, CHB:0.717;0.514, JPT:1.0;0.714 FUNCTIONAL_SNP rs7814837 chr8 128522202 Intergenic 4 37164 CEU:1.0;1.0, CHB:0.837;0.531, JPT:1.0;0.93 FUNCTIONAL_SNP rs7812429 chr8 128520173 Intergenic 4 35135 CEU:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs4314621 chr8 128518015 Intergenic 4 32977 CEU:1.0;1.0, CHB:0.858;0.646, JPT:1.0;0.93 FUNCTIONAL_SNP rs7812894 chr8 128520479 Intergenic 5b 35441 CEU:1.0;1.0, CHB:0.837;0.531, JPT:1.0;0.93 FUNCTIONAL_SNP rs7818556 chr8 128484399 Intron 5b 639 CEU:1.0;1.0, CHB:0.874;0.764, JPT:1.0;1.0, YRI:1.0;0.913 FUNCTIONAL_SNP rs7832031 chr8 128516952 Intergenic 5b 31914 CEU:1.0;1.0, CHB:0.813;0.559, JPT:0.916;0.84 FUNCTIONAL_SNP rs1447296 chr8 128495359 Intergenic 6 10321 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.93, YRI:1.0;0.543 FUNCTIONAL_SNP rs7837688 chr8 128539360 Intergenic 6 54322 CEU:1.0;0.848, JPT:0.911;0.662 FUNCTIONAL_SNP rs4582524 chr8 128528435 Intergenic 6 43397 CEU:1.0;1.0, JPT:1.0;0.786 FUNCTIONAL_SNP rs7826179 chr8 128489199 Intron 7 4161 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10109700 chr8 128485964 Intron 7 926 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7824776 chr8 128533442 Intergenic 7 48404 CEU:1.0;0.824, JPT:1.0;0.732 FUNCTIONAL_SNP rs13255059 chr8 128530616 Intergenic 7 45578 CEU:1.0;1.0, JPT:1.0;0.787 FUNCTIONAL_SNP rs4242382 chr8 128517573 Intergenic 7 32535 CEU:1.0;1.0, CHB:0.858;0.646, JPT:1.0;0.93 FUNCTIONAL_SNP rs4242384 chr8 128518554 Intergenic 7 33516 CEU:1.0;1.0, CHB:0.837;0.531, JPT:1.0;0.93 FUNCTIONAL_SNP rs9643226 chr8 128494481 Intergenic 7 9443 CEU:1.0;1.0, CHB:1.0;0.758, JPT:1.0;0.93 FUNCTIONAL_SNP rs10808558 chr8 128501150 Intergenic 7 16112 CEU:1.0;1.0, CHB:0.858;0.645, JPT:1.0;0.93 FUNCTIONAL_SNP rs6470519 chr8 128484223 Intron 7 815 CEU:1.0;1.0, CHB:0.871;0.674, JPT:1.0;0.922, YRI:1.0;0.562 LEAD_SNP rs4242382 chr8 128517573 Intergenic 7 ASSOCIATION 18264096 Prostate cancer 18.5228787453 POU5F1B - MYC LEAD_SNP rs4242384 chr8 128518554 Intergenic 7 ASSOCIATION 21743057 Prostate cancer 15.5228787453 POU5F1B - MYC ASSOCIATION 19767753 Prostate cancer 23.6989700043 POU5F1B - MYC ASSOCIATION 18264097 Prostate cancer 15.5228787453 POU5F1B - MYC FUNCTIONAL_SNP rs10090154 chr8 128532137 Intergenic 2b 13583 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.749, YRI:1.0;0.813 FUNCTIONAL_SNP rs11986220 chr8 128531689 Intergenic 2b 13135 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;0.714 FUNCTIONAL_SNP rs7814837 chr8 128522202 Intergenic 4 3648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs7812429 chr8 128520173 Intergenic 4 1619 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs4314621 chr8 128518015 Intergenic 4 539 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1447295 chr8 128485038 Intron 5a 33516 CEU:1.0;1.0, CHB:0.837;0.531, JPT:1.0;0.93 FUNCTIONAL_SNP rs7812894 chr8 128520479 Intergenic 5b 1925 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs7818556 chr8 128484399 Intron 5b 34155 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7832031 chr8 128516952 Intergenic 5b 1602 CEU:1.0;1.0, CHB:1.0;0.822, JPT:1.0;0.919 FUNCTIONAL_SNP rs1447296 chr8 128495359 Intergenic 6 23195 CEU:1.0;1.0, CHB:0.84;0.61, JPT:1.0;1.0 FUNCTIONAL_SNP rs7837688 chr8 128539360 Intergenic 6 20806 CEU:1.0;0.848, CHB:1.0;0.758, JPT:0.914;0.715 FUNCTIONAL_SNP rs4582524 chr8 128528435 Intergenic 6 9881 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.848 FUNCTIONAL_SNP rs7826179 chr8 128489199 Intron 7 29355 CEU:1.0;1.0, CHB:0.837;0.531, JPT:1.0;0.93 FUNCTIONAL_SNP rs10109700 chr8 128485964 Intron 7 32590 CEU:1.0;1.0, JPT:1.0;0.914 FUNCTIONAL_SNP rs7824776 chr8 128533442 Intergenic 7 14888 CEU:1.0;0.824, CHB:1.0;0.73, JPT:1.0;0.787, YRI:0.934;0.728 FUNCTIONAL_SNP rs13255059 chr8 128530616 Intergenic 7 12062 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.849 FUNCTIONAL_SNP rs4242382 chr8 128517573 Intergenic 7 981 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs9643226 chr8 128494481 Intergenic 7 24073 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10808558 chr8 128501150 Intergenic 7 17404 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs6470519 chr8 128484223 Intron 7 34331 CEU:1.0;1.0, JPT:1.0;0.847 LEAD_SNP rs7837688 chr8 128539360 Intergenic 6 ASSOCIATION 20676098 Prostate cancer 25.0 POU5F1B - MYC FUNCTIONAL_SNP rs4582524 chr8 128528435 Intergenic 6 10925 CEU:1.0;0.848, CHB:1.0;0.877, JPT:0.912;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs13255059 chr8 128530616 Intergenic 7 8744 CEU:1.0;0.848, CHB:1.0;0.877, JPT:0.913;0.833, YRI:1.0;1.0 LEAD_SNP rs9642880 chr8 128718068 Intron 7 ASSOCIATION 20972438 Bladder cancer 17.6989700043 POU5F1B - MYC ASSOCIATION 20348956 Urinary bladder cancer 11.15490196 POU5F1B - MYC ASSOCIATION 18794855 Urinary bladder cancer 11.0457574906 POU5F1B - MYC LEAD_SNP rs2648875 chr8 129072161 Intron 7 ASSOCIATION 17395743 End-stage renal disease 5.69897000434 PVT1 FUNCTIONAL_SNP rs1472483 chr8 129070781 Intron 5b 1380 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 LEAD_SNP rs2608053 chr8 129075832 Intron 7 ASSOCIATION 21037568 Hodgkin's lymphoma 7.0 PVT1 FUNCTIONAL_SNP rs2720665 chr8 129076509 Intron 4 677 CEU:0.958;0.917, YRI:0.845;0.507 LEAD_SNP rs2019960 chr8 129192271 Intergenic 7 ASSOCIATION 21037568 Hodgkin's lymphoma 13.0 PVT1 - GSDMC FUNCTIONAL_SNP rs7826019 chr8 129186548 Intergenic 2a 5723 CEU:1.0;1.0, JPT:0.912;0.627, YRI:1.0;0.964 FUNCTIONAL_SNP rs6470605 chr8 129185951 Intergenic 2b 6320 CEU:1.0;1.0, JPT:0.912;0.627, YRI:1.0;0.964 FUNCTIONAL_SNP rs6987519 chr8 129187970 Intergenic 2b 4301 CEU:1.0;1.0, JPT:0.912;0.627, YRI:1.0;0.964 FUNCTIONAL_SNP rs7825733 chr8 129186425 Intergenic 4 5846 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.924, YRI:1.0;0.657 FUNCTIONAL_SNP rs6470606 chr8 129185996 Intergenic 4 6275 CEU:1.0;1.0, JPT:0.912;0.627, YRI:1.0;0.964 FUNCTIONAL_SNP rs6470607 chr8 129186069 Intergenic 4 6202 CEU:1.0;1.0, JPT:0.912;0.627, YRI:1.0;0.964 FUNCTIONAL_SNP rs13249280 chr8 129167140 Intergenic 4 25131 CEU:1.0;1.0 FUNCTIONAL_SNP rs7830477 chr8 129179788 Intergenic 4 12483 CEU:1.0;1.0, JPT:0.899;0.629, YRI:1.0;0.661 FUNCTIONAL_SNP rs7826413 chr8 129186636 Intergenic 4 5635 CEU:1.0;1.0, JPT:0.912;0.627, YRI:1.0;0.964 FUNCTIONAL_SNP rs6987197 chr8 129187748 Intergenic 5a 4523 CEU:1.0;1.0, JPT:0.912;0.627, YRI:1.0;0.964 FUNCTIONAL_SNP rs16902691 chr8 129190321 Intergenic 5b 1950 CEU:1.0;0.95, CHB:1.0;0.79, JPT:1.0;0.92, YRI:1.0;0.661 FUNCTIONAL_SNP rs7016362 chr8 129182844 Intergenic 5b 9427 CEU:1.0;1.0, YRI:1.0;0.925 FUNCTIONAL_SNP rs7826401 chr8 129176011 Intergenic 5b 16260 CEU:1.0;1.0, JPT:0.899;0.629, YRI:1.0;0.856 FUNCTIONAL_SNP rs11995854 chr8 129220073 Intergenic 6 27802 CEU:1.0;0.949, CHB:1.0;0.697, JPT:1.0;0.683 FUNCTIONAL_SNP rs4733839 chr8 129170596 Intergenic 6 21675 CEU:1.0;1.0, YRI:0.912;0.641 FUNCTIONAL_SNP rs7010390 chr8 129218859 Intergenic 6 26588 CEU:1.0;0.951, CHB:1.0;0.697, JPT:1.0;0.706 FUNCTIONAL_SNP rs12156002 chr8 129190544 Intergenic 6 1727 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.924, YRI:1.0;0.661 FUNCTIONAL_SNP rs7820652 chr8 129215374 Intergenic 6 23103 CEU:1.0;0.951, CHB:1.0;0.697, JPT:1.0;0.706 FUNCTIONAL_SNP rs16893188 chr8 129170108 Intergenic 7 22163 CEU:1.0;0.855 FUNCTIONAL_SNP rs6989829 chr8 129185399 Intergenic 7 6872 CEU:1.0;1.0, JPT:0.912;0.627, YRI:1.0;0.964 FUNCTIONAL_SNP rs2648844 chr8 129178530 Intergenic 7 13741 CEU:1.0;0.825 FUNCTIONAL_SNP rs7819665 chr8 129177769 Intergenic 7 14502 CEU:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs4733842 chr8 129174284 Intergenic 7 17987 CEU:1.0;1.0, YRI:1.0;0.861 FUNCTIONAL_SNP rs4733843 chr8 129175460 Intergenic 7 16811 CEU:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs4733844 chr8 129188425 Intergenic 7 3846 CEU:1.0;1.0, JPT:0.912;0.627, YRI:1.0;0.964 FUNCTIONAL_SNP rs4733845 chr8 129188457 Intergenic 7 3814 CEU:1.0;1.0, JPT:0.912;0.627, YRI:1.0;0.964 FUNCTIONAL_SNP rs4733598 chr8 129181647 Intergenic 7 10624 CEU:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs16902700 chr8 129198885 Intergenic 7 6614 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.661 FUNCTIONAL_SNP rs17383026 chr8 129224599 Intergenic 7 32328 CEU:1.0;0.812 FUNCTIONAL_SNP rs6996790 chr8 129204191 Intergenic 7 11920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.784;0.512 FUNCTIONAL_SNP rs6995020 chr8 129207225 Intergenic 7 14954 CEU:1.0;0.951, CHB:1.0;0.697, JPT:1.0;0.706 FUNCTIONAL_SNP rs6470604 chr8 129183642 Intergenic 7 8629 CEU:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs6470610 chr8 129217738 Intergenic 7 25467 CEU:1.0;1.0, CHB:1.0;0.648, JPT:1.0;0.741 FUNCTIONAL_SNP rs11997042 chr8 129193615 Intergenic 7 1344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13255672 chr8 129171082 Intergenic 7 21189 CEU:1.0;1.0, YRI:1.0;0.863 LEAD_SNP rs10492294 chr8 129246415 Intergenic 5a ASSOCIATION 20694011 Immunoglobulin A 5.39794000867 PVT1 - GSDMC FUNCTIONAL_SNP rs12541389 chr8 129243389 Intergenic 4 3026 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16902734 chr8 129225868 Intergenic 4 20547 CEU:1.0;1.0, CHB:1.0;0.646, JPT:0.866;0.539 FUNCTIONAL_SNP rs17383047 chr8 129227763 Intergenic 7 18652 CEU:1.0;1.0, CHB:1.0;0.841, JPT:1.0;0.788 FUNCTIONAL_SNP rs12680532 chr8 129258724 Intergenic 7 12309 CEU:1.0;0.82, CHB:1.0;0.798 LEAD_SNP rs9792269 chr8 129264589 Intergenic 7 ASSOCIATION 20190752 Celiac disease 8.52287874528 PVT1 - GSDMC FUNCTIONAL_SNP rs10808568 chr8 129264060 Intergenic 2b 529 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs2893652 chr8 129275391 Intergenic 5b 10802 CEU:1.0;0.843, CHB:1.0;1.0, JPT:1.0;0.693 FUNCTIONAL_SNP rs11777498 chr8 129276706 Intergenic 6 12117 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10956417 chr8 129275838 Intergenic 7 11249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11785587 chr8 129265325 Intergenic 7 736 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9792320 chr8 129265059 Intergenic 7 470 CEU:1.0;0.843, CHB:1.0;1.0, JPT:1.0;0.675 FUNCTIONAL_SNP rs2178885 chr8 129266948 Intergenic 7 2359 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs975730 chr8 129316014 Intergenic 7 ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 7.69897000434 PVT1 - GSDMC FUNCTIONAL_SNP rs938646 chr8 129418532 Exon,non-coding 7 102518 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs11785859 chr8 129378603 Intergenic 3a 62589 CEU:0.959;0.92, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs4269503 chr8 129311475 Intergenic 4 4539 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17801607 chr8 129399516 Intergenic 5a 83502 CEU:1.0;0.922, CHB:0.898;0.806, JPT:1.0;0.861 FUNCTIONAL_SNP rs6470624 chr8 129411679 Intergenic 5a 95665 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs2203654 chr8 129424500 Intron 5b 108486 CEU:0.956;0.875, CHB:0.898;0.806, JPT:1.0;0.711 FUNCTIONAL_SNP rs1400479 chr8 129438263 Intron 5b 122249 CEU:0.958;0.88, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs6998301 chr8 129435018 Intron 5b 119004 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs10094878 chr8 129345261 Intergenic 5b 29247 CEU:1.0;0.959, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs4129634 chr8 129340250 Intergenic 5b 24236 CEU:0.956;0.807, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs3938372 chr8 129317435 Intergenic 5b 1421 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1516969 chr8 129442568 Intergenic 5b 126554 CEU:0.958;0.882, CHB:0.895;0.801, JPT:1.0;0.81 FUNCTIONAL_SNP rs7010258 chr8 129312617 Intergenic 5b 3397 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.817;0.567 FUNCTIONAL_SNP rs6470626 chr8 129421302 Intron 5b 105288 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs1516968 chr8 129438328 Intron 5b 122314 CEU:0.958;0.918, CHB:0.893;0.798, JPT:1.0;0.76 FUNCTIONAL_SNP rs884782 chr8 129463839 Intergenic 6 147825 CEU:1.0;0.818, CHB:0.839;0.669, JPT:1.0;0.76 FUNCTIONAL_SNP rs2222136 chr8 129426284 Intron 6 110270 CEU:0.958;0.882, CHB:0.946;0.851, JPT:1.0;0.76 FUNCTIONAL_SNP rs17804358 chr8 129451697 Intergenic 6 135683 CEU:1.0;0.818, CHB:0.844;0.712, JPT:1.0;0.76 FUNCTIONAL_SNP rs10108770 chr8 129431769 Intron 6 115755 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs7839341 chr8 129407703 Intergenic 6 91689 CEU:1.0;0.922, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs938645 chr8 129419450 Intron 6 103436 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs17801517 chr8 129315568 Intergenic 6 446 CEU:1.0;1.0, CHB:1.0;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs4733864 chr8 129447587 Intergenic 6 131573 CEU:1.0;0.818, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs3922390 chr8 129328343 Intergenic 6 12329 CEU:1.0;1.0, CHB:0.947;0.853, JPT:1.0;0.93 FUNCTIONAL_SNP rs6470619 chr8 129350873 Intergenic 6 34859 CEU:1.0;0.96, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs12544478 chr8 129439019 Intron 6 123005 CEU:1.0;0.816, CHB:0.888;0.788, JPT:1.0;0.76 FUNCTIONAL_SNP rs2142200 chr8 129313171 Intergenic 6 2843 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4260863 chr8 129386613 Intergenic 6 70599 CEU:1.0;0.922, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs2203652 chr8 129410424 Intergenic 7 94410 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs2138634 chr8 129436534 Intron 7 120520 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs2138635 chr8 129436549 Intron 7 120535 CEU:1.0;0.845, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs12679235 chr8 129409135 Intergenic 7 93121 CEU:0.95;0.823, CHB:0.943;0.889, JPT:1.0;0.76 FUNCTIONAL_SNP rs4406361 chr8 129325279 Intergenic 7 9265 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0 FUNCTIONAL_SNP rs4128859 chr8 129394611 Intergenic 7 78597 CEU:0.957;0.811, CHB:0.896;0.803, JPT:1.0;0.93 FUNCTIONAL_SNP rs4367498 chr8 129391764 Intergenic 7 75750 CEU:1.0;0.922, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs4330657 chr8 129364387 Intergenic 7 48373 CEU:1.0;0.96, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs10101431 chr8 129437962 Intron 7 121948 CEU:0.957;0.878, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs4265149 chr8 129351485 Intergenic 7 35471 CEU:1.0;0.96, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs4265150 chr8 129384895 Intergenic 7 68881 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs7818955 chr8 129375154 Intergenic 7 59140 CEU:1.0;0.96, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs4470994 chr8 129330268 Intergenic 7 14254 CEU:0.959;0.92, CHB:0.947;0.853, JPT:1.0;0.93 FUNCTIONAL_SNP rs5002195 chr8 129347538 Intergenic 7 31524 CEU:1.0;0.96, CHB:0.898;0.806, JPT:1.0;0.867 FUNCTIONAL_SNP rs11993357 chr8 129427595 Intron 7 111581 CEU:0.957;0.879, CHB:0.895;0.801, JPT:1.0;0.76 FUNCTIONAL_SNP rs4613962 chr8 129377663 Intergenic 7 61649 CEU:0.959;0.92, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs975729 chr8 129316050 Intergenic 7 36 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1516967 chr8 129434622 Intron 7 118608 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs1516970 chr8 129442735 Intergenic 7 126721 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs7014842 chr8 129343201 Intergenic 7 27187 CEU:1.0;0.96, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs11776972 chr8 129407808 Intergenic 7 91794 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 FUNCTIONAL_SNP rs4602853 chr8 129370044 Intergenic 7 54030 CEU:1.0;0.96, CHB:0.898;0.806, JPT:1.0;0.93 FUNCTIONAL_SNP rs1543157 chr8 129429810 Intron 7 113796 CEU:0.958;0.882, CHB:0.898;0.806, JPT:1.0;0.76 LEAD_SNP rs10088218 chr8 129543949 Intergenic 5b ASSOCIATION 20852632 Ovarian cancer 8.52287874528 PVT1 - GSDMC FUNCTIONAL_SNP rs13328404 chr8 129552456 Intergenic 3a 8507 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs10113762 chr8 129552202 Intergenic 4 8253 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs7814937 chr8 129541475 Intergenic 4 2474 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs1561925 chr8 129569033 Intergenic 4 25084 CEU:1.0;1.0 FUNCTIONAL_SNP rs6651252 chr8 129567181 Intergenic 4 23232 CEU:1.0;1.0 FUNCTIONAL_SNP rs6651253 chr8 129567292 Intergenic 4 23343 CEU:1.0;1.0 FUNCTIONAL_SNP rs2165806 chr8 129569551 Intergenic 5a 25602 CEU:1.0;1.0 FUNCTIONAL_SNP rs16903065 chr8 129540464 Intergenic 5a 3485 CEU:1.0;1.0, YRI:1.0;0.733 FUNCTIONAL_SNP rs938648 chr8 129552491 Intergenic 5a 8542 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs6982716 chr8 129557592 Intergenic 5a 13643 CEU:1.0;1.0 FUNCTIONAL_SNP rs6982966 chr8 129557523 Intergenic 5a 13574 CEU:1.0;1.0 FUNCTIONAL_SNP rs13328411 chr8 129551089 Intergenic 5a 7140 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10108517 chr8 129549562 Intergenic 5a 5613 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10095481 chr8 129549582 Intergenic 5a 5633 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs2011527 chr8 129555532 Intergenic 5b 11583 CEU:1.0;1.0 FUNCTIONAL_SNP rs938651 chr8 129555443 Intergenic 5b 11494 CEU:1.0;1.0 FUNCTIONAL_SNP rs1400482 chr8 129541931 Intergenic 5b 2018 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1561924 chr8 129569371 Intergenic 5b 25422 CEU:1.0;1.0 FUNCTIONAL_SNP rs6470637 chr8 129556163 Intergenic 5b 12214 CEU:1.0;1.0 FUNCTIONAL_SNP rs17807628 chr8 129551311 Intergenic 5b 7362 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1400483 chr8 129547537 Intergenic 6 3588 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs1400484 chr8 129547636 Intergenic 6 3687 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs1516976 chr8 129548258 Intergenic 6 4309 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs7010594 chr8 129542834 Intergenic 6 1115 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs7010880 chr8 129542869 Intergenic 7 1080 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs7839493 chr8 129546651 Intergenic 7 2702 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs16903078 chr8 129546735 Intergenic 7 2786 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs16903080 chr8 129546865 Intergenic 7 2916 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs1516971 chr8 129542100 Intergenic 7 1849 CEU:1.0;1.0 FUNCTIONAL_SNP rs1516974 chr8 129548134 Intergenic 7 4185 CEU:1.0;1.0, YRI:1.0;0.642 FUNCTIONAL_SNP rs1516975 chr8 129548193 Intergenic 7 4244 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs10088755 chr8 129551633 Intergenic 7 7684 CEU:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs10098765 chr8 129559311 Intergenic 7 15362 CEU:1.0;1.0 FUNCTIONAL_SNP rs16903097 chr8 129556356 Intergenic 7 12407 CEU:1.0;1.0 FUNCTIONAL_SNP rs16903081 chr8 129548309 Intergenic 7 4360 CEU:1.0;1.0, YRI:1.0;0.568 LEAD_SNP rs6651252 chr8 129567181 Intergenic 4 ASSOCIATION 21102463 Crohn's disease 17.3979400087 PVT1 - GSDMC FUNCTIONAL_SNP rs13328404 chr8 129552456 Intergenic 3a 14725 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs7814937 chr8 129541475 Intergenic 4 25706 CEU:1.0;1.0 FUNCTIONAL_SNP rs1561925 chr8 129569033 Intergenic 4 1852 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs10113762 chr8 129552202 Intergenic 4 14979 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs6651253 chr8 129567292 Intergenic 4 111 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2165806 chr8 129569551 Intergenic 5a 2370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs16903065 chr8 129540464 Intergenic 5a 26717 CEU:1.0;1.0 FUNCTIONAL_SNP rs938648 chr8 129552491 Intergenic 5a 14690 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6982716 chr8 129557592 Intergenic 5a 9589 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.921 FUNCTIONAL_SNP rs13328411 chr8 129551089 Intergenic 5a 16092 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10108517 chr8 129549562 Intergenic 5a 17619 CEU:1.0;1.0 FUNCTIONAL_SNP rs6982966 chr8 129557523 Intergenic 5a 9658 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.913;0.799 FUNCTIONAL_SNP rs10095481 chr8 129549582 Intergenic 5a 17599 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2011527 chr8 129555532 Intergenic 5b 11649 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.822;0.597 FUNCTIONAL_SNP rs17807628 chr8 129551311 Intergenic 5b 15870 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs938651 chr8 129555443 Intergenic 5b 11738 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.822;0.597 FUNCTIONAL_SNP rs10088218 chr8 129543949 Intergenic 5b 23232 CEU:1.0;1.0 FUNCTIONAL_SNP rs1400482 chr8 129541931 Intergenic 5b 25250 CEU:1.0;1.0 FUNCTIONAL_SNP rs1561924 chr8 129569371 Intergenic 5b 2190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs6470637 chr8 129556163 Intergenic 5b 11018 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.822;0.597 FUNCTIONAL_SNP rs1400483 chr8 129547537 Intergenic 6 19644 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1400484 chr8 129547636 Intergenic 6 19545 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1516976 chr8 129548258 Intergenic 6 18923 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7010594 chr8 129542834 Intergenic 6 24347 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7839493 chr8 129546651 Intergenic 7 20530 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16903078 chr8 129546735 Intergenic 7 20446 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16903080 chr8 129546865 Intergenic 7 20316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10088755 chr8 129551633 Intergenic 7 15548 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1516971 chr8 129542100 Intergenic 7 25081 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.816;0.543 FUNCTIONAL_SNP rs1516974 chr8 129548134 Intergenic 7 19047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1516975 chr8 129548193 Intergenic 7 18988 CEU:1.0;1.0 FUNCTIONAL_SNP rs7010880 chr8 129542869 Intergenic 7 24312 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10098765 chr8 129559311 Intergenic 7 7870 CEU:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs16903097 chr8 129556356 Intergenic 7 10825 CEU:1.0;1.0, YRI:1.0;0.841 FUNCTIONAL_SNP rs16903081 chr8 129548309 Intergenic 7 18872 CEU:1.0;1.0 LEAD_SNP rs987525 chr8 129946154 Intergenic 4 ASSOCIATION 20436469 Cleft lip 15.3979400087 PVT1 - GSDMC ASSOCIATION 19656524 Nonsyndromic cleft lip with or without cleft palate 7.04575749056 PVT1 - GSDMC ASSOCIATION 19270707 Nonsyndromic cleft lip with or without cleft palate 23.5228787453 PVT1 - GSDMC FUNCTIONAL_SNP rs1579748 chr8 129941196 Intergenic 6 4958 CEU:1.0;0.894, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17241908 chr8 129944876 Intergenic 7 1278 CEU:1.0;0.894 LEAD_SNP rs891835 chr8 130491752 Intron 5b ASSOCIATION 19578367 Glioma 10.096910013 PVT1 - GSDMC LEAD_SNP rs10956483 chr8 130572110 Intron 7 ASSOCIATION 21738478 White blood cell types 9.69897000434 PVT1 - GSDMC LEAD_SNP rs4295627 chr8 130685457 Intron 7 ASSOCIATION 21531791 Glioma 20.3010299957 PVT1 - GSDMC ASSOCIATION 19578367 Glioma 17.6989700043 PVT1 - GSDMC FUNCTIONAL_SNP rs16904133 chr8 130653461 Intron 5b 31996 CEU:1.0;1.0, CHB:1.0;0.761, JPT:1.0;0.867 FUNCTIONAL_SNP rs6470745 chr8 130641921 Intron 5b 43536 CEU:1.0;1.0, CHB:1.0;0.717, JPT:1.0;0.673 FUNCTIONAL_SNP rs16904135 chr8 130653737 Intron 7 31720 CEU:1.0;1.0, CHB:1.0;0.76, JPT:1.0;0.761 FUNCTIONAL_SNP rs6985032 chr8 130671748 Intron 7 13709 CEU:1.0;1.0, CHB:1.0;0.763, JPT:1.0;0.761, YRI:0.885;0.584 FUNCTIONAL_SNP rs4498505 chr8 130664138 Intron 7 21319 CEU:1.0;1.0, CHB:1.0;0.717, JPT:1.0;0.715 FUNCTIONAL_SNP rs16904140 chr8 130665643 Intron 7 19814 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1077236 chr8 130640501 Intron 7 44956 CEU:1.0;0.913, CHB:1.0;0.636 FUNCTIONAL_SNP rs5022680 chr8 130685516 Intron 7 59 CEU:1.0;0.864, CHB:1.0;0.829, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10101342 chr8 130643868 Intron 7 41589 CEU:1.0;1.0, CHB:1.0;0.763, JPT:1.0;0.868 FUNCTIONAL_SNP rs16893247 chr8 130625884 Intron 7 59573 CEU:1.0;0.913, JPT:0.896;0.58 LEAD_SNP rs6470764 chr8 130725665 Intergenic 5b ASSOCIATION 20881960 Height 27.6989700043 PVT1 - GSDMC FUNCTIONAL_SNP rs7815955 chr8 130719567 Intergenic 2b 6098 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6986256 chr8 130728361 Intergenic 3a 2696 CEU:1.0;0.943, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs4733732 chr8 130738457 Intergenic 4 12792 CEU:1.0;0.943, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs6470763 chr8 130720646 Intergenic 4 5019 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7816342 chr8 130719623 Intergenic 5a 6042 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.713 FUNCTIONAL_SNP rs3886937 chr8 130737391 Intergenic 5b 11726 CEU:1.0;0.943, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs6985118 chr8 130736929 Intergenic 6 11264 CEU:1.0;0.89, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs4733724 chr8 130723728 Intergenic 7 1937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs6470765 chr8 130736697 Intergenic 7 11032 CEU:1.0;0.94, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs7833174 chr8 130718772 Intergenic 7 6893 CEU:1.0;0.935, CHB:1.0;0.884, JPT:1.0;1.0, YRI:1.0;0.685 FUNCTIONAL_SNP rs3886938 chr8 130737546 Intergenic 7 11881 CEU:1.0;0.94, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs1074286 chr8 130737601 Intergenic 7 11936 CEU:1.0;0.943, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs4130415 chr8 130718712 Intergenic 7 6953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.747 FUNCTIONAL_SNP rs2062078 chr8 130734461 Intergenic 7 8796 CEU:1.0;0.94, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs6651255 chr8 130723792 Intergenic 7 1873 CEU:1.0;0.881, CHB:1.0;0.948, JPT:1.0;1.0 LEAD_SNP rs10092658 chr8 130980472 Intron 7 ASSOCIATION 18464913 Protein quantitative trait loci 5.22184874962 RPL15P12 - ASAP1 LEAD_SNP rs6984045 chr8 131092413 Intron 2b ASSOCIATION 19525955 Multiple sclerosis 5.69897000434 ASAP1 FUNCTIONAL_SNP rs7004723 chr8 131213825 Intron 4 121412 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7815532 chr8 131284520 Intron 7 192107 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs263238 chr8 131812033 Intron 7 ASSOCIATION 21116278 Total ventricular volume 5.69897000434 ADCY8 FUNCTIONAL_SNP rs2917065 chr8 131814885 Intron 4 2852 CEU:1.0;1.0, CHB:0.943;0.765, JPT:1.0;0.805 LEAD_SNP rs2014357 chr8 133103290 Intron 6 ASSOCIATION 20585627 Common traits (Other) 6.04575749056 HHLA1 FUNCTIONAL_SNP rs1966701 chr8 133098530 Intron 5b 4760 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs2436108 chr8 133123891 Intergenic 7 20601 CEU:1.0;1.0, CHB:0.801;0.501, JPT:0.831;0.557 FUNCTIONAL_SNP rs2436094 chr8 133106065 Intron 7 2775 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1036819 chr8 135611945 Intron 4 ASSOCIATION 20595579 Longevity 24.0 ZFAT FUNCTIONAL_SNP rs9792216 chr8 135571368 Intron 5a 40577 CEU:1.0;0.854, CHB:0.935;0.703, JPT:0.89;0.718 FUNCTIONAL_SNP rs12549256 chr8 135611154 Intron 5b 791 CEU:0.926;0.857, CHB:1.0;0.948, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs3739426 chr8 135602421 Intron 7 9524 CEU:0.926;0.857, CHB:1.0;0.948, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs12680655 chr8 135637337 Intron 7 ASSOCIATION 20881960 Height 13.6989700043 ZFAT FUNCTIONAL_SNP rs894344 chr8 135612745 Coding 4 24592 CEU:1.0;0.96, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.9;0.581 FUNCTIONAL_SNP rs4909323 chr8 135637692 Intron 4 355 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs3739421 chr8 135620894 Intron 5a 16443 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs894345 chr8 135613581 Intron 5a 23756 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs894347 chr8 135613624 Intron 5a 23713 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs2277138 chr8 135622640 Intron 5b 14697 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.68 FUNCTIONAL_SNP rs7007820 chr8 135616737 Intron 6 20600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4909314 chr8 135623798 Intron 7 13539 CEU:1.0;0.872, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs894348 chr8 135627749 Intron 7 9588 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs11785144 chr8 135616199 Intron 7 21138 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs4909531 chr8 135624059 Intron 7 13278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4243849 chr8 136713137 Intergenic 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.69897000434 MAPRE1P1 - FLJ45872 FUNCTIONAL_SNP rs4269576 chr8 136735751 Intergenic 5b 22614 CEU:0.913;0.834, CHB:1.0;1.0, JPT:1.0;0.897, YRI:0.898;0.732 FUNCTIONAL_SNP rs4243851 chr8 136716904 Intergenic 5b 3767 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7821328 chr8 136716059 Intergenic 5b 2922 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.899;0.808 FUNCTIONAL_SNP rs3934488 chr8 136714099 Intergenic 5b 962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7004576 chr8 136722239 Intergenic 5b 9102 CEU:1.0;1.0, CHB:1.0;0.925, JPT:1.0;1.0 FUNCTIONAL_SNP rs7821447 chr8 136716108 Intergenic 5b 2971 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.899;0.808 FUNCTIONAL_SNP rs4074936 chr8 136737452 Intergenic 5b 24315 CEU:0.913;0.834, CHB:1.0;1.0, JPT:1.0;0.699, YRI:0.898;0.732 FUNCTIONAL_SNP rs3935050 chr8 136713826 Intergenic 5b 689 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7818062 chr8 136717991 Intergenic 5b 4854 CEU:1.0;1.0 FUNCTIONAL_SNP rs7831380 chr8 136725472 Intergenic 5b 12335 CEU:1.0;0.81, CHB:1.0;0.931, JPT:1.0;0.897 FUNCTIONAL_SNP rs7831154 chr8 136718023 Intergenic 5b 4886 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.89;0.792 FUNCTIONAL_SNP rs10875381 chr8 136719202 Intergenic 5b 6065 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.899;0.808 FUNCTIONAL_SNP rs4268160 chr8 136746031 Intergenic 6 32894 CEU:0.913;0.834, CHB:1.0;0.874 FUNCTIONAL_SNP rs7814248 chr8 136726750 Intergenic 6 13613 CEU:1.0;0.808, CHB:1.0;0.927, JPT:1.0;0.897 FUNCTIONAL_SNP rs10875380 chr8 136718900 Intergenic 6 5763 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.899;0.808 FUNCTIONAL_SNP rs4909302 chr8 136712958 Intergenic 6 179 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4909303 chr8 136715743 Intergenic 6 2606 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11166611 chr8 136731736 Intergenic 7 18599 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.897, YRI:0.897;0.667 FUNCTIONAL_SNP rs9693603 chr8 136727783 Intergenic 7 14646 CEU:1.0;0.81, CHB:1.0;0.931, JPT:1.0;0.897 FUNCTIONAL_SNP rs4377995 chr8 136723548 Intergenic 7 10411 CEU:1.0;0.81, CHB:1.0;0.93, JPT:1.0;1.0 FUNCTIONAL_SNP rs4294215 chr8 136723689 Intergenic 7 10552 CEU:1.0;0.81, CHB:1.0;0.931, JPT:1.0;1.0 FUNCTIONAL_SNP rs7820043 chr8 136715827 Intergenic 7 2690 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4617194 chr8 136723881 Intergenic 7 10744 CEU:1.0;0.834, CHB:0.929;0.862, JPT:1.0;1.0 FUNCTIONAL_SNP rs10098541 chr8 136725175 Intergenic 7 12038 CEU:1.0;0.839, CHB:1.0;0.927, JPT:0.894;0.799 FUNCTIONAL_SNP rs4501615 chr8 136705500 Intergenic 7 7637 CEU:1.0;0.81, CHB:1.0;0.931, JPT:1.0;1.0 FUNCTIONAL_SNP rs4501616 chr8 136727267 Intergenic 7 14130 CEU:1.0;0.81, CHB:1.0;0.931, JPT:1.0;0.897 FUNCTIONAL_SNP rs4909304 chr8 136724729 Intergenic 7 11592 CEU:1.0;0.832, CHB:1.0;0.923, JPT:1.0;0.896 FUNCTIONAL_SNP rs4909305 chr8 136729139 Intergenic 7 16002 CEU:1.0;0.801, CHB:1.0;0.931, JPT:1.0;0.897 FUNCTIONAL_SNP rs6577660 chr8 136725731 Intergenic 7 12594 CEU:1.0;0.81, CHB:1.0;0.931, JPT:1.0;0.897 FUNCTIONAL_SNP rs6577662 chr8 136729436 Intergenic 7 16299 CEU:1.0;0.81, CHB:1.0;0.931, JPT:1.0;0.897 LEAD_SNP rs12680546 chr8 136871739 Intergenic 7 ASSOCIATION 17362836 Amyotrophic lateral sclerosis 5.52287874528 MAPRE1P1 - FLJ45872 LEAD_SNP rs9657451 chr8 138905296 Intron 6 ASSOCIATION 20125193 Cognitive test performance 5.69897000434 FLJ45872 FUNCTIONAL_SNP rs4909716 chr8 138903347 Intron 4 1949 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2221844 chr8 138927680 Intron 5a 22384 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:0.915;0.802 FUNCTIONAL_SNP rs4909718 chr8 138923146 Intron 6 17850 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.855 FUNCTIONAL_SNP rs1511832 chr8 138923517 Intron 6 18221 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.855 FUNCTIONAL_SNP rs1511830 chr8 138922247 Intron 7 16951 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.918 LEAD_SNP rs2705293 chr8 138918945 Intron 6 ASSOCIATION 18762592 Neuroticism 5.22184874962 FLJ45872 FUNCTIONAL_SNP rs1858362 chr8 138918353 Intron 4 592 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2705295 chr8 138918300 Intron 4 645 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2705301 chr8 138916338 Intron 4 2607 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs2705300 chr8 138916445 Intron 5a 2500 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs2705296 chr8 138917641 Intron 5b 1304 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2705298 chr8 138917536 Intron 5b 1409 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1511846 chr8 138902122 Intron 5b 16823 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs2705287 chr8 138920572 Intron 5b 1627 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2705297 chr8 138917550 Intron 5b 1395 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2705288 chr8 138920228 Intron 6 1283 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs907454 chr8 138912057 Intron 6 6888 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2668101 chr8 138916785 Intron 6 2160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs1877332 chr8 138881135 Intron 6 37810 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:0.949;0.818 FUNCTIONAL_SNP rs1912835 chr8 138915331 Intron 7 3614 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1912836 chr8 138915051 Intron 7 3894 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2705302 chr8 138915718 Intron 7 3227 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1912839 chr8 138881928 Intron 7 37017 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:0.949;0.818 FUNCTIONAL_SNP rs2705291 chr8 138919701 Intron 7 756 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2705292 chr8 138919474 Intron 7 529 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1511829 chr8 138919325 Intron 7 380 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1511849 chr8 138881560 Intron 7 37385 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:0.949;0.818 FUNCTIONAL_SNP rs1858363 chr8 138918498 Intron 7 447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2668099 chr8 138915608 Intron 7 3337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2668105 chr8 138920078 Intron 7 1133 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs979148 chr8 138883472 Intron 7 35473 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:0.949;0.818 FUNCTIONAL_SNP rs9324463 chr8 138883146 Intron 7 35799 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:0.949;0.818 FUNCTIONAL_SNP rs1553907 chr8 138914425 Intron 7 4520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2468677 chr8 140519517 Intergenic 6 ASSOCIATION 21700879 Adiponectin levels 6.09691001301 COL22A1 - KCNK9 FUNCTIONAL_SNP rs2447371 chr8 140508647 Intergenic 5b 10870 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.949 FUNCTIONAL_SNP rs2447408 chr8 140506688 Intergenic 5b 12829 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.949 FUNCTIONAL_SNP rs6984330 chr8 140520698 Intergenic 6 1181 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2471081 chr8 140522134 Intergenic 6 2617 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs2468666 chr8 140515341 Intergenic 6 4176 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.807, YRI:1.0;0.521 FUNCTIONAL_SNP rs2468678 chr8 140519835 Intergenic 6 318 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12546497 chr8 140516417 Intergenic 6 3100 CEU:1.0;0.96, CHB:1.0;0.933, JPT:1.0;0.897 FUNCTIONAL_SNP rs2447404 chr8 140511111 Intergenic 7 8406 CEU:1.0;0.923, CHB:1.0;0.936, JPT:1.0;0.9 FUNCTIONAL_SNP rs2447409 chr8 140515772 Intergenic 7 3745 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.807, YRI:1.0;0.521 FUNCTIONAL_SNP rs12548447 chr8 140510093 Intergenic 7 9424 CEU:0.958;0.918, CHB:1.0;0.935, JPT:1.0;1.0 FUNCTIONAL_SNP rs2615401 chr8 140569221 Intergenic 7 49704 CEU:0.916;0.805 FUNCTIONAL_SNP rs2471077 chr8 140515401 Intergenic 7 4116 CEU:1.0;0.923, CHB:1.0;0.869, JPT:1.0;0.679 FUNCTIONAL_SNP rs2468668 chr8 140512057 Intergenic 7 7460 CEU:1.0;1.0, CHB:0.927;0.802, JPT:1.0;0.807 FUNCTIONAL_SNP rs4255117 chr8 140519858 Intergenic 7 341 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs2005470 chr8 140509497 Intergenic 7 10020 CEU:0.958;0.846, CHB:1.0;0.936, JPT:1.0;0.9 FUNCTIONAL_SNP rs2447345 chr8 140507053 Intergenic 7 12464 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.949 FUNCTIONAL_SNP rs2447346 chr8 140507195 Intergenic 7 12322 CEU:1.0;1.0, CHB:0.932;0.868, JPT:1.0;0.9 FUNCTIONAL_SNP rs2447349 chr8 140519422 Intergenic 7 95 CEU:1.0;0.849, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4961252 chr8 142104944 Intergenic 5b ASSOCIATION 21502966 Response to interferon beta therapy 7.52287874528 PTK2 - DENND3 LEAD_SNP rs7386474 chr8 142359550 Intergenic 5b ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.52287874528 SLC45A4 - GPR20 FUNCTIONAL_SNP rs4961363 chr8 142351328 Intron 2b 8222 CEU:0.959;0.883, CHB:0.905;0.75, JPT:1.0;1.0 FUNCTIONAL_SNP rs4961361 chr8 142340534 Intergenic 4 19016 CEU:0.959;0.849, CHB:1.0;0.754, JPT:1.0;1.0 FUNCTIONAL_SNP rs3935315 chr8 142353684 Intron 4 5866 CEU:0.92;0.847, CHB:0.906;0.751, JPT:1.0;0.575 FUNCTIONAL_SNP rs7386745 chr8 142359368 Intergenic 4 182 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7835008 chr8 142344218 Intergenic 5b 15332 CEU:0.959;0.849, CHB:1.0;0.754, JPT:1.0;1.0 FUNCTIONAL_SNP rs7014541 chr8 142330825 Intergenic 5b 28725 CEU:0.959;0.849, CHB:0.886;0.591, JPT:1.0;0.575 FUNCTIONAL_SNP rs9650576 chr8 142346056 Intergenic 5b 13494 CEU:0.959;0.883, CHB:1.0;0.754, JPT:1.0;0.915 FUNCTIONAL_SNP rs4961372 chr8 142358865 Intergenic 5b 685 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11167050 chr8 142348685 Intergenic 5b 10865 CEU:0.958;0.847, CHB:1.0;0.754, JPT:1.0;1.0 FUNCTIONAL_SNP rs11781197 chr8 142334476 Intergenic 5b 25074 CEU:0.957;0.844, CHB:0.894;0.666, JPT:0.861;0.532 FUNCTIONAL_SNP rs878422 chr8 142327998 Intergenic 5b 31552 CEU:0.959;0.849, CHB:0.886;0.591, JPT:1.0;0.575 FUNCTIONAL_SNP rs4961370 chr8 142358752 Intergenic 5b 798 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6578164 chr8 142359262 Intergenic 5b 288 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs13263959 chr8 142632315 Intergenic 5b ASSOCIATION 20585627 Hair color 6.09691001301 FLJ43860 - NCRNA00051 FUNCTIONAL_SNP rs6983581 chr8 142622600 Intergenic 5b 9715 CEU:1.0;0.832, CHB:0.934;0.59, JPT:1.0;0.645 FUNCTIONAL_SNP rs1496863 chr8 142629143 Intergenic 5b 3172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4907326 chr8 142627746 Intergenic 5b 4569 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs12680513 chr8 142631621 Intergenic 5b 694 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2201668 chr8 142628372 Intergenic 5b 3943 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.805 FUNCTIONAL_SNP rs1004380 chr8 142621485 Intergenic 5b 10830 CEU:1.0;0.832, CHB:0.934;0.59, JPT:1.0;0.645 FUNCTIONAL_SNP rs1982941 chr8 142634832 Intergenic 5b 2517 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.841 FUNCTIONAL_SNP rs4907362 chr8 142626257 Intergenic 5b 6058 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.944;0.8 FUNCTIONAL_SNP rs11167078 chr8 142632898 Intergenic 5b 583 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs10110698 chr8 142648232 Intergenic 5b 15917 CEU:1.0;0.832, CHB:0.943;0.802, JPT:0.892;0.756, YRI:1.0;0.552 FUNCTIONAL_SNP rs9644543 chr8 142633071 Intergenic 5b 756 CEU:1.0;1.0, CHB:1.0;0.819, JPT:1.0;0.948, YRI:1.0;1.0 LEAD_SNP rs2294008 chr8 143761931 Coding 4 ASSOCIATION 20972438 Bladder cancer 10.3979400087 PSCA ASSOCIATION 19648920 Bladder cancer 9.69897000434 PSCA FUNCTIONAL_SNP rs1045531 chr8 143763547 Coding 4 1616 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;0.945, YRI:1.0;0.853 FUNCTIONAL_SNP rs2978982 chr8 143763490 Coding 4 1559 CEU:1.0;1.0, CHB:1.0;0.935, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs2976392 chr8 143762932 Exon,non-coding 4 1001 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2976394 chr8 143763622 Exon,non-coding 5b 1691 CEU:1.0;1.0, CHB:1.0;0.882, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs2976395 chr8 143763750 Exon,non-coding 5b 1819 CEU:1.0;0.961, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs2976396 chr8 143764001 Exon,non-coding 5b 2070 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs1045547 chr8 143763757 Exon,non-coding 5b 1826 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs2920296 chr8 143763109 Exon,non-coding 4 1178 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.897 FUNCTIONAL_SNP rs1045574 chr8 143763958 Exon,non-coding 5b 2027 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs10216533 chr8 143763690 Exon,non-coding 5b 1759 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs1045605 chr8 143764101 Exon,non-coding 4 2170 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.807 FUNCTIONAL_SNP rs2920297 chr8 143763083 Exon,non-coding 4 1152 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs2920298 chr8 143763043 Exon,non-coding 4 1112 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs2920283 chr8 143757037 Intron 4 4894 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.904 FUNCTIONAL_SNP rs2976397 chr8 143764613 Intergenic 5b 2682 CEU:1.0;1.0, CHB:1.0;0.518, JPT:1.0;0.53 FUNCTIONAL_SNP rs2978978 chr8 143756530 Intron 5b 5401 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs2920280 chr8 143761144 Intron 5b 787 CEU:1.0;1.0, CHB:1.0;0.566, JPT:1.0;0.536 FUNCTIONAL_SNP rs2585179 chr8 143774193 Intergenic 5b 12262 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs2920293 chr8 143765414 Intergenic 5b 3483 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs2920292 chr8 143765699 Intergenic 5b 3768 CEU:1.0;0.923, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs2920294 chr8 143765326 Intergenic 5b 3395 CEU:1.0;1.0 LEAD_SNP rs2290416 chr8 144657600 Coding 5b ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.04575749056 NAPRT1 LEAD_SNP rs7040024 chr9 845516 Intron 6 ASSOCIATION 21551455 Testicular cancer 11.0 DMRT1 FUNCTIONAL_SNP rs7856704 chr9 844022 Intron 5b 1494 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7853446 chr9 843731 Intron 5b 1785 CEU:1.0;1.0, CHB:1.0;0.832, JPT:1.0;0.758 FUNCTIONAL_SNP rs7862426 chr9 844001 Intron 5b 1515 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs755383 chr9 863635 Intron 7 ASSOCIATION 21551455 Testicular cancer 9.04575749056 DMRT1 ASSOCIATION 20543847 Testicular germ cell cancer 23.0 DMRT1 LEAD_SNP rs17641078 chr9 1056959 Coding 5b ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.30102999566 DMRT2 LEAD_SNP rs7034200 chr9 4289050 Intron 6 ASSOCIATION 20081858 Fasting glucose-related traits 12.0 GLIS3 ASSOCIATION 20081858 Fasting glucose-related traits 13.0 GLIS3 FUNCTIONAL_SNP rs7041847 chr9 4287466 Intron 4 1584 CEU:1.0;0.924, CHB:0.943;0.841, JPT:1.0;0.909 FUNCTIONAL_SNP rs7020673 chr9 4291747 Intron 5b 2697 CEU:1.0;0.924, CHB:1.0;0.898, JPT:1.0;0.867 FUNCTIONAL_SNP rs10814916 chr9 4293150 Intron 5b 4100 CEU:0.959;0.85, CHB:1.0;1.0, JPT:1.0;0.788, YRI:1.0;0.586 FUNCTIONAL_SNP rs10758591 chr9 4285986 Intron 6 3064 CEU:1.0;0.929, CHB:0.945;0.847, JPT:0.951;0.825 FUNCTIONAL_SNP rs10814914 chr9 4289196 Intron 6 146 CEU:1.0;0.964, CHB:1.0;0.901, JPT:1.0;0.872 FUNCTIONAL_SNP rs6476842 chr9 4291268 Intron 7 2218 CEU:1.0;0.889, CHB:1.0;0.574, JPT:1.0;0.682 FUNCTIONAL_SNP rs7024686 chr9 4287211 Intron 7 1839 CEU:1.0;0.924, CHB:1.0;0.898, JPT:1.0;0.909 FUNCTIONAL_SNP rs7867224 chr9 4292152 Intron 7 3102 CEU:0.961;0.89, CHB:0.943;0.843, JPT:1.0;0.823 LEAD_SNP rs7020673 chr9 4291747 Intron 5b ASSOCIATION 19430480 Type 1 diabetes 11.3010299957 GLIS3 LEAD_SNP rs10758593 chr9 4292083 Intron 5b ASSOCIATION 18840781 Type 1 diabetes 5.52287874528 GLIS3 FUNCTIONAL_SNP rs6476839 chr9 4290823 Intron 3a 1260 CEU:1.0;1.0, CHB:0.942;0.888, JPT:1.0;0.952, YRI:0.923;0.821 FUNCTIONAL_SNP rs10116772 chr9 4290541 Intron 4 1542 CEU:1.0;0.959, CHB:1.0;0.944, JPT:1.0;0.952, YRI:0.924;0.853 LEAD_SNP rs385893 chr9 4763176 Intergenic 4 ASSOCIATION 19820697 Hematological parameters 16.0457574906 AK3 - RPS5P6 LEAD_SNP rs10758658 chr9 4856877 Intron 6 ASSOCIATION 19862010 Mean corpuscular hemoglobin 13.6989700043 RCL1 ASSOCIATION 19862010 Mean corpuscular volume 19.5228787453 RCL1 FUNCTIONAL_SNP rs1053872 chr9 4860643 Exon,non-coding 7 3766 CEU:0.94;0.883, CHB:0.837;0.608, JPT:0.949;0.858 FUNCTIONAL_SNP rs10758656 chr9 4852599 Intron 2c 4278 CEU:0.937;0.877, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs10974815 chr9 4854253 Intron 3a 2624 CEU:0.936;0.825, YRI:1.0;1.0 FUNCTIONAL_SNP rs7853365 chr9 4855858 Intron 4 1019 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs2236496 chr9 4844265 Intron 5b 12612 CEU:1.0;0.943, CHB:1.0;0.953, JPT:1.0;0.953 FUNCTIONAL_SNP rs2236497 chr9 4844704 Intron 5b 12173 CEU:1.0;0.943, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs10758657 chr9 4853751 Intron 6 3126 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10815094 chr9 4845520 Intron 6 11357 CEU:1.0;0.943, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs10815095 chr9 4848297 Intron 6 8580 CEU:1.0;0.943, CHB:1.0;0.954, JPT:1.0;0.908 FUNCTIONAL_SNP rs10815098 chr9 4865338 Intron 6 8461 CEU:0.933;0.815, JPT:0.823;0.677 FUNCTIONAL_SNP rs7868737 chr9 4843672 Intron 7 13205 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.953 LEAD_SNP rs10758669 chr9 4981602 Intergenic 7 ASSOCIATION 21297633 Ulcerative colitis 24.6989700043 RCL1 - JAK2 ASSOCIATION 20228799 Ulcerative colitis 6.0 RCL1 - JAK2 ASSOCIATION 18587394 Crohn's disease 8.52287874528 RCL1 - JAK2 LEAD_SNP rs10974944 chr9 5070831 Intron 7 ASSOCIATION 19287384 Myeloproliferative neoplasms 19.3979400087 JAK2 FUNCTIONAL_SNP rs3780381 chr9 5114523 Intron 5b 43692 CEU:1.0;0.861, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs884132 chr9 5114522 Intron 5b 43691 CEU:1.0;0.861, CHB:1.0;0.933, JPT:1.0;1.0, YRI:0.929;0.807 FUNCTIONAL_SNP rs2274649 chr9 5090934 Intron 7 20103 CEU:1.0;0.861, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs12340866 chr9 5094185 Intron 7 23354 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.929;0.807 FUNCTIONAL_SNP rs10974963 chr9 5101305 Intron 7 30474 CEU:1.0;0.861, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs3780366 chr9 5068596 Intron 7 2235 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs3780367 chr9 5068755 Intron 7 2076 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs12340895 chr9 5076691 Intron 7 5860 CEU:1.0;0.95, CHB:1.0;0.933, JPT:1.0;0.941, YRI:1.0;0.87 FUNCTIONAL_SNP rs12340617 chr9 5164492 Intron 7 93661 CEU:1.0;0.82, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.937 LEAD_SNP rs10975003 chr9 5213687 Intergenic 7 ASSOCIATION 19915573 Ulcerative colitis 6.0 INSL6 - INSL4 FUNCTIONAL_SNP rs10283734 chr9 5217139 Intergenic 7 3452 CEU:1.0;0.828, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;0.867 LEAD_SNP rs1342326 chr9 6190076 Intergenic 6 ASSOCIATION 20860503 Asthma 9.04575749056 RANBP6 - IL33 LEAD_SNP rs4742269 chr9 6849317 Intron 7 ASSOCIATION 20923822 Radiation response 5.30102999566 KDM4C LEAD_SNP rs842304 chr9 7682601 Intergenic 7 ASSOCIATION 21160409 HIV-1 susceptibility 5.39794000867 RPL4P5 - C9orf123 LEAD_SNP rs1535480 chr9 7925381 Intergenic 6 ASSOCIATION 20585627 Common traits (Other) 6.39794000867 C9orf123 - PTPRD LEAD_SNP rs7044355 chr9 8196511 Intergenic 6 ASSOCIATION 20526338 Platelet aggregation 7.0 C9orf123 - PTPRD FUNCTIONAL_SNP rs1538521 chr9 8197045 Intergenic 7 534 CEU:1.0;0.889 LEAD_SNP rs10815798 chr9 8235633 Intergenic 5a ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.22184874962 C9orf123 - PTPRD LEAD_SNP rs1975197 chr9 8846955 Intron 7 ASSOCIATION 18660810 Restless legs syndrome 8.22184874962 PTPRD LEAD_SNP rs17584499 chr9 8879118 Intron 7 ASSOCIATION 20174558 Type 2 diabetes 9.04575749056 PTPRD LEAD_SNP rs4626664 chr9 9261737 Intron 7 ASSOCIATION 18660810 Restless legs syndrome 9.22184874962 PTPRD LEAD_SNP rs2475335 chr9 10260263 Intron 7 ASSOCIATION 20522523 Partial epilepsies 5.04575749056 PTPRD FUNCTIONAL_SNP rs10958980 chr9 10258909 Intron 6 1354 CEU:1.0;0.929, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2498612 chr9 10254968 Intron 7 5295 CEU:1.0;0.862, CHB:0.934;0.82, JPT:1.0;1.0, YRI:0.846;0.716 FUNCTIONAL_SNP rs2475339 chr9 10262484 Intron 7 2221 CEU:1.0;0.93, YRI:1.0;0.556 LEAD_SNP rs649891 chr9 10430602 Intron 7 ASSOCIATION 21647700 Type 2 diabetes 5.22184874962 PTPRD LEAD_SNP rs1325154 chr9 12582565 Intergenic 6 ASSOCIATION 18937294 Attention deficit hyperactivity disorder (time to onset) 5.30102999566 RN7SL5P - TYRP1 LEAD_SNP rs1408799 chr9 12672097 Intergenic 6 ASSOCIATION 18488028 Blue vs. green eyes 16.2218487496 RN7SL5P - TYRP1 FUNCTIONAL_SNP rs1408800 chr9 12672275 Intergenic 6 178 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.946 LEAD_SNP rs1360517 chr9 13007129 Intergenic 5b ASSOCIATION 19754311 AIDS 5.52287874528 TDPX2 - MPDZ FUNCTIONAL_SNP rs1328909 chr9 13017271 Intergenic 7 10142 CEU:1.0;0.864, CHB:1.0;0.908, JPT:1.0;1.0 FUNCTIONAL_SNP rs4741267 chr9 12994972 Intergenic 7 12157 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1556032 chr9 14446001 Intergenic 7 ASSOCIATION 19754311 AIDS 5.04575749056 RPL7AP47 - ZDHHC21 LEAD_SNP rs10961780 chr9 14898161 Intron 7 ASSOCIATION 19893584 Height 5.69897000434 FREM1 LEAD_SNP rs1780159 chr9 15157977 Intergenic 5b ASSOCIATION 20705733 Serum calcium 5.22184874962 PSIP1P1 - TTC39B LEAD_SNP rs471364 chr9 15289578 Intron 5b ASSOCIATION 19060906 HDL cholesterol 9.52287874528 TTC39B LEAD_SNP rs643531 chr9 15296034 Intron 4 ASSOCIATION 20864672 HDL cholesterol 8.15490195999 TTC39B FUNCTIONAL_SNP rs675849 chr9 15298666 Intron 3a 2632 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs686030 chr9 15304782 Intron 4 8748 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs585002 chr9 15293513 Intron 6 2521 CEU:0.934;0.819, JPT:1.0;0.696 FUNCTIONAL_SNP rs661048 chr9 15297629 Intron 6 1595 CEU:1.0;0.929, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.685 FUNCTIONAL_SNP rs578194 chr9 15293379 Intron 7 2655 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs660686 chr9 15297587 Intron 7 1553 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs581080 chr9 15305378 Intron 7 9344 CEU:0.934;0.819, JPT:1.0;0.696 LEAD_SNP rs1927702 chr9 15986716 Intron 6 ASSOCIATION 19851299 Body mass index 5.22184874962 HMGN2L - BNC2 FUNCTIONAL_SNP rs3008747 chr9 15973161 Exon,non-coding 7 13555 CEU:1.0;0.889, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs2987081 chr9 16012046 Intron 4 25330 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17352900 chr9 16012195 Intron 5a 25479 CEU:1.0;0.853 FUNCTIONAL_SNP rs3008745 chr9 15974512 Intron 5a 12204 CEU:1.0;0.889, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.861 FUNCTIONAL_SNP rs3008746 chr9 15974495 Intron 5a 12221 CEU:1.0;0.889, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.861 FUNCTIONAL_SNP rs10962251 chr9 16012225 Intron 5a 25509 CEU:1.0;0.85 FUNCTIONAL_SNP rs2987072 chr9 15944448 Intron 5b 42268 CEU:1.0;0.855, CHB:0.924;0.576, JPT:1.0;0.647 FUNCTIONAL_SNP rs1328269 chr9 15998506 Intron 5b 11790 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.605 FUNCTIONAL_SNP rs3008744 chr9 15975800 Intron 5b 10916 CEU:1.0;0.924, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs2987010 chr9 15966278 Intron 6 20438 CEU:1.0;0.852, CHB:1.0;0.903, JPT:1.0;1.0, YRI:0.887;0.745 FUNCTIONAL_SNP rs1927696 chr9 15929374 Intron 6 57342 CEU:0.957;0.815, CHB:0.889;0.751, JPT:0.949;0.9 FUNCTIONAL_SNP rs1927699 chr9 15986487 Intron 6 229 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1927700 chr9 15986529 Intron 6 187 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2987031 chr9 15994724 Intron 6 8008 CEU:1.0;1.0, CHB:1.0;0.635, JPT:1.0;0.655 FUNCTIONAL_SNP rs2987032 chr9 15995559 Intron 6 8843 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2225181 chr9 15922325 Intron 6 64391 CEU:1.0;0.855, CHB:0.945;0.847, JPT:0.949;0.9 FUNCTIONAL_SNP rs2987041 chr9 16002540 Intron 6 15824 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2987069 chr9 15942147 Intron 6 44569 CEU:1.0;0.889, CHB:0.924;0.576, JPT:1.0;0.674 FUNCTIONAL_SNP rs1169478 chr9 15895539 Intron 6 91177 CEU:1.0;0.924, CHB:0.853;0.522, JPT:0.856;0.536 FUNCTIONAL_SNP rs1359949 chr9 15987538 Intron 6 822 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2987090 chr9 16013722 Intron 6 27006 CEU:1.0;0.961, CHB:1.0;0.635, JPT:1.0;0.655 FUNCTIONAL_SNP rs2987098 chr9 16017488 Intron 6 30772 CEU:1.0;0.953, CHB:0.886;0.526, JPT:1.0;0.657 FUNCTIONAL_SNP rs2794634 chr9 15899764 Intron 6 86952 CEU:0.96;0.922, CHB:0.924;0.576, JPT:0.926;0.594 FUNCTIONAL_SNP rs2794636 chr9 15899327 Intron 6 87389 CEU:1.0;0.957, CHB:0.924;0.576, JPT:0.929;0.657 FUNCTIONAL_SNP rs770191 chr9 15861885 Intron 6 124831 CEU:0.918;0.81, CHB:0.924;0.576, JPT:0.944;0.805 FUNCTIONAL_SNP rs10810512 chr9 16009911 Intron 6 23195 CEU:1.0;0.853 FUNCTIONAL_SNP rs1328286 chr9 15918933 Intron 6 67783 CEU:1.0;0.855, CHB:0.947;0.897, JPT:0.949;0.9, YRI:0.942;0.666 FUNCTIONAL_SNP rs1328288 chr9 15918706 Intron 6 68010 CEU:1.0;0.823, CHB:0.901;0.502, JPT:0.921;0.578 FUNCTIONAL_SNP rs770213 chr9 15888484 Intron 6 98232 CEU:1.0;0.961, CHB:0.924;0.576, JPT:0.926;0.594 FUNCTIONAL_SNP rs3008686 chr9 15916844 Intron 6 69872 CEU:1.0;0.924, CHB:0.924;0.576, JPT:0.926;0.594 FUNCTIONAL_SNP rs3008714 chr9 16015859 Intron 6 29143 CEU:1.0;0.961, CHB:1.0;0.596, JPT:1.0;0.584 FUNCTIONAL_SNP rs3008719 chr9 16011741 Intron 6 25025 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3008723 chr9 16009899 Intron 6 23183 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3008742 chr9 15980555 Intron 6 6161 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3008749 chr9 15968331 Intron 6 18385 CEU:1.0;0.822, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.896;0.802 FUNCTIONAL_SNP rs3008726 chr9 16009266 Intron 6 22550 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2860316 chr9 15986768 Intron 6 52 CEU:1.0;1.0, CHB:1.0;0.622, JPT:1.0;0.639 FUNCTIONAL_SNP rs10962252 chr9 16012562 Intron 6 25846 CEU:1.0;0.879 FUNCTIONAL_SNP rs2987009 chr9 15964515 Intron 7 22201 CEU:1.0;0.855, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.894;0.76 FUNCTIONAL_SNP rs2987011 chr9 15966436 Intron 7 20280 CEU:1.0;0.889, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.886;0.743 FUNCTIONAL_SNP rs2987012 chr9 15968995 Intron 7 17721 CEU:1.0;0.822, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.894;0.76 FUNCTIONAL_SNP rs2987013 chr9 15970668 Intron 7 16048 CEU:1.0;0.889, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs2987014 chr9 15971164 Intron 7 15552 CEU:1.0;0.849, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2987017 chr9 15984735 Intron 7 1981 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2987018 chr9 15984937 Intron 7 1779 CEU:1.0;1.0, CHB:1.0;0.625, JPT:1.0;0.703 FUNCTIONAL_SNP rs2987019 chr9 15985498 Intron 7 1218 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2987020 chr9 15986028 Intron 7 688 CEU:1.0;1.0, CHB:1.0;0.899, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2987021 chr9 15986042 Intron 7 674 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2987022 chr9 15986221 Intron 7 495 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2987023 chr9 15986373 Intron 7 343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2987033 chr9 15995638 Intron 7 8922 CEU:1.0;0.958, CHB:1.0;0.895, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17353213 chr9 16017055 Intron 7 30339 CEU:0.957;0.813 FUNCTIONAL_SNP rs2987070 chr9 15942765 Intron 7 43951 CEU:1.0;0.924, CHB:0.924;0.576, JPT:1.0;0.655 FUNCTIONAL_SNP rs2987071 chr9 15943498 Intron 7 43218 CEU:1.0;1.0, CHB:0.924;0.576, JPT:1.0;0.655 FUNCTIONAL_SNP rs1169479 chr9 15895806 Intron 7 90910 CEU:1.0;0.923, JPT:0.856;0.536 FUNCTIONAL_SNP rs1169480 chr9 15895834 Intron 7 90882 CEU:1.0;0.923, CHB:0.924;0.576, JPT:0.856;0.536 FUNCTIONAL_SNP rs1359950 chr9 15987539 Intron 7 823 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1359953 chr9 15928495 Intron 7 58221 CEU:1.0;0.822, CHB:0.924;0.576, JPT:0.926;0.594 FUNCTIONAL_SNP rs2987024 chr9 15986795 Intron 7 79 CEU:1.0;1.0, CHB:1.0;0.89, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1328265 chr9 15978631 Intron 7 8085 CEU:1.0;1.0, CHB:0.947;0.897, JPT:1.0;1.0, YRI:1.0;0.861 FUNCTIONAL_SNP rs770211 chr9 15887965 Intron 7 98751 CEU:1.0;0.959, CHB:0.919;0.588, JPT:0.923;0.584 FUNCTIONAL_SNP rs770215 chr9 15890137 Intron 7 96579 CEU:1.0;0.855, CHB:0.924;0.576, JPT:0.856;0.536 FUNCTIONAL_SNP rs3008681 chr9 15931774 Intron 7 54942 CEU:1.0;0.822, CHB:0.945;0.847, JPT:1.0;0.951, YRI:0.843;0.71 FUNCTIONAL_SNP rs3008710 chr9 16018357 Intron 7 31641 CEU:1.0;0.961, CHB:1.0;0.949, JPT:1.0;0.904 FUNCTIONAL_SNP rs3008715 chr9 16015713 Intron 7 28997 CEU:1.0;0.961, CHB:1.0;0.949, JPT:1.0;0.904 FUNCTIONAL_SNP rs2987042 chr9 16002556 Intron 7 15840 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.946 FUNCTIONAL_SNP rs2382542 chr9 15988358 Intron 7 1642 CEU:1.0;0.961 FUNCTIONAL_SNP rs3008728 chr9 16009099 Intron 7 22383 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs735962 chr9 15926796 Intron 7 59920 CEU:1.0;0.822, CHB:0.945;0.847, JPT:0.949;0.9, YRI:1.0;0.717 FUNCTIONAL_SNP rs3008732 chr9 16001924 Intron 7 15208 CEU:1.0;0.961, CHB:1.0;0.948, JPT:1.0;0.95 FUNCTIONAL_SNP rs3008739 chr9 15981754 Intron 7 4962 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0 FUNCTIONAL_SNP rs3008748 chr9 15969470 Intron 7 17246 CEU:1.0;0.889, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.894;0.76 FUNCTIONAL_SNP rs13298936 chr9 16015576 Intron 7 28860 CEU:1.0;0.853 FUNCTIONAL_SNP rs3008730 chr9 16008608 Intron 7 21892 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13298860 chr9 16015384 Intron 7 28668 CEU:1.0;0.853 FUNCTIONAL_SNP rs1328271 chr9 15998645 Intron 7 11929 CEU:1.0;1.0, CHB:1.0;0.635, JPT:1.0;0.647 FUNCTIONAL_SNP rs9407702 chr9 15984545 Intron 7 2171 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2987079 chr9 16010931 Intron 7 24215 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2987086 chr9 16013072 Intron 7 26356 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2153271 chr9 16864521 Intron 5b ASSOCIATION 20585627 Freckling 9.39794000867 BNC2 FUNCTIONAL_SNP rs10962668 chr9 16894140 Intergenic 4 29619 CEU:1.0;0.923, CHB:1.0;0.735, JPT:1.0;0.935, YRI:0.897;0.73 FUNCTIONAL_SNP rs3927680 chr9 16887366 Intergenic 6 22845 CEU:1.0;0.923, CHB:1.0;0.735, JPT:1.0;0.935, YRI:0.896;0.665 FUNCTIONAL_SNP rs1416742 chr9 16856883 Intron 6 7638 CEU:1.0;1.0, CHB:1.0;0.916, JPT:0.926;0.799, YRI:0.899;0.808 FUNCTIONAL_SNP rs1339552 chr9 16848790 Intron 7 15731 CEU:1.0;1.0, CHB:0.911;0.764, JPT:0.926;0.8 LEAD_SNP rs3814113 chr9 16915021 Intergenic 7 ASSOCIATION 19648919 Ovarian cancer 18.3010299957 BNC2 - RPL31P42 FUNCTIONAL_SNP rs4445329 chr9 16911757 Intergenic 5a 3264 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.921;0.736, YRI:1.0;1.0 FUNCTIONAL_SNP rs10738467 chr9 16910677 Intergenic 5b 4344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.923;0.792, YRI:1.0;1.0 FUNCTIONAL_SNP rs7032221 chr9 16914895 Intergenic 7 126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.927, YRI:1.0;1.0 LEAD_SNP rs10810865 chr9 17895105 Intergenic 4 ASSOCIATION 19734545 Cognitive performance 5.39794000867 SH3GL2 - ADAMTSL1 LEAD_SNP rs1755289 chr9 17938351 Intergenic 3a ASSOCIATION 19010793 Multiple sclerosis 5.52287874528 SH3GL2 - ADAMTSL1 LEAD_SNP rs2210327 chr9 18109235 Intergenic 7 ASSOCIATION 20445134 Heart failure 6.15490195999 SH3GL2 - ADAMTSL1 FUNCTIONAL_SNP rs10810884 chr9 18013472 Intergenic 5a 95763 CEU:1.0;1.0 FUNCTIONAL_SNP rs12238245 chr9 18107808 Intergenic 5b 1427 CEU:1.0;1.0, CHB:1.0;0.825, JPT:0.924;0.746 FUNCTIONAL_SNP rs12553148 chr9 18036979 Intergenic 5b 72256 CEU:1.0;1.0, JPT:0.782;0.512 FUNCTIONAL_SNP rs12553925 chr9 18031974 Intergenic 6 77261 CEU:1.0;1.0 FUNCTIONAL_SNP rs12683106 chr9 18003950 Intergenic 6 105285 CEU:1.0;1.0 FUNCTIONAL_SNP rs10963408 chr9 18044802 Intergenic 6 64433 CEU:1.0;0.825, CHB:0.818;0.547 FUNCTIONAL_SNP rs16936310 chr9 18102453 Intergenic 6 6782 CEU:1.0;1.0, CHB:0.95;0.903, JPT:0.933;0.772 FUNCTIONAL_SNP rs10963451 chr9 18104101 Intergenic 6 5134 CEU:1.0;1.0, CHB:0.948;0.855, JPT:0.933;0.772 FUNCTIONAL_SNP rs10810891 chr9 18041998 Intergenic 7 67237 CEU:1.0;1.0, CHB:0.859;0.511 FUNCTIONAL_SNP rs10810894 chr9 18046709 Intergenic 7 62526 CEU:1.0;0.825 FUNCTIONAL_SNP rs10810900 chr9 18091453 Intergenic 7 17782 CEU:1.0;1.0, CHB:0.941;0.723, JPT:0.858;0.616 FUNCTIONAL_SNP rs12685471 chr9 18048362 Intergenic 7 60873 CEU:1.0;1.0, CHB:0.92;0.515 FUNCTIONAL_SNP rs10963442 chr9 18090973 Intergenic 7 18262 CEU:1.0;1.0, CHB:0.943;0.766, JPT:0.853;0.576 FUNCTIONAL_SNP rs10810890 chr9 18033944 Intergenic 7 75291 CEU:1.0;1.0, CHB:0.728;0.504 FUNCTIONAL_SNP rs10756930 chr9 18087087 Intergenic 7 22148 CEU:1.0;1.0, CHB:0.794;0.63, JPT:0.853;0.576 FUNCTIONAL_SNP rs16936263 chr9 18037325 Intergenic 7 71910 CEU:1.0;1.0, JPT:0.782;0.512 FUNCTIONAL_SNP rs11792843 chr9 18023764 Intergenic 7 85471 CEU:1.0;1.0, CHB:0.818;0.547 FUNCTIONAL_SNP rs10963412 chr9 18046419 Intergenic 7 62816 CEU:1.0;1.0 FUNCTIONAL_SNP rs10963426 chr9 18067527 Intergenic 7 41708 CEU:1.0;1.0, CHB:0.819;0.548, JPT:0.789;0.553 FUNCTIONAL_SNP rs10963455 chr9 18105578 Intergenic 7 3657 CEU:1.0;1.0, CHB:0.95;0.903, JPT:0.868;0.709 FUNCTIONAL_SNP rs10963435 chr9 18076712 Intergenic 7 32523 CEU:1.0;0.825, CHB:0.783;0.583, JPT:0.846;0.562 FUNCTIONAL_SNP rs1854581 chr9 18026043 Intergenic 7 83192 CEU:1.0;0.825 FUNCTIONAL_SNP rs16936317 chr9 18102688 Intergenic 7 6547 CEU:1.0;1.0, CHB:0.95;0.903, JPT:0.933;0.772 LEAD_SNP rs16937883 chr9 20098711 Intergenic 6 ASSOCIATION 19187332 Asthma (toluene diisocyanate-induced) 5.15490195999 SLC24A2 - SMNP FUNCTIONAL_SNP rs5025178 chr9 20097117 Intergenic 7 1594 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4636294 chr9 21747803 Intergenic 6 ASSOCIATION 19578365 Cutaneous nevi 14.5228787453 IFNE - MTAP FUNCTIONAL_SNP rs2043991 chr9 21731081 Intergenic 2b 16722 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.857 FUNCTIONAL_SNP rs2165408 chr9 21802469 Intergenic 2b 54666 CEU:1.0;0.888, CHB:0.94;0.835, JPT:0.943;0.765, YRI:1.0;0.587 FUNCTIONAL_SNP rs1440993 chr9 21778660 Intergenic 2b 30857 CEU:1.0;0.875, CHB:1.0;1.0, JPT:0.941;0.836 FUNCTIONAL_SNP rs1335512 chr9 21761440 Intergenic 2b 13637 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851, YRI:0.84;0.509 FUNCTIONAL_SNP rs1372058 chr9 21747311 Intergenic 2b 492 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.9, YRI:1.0;0.719 FUNCTIONAL_SNP rs1965153 chr9 21752105 Intergenic 4 4302 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.766 FUNCTIONAL_SNP rs10738595 chr9 21745004 Intergenic 4 2799 CEU:1.0;1.0, CHB:0.939;0.789, JPT:0.943;0.764, YRI:1.0;1.0 FUNCTIONAL_SNP rs1372059 chr9 21747420 Intergenic 4 383 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.719 FUNCTIONAL_SNP rs10811615 chr9 21782164 Intergenic 5a 34361 CEU:1.0;0.888, CHB:0.94;0.835, JPT:0.939;0.752 FUNCTIONAL_SNP rs10116451 chr9 21727352 Intergenic 5a 20451 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.855, YRI:1.0;0.857 FUNCTIONAL_SNP rs9298823 chr9 21749607 Intergenic 5a 1804 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.931 FUNCTIONAL_SNP rs4341236 chr9 21727208 Intergenic 5a 20595 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.857 FUNCTIONAL_SNP rs1345027 chr9 21751962 Intergenic 5b 4159 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.719 FUNCTIONAL_SNP rs1345028 chr9 21752068 Intergenic 5b 4265 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:0.849;0.627 FUNCTIONAL_SNP rs1561652 chr9 21742816 Intergenic 5b 4987 CEU:1.0;1.0, CHB:1.0;0.841, JPT:0.946;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs1414242 chr9 21748239 Intergenic 5b 436 CEU:1.0;0.924, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs1414244 chr9 21748532 Intergenic 5b 729 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.931 FUNCTIONAL_SNP rs1414245 chr9 21750069 Intergenic 5b 2266 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.931 FUNCTIONAL_SNP rs1414247 chr9 21750170 Intergenic 5b 2367 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.931 FUNCTIONAL_SNP rs1414250 chr9 21754947 Intergenic 5b 7144 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851, YRI:1.0;0.766 FUNCTIONAL_SNP rs1414251 chr9 21755030 Intergenic 5b 7227 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851, YRI:0.924;0.743 FUNCTIONAL_SNP rs9886831 chr9 21773167 Intergenic 5b 25364 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851, YRI:0.761;0.537 FUNCTIONAL_SNP rs871024 chr9 21803880 Intron 5b 56077 CEU:1.0;0.854, CHB:0.94;0.835, JPT:0.943;0.765, YRI:1.0;0.587 FUNCTIONAL_SNP rs1414257 chr9 21757767 Intergenic 5b 9964 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851, YRI:1.0;0.928 FUNCTIONAL_SNP rs10757243 chr9 21744802 Intergenic 5b 3001 CEU:1.0;1.0, CHB:0.939;0.789, JPT:0.945;0.847, YRI:1.0;1.0 FUNCTIONAL_SNP rs9644821 chr9 21741197 Intergenic 5b 6606 CEU:1.0;1.0, CHB:0.94;0.792, JPT:0.946;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs10965122 chr9 21775508 Intergenic 5b 27705 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.944;0.845, YRI:1.0;0.652 FUNCTIONAL_SNP rs10757255 chr9 21776631 Intergenic 5b 28828 CEU:1.0;1.0, CHB:1.0;0.944, JPT:0.945;0.847, YRI:1.0;0.635 FUNCTIONAL_SNP rs4548267 chr9 21748073 Intergenic 5b 270 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs3927737 chr9 21827992 Intron 5b 80189 CEU:0.916;0.806, CHB:0.914;0.562, JPT:0.871;0.585, YRI:1.0;0.587 FUNCTIONAL_SNP rs3849929 chr9 21769412 Intergenic 5b 21609 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851, YRI:1.0;0.787 FUNCTIONAL_SNP rs10811595 chr9 21715801 Intergenic 5b 32002 CEU:1.0;0.886, CHB:1.0;0.942, JPT:1.0;0.855, YRI:1.0;0.719 FUNCTIONAL_SNP rs1335505 chr9 21748484 Intergenic 5b 681 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.931 FUNCTIONAL_SNP rs1335506 chr9 21750267 Intergenic 5b 2464 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.931 FUNCTIONAL_SNP rs1335507 chr9 21750445 Intergenic 5b 2642 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.931 FUNCTIONAL_SNP rs1335508 chr9 21750587 Intergenic 5b 2784 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.931 FUNCTIONAL_SNP rs1556696 chr9 21741985 Intergenic 5b 5818 CEU:1.0;1.0, CHB:0.94;0.792, JPT:0.946;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs1556697 chr9 21741993 Intergenic 5b 5810 CEU:1.0;1.0, CHB:0.94;0.792, JPT:0.946;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs7874319 chr9 21735881 Intergenic 5b 11922 CEU:1.0;0.882, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.857 FUNCTIONAL_SNP rs7848230 chr9 21720921 Intergenic 5b 26882 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.857, YRI:1.0;0.703 FUNCTIONAL_SNP rs4300088 chr9 21755266 Intergenic 5b 7463 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851, YRI:0.85;0.673 FUNCTIONAL_SNP rs2152272 chr9 21773416 Intergenic 5b 25613 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851, YRI:1.0;0.653 FUNCTIONAL_SNP rs2152273 chr9 21773347 Intergenic 5b 25544 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851 FUNCTIONAL_SNP rs7846749 chr9 21780251 Intergenic 5b 32448 CEU:1.0;1.0, CHB:0.94;0.835, JPT:0.943;0.765 FUNCTIONAL_SNP rs2184551 chr9 21773222 Intergenic 5b 25419 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.945;0.807, YRI:1.0;0.633 FUNCTIONAL_SNP rs1932237 chr9 21758768 Intergenic 5b 10965 CEU:1.0;1.0, CHB:1.0;0.938, JPT:0.94;0.834, YRI:0.82;0.617 FUNCTIONAL_SNP rs869330 chr9 21804617 Intron 5b 56814 CEU:1.0;0.924, CHB:0.94;0.835, JPT:0.943;0.765, YRI:1.0;0.524 FUNCTIONAL_SNP rs1345022 chr9 21785304 Intergenic 5b 37501 CEU:1.0;0.96, CHB:0.94;0.835, JPT:0.888;0.713 FUNCTIONAL_SNP rs1345025 chr9 21745412 Intergenic 6 2391 CEU:1.0;1.0, CHB:0.94;0.792, JPT:0.945;0.847, YRI:1.0;1.0 FUNCTIONAL_SNP rs7866885 chr9 21760621 Intergenic 6 12818 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.942;0.839 FUNCTIONAL_SNP rs1561651 chr9 21742746 Intergenic 6 5057 CEU:1.0;1.0, CHB:0.94;0.792, JPT:0.946;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs1414235 chr9 21726306 Intergenic 6 21497 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.851, YRI:1.0;0.857 FUNCTIONAL_SNP rs1414237 chr9 21732912 Intergenic 6 14891 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.857 FUNCTIONAL_SNP rs1414238 chr9 21737149 Intergenic 6 10654 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.857 FUNCTIONAL_SNP rs1414248 chr9 21750884 Intergenic 6 3081 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.931 FUNCTIONAL_SNP rs10757238 chr9 21732466 Intergenic 6 15337 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.857 FUNCTIONAL_SNP rs7045768 chr9 21770709 Intergenic 6 22906 CEU:1.0;1.0, CHB:1.0;0.94, JPT:0.945;0.847, YRI:1.0;0.587 FUNCTIONAL_SNP rs7847574 chr9 21720481 Intergenic 6 27322 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.719 FUNCTIONAL_SNP rs6475555 chr9 21716997 Intergenic 6 30806 CEU:0.958;0.848, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.587 FUNCTIONAL_SNP rs2027163 chr9 21738133 Intergenic 6 9670 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;0.881, YRI:1.0;0.813 FUNCTIONAL_SNP rs7866540 chr9 21760396 Intergenic 6 12593 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851 FUNCTIONAL_SNP rs1335502 chr9 21736274 Intergenic 6 11529 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.856 FUNCTIONAL_SNP rs2218220 chr9 21756089 Intergenic 6 8286 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851, YRI:0.924;0.743 FUNCTIONAL_SNP rs9695494 chr9 21727799 Intergenic 6 20004 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.857, YRI:1.0;0.856 FUNCTIONAL_SNP rs7027989 chr9 21817754 Intron 6 69951 CEU:0.92;0.846, CHB:0.916;0.542, JPT:0.935;0.619, YRI:1.0;0.587 FUNCTIONAL_SNP rs6475556 chr9 21718297 Intergenic 6 29506 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.853, YRI:1.0;0.685 FUNCTIONAL_SNP rs6475557 chr9 21718479 Intergenic 6 29324 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;0.853, YRI:1.0;0.719 FUNCTIONAL_SNP rs2119465 chr9 21723709 Intergenic 6 24094 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.719 FUNCTIONAL_SNP rs2119467 chr9 21746107 Intergenic 6 1696 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;1.0 FUNCTIONAL_SNP rs6475566 chr9 21733500 Intergenic 6 14303 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.857 FUNCTIONAL_SNP rs7854990 chr9 21725962 Intergenic 6 21841 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.857, YRI:1.0;0.857 FUNCTIONAL_SNP rs2891159 chr9 21747672 Intergenic 6 131 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs2891166 chr9 21726819 Intergenic 6 20984 CEU:1.0;1.0, CHB:1.0;0.891, JPT:1.0;0.816, YRI:1.0;0.857 FUNCTIONAL_SNP rs4352937 chr9 21747749 Intergenic 6 54 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs7851439 chr9 21721248 Intergenic 6 26555 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.719 FUNCTIONAL_SNP rs10811596 chr9 21720826 Intergenic 6 26977 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.857, YRI:0.909;0.65 FUNCTIONAL_SNP rs4595216 chr9 21719872 Intergenic 6 27931 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.719 FUNCTIONAL_SNP rs1542076 chr9 21790755 Intergenic 6 42952 CEU:1.0;0.924, CHB:0.94;0.835, JPT:0.943;0.765 FUNCTIONAL_SNP rs869329 chr9 21804693 Intron 6 56890 CEU:1.0;0.924, CHB:0.885;0.783, JPT:0.943;0.765, YRI:1.0;0.587 FUNCTIONAL_SNP rs2210777 chr9 21721455 Intergenic 6 26348 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.857, YRI:1.0;0.719 FUNCTIONAL_SNP rs2210778 chr9 21721585 Intergenic 6 26218 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.719 FUNCTIONAL_SNP rs7021538 chr9 21733204 Intergenic 6 14599 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.719 FUNCTIONAL_SNP rs10119658 chr9 21757590 Intergenic 6 9787 CEU:1.0;1.0, YRI:0.908;0.757 FUNCTIONAL_SNP rs10116090 chr9 21723055 Intergenic 6 24748 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;0.855, YRI:1.0;0.719 FUNCTIONAL_SNP rs12344842 chr9 21793177 Intergenic 7 45374 CEU:1.0;0.961, CHB:0.94;0.835, JPT:0.943;0.765 FUNCTIONAL_SNP rs7846943 chr9 21720108 Intergenic 7 27695 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.828 FUNCTIONAL_SNP rs7860576 chr9 21714920 Intergenic 7 32883 CEU:0.947;0.852, YRI:1.0;0.552 FUNCTIONAL_SNP rs1414241 chr9 21744392 Intergenic 7 3411 CEU:1.0;1.0, CHB:0.94;0.792, JPT:0.946;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs1414229 chr9 21773940 Intergenic 7 26137 CEU:1.0;0.888, CHB:1.0;0.945, JPT:0.946;0.851 FUNCTIONAL_SNP rs10965127 chr9 21778976 Intergenic 7 31173 CEU:1.0;1.0, CHB:0.943;0.888, JPT:0.945;0.807 FUNCTIONAL_SNP rs1414240 chr9 21743650 Intergenic 7 4153 CEU:1.0;1.0, CHB:0.94;0.792, JPT:0.946;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs1414246 chr9 21750075 Intergenic 7 2272 CEU:1.0;1.0, CHB:1.0;0.929, JPT:0.942;0.839, YRI:1.0;0.707 FUNCTIONAL_SNP rs10757236 chr9 21715890 Intergenic 7 31913 CEU:1.0;0.888, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.719 FUNCTIONAL_SNP rs10757237 chr9 21727369 Intergenic 7 20434 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.857, YRI:1.0;0.856 FUNCTIONAL_SNP rs10757240 chr9 21734449 Intergenic 7 13354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.849, YRI:1.0;0.855 FUNCTIONAL_SNP rs7865620 chr9 21719996 Intergenic 7 27807 CEU:1.0;1.0, CHB:0.943;0.889, JPT:1.0;0.86, YRI:1.0;0.719 FUNCTIONAL_SNP rs10757242 chr9 21739592 Intergenic 7 8211 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;0.857 FUNCTIONAL_SNP rs7037577 chr9 21772037 Intergenic 7 24234 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.946;0.851 FUNCTIONAL_SNP rs1832076 chr9 21726664 Intergenic 7 21139 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.857 FUNCTIONAL_SNP rs935053 chr9 21783922 Intergenic 7 36119 CEU:1.0;1.0, CHB:0.874;0.72 FUNCTIONAL_SNP rs2027162 chr9 21737916 Intergenic 7 9887 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:0.764;0.584 FUNCTIONAL_SNP rs7847070 chr9 21720225 Intergenic 7 27578 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.719 FUNCTIONAL_SNP rs7033503 chr9 21799598 Intergenic 7 51795 CEU:1.0;0.888, CHB:0.937;0.782, JPT:0.941;0.725, YRI:1.0;0.653 FUNCTIONAL_SNP rs7852710 chr9 21760254 Intergenic 7 12451 CEU:1.0;1.0, CHB:1.0;0.943, JPT:0.946;0.851 FUNCTIONAL_SNP rs10811605 chr9 21738444 Intergenic 7 9359 CEU:1.0;1.0, CHB:1.0;0.937, JPT:0.939;0.832, YRI:1.0;0.8 FUNCTIONAL_SNP rs10757254 chr9 21775061 Intergenic 7 27258 CEU:1.0;1.0, CHB:1.0;0.934, JPT:0.944;0.845, YRI:1.0;0.563 FUNCTIONAL_SNP rs7038708 chr9 21788081 Intergenic 7 40278 CEU:1.0;1.0 FUNCTIONAL_SNP rs10811604 chr9 21738437 Intergenic 7 9366 CEU:1.0;1.0, CHB:1.0;0.943, JPT:0.945;0.807, YRI:1.0;0.677 FUNCTIONAL_SNP rs6475562 chr9 21725765 Intergenic 7 22038 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.857, YRI:1.0;0.719 FUNCTIONAL_SNP rs6475576 chr9 21765601 Intergenic 7 17798 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.945;0.807, YRI:0.842;0.658 FUNCTIONAL_SNP rs7018772 chr9 21787402 Intergenic 7 39599 CEU:1.0;1.0, CHB:0.939;0.833, JPT:0.941;0.759 FUNCTIONAL_SNP rs2119466 chr9 21745990 Intergenic 7 1813 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs6475564 chr9 21728683 Intergenic 7 19120 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:0.849;0.627 FUNCTIONAL_SNP rs7856941 chr9 21761322 Intergenic 7 13519 CEU:1.0;1.0, CHB:0.94;0.883, JPT:0.946;0.851, YRI:0.848;0.625 FUNCTIONAL_SNP rs9644858 chr9 21741050 Intergenic 7 6753 CEU:1.0;1.0, CHB:0.94;0.792, JPT:0.946;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs7865156 chr9 21719375 Intergenic 7 28428 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.943;0.802, YRI:1.0;0.719 FUNCTIONAL_SNP rs10757241 chr9 21734480 Intergenic 7 13323 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;0.844, YRI:0.921;0.786 FUNCTIONAL_SNP rs7852900 chr9 21746796 Intergenic 7 1007 CEU:1.0;1.0, CHB:1.0;0.929, JPT:1.0;0.882, YRI:1.0;1.0 FUNCTIONAL_SNP rs7851460 chr9 21719507 Intergenic 7 28296 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.891, YRI:1.0;0.716 FUNCTIONAL_SNP rs1372057 chr9 21747110 Intergenic 7 693 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs1542074 chr9 21786304 Intergenic 7 38501 CEU:1.0;1.0, CHB:0.94;0.835, JPT:0.943;0.765 FUNCTIONAL_SNP rs1542075 chr9 21790669 Intergenic 7 42866 CEU:1.0;0.961, CHB:0.94;0.835, JPT:0.943;0.765 FUNCTIONAL_SNP rs7866787 chr9 21760639 Intergenic 7 12836 CEU:1.0;0.96, CHB:1.0;0.938, JPT:0.939;0.882 FUNCTIONAL_SNP rs7021012 chr9 21775957 Intergenic 7 28154 CEU:1.0;1.0, CHB:1.0;0.942, JPT:0.947;0.898 FUNCTIONAL_SNP rs2210780 chr9 21721714 Intergenic 7 26089 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.86, YRI:1.0;0.719 FUNCTIONAL_SNP rs10738597 chr9 21746396 Intergenic 7 1407 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs950770 chr9 21741662 Intergenic 7 6141 CEU:1.0;1.0, CHB:0.94;0.792, JPT:0.946;0.851, YRI:1.0;0.857 LEAD_SNP rs7023329 chr9 21816528 Intron 7 ASSOCIATION 19578364 Melanoma 6.39794000867 MTAP FUNCTIONAL_SNP rs3927737 chr9 21827992 Intron 5b 11464 CEU:0.917;0.84 FUNCTIONAL_SNP rs869330 chr9 21804617 Intron 5b 11911 CEU:0.916;0.806 FUNCTIONAL_SNP rs7027989 chr9 21817754 Intron 6 1226 CEU:0.916;0.806 FUNCTIONAL_SNP rs3928894 chr9 21818310 Intron 6 1782 CEU:0.957;0.845 FUNCTIONAL_SNP rs1542076 chr9 21790755 Intergenic 6 25773 CEU:0.916;0.806 FUNCTIONAL_SNP rs869329 chr9 21804693 Intron 6 11835 CEU:0.916;0.806 FUNCTIONAL_SNP rs7023474 chr9 21816646 Intron 7 118 CEU:1.0;0.885 LEAD_SNP rs1063192 chr9 22003367 Exon,non-coding 5b ASSOCIATION 20548946 Vertical cup-disc ratio 14.3979400087 CDKN2B FUNCTIONAL_SNP rs564398 chr9 22029547 Exon,non-coding 6 26180 CEU:1.0;0.885, JPT:1.0;0.888 FUNCTIONAL_SNP rs523096 chr9 22019129 Intron 3a 15762 CEU:0.957;0.845, JPT:1.0;0.888 FUNCTIONAL_SNP rs2069418 chr9 22009698 Intron 4 6331 CEU:1.0;0.923, JPT:1.0;0.863 FUNCTIONAL_SNP rs2157719 chr9 22033366 Intron 5b 29999 CEU:1.0;0.922, JPT:1.0;0.779 FUNCTIONAL_SNP rs634537 chr9 22032152 Intron 5b 28785 CEU:1.0;0.848, JPT:1.0;0.877 FUNCTIONAL_SNP rs1333037 chr9 22040765 Intron 5b 37398 CEU:1.0;0.885, JPT:1.0;0.888 FUNCTIONAL_SNP rs1412829 chr9 22043926 Intron 5b 40559 CEU:1.0;0.845, JPT:1.0;0.779 FUNCTIONAL_SNP rs1008878 chr9 22036112 Intron 6 32745 CEU:1.0;0.885, JPT:1.0;0.888 FUNCTIONAL_SNP rs7030641 chr9 22054040 Intron 6 50673 CEU:1.0;0.849, JPT:1.0;0.888 FUNCTIONAL_SNP rs7865618 chr9 22031005 Intron 7 27638 CEU:1.0;0.96, JPT:1.0;0.888 FUNCTIONAL_SNP rs944801 chr9 22051670 Intron 7 48303 CEU:1.0;0.849, JPT:1.0;0.863 FUNCTIONAL_SNP rs1556515 chr9 22036367 Intron 7 33000 CEU:1.0;0.849, JPT:1.0;0.888 FUNCTIONAL_SNP rs1360589 chr9 22045317 Intron 7 41950 CEU:1.0;0.849, JPT:1.0;0.888 FUNCTIONAL_SNP rs543830 chr9 22026639 Intron 7 23272 CEU:1.0;0.849, JPT:1.0;0.877 FUNCTIONAL_SNP rs518394 chr9 22019673 Intron 7 16306 CEU:0.957;0.845, JPT:1.0;0.888 FUNCTIONAL_SNP rs679038 chr9 22029080 Intron 7 25713 CEU:1.0;0.849, JPT:1.0;0.888 LEAD_SNP rs564398 chr9 22029547 Exon,non-coding 6 ASSOCIATION 17463249 Type 2 diabetes 6.0 CDKN2BAS LEAD_SNP rs7865618 chr9 22031005 Intron 7 ASSOCIATION 21606135 Coronary heart disease 26.6989700043 CDKN2BAS FUNCTIONAL_SNP rs1063192 chr9 22003367 Exon,non-coding 5b 27638 CEU:1.0;0.96, JPT:1.0;0.888 FUNCTIONAL_SNP rs564398 chr9 22029547 Exon,non-coding 6 1458 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs523096 chr9 22019129 Intron 3a 11876 CEU:0.916;0.806, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2069418 chr9 22009698 Intron 4 21307 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2157719 chr9 22033366 Intron 5b 2361 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs634537 chr9 22032152 Intron 5b 1147 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1333037 chr9 22040765 Intron 5b 9760 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1412829 chr9 22043926 Intron 5b 12921 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs1008878 chr9 22036112 Intron 6 5107 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7030641 chr9 22054040 Intron 6 23035 CEU:1.0;0.884, CHB:1.0;0.823, JPT:1.0;1.0 FUNCTIONAL_SNP rs944801 chr9 22051670 Intron 7 20665 CEU:1.0;0.884, CHB:1.0;0.823, JPT:1.0;1.0 FUNCTIONAL_SNP rs1556515 chr9 22036367 Intron 7 5362 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1360589 chr9 22045317 Intron 7 14312 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs543830 chr9 22026639 Intron 7 4366 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs518394 chr9 22019673 Intron 7 11332 CEU:0.916;0.806, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs679038 chr9 22029080 Intron 7 1925 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2157719 chr9 22033366 Intron 5b ASSOCIATION 21531791 Glioma 15.3010299957 CDKN2BAS FUNCTIONAL_SNP rs1063192 chr9 22003367 Exon,non-coding 5b 29999 CEU:1.0;0.922, JPT:1.0;0.779 FUNCTIONAL_SNP rs564398 chr9 22029547 Exon,non-coding 6 3819 CEU:0.958;0.881, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs523096 chr9 22019129 Intron 3a 14237 CEU:0.918;0.843, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs2069418 chr9 22009698 Intron 4 23668 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs634537 chr9 22032152 Intron 5b 1214 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs1333037 chr9 22040765 Intron 5b 7399 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs1412829 chr9 22043926 Intron 5b 10560 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs615552 chr9 22026077 Intron 6 7289 CEU:0.944;0.844, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1008878 chr9 22036112 Intron 6 2746 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs7030641 chr9 22054040 Intron 6 20674 CEU:1.0;0.921, CHB:1.0;0.823, JPT:1.0;0.877 FUNCTIONAL_SNP rs7865618 chr9 22031005 Intron 7 2361 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs944801 chr9 22051670 Intron 7 18304 CEU:1.0;0.921, CHB:1.0;0.823, JPT:1.0;1.0 FUNCTIONAL_SNP rs1556515 chr9 22036367 Intron 7 3001 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs1360589 chr9 22045317 Intron 7 11951 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs543830 chr9 22026639 Intron 7 6727 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;0.863 FUNCTIONAL_SNP rs518394 chr9 22019673 Intron 7 13693 CEU:0.918;0.843, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs679038 chr9 22029080 Intron 7 4286 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;0.877 LEAD_SNP rs1412829 chr9 22043926 Intron 5b ASSOCIATION 20512145 Nasopharyngeal carcinoma 6.30102999566 CDKN2BAS ASSOCIATION 19578366 Glioma (high-grade) 9.69897000434 CDKN2BAS LEAD_SNP rs1011970 chr9 22062134 Intron 7 ASSOCIATION 20453838 Breast cancer 7.52287874528 CDKN2BAS LEAD_SNP rs4977756 chr9 22068652 Intron 7 ASSOCIATION 21532571 Glaucoma 14.0 CDKN2BAS ASSOCIATION 19578367 Glioma 14.15490196 CDKN2BAS FUNCTIONAL_SNP rs1333039 chr9 22065657 Intron 5b 2995 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs10965224 chr9 22067276 Intron 5b 1376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10811651 chr9 22067830 Intron 7 822 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8181050 chr9 22064391 Intron 7 4261 CEU:1.0;1.0, JPT:1.0;0.91 FUNCTIONAL_SNP rs1537378 chr9 22061614 Intron 7 7038 CEU:1.0;0.958, JPT:1.0;0.91 FUNCTIONAL_SNP rs2184061 chr9 22061562 Intron 7 7090 CEU:1.0;0.958, YRI:1.0;0.927 LEAD_SNP rs1333040 chr9 22083404 Intron 7 ASSOCIATION 20364137 Intracranial aneurysm 21.6989700043 CDKN2BAS ASSOCIATION 18997786 Intracranial aneurysm 10.0 CDKN2BAS LEAD_SNP rs4977574 chr9 22098574 Intron 2c ASSOCIATION 21378990 Coronary heart disease 22.0 CDKN2BAS ASSOCIATION 21378988 Coronary heart disease 24.6989700043 CDKN2BAS ASSOCIATION 19198609 Myocardial infarction (early onset) 43.5228787453 CDKN2BAS FUNCTIONAL_SNP rs1333047 chr9 22124504 Intergenic 2a 25930 CEU:0.96;0.885 FUNCTIONAL_SNP rs10757272 chr9 22088260 Intron 2c 10314 CEU:1.0;1.0 FUNCTIONAL_SNP rs10757278 chr9 22124477 Intergenic 4 25903 CEU:0.955;0.874, CHB:1.0;0.897, JPT:1.0;0.886, YRI:1.0;1.0 FUNCTIONAL_SNP rs2891168 chr9 22098619 Intron 4 45 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs4977575 chr9 22124744 Intergenic 4 26170 CEU:0.96;0.885 FUNCTIONAL_SNP rs1333042 chr9 22103813 Intron 4 5239 CEU:1.0;1.0 FUNCTIONAL_SNP rs1537373 chr9 22103341 Intron 4 4767 CEU:1.0;1.0 FUNCTIONAL_SNP rs7341786 chr9 22112241 Intron 4 13667 CEU:1.0;0.889 FUNCTIONAL_SNP rs944797 chr9 22115286 Intron 5b 16712 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2383206 chr9 22115026 Intron 5b 16452 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10757269 chr9 22072264 Intron 6 26310 CEU:1.0;0.925 FUNCTIONAL_SNP rs7859362 chr9 22105927 Intron 6 7353 CEU:1.0;0.925 FUNCTIONAL_SNP rs1333043 chr9 22106731 Intron 6 8157 CEU:1.0;0.925 FUNCTIONAL_SNP rs1333046 chr9 22124123 Intergenic 6 25549 CEU:1.0;0.962, CHB:0.951;0.863, JPT:1.0;0.952 FUNCTIONAL_SNP rs10116277 chr9 22081397 Intron 6 17177 CEU:1.0;1.0 FUNCTIONAL_SNP rs10511701 chr9 22112599 Intron 6 14025 CEU:1.0;0.889, CHB:1.0;0.678 FUNCTIONAL_SNP rs7859727 chr9 22102165 Intron 7 3591 CEU:1.0;1.0 FUNCTIONAL_SNP rs1556516 chr9 22100176 Intron 7 1602 CEU:1.0;1.0 FUNCTIONAL_SNP rs1004638 chr9 22115589 Intron 7 17015 CEU:1.0;0.925 FUNCTIONAL_SNP rs10738607 chr9 22088094 Intron 7 10480 CEU:1.0;1.0 FUNCTIONAL_SNP rs10738609 chr9 22114495 Intron 7 15921 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.735 FUNCTIONAL_SNP rs1333048 chr9 22125347 Intergenic 7 26773 CEU:1.0;0.962, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs1333049 chr9 22125503 Intergenic 7 26929 CEU:0.96;0.885, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs10733376 chr9 22114469 Intron 7 15895 CEU:1.0;0.925 FUNCTIONAL_SNP rs10738610 chr9 22123766 Intergenic 7 25192 CEU:1.0;0.962, CHB:0.951;0.863, JPT:1.0;0.909, YRI:1.0;0.763 FUNCTIONAL_SNP rs6475606 chr9 22081850 Intron 7 16724 CEU:1.0;1.0 FUNCTIONAL_SNP rs1537370 chr9 22084310 Intron 7 14264 CEU:1.0;1.0 FUNCTIONAL_SNP rs1537371 chr9 22099568 Intron 7 994 CEU:1.0;1.0 FUNCTIONAL_SNP rs1537374 chr9 22116046 Intron 7 17472 CEU:1.0;0.925 FUNCTIONAL_SNP rs1537375 chr9 22116071 Intron 7 17497 CEU:1.0;0.925 FUNCTIONAL_SNP rs1412834 chr9 22110131 Intron 7 11557 CEU:1.0;0.925 FUNCTIONAL_SNP rs2383207 chr9 22115959 Intron 7 17385 CEU:1.0;0.925 FUNCTIONAL_SNP rs9632884 chr9 22072301 Intron 7 26273 CEU:1.0;0.852 LEAD_SNP rs10965235 chr9 22115105 Intron 5b ASSOCIATION 20601957 Endometriosis 11.2218487496 CDKN2BAS LEAD_SNP rs2383207 chr9 22115959 Intron 7 ASSOCIATION 20622881 Abdominal aortic aneurysm 7.69897000434 CDKN2BAS FUNCTIONAL_SNP rs1333047 chr9 22124504 Intergenic 2a 8545 CEU:1.0;0.889, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10757272 chr9 22088260 Intron 2c 27699 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4977574 chr9 22098574 Intron 2c 17385 CEU:1.0;0.925 FUNCTIONAL_SNP rs10757278 chr9 22124477 Intergenic 4 8518 CEU:1.0;0.878, CHB:1.0;0.546 FUNCTIONAL_SNP rs2891168 chr9 22098619 Intron 4 17340 CEU:1.0;0.925 FUNCTIONAL_SNP rs4977575 chr9 22124744 Intergenic 4 8785 CEU:1.0;0.889, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1333042 chr9 22103813 Intron 4 12146 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1537373 chr9 22103341 Intron 4 12618 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7341786 chr9 22112241 Intron 4 3718 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs944797 chr9 22115286 Intron 5b 673 CEU:1.0;1.0 FUNCTIONAL_SNP rs2383206 chr9 22115026 Intron 5b 933 CEU:1.0;1.0 FUNCTIONAL_SNP rs10757269 chr9 22072264 Intron 6 43695 CEU:0.921;0.848, JPT:0.907;0.514 FUNCTIONAL_SNP rs7859362 chr9 22105927 Intron 6 10032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;1.0 FUNCTIONAL_SNP rs1333043 chr9 22106731 Intron 6 9228 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;1.0 FUNCTIONAL_SNP rs1333046 chr9 22124123 Intergenic 6 8164 CEU:1.0;0.962, CHB:1.0;0.515 FUNCTIONAL_SNP rs10116277 chr9 22081397 Intron 6 34562 CEU:1.0;0.925, JPT:0.924;0.661, YRI:1.0;1.0 FUNCTIONAL_SNP rs10511701 chr9 22112599 Intron 6 3360 CEU:1.0;0.961, CHB:1.0;0.89, JPT:1.0;1.0 FUNCTIONAL_SNP rs7859727 chr9 22102165 Intron 7 13794 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10738607 chr9 22088094 Intron 7 27865 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1556516 chr9 22100176 Intron 7 15783 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1004638 chr9 22115589 Intron 7 370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10738610 chr9 22123766 Intergenic 7 7807 CEU:1.0;0.962, CHB:1.0;0.515 FUNCTIONAL_SNP rs10738609 chr9 22114495 Intron 7 1464 CEU:1.0;1.0 FUNCTIONAL_SNP rs1333048 chr9 22125347 Intergenic 7 9388 CEU:1.0;0.962, CHB:1.0;0.54 FUNCTIONAL_SNP rs1333049 chr9 22125503 Intergenic 7 9544 CEU:1.0;0.889, CHB:1.0;0.54 FUNCTIONAL_SNP rs10733376 chr9 22114469 Intron 7 1490 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;0.794, YRI:1.0;1.0 FUNCTIONAL_SNP rs6475606 chr9 22081850 Intron 7 34109 CEU:1.0;0.925, JPT:0.924;0.661, YRI:1.0;1.0 FUNCTIONAL_SNP rs1537370 chr9 22084310 Intron 7 31649 CEU:1.0;0.925, JPT:0.924;0.661 FUNCTIONAL_SNP rs1537371 chr9 22099568 Intron 7 16391 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1537374 chr9 22116046 Intron 7 87 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1537375 chr9 22116071 Intron 7 112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1412834 chr9 22110131 Intron 7 5828 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10757278 chr9 22124477 Intergenic 4 ASSOCIATION 17478679 Myocardial infarction 20.0 UBA52P6 - DMRTA1 FUNCTIONAL_SNP rs4977574 chr9 22098574 Intron 2c 25903 CEU:0.955;0.874, CHB:1.0;0.897, JPT:1.0;0.886, YRI:1.0;1.0 FUNCTIONAL_SNP rs10738610 chr9 22123766 Intergenic 7 711 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10738609 chr9 22114495 Intron 7 9982 CEU:1.0;0.885, CHB:1.0;0.899, JPT:0.936;0.824, YRI:1.0;1.0 LEAD_SNP rs1333049 chr9 22125503 Intergenic 7 ASSOCIATION 21606135 Coronary heart disease 57.15490196 UBA52P6 - DMRTA1 ASSOCIATION 17634449 Coronary heart disease 18.5228787453 UBA52P6 - DMRTA1 ASSOCIATION 17554300 Coronary heart disease 13.0 UBA52P6 - DMRTA1 FUNCTIONAL_SNP rs1333047 chr9 22124504 Intergenic 2a 999 CEU:1.0;1.0, CHB:1.0;0.514 FUNCTIONAL_SNP rs10757272 chr9 22088260 Intron 2c 37243 CEU:0.96;0.885, CHB:1.0;0.54 FUNCTIONAL_SNP rs4977574 chr9 22098574 Intron 2c 26929 CEU:0.96;0.885, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs1333045 chr9 22119195 Intron 3a 6308 CEU:1.0;0.815, CHB:1.0;0.952, JPT:1.0;0.952 FUNCTIONAL_SNP rs10757278 chr9 22124477 Intergenic 4 1026 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2891168 chr9 22098619 Intron 4 26884 CEU:0.96;0.885, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs4977575 chr9 22124744 Intergenic 4 759 CEU:1.0;1.0, CHB:1.0;0.514 FUNCTIONAL_SNP rs1333042 chr9 22103813 Intron 4 21690 CEU:0.96;0.885, CHB:1.0;0.54 FUNCTIONAL_SNP rs7341786 chr9 22112241 Intron 4 13262 CEU:1.0;0.855, CHB:1.0;0.54 FUNCTIONAL_SNP rs1537373 chr9 22103341 Intron 4 22162 CEU:0.96;0.885, CHB:1.0;0.533 FUNCTIONAL_SNP rs944797 chr9 22115286 Intron 5b 10217 CEU:1.0;0.889, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs2383206 chr9 22115026 Intron 5b 10477 CEU:1.0;0.889, CHB:1.0;0.911, JPT:1.0;0.907 FUNCTIONAL_SNP rs10757269 chr9 22072264 Intron 6 53239 CEU:0.958;0.815 FUNCTIONAL_SNP rs7859362 chr9 22105927 Intron 6 19576 CEU:1.0;0.889, CHB:1.0;0.54 FUNCTIONAL_SNP rs1333043 chr9 22106731 Intron 6 18772 CEU:1.0;0.889, CHB:1.0;0.54 FUNCTIONAL_SNP rs1333046 chr9 22124123 Intergenic 6 1380 CEU:1.0;0.925, CHB:1.0;0.954, JPT:1.0;1.0, YRI:0.935;0.822 FUNCTIONAL_SNP rs10116277 chr9 22081397 Intron 6 44106 CEU:0.96;0.885 FUNCTIONAL_SNP rs10511701 chr9 22112599 Intron 6 12904 CEU:1.0;0.855, CHB:1.0;0.716 FUNCTIONAL_SNP rs7859727 chr9 22102165 Intron 7 23338 CEU:0.959;0.883, CHB:1.0;0.54 FUNCTIONAL_SNP rs1556516 chr9 22100176 Intron 7 25327 CEU:0.96;0.885, CHB:1.0;0.54 FUNCTIONAL_SNP rs1004638 chr9 22115589 Intron 7 9914 CEU:1.0;0.889, CHB:1.0;0.54 FUNCTIONAL_SNP rs10738610 chr9 22123766 Intergenic 7 1737 CEU:1.0;0.925, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs10738607 chr9 22088094 Intron 7 37409 CEU:0.96;0.885, CHB:1.0;0.54 FUNCTIONAL_SNP rs10738609 chr9 22114495 Intron 7 11008 CEU:1.0;0.889, CHB:1.0;0.909, JPT:0.946;0.85 FUNCTIONAL_SNP rs1333048 chr9 22125347 Intergenic 7 156 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.927;0.525 FUNCTIONAL_SNP rs10733376 chr9 22114469 Intron 7 11034 CEU:1.0;0.889 FUNCTIONAL_SNP rs6475606 chr9 22081850 Intron 7 43653 CEU:0.96;0.885 FUNCTIONAL_SNP rs1537370 chr9 22084310 Intron 7 41193 CEU:0.96;0.885 FUNCTIONAL_SNP rs1537371 chr9 22099568 Intron 7 25935 CEU:0.96;0.885, CHB:1.0;0.54 FUNCTIONAL_SNP rs1537374 chr9 22116046 Intron 7 9457 CEU:1.0;0.889, CHB:1.0;0.54 FUNCTIONAL_SNP rs1537375 chr9 22116071 Intron 7 9432 CEU:1.0;0.889, CHB:1.0;0.532 FUNCTIONAL_SNP rs1412834 chr9 22110131 Intron 7 15372 CEU:1.0;0.889, CHB:1.0;0.533 FUNCTIONAL_SNP rs2383207 chr9 22115959 Intron 7 9544 CEU:1.0;0.889, CHB:1.0;0.54 LEAD_SNP rs7020996 chr9 22129579 Intergenic 7 ASSOCIATION 18372903 Type 2 diabetes 6.69897000434 UBA52P6 - DMRTA1 LEAD_SNP rs2383208 chr9 22132076 Intergenic 7 ASSOCIATION 19401414 Type 2 diabetes 28.6989700043 UBA52P6 - DMRTA1 LEAD_SNP rs10965250 chr9 22133284 Intergenic 7 ASSOCIATION 20581827 Type 2 diabetes 10.0 UBA52P6 - DMRTA1 FUNCTIONAL_SNP rs2383208 chr9 22132076 Intergenic 7 1208 CEU:1.0;0.944, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs10811661 chr9 22134094 Intergenic 7 810 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;0.95 LEAD_SNP rs10811661 chr9 22134094 Intergenic 7 ASSOCIATION 19056611 Type 2 diabetes 6.15490195999 UBA52P6 - DMRTA1 ASSOCIATION 17463246 Type 2 diabetes 7.30102999566 UBA52P6 - DMRTA1 ASSOCIATION 17463248 Type 2 diabetes 14.096910013 UBA52P6 - DMRTA1 ASSOCIATION 17463249 Type 2 diabetes 5.30102999566 UBA52P6 - DMRTA1 LEAD_SNP rs1333051 chr9 22136489 Intergenic 5b ASSOCIATION 21573907 Type 2 diabetes 9.22184874962 UBA52P6 - DMRTA1 LEAD_SNP rs961831 chr9 22362104 Intergenic 5b ASSOCIATION 20691247 Personality dimensions 5.15490195999 UBA52P6 - DMRTA1 LEAD_SNP rs613391 chr9 22670715 Intron 7 ASSOCIATION 19197348 Quantitative traits 5.30102999566 DMRTA1 - ELAVL2 FUNCTIONAL_SNP rs976731 chr9 22695593 Intron 5b 24878 CEU:0.955;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs976730 chr9 22695667 Intron 6 24952 CEU:0.955;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs639548 chr9 22680267 Intron 7 9552 CEU:1.0;0.918, CHB:1.0;0.903, JPT:1.0;0.951, YRI:1.0;1.0 FUNCTIONAL_SNP rs578315 chr9 22664213 Intron 7 6502 CEU:0.956;0.915, CHB:1.0;0.95, JPT:1.0;0.951, YRI:1.0;1.0 LEAD_SNP rs10811771 chr9 22770886 Intron 7 ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 6.09691001301 DMRTA1 - ELAVL2 LEAD_SNP rs4246856 chr9 24092072 Intergenic 7 ASSOCIATION 21502573 D-dimer levels 5.22184874962 ELAVL2 - TUSC1 FUNCTIONAL_SNP rs10966205 chr9 24095607 Intergenic 6 3535 CEU:1.0;1.0, CHB:0.935;0.702, YRI:0.888;0.71 FUNCTIONAL_SNP rs4977914 chr9 24097459 Intergenic 6 5387 CEU:1.0;1.0, CHB:0.873;0.645, YRI:0.898;0.732 FUNCTIONAL_SNP rs4445317 chr9 24092667 Intergenic 7 595 CEU:1.0;1.0, CHB:1.0;0.754, JPT:1.0;0.785, YRI:1.0;0.88 FUNCTIONAL_SNP rs10966206 chr9 24096480 Intergenic 7 4408 CEU:1.0;1.0, CHB:1.0;0.765, JPT:1.0;0.777, YRI:0.888;0.71 FUNCTIONAL_SNP rs2225614 chr9 24111280 Intergenic 7 19208 CEU:1.0;1.0, CHB:0.935;0.702, YRI:0.888;0.71 FUNCTIONAL_SNP rs4977912 chr9 24091818 Intergenic 7 254 CEU:1.0;1.0, CHB:1.0;0.773, JPT:1.0;0.783, YRI:1.0;0.704 FUNCTIONAL_SNP rs4977915 chr9 24097917 Intergenic 7 5845 CEU:1.0;1.0, CHB:0.881;0.664, YRI:0.899;0.733 FUNCTIONAL_SNP rs4977919 chr9 24112957 Intergenic 7 20885 CEU:1.0;0.875 LEAD_SNP rs2225614 chr9 24111280 Intergenic 7 ASSOCIATION 19197348 Quantitative traits 5.52287874528 ELAVL2 - TUSC1 FUNCTIONAL_SNP rs10966205 chr9 24095607 Intergenic 6 15673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs4977914 chr9 24097459 Intergenic 6 13821 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.944;0.892, YRI:1.0;1.0 FUNCTIONAL_SNP rs4977915 chr9 24097917 Intergenic 7 13363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;1.0 LEAD_SNP rs12552736 chr9 25449122 Intergenic 7 ASSOCIATION 20031603 RR interval (heart rate) 5.69897000434 ELAVL2 - TUSC1 FUNCTIONAL_SNP rs13294978 chr9 25430624 Intergenic 6 18498 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.603 FUNCTIONAL_SNP rs13287690 chr9 25432727 Intergenic 6 16395 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13295352 chr9 25430845 Intergenic 6 18277 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13294801 chr9 25430584 Intergenic 6 18538 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.551 FUNCTIONAL_SNP rs12554484 chr9 25429510 Intergenic 6 19612 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.5 FUNCTIONAL_SNP rs12553100 chr9 25429136 Intergenic 7 19986 CEU:0.905;0.819, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.551 FUNCTIONAL_SNP rs13288261 chr9 25436301 Intergenic 7 12821 CEU:1.0;0.846, YRI:0.877;0.52 FUNCTIONAL_SNP rs13287719 chr9 25432784 Intergenic 7 16338 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs13300284 chr9 25452812 Intergenic 7 ASSOCIATION 20031603 RR interval (heart rate) 5.39794000867 ELAVL2 - TUSC1 FUNCTIONAL_SNP rs13300165 chr9 25452920 Intergenic 3a 108 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13295034 chr9 25467794 Intergenic 6 14982 CEU:1.0;1.0 FUNCTIONAL_SNP rs12377151 chr9 25457412 Intergenic 6 4600 CEU:1.0;0.823 FUNCTIONAL_SNP rs13283654 chr9 25435873 Intergenic 6 16939 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12341096 chr9 25480783 Intergenic 6 27971 CEU:1.0;1.0 FUNCTIONAL_SNP rs10966921 chr9 25457130 Intergenic 7 4318 CEU:1.0;1.0 FUNCTIONAL_SNP rs13296666 chr9 25434044 Intergenic 7 18768 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13283632 chr9 25435828 Intergenic 7 16984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17774666 chr9 25481979 Intergenic 7 29167 CEU:1.0;1.0 FUNCTIONAL_SNP rs13289164 chr9 25436091 Intergenic 7 16721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10116415 chr9 25452103 Intergenic 7 709 CEU:1.0;0.878 LEAD_SNP rs17774966 chr9 25551357 Intergenic 6 ASSOCIATION 21116278 Entorhinal cortical thickness 5.09691001301 ELAVL2 - TUSC1 LEAD_SNP rs10812428 chr9 26614847 Intergenic 7 ASSOCIATION 19483685 Drug-induced liver injury (flucloxacillin) 6.0 TUSC1 - C9orf82 LEAD_SNP rs1889899 chr9 26789940 Intergenic 5b ASSOCIATION 19247474 Smoking behavior 5.22184874962 TUSC1 - C9orf82 FUNCTIONAL_SNP rs10511775 chr9 26788498 Intergenic 7 1442 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.863, YRI:1.0;0.899 LEAD_SNP rs7045881 chr9 26935996 Intron 4 ASSOCIATION 20185149 Schizophrenia 5.69897000434 PLAA FUNCTIONAL_SNP rs7035755 chr9 26945976 Intron 4 9980 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.719 FUNCTIONAL_SNP rs7039400 chr9 26946249 Intron 5b 10253 CEU:1.0;1.0, YRI:1.0;0.719 FUNCTIONAL_SNP rs17693846 chr9 26785373 Intron 6 150623 CEU:1.0;0.923 FUNCTIONAL_SNP rs7860542 chr9 26899130 Intergenic 6 36866 CEU:1.0;0.853 FUNCTIONAL_SNP rs17840677 chr9 26777704 Intron 7 158292 CEU:1.0;0.923 FUNCTIONAL_SNP rs10967625 chr9 26962488 Intron 7 26492 CEU:1.0;0.862, YRI:0.832;0.593 FUNCTIONAL_SNP rs12338262 chr9 26800359 Intergenic 7 135637 CEU:0.922;0.849 FUNCTIONAL_SNP rs892571 chr9 26774036 Intron 7 161960 CEU:1.0;0.923 FUNCTIONAL_SNP rs12000467 chr9 26808068 Intergenic 7 127928 CEU:1.0;0.923 FUNCTIONAL_SNP rs17693955 chr9 26797599 Intergenic 7 138397 CEU:1.0;0.923 FUNCTIONAL_SNP rs7872881 chr9 26838839 Intergenic 7 97157 CEU:1.0;1.0 FUNCTIONAL_SNP rs1880947 chr9 26772805 Intron 7 163191 CEU:1.0;0.923 FUNCTIONAL_SNP rs16910752 chr9 26758233 Intron 7 177763 CEU:1.0;0.923 FUNCTIONAL_SNP rs12352441 chr9 26962769 Intron 7 26773 CEU:1.0;0.862, YRI:0.832;0.593 FUNCTIONAL_SNP rs17755607 chr9 26785734 Intron 7 150262 CEU:1.0;0.923 LEAD_SNP rs7046653 chr9 27490967 Intron 7 ASSOCIATION 18615156 Response to TNF antagonist treatment 6.30102999566 MOBKL2B FUNCTIONAL_SNP rs7041409 chr9 27487221 Intron 3a 3746 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10738774 chr9 27506051 Intron 4 15084 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs868856 chr9 27489251 Intron 4 1716 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1319236 chr9 27507209 Intron 5b 16242 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.803 FUNCTIONAL_SNP rs10812604 chr9 27496661 Intron 6 5694 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10812610 chr9 27533984 Intergenic 6 ASSOCIATION 20445134 Heart failure 5.30102999566 IFNK - C9orf72 FUNCTIONAL_SNP rs903603 chr9 27529316 Intron 5b 4668 CEU:0.957;0.811, CHB:0.946;0.85, JPT:0.942;0.888 FUNCTIONAL_SNP rs4879541 chr9 27533452 Intergenic 5b 532 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.602 LEAD_SNP rs2814707 chr9 27536397 Intergenic 5b ASSOCIATION 19734901 Amyotrophic lateral sclerosis 8.15490195999 IFNK - C9orf72 FUNCTIONAL_SNP rs774357 chr9 27559835 Exon,non-coding 7 23438 CEU:1.0;0.939, CHB:1.0;0.586, JPT:1.0;0.823, YRI:1.0;0.618 FUNCTIONAL_SNP rs700782 chr9 27526047 Exon,non-coding 6 10350 CEU:0.937;0.826, YRI:1.0;0.944 FUNCTIONAL_SNP rs2492812 chr9 27499627 Intron 2b 36770 CEU:0.938;0.879, YRI:0.882;0.778 FUNCTIONAL_SNP rs10967965 chr9 27497988 Intron 4 38409 CEU:1.0;0.845 FUNCTIONAL_SNP rs17779457 chr9 27488092 Intron 4 48305 CEU:0.938;0.879, YRI:0.882;0.778 FUNCTIONAL_SNP rs7019351 chr9 27491262 Intron 4 45135 CEU:0.937;0.826 FUNCTIONAL_SNP rs3849941 chr9 27538948 Intergenic 4 2551 CEU:0.938;0.879, CHB:1.0;0.586, JPT:1.0;0.823 FUNCTIONAL_SNP rs3849939 chr9 27525221 Intron 5a 11176 CEU:0.937;0.826 FUNCTIONAL_SNP rs2453552 chr9 27527512 Intron 5b 8885 CEU:0.938;0.879, YRI:1.0;0.659 FUNCTIONAL_SNP rs9969832 chr9 27493063 Intron 5b 43334 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs895022 chr9 27484371 Intron 5b 52026 CEU:0.938;0.879, YRI:0.869;0.669 FUNCTIONAL_SNP rs2453554 chr9 27561800 Intron 5b 25403 CEU:1.0;0.939, CHB:1.0;0.586, JPT:1.0;0.823, YRI:1.0;0.602 FUNCTIONAL_SNP rs2453555 chr9 27563868 Intron 5b 27471 CEU:1.0;0.932, CHB:1.0;0.658, JPT:1.0;0.823, YRI:1.0;0.563 FUNCTIONAL_SNP rs812858 chr9 27545467 Intergenic 5b 9070 CEU:1.0;0.939, CHB:1.0;0.586, JPT:1.0;0.823, YRI:0.921;0.612 FUNCTIONAL_SNP rs700795 chr9 27520508 Intron 5b 15889 CEU:0.938;0.879, YRI:0.941;0.886 FUNCTIONAL_SNP rs3849943 chr9 27543382 Intergenic 6 6985 CEU:1.0;0.939, CHB:1.0;0.586, JPT:1.0;0.823 FUNCTIONAL_SNP rs2492818 chr9 27505639 Intron 6 30758 CEU:0.938;0.879, YRI:0.931;0.763 FUNCTIONAL_SNP rs895021 chr9 27484911 Intron 6 51486 CEU:0.938;0.879, YRI:0.869;0.668 FUNCTIONAL_SNP rs2453565 chr9 27551040 Intron 6 14643 CEU:1.0;0.939, CHB:1.0;0.586, JPT:1.0;0.823, YRI:1.0;0.618 FUNCTIONAL_SNP rs2783009 chr9 27514584 Intron 6 21813 CEU:0.938;0.879, YRI:0.879;0.689 FUNCTIONAL_SNP rs814030 chr9 27515194 Intron 6 21203 CEU:0.938;0.879, YRI:0.879;0.689 FUNCTIONAL_SNP rs3849942 chr9 27543281 Intergenic 6 6884 CEU:0.934;0.82, CHB:1.0;0.586, JPT:1.0;0.823 FUNCTIONAL_SNP rs2484314 chr9 27511284 Intron 6 25113 CEU:1.0;0.928, YRI:0.757;0.53 FUNCTIONAL_SNP rs2477523 chr9 27536894 Intergenic 6 497 CEU:1.0;0.926, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;0.836 FUNCTIONAL_SNP rs2814709 chr9 27513298 Intron 6 23099 CEU:0.938;0.879, YRI:0.935;0.773 FUNCTIONAL_SNP rs700791 chr9 27545960 Intergenic 6 9563 CEU:1.0;0.926, CHB:1.0;0.586, JPT:1.0;0.79, YRI:1.0;0.668 FUNCTIONAL_SNP rs2764331 chr9 27492934 Intron 7 43463 CEU:0.938;0.879, YRI:0.877;0.769 FUNCTIONAL_SNP rs2492815 chr9 27490296 Intron 7 46101 CEU:0.937;0.878, YRI:0.871;0.758 FUNCTIONAL_SNP rs12115670 chr9 27486172 Intron 7 50225 CEU:0.938;0.879, YRI:0.869;0.669 FUNCTIONAL_SNP rs2440619 chr9 27514323 Intron 7 22074 CEU:0.938;0.879, YRI:0.879;0.689 FUNCTIONAL_SNP rs12554036 chr9 27509211 Intron 7 27186 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2246591 chr9 27507804 Intron 7 28593 CEU:0.938;0.879, YRI:0.82;0.635 FUNCTIONAL_SNP rs9969707 chr9 27491104 Intron 7 45293 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7036117 chr9 27507836 Intron 7 28561 CEU:0.936;0.823 FUNCTIONAL_SNP rs868857 chr9 27488906 Intron 7 47491 CEU:0.938;0.879, YRI:0.882;0.778 LEAD_SNP rs3849942 chr9 27543281 Intergenic 6 ASSOCIATION 20801718 Amyotrophic lateral sclerosis 10.0457574906 IFNK - C9orf72 ASSOCIATION 19734901 Amyotrophic lateral sclerosis 8.0 IFNK - C9orf72 FUNCTIONAL_SNP rs774357 chr9 27559835 Exon,non-coding 7 16554 CEU:0.935;0.875, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3849941 chr9 27538948 Intergenic 4 4333 CEU:0.934;0.82, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2453554 chr9 27561800 Intron 5b 18519 CEU:0.935;0.875, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2453555 chr9 27563868 Intron 5b 20587 CEU:0.928;0.862, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs812858 chr9 27545467 Intergenic 5b 2186 CEU:0.935;0.875, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2814707 chr9 27536397 Intergenic 5b 6884 CEU:0.934;0.82, CHB:1.0;0.586, JPT:1.0;0.823 FUNCTIONAL_SNP rs3849943 chr9 27543382 Intergenic 6 101 CEU:0.935;0.875, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2453565 chr9 27551040 Intron 6 7759 CEU:0.935;0.875, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs700791 chr9 27545960 Intergenic 6 2679 CEU:0.921;0.848, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs774359 chr9 27561049 Exon,non-coding 5b ASSOCIATION 19734901 Amyotrophic lateral sclerosis 5.52287874528 C9orf72 FUNCTIONAL_SNP rs2453555 chr9 27563868 Intron 5b 2819 CEU:1.0;0.818, CHB:1.0;0.585, JPT:1.0;1.0, YRI:1.0;0.7 LEAD_SNP rs12555345 chr9 27630562 Intergenic 7 ASSOCIATION 21116278 Total ventricular volume 5.30102999566 C9orf72 - LINGO2 FUNCTIONAL_SNP rs12554817 chr9 27618382 Intergenic 5b 12180 CEU:1.0;0.911, CHB:0.815;0.665, JPT:0.781;0.502 FUNCTIONAL_SNP rs12552436 chr9 27633048 Intergenic 6 2486 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs12555429 chr9 27634493 Intergenic 6 3931 CEU:1.0;0.869, CHB:1.0;1.0 FUNCTIONAL_SNP rs12554757 chr9 27632832 Intergenic 6 2270 CEU:1.0;0.865 FUNCTIONAL_SNP rs13290684 chr9 27628191 Intergenic 7 2371 CEU:0.941;0.885, CHB:1.0;0.876, JPT:1.0;0.821 FUNCTIONAL_SNP rs12553837 chr9 27619407 Intergenic 7 11155 CEU:1.0;0.911, CHB:0.9;0.738, JPT:0.785;0.557 FUNCTIONAL_SNP rs1832055 chr9 27610743 Intergenic 7 19819 CEU:1.0;0.911, CHB:0.9;0.738 LEAD_SNP rs7029145 chr9 27882653 Intergenic 7 ASSOCIATION 20694011 Immunoglobulin A 5.04575749056 C9orf72 - LINGO2 FUNCTIONAL_SNP rs9918948 chr9 27874104 Intergenic 6 8549 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.953, YRI:1.0;0.88 FUNCTIONAL_SNP rs10812681 chr9 27879095 Intergenic 7 3558 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.847 FUNCTIONAL_SNP rs2795344 chr9 27875247 Intergenic 7 7406 CEU:1.0;0.959, CHB:1.0;0.951, JPT:1.0;0.905 FUNCTIONAL_SNP rs10968165 chr9 27877572 Intergenic 7 5081 CEU:1.0;0.853, CHB:1.0;0.952, JPT:1.0;0.951, YRI:1.0;1.0 FUNCTIONAL_SNP rs9918974 chr9 27876021 Intergenic 7 6632 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.736 LEAD_SNP rs10968576 chr9 28414339 Intron 7 ASSOCIATION 20935630 Body mass index 12.5228787453 LINGO2 FUNCTIONAL_SNP rs1412234 chr9 28410683 Intron 4 3656 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10968577 chr9 28415512 Intron 7 1173 CEU:1.0;1.0, JPT:1.0;0.811, YRI:1.0;0.704 FUNCTIONAL_SNP rs1412235 chr9 28410996 Intron 7 3343 CEU:1.0;0.913, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16912921 chr9 28413461 Intron 7 878 CEU:1.0;1.0, CHB:1.0;0.503, JPT:1.0;0.824 FUNCTIONAL_SNP rs2183824 chr9 28412078 Intron 7 2261 CEU:1.0;1.0, JPT:1.0;0.824 FUNCTIONAL_SNP rs2183825 chr9 28412375 Intron 7 1964 CEU:1.0;1.0, JPT:1.0;0.824 LEAD_SNP rs12336160 chr9 33283582 Intergenic 7 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 6.0 CHMP5 - NFX1 LEAD_SNP rs216345 chr9 33799370 Intron 6 ASSOCIATION 18711365 Bipolar disorder 5.39794000867 PRSS3 FUNCTIONAL_SNP rs3843935 chr9 33787871 Intron 5a 11499 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs216358 chr9 33808376 Intergenic 6 9006 CEU:0.954;0.871, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;1.0 LEAD_SNP rs7871764 chr9 34071541 Intergenic 7 ASSOCIATION 19343178 Height 5.69897000434 RNU7-36P - DCAF12 LEAD_SNP rs2812378 chr9 34710260 Intergenic 5b ASSOCIATION 18794853 Rheumatoid arthritis 7.52287874528 CCL21 LEAD_SNP rs951005 chr9 34743681 Intron 7 ASSOCIATION 20453842 Rheumatoid arthritis 9.39794000867 C9orf144B - C9orf144 FUNCTIONAL_SNP rs2812373 chr9 34741752 Intron 2b 1929 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;0.741, YRI:1.0;1.0 FUNCTIONAL_SNP rs2249561 chr9 34745069 Intron 4 1388 CEU:1.0;0.93 FUNCTIONAL_SNP rs12336168 chr9 34742364 Intron 6 1317 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs951006 chr9 34743551 Intron 6 130 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2492358 chr9 34737828 Intron 7 5853 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10972341 chr9 35141705 Intergenic 7 ASSOCIATION 19851299 Weight 5.04575749056 KIAA1539 - UNC13B FUNCTIONAL_SNP rs7046814 chr9 35142258 Intergenic 3a 553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.615 FUNCTIONAL_SNP rs10972348 chr9 35148203 Intergenic 5a 6498 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91 FUNCTIONAL_SNP rs12378159 chr9 35152115 Intergenic 6 10410 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.91 FUNCTIONAL_SNP rs4878605 chr9 35150720 Intergenic 6 9015 CEU:0.949;0.901, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7028146 chr9 35150228 Intergenic 6 8523 CEU:1.0;0.842, CHB:1.0;0.943, JPT:0.907;0.823 FUNCTIONAL_SNP rs13285401 chr9 35152858 Intergenic 6 11153 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.91 FUNCTIONAL_SNP rs4879869 chr9 35141508 Intergenic 6 197 CEU:1.0;1.0, YRI:0.859;0.705 FUNCTIONAL_SNP rs7856842 chr9 35145157 Intergenic 7 3452 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.615 FUNCTIONAL_SNP rs10972350 chr9 35149831 Intergenic 7 8126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.892;0.561 FUNCTIONAL_SNP rs4879870 chr9 35141555 Intergenic 7 150 CEU:1.0;0.882, YRI:1.0;0.641 LEAD_SNP rs7873102 chr9 38041142 Intron 7 ASSOCIATION 20171287 Brain structure 6.22184874962 SHB FUNCTIONAL_SNP rs776010 chr9 37929838 Intron 2a 111304 CEU:1.0;0.96, CHB:1.0;0.792, JPT:1.0;0.749 FUNCTIONAL_SNP rs10814648 chr9 38038431 Intron 2b 2711 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.759 FUNCTIONAL_SNP rs7850311 chr9 38060968 Intron 2b 19826 CEU:1.0;1.0, CHB:1.0;0.548, YRI:0.956;0.681 FUNCTIONAL_SNP rs7025303 chr9 38040095 Intron 4 1047 CEU:1.0;0.961, CHB:1.0;0.548 FUNCTIONAL_SNP rs776019 chr9 37939673 Intron 4 101469 CEU:1.0;0.961, CHB:1.0;0.802, JPT:1.0;0.749 FUNCTIONAL_SNP rs776020 chr9 37938387 Intron 4 102755 CEU:1.0;0.961, CHB:1.0;0.802, JPT:1.0;0.749 FUNCTIONAL_SNP rs1105773 chr9 37979220 Intron 4 61922 CEU:1.0;0.961, CHB:1.0;0.901, JPT:1.0;0.895, YRI:0.882;0.722 FUNCTIONAL_SNP rs7873094 chr9 38011047 Intron 5a 30095 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.825 FUNCTIONAL_SNP rs10758469 chr9 38030982 Intron 5a 10160 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.884;0.753 FUNCTIONAL_SNP rs7026073 chr9 38040672 Intron 5a 470 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs2149547 chr9 37990801 Intron 5b 50341 CEU:1.0;0.961, CHB:1.0;0.898, JPT:0.886;0.743, YRI:0.96;0.856 FUNCTIONAL_SNP rs943937 chr9 37983657 Intron 5b 57485 CEU:1.0;0.961, CHB:1.0;0.901, JPT:0.886;0.743, YRI:0.882;0.722 FUNCTIONAL_SNP rs776015 chr9 37942152 Intron 5b 98990 CEU:0.96;0.922, CHB:1.0;0.756, JPT:1.0;0.749 FUNCTIONAL_SNP rs4878178 chr9 38037086 Intron 5b 4056 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.89 FUNCTIONAL_SNP rs1105774 chr9 37979378 Intron 5b 61764 CEU:1.0;0.961, CHB:1.0;0.901, JPT:1.0;0.895, YRI:0.879;0.717 FUNCTIONAL_SNP rs776009 chr9 37928488 Intron 5b 112654 CEU:1.0;0.961, CHB:1.0;0.802, JPT:1.0;0.749 FUNCTIONAL_SNP rs10973646 chr9 38032374 Intron 5b 8768 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs17439717 chr9 38022953 Intron 5b 18189 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.735 FUNCTIONAL_SNP rs7042681 chr9 38040828 Intron 6 314 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs6476673 chr9 38023587 Intron 6 17555 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.923;0.82 FUNCTIONAL_SNP rs10814633 chr9 37960202 Intron 7 80940 CEU:1.0;0.961, CHB:0.94;0.794, JPT:1.0;0.749, YRI:0.882;0.722 FUNCTIONAL_SNP rs10814646 chr9 38031030 Intron 7 10112 CEU:1.0;0.961, CHB:1.0;0.56 FUNCTIONAL_SNP rs12380890 chr9 38002256 Intron 7 38886 CEU:0.959;0.92, CHB:1.0;0.9, JPT:1.0;0.895, YRI:0.947;0.518 FUNCTIONAL_SNP rs4878742 chr9 38034181 Intron 7 6961 CEU:1.0;0.961, CHB:1.0;0.548 LEAD_SNP rs4744712 chr9 71434707 Intron 6 ASSOCIATION 20383146 Chronic kidney disease 13.096910013 PIP5K1B FUNCTIONAL_SNP rs4237268 chr9 71458176 Exon,non-coding 7 23469 CEU:1.0;0.812 FUNCTIONAL_SNP rs2017 chr9 71397747 Exon,non-coding 7 36960 CEU:0.916;0.806 FUNCTIONAL_SNP rs1556751 chr9 71433212 Intron 5a 1495 CEU:1.0;0.883, JPT:0.93;0.596, YRI:1.0;1.0 FUNCTIONAL_SNP rs1889150 chr9 71443540 Intron 5a 8833 CEU:1.0;0.883, CHB:1.0;0.602, JPT:1.0;0.577 LEAD_SNP rs4745062 chr9 73784264 Intron 5b ASSOCIATION 20834067 Longevity 6.0 TRPM3 - RPL35AP21 FUNCTIONAL_SNP rs7028656 chr9 73779019 Intron 6 5245 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs11142709 chr9 73780047 Intron 6 4217 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.816 FUNCTIONAL_SNP rs10868965 chr9 73782176 Intron 6 2088 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2134862 chr9 73781682 Intron 6 2582 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1928538 chr9 73791317 Intron 6 7053 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4745063 chr9 73793882 Intron 6 9618 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs6560182 chr9 73782712 Intron 6 1552 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1411166 chr9 73781620 Intron 7 2644 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1411167 chr9 73781460 Intron 7 2804 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1329770 chr9 73782311 Intron 7 1953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1504403 chr9 73781153 Intron 7 3111 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7022924 chr9 73790256 Intron 7 5992 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7019473 chr9 73783878 Intron 7 386 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10746862 chr9 73780912 Intron 7 3352 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 LEAD_SNP rs11143230 chr9 74887703 Intergenic 6 ASSOCIATION 20877300 Suicidal ideation 6.09691001301 GDA - ZFAND5 ASSOCIATION 20877300 Suicidal ideation 5.15490195999 GDA - ZFAND5 FUNCTIONAL_SNP rs17552729 chr9 74890181 Intergenic 5b 2478 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17628566 chr9 74890801 Intergenic 6 3098 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17628494 chr9 74889167 Intergenic 7 1464 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3758354 chr9 75764565 Intergenic 2b ASSOCIATION 20713499 Schizophrenia, bipolar disorder and depression (combined) 5.52287874528 CYP1D1 - ANXA1 FUNCTIONAL_SNP rs3739956 chr9 75766838 Exon,non-coding 2b 2273 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs17058490 chr9 75734316 Intergenic 3a 30249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.905;0.75 FUNCTIONAL_SNP rs10781125 chr9 75789632 Intergenic 3a 25067 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;0.833 FUNCTIONAL_SNP rs7854415 chr9 75789730 Intergenic 5a 25165 CEU:1.0;0.848, CHB:1.0;1.0, JPT:0.853;0.637 FUNCTIONAL_SNP rs17058437 chr9 75715742 Intergenic 5b 48823 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.905;0.75 FUNCTIONAL_SNP rs7357731 chr9 75789935 Intergenic 5b 25370 CEU:1.0;0.866, CHB:1.0;0.92, JPT:1.0;0.833 FUNCTIONAL_SNP rs17058511 chr9 75752645 Intergenic 5b 11920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.905;0.749 FUNCTIONAL_SNP rs4285546 chr9 75788183 Intergenic 5b 23618 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;0.833 FUNCTIONAL_SNP rs17058426 chr9 75714313 Intergenic 5b 50252 CEU:1.0;0.866, CHB:1.0;1.0, JPT:0.905;0.75 FUNCTIONAL_SNP rs4745216 chr9 75744157 Intergenic 6 20408 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.905;0.75 FUNCTIONAL_SNP rs4745217 chr9 75744276 Intergenic 6 20289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.905;0.75 FUNCTIONAL_SNP rs17058468 chr9 75729895 Intergenic 6 34670 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.905;0.75 FUNCTIONAL_SNP rs17058508 chr9 75749645 Intergenic 6 14920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.905;0.75 FUNCTIONAL_SNP rs4745215 chr9 75743992 Intergenic 6 20573 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.905;0.75 LEAD_SNP rs11143609 chr9 76158682 Intergenic 5a ASSOCIATION 20041166 HIV-1 control 5.15490195999 ANXA1 - RORB LEAD_SNP rs11144134 chr9 77499796 Intron 5a ASSOCIATION 20700443 Serum magnesium levels 14.096910013 TRPM6 FUNCTIONAL_SNP rs12378991 chr9 77472066 Intron 5b 27730 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11144105 chr9 77442370 Intron 6 57426 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10512049 chr9 78276675 Intergenic 7 ASSOCIATION 21116278 Total ventricular volume 5.52287874528 OSTF1 - PCSK5 FUNCTIONAL_SNP rs943861 chr9 78280663 Intergenic 6 3988 CEU:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs943862 chr9 78280810 Intergenic 7 4135 CEU:1.0;1.0 FUNCTIONAL_SNP rs11144565 chr9 78282011 Intergenic 7 5336 CEU:1.0;1.0, YRI:1.0;0.792 LEAD_SNP rs12344488 chr9 78425925 Intergenic 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (AST) 5.30102999566 OSTF1 - PCSK5 FUNCTIONAL_SNP rs10217353 chr9 78426519 Intergenic 5a 594 CEU:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs10119109 chr9 78422901 Intergenic 6 3024 CEU:1.0;1.0 FUNCTIONAL_SNP rs12340030 chr9 78411895 Intergenic 7 14030 CEU:1.0;1.0, YRI:1.0;0.792 LEAD_SNP rs2842483 chr9 78906150 Intron 7 ASSOCIATION 19010793 Multiple sclerosis (age of onset) 5.30102999566 LOC100289618 FUNCTIONAL_SNP rs2842485 chr9 78905545 Intron 2c 605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs2260535 chr9 78905723 Intron 4 427 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2803417 chr9 78906132 Intron 7 18 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.873 FUNCTIONAL_SNP rs2842484 chr9 78906057 Intron 7 93 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6560517 chr9 79038170 Intron 6 ASSOCIATION 21546767 Dialysis-related mortality 5.15490195999 RPSAP9 - GCNT1 FUNCTIONAL_SNP rs11144865 chr9 78996924 Intergenic 5b 41246 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.919 FUNCTIONAL_SNP rs7861089 chr9 79041902 Intron 5b 3732 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2377639 chr9 78995253 Intergenic 6 42917 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.919 FUNCTIONAL_SNP rs11144898 chr9 79046297 Intron 7 8127 CEU:1.0;1.0, CHB:0.949;0.901, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs11144880 chr9 79025675 Intergenic 7 12495 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10781361 chr9 79045065 Intron 7 6895 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs4372070 chr9 79012658 Intergenic 7 25512 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10781380 chr9 79408144 Intron 2b ASSOCIATION 19668339 Hippocampal atrophy 6.15490195999 PRUNE2 LEAD_SNP rs2769967 chr9 81889358 Intergenic 6 ASSOCIATION 18821565 Inattentive symptoms 5.52287874528 KRT18P24 - CHCHD9 LEAD_SNP rs13292136 chr9 81952128 Intergenic 7 ASSOCIATION 20581827 Type 2 diabetes 7.52287874528 KRT18P24 - CHCHD9 FUNCTIONAL_SNP rs11138147 chr9 81940114 Intergenic 5b 12014 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs13293121 chr9 81881830 Intergenic 6 70298 CEU:1.0;0.825 FUNCTIONAL_SNP rs13292514 chr9 81924003 Intergenic 6 28125 CEU:1.0;0.88, CHB:1.0;0.603, JPT:1.0;0.512, YRI:1.0;0.613 FUNCTIONAL_SNP rs13297387 chr9 81944349 Intergenic 6 7779 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1328405 chr9 81944169 Intergenic 7 7959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4295736 chr9 81882339 Intergenic 7 69789 CEU:1.0;1.0 FUNCTIONAL_SNP rs10512085 chr9 81924713 Intergenic 7 27415 CEU:1.0;0.879, CHB:1.0;0.602, JPT:1.0;0.569, YRI:1.0;0.647 FUNCTIONAL_SNP rs17791555 chr9 81938747 Intergenic 7 13381 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2378383 chr9 82039362 Intergenic 6 ASSOCIATION 19714205 Asthma (childhood onset) 6.15490195999 CHCHD9 - TLE4 FUNCTIONAL_SNP rs1934609 chr9 82048643 Intergenic 5a 9281 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17427625 chr9 82077885 Intergenic 5a 38523 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11138198 chr9 82032097 Intergenic 7 7265 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.878, YRI:1.0;1.0 FUNCTIONAL_SNP rs10491785 chr9 82074708 Intergenic 7 35346 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2151145 chr9 82345881 Intergenic 5b ASSOCIATION 19448619 Menopause (age at onset) 7.0 TLE4 - RPS19P6 FUNCTIONAL_SNP rs2151146 chr9 82345851 Intergenic 5b 30 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4387054 chr9 82347458 Intergenic 6 1577 CEU:1.0;0.827, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4355856 chr9 82342503 Intergenic 7 3378 CEU:1.0;0.827, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4285553 chr9 82342651 Intergenic 7 3230 CEU:1.0;0.827, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs2027007 chr9 82345399 Intergenic 7 482 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12554086 chr9 82807503 Intergenic 7 ASSOCIATION 20031603 RR interval (heart rate) 6.39794000867 TLE4 - RPS19P6 FUNCTIONAL_SNP rs13298475 chr9 82790985 Intergenic 6 16518 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1329563 chr9 82798861 Intergenic 7 8642 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17176689 chr9 82780965 Intergenic 7 26538 CEU:1.0;1.0, CHB:1.0;0.586, YRI:1.0;1.0 LEAD_SNP rs10867752 chr9 84015037 Intergenic 7 ASSOCIATION 19668339 Hippocampal atrophy 5.52287874528 RPS19P6 - RPS20P25 LEAD_SNP rs668853 chr9 85311147 Intergenic 6 ASSOCIATION 19122664 Ulcerative colitis 5.69897000434 RPS2P34 - RPS6P12 FUNCTIONAL_SNP rs569518 chr9 85312272 Intergenic 6 1125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.81 FUNCTIONAL_SNP rs668906 chr9 85311115 Intergenic 7 32 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs667947 chr9 85311339 Intergenic 7 192 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 LEAD_SNP rs1998303 chr9 85414981 Intergenic 6 ASSOCIATION 17903293 Select biomarker traits 6.0 RPS6P12 - RASEF FUNCTIONAL_SNP rs1005796 chr9 85417267 Intergenic 6 2286 CEU:1.0;0.883, CHB:0.953;0.908, JPT:1.0;0.953, YRI:1.0;0.923 FUNCTIONAL_SNP rs2224518 chr9 85421619 Intergenic 7 6638 CEU:1.0;0.838, CHB:0.948;0.899, JPT:1.0;0.947, YRI:1.0;1.0 FUNCTIONAL_SNP rs10491547 chr9 85418046 Intergenic 7 3065 CEU:1.0;0.883, CHB:0.953;0.908, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs1005990 chr9 85419151 Intergenic 7 4170 CEU:1.0;0.883, CHB:0.953;0.908, JPT:1.0;0.953, YRI:1.0;0.96 FUNCTIONAL_SNP rs7853116 chr9 85415119 Intergenic 7 138 CEU:1.0;0.883, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs1040870 chr9 85415537 Intergenic 7 556 CEU:1.0;0.883, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10123041 chr9 86922036 Intron 7 ASSOCIATION 20339536 Response to statin therapy 5.22184874962 SLC28A3 FUNCTIONAL_SNP rs4877837 chr9 86917382 Intron 5a 4654 CEU:1.0;1.0, CHB:1.0;0.541, JPT:1.0;0.862, YRI:0.943;0.841 FUNCTIONAL_SNP rs7861242 chr9 86915542 Intron 5b 6494 CEU:1.0;1.0, CHB:1.0;0.541, JPT:1.0;0.861, YRI:0.943;0.841 FUNCTIONAL_SNP rs10868142 chr9 86921615 Intron 7 421 CEU:1.0;1.0, CHB:1.0;0.541, JPT:1.0;0.862, YRI:0.943;0.841 LEAD_SNP rs2841498 chr9 87930045 Intergenic 5a ASSOCIATION 20522523 Partial epilepsies 5.39794000867 NTRK2 - STK33P1 FUNCTIONAL_SNP rs2769593 chr9 87919464 Intergenic 4 10581 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.822, YRI:1.0;1.0 FUNCTIONAL_SNP rs2841496 chr9 87929600 Intergenic 6 445 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2841489 chr9 87926932 Intergenic 7 3113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2841492 chr9 87928335 Intergenic 7 1710 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2841494 chr9 87929233 Intergenic 7 812 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1806864 chr9 90031669 Intergenic 6 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.0 C9orf170 - DAPK1 FUNCTIONAL_SNP rs1930055 chr9 90001560 Intergenic 4 30109 CEU:1.0;0.855 FUNCTIONAL_SNP rs6559986 chr9 90020621 Intergenic 4 11048 CEU:1.0;1.0 FUNCTIONAL_SNP rs10512184 chr9 89993601 Intergenic 5b 38068 CEU:1.0;1.0 FUNCTIONAL_SNP rs17052797 chr9 89991700 Intergenic 5b 39969 CEU:1.0;0.855 FUNCTIONAL_SNP rs1930060 chr9 89992100 Intergenic 6 39569 CEU:1.0;0.855 FUNCTIONAL_SNP rs11791306 chr9 89966967 Intergenic 7 64702 CEU:1.0;0.918 FUNCTIONAL_SNP rs4427250 chr9 90009393 Intergenic 7 22276 CEU:1.0;1.0 FUNCTIONAL_SNP rs2889977 chr9 89994237 Intergenic 7 37432 CEU:1.0;1.0 FUNCTIONAL_SNP rs17474879 chr9 90015229 Intergenic 7 16440 CEU:1.0;1.0 LEAD_SNP rs2814828 chr9 90811182 Intergenic 7 ASSOCIATION 18391951 Height 6.04575749056 FAM75C2 - RPSAP49 LEAD_SNP rs2778031 chr9 90835726 Intergenic 6 ASSOCIATION 20881960 Height 12.0457574906 FAM75C2 - RPSAP49 FUNCTIONAL_SNP rs4877418 chr9 90836498 Intergenic 6 772 CEU:1.0;1.0, CHB:1.0;0.615, YRI:1.0;0.709 FUNCTIONAL_SNP rs10868728 chr9 90838791 Intergenic 6 3065 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.709 FUNCTIONAL_SNP rs2251622 chr9 90823606 Intergenic 7 12120 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;0.883, YRI:1.0;0.774 FUNCTIONAL_SNP rs2778026 chr9 90810514 Intergenic 7 25212 CEU:1.0;0.862, CHB:0.825;0.515, JPT:0.859;0.536 FUNCTIONAL_SNP rs2492853 chr9 90831924 Intergenic 7 3802 CEU:1.0;1.0, CHB:1.0;0.905, JPT:1.0;0.839, YRI:1.0;0.721 FUNCTIONAL_SNP rs2482488 chr9 90821421 Intergenic 7 14305 CEU:1.0;0.951, CHB:0.883;0.639, JPT:0.927;0.646 FUNCTIONAL_SNP rs2578234 chr9 90818539 Intergenic 7 17187 CEU:1.0;0.951, CHB:0.882;0.667, JPT:0.846;0.591 FUNCTIONAL_SNP rs2814828 chr9 90811182 Intergenic 7 24544 CEU:1.0;1.0, CHB:1.0;0.812, JPT:1.0;0.883 FUNCTIONAL_SNP rs1866349 chr9 90823046 Intergenic 7 12680 CEU:1.0;1.0, CHB:0.875;0.57 LEAD_SNP rs10908907 chr9 92249584 Intergenic 7 ASSOCIATION 21529783 Alcoholism (heaviness of drinking) 5.22184874962 GADD45G - IL6RL1 FUNCTIONAL_SNP rs4877118 chr9 92258048 Intergenic 3a 8464 CEU:1.0;0.908, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.727 FUNCTIONAL_SNP rs11265853 chr9 92263349 Intergenic 4 13765 CEU:1.0;0.867, CHB:1.0;0.788, JPT:1.0;0.909, YRI:0.946;0.679 FUNCTIONAL_SNP rs6559369 chr9 92258660 Intergenic 5a 9076 CEU:1.0;0.908, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.727 FUNCTIONAL_SNP rs1360200 chr9 92253118 Intergenic 5b 3534 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10908908 chr9 92255332 Intergenic 5b 5748 CEU:1.0;0.908, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.951 LEAD_SNP rs2081670 chr9 92887231 Intergenic 7 ASSOCIATION 18464913 Protein quantitative trait loci 5.52287874528 IL6RL1 - OR7E31P LEAD_SNP rs1831521 chr9 93409357 Intergenic 7 ASSOCIATION 17903297 Cognitive test performance 5.09691001301 DIRAS2 - OR7E109P FUNCTIONAL_SNP rs1412005 chr9 93409161 Intergenic 6 196 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6479614 chr9 93430175 Intergenic 6 20818 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.929 FUNCTIONAL_SNP rs7860740 chr9 93427347 Intergenic 7 17990 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.929 FUNCTIONAL_SNP rs1360471 chr9 93436857 Intergenic 7 27500 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.907, YRI:1.0;0.929 LEAD_SNP rs773506 chr9 93975471 Intergenic 7 ASSOCIATION 21150874 Diabetic nephropathy 5.22184874962 SYK - AUH LEAD_SNP rs9969804 chr9 95429120 Intron 7 ASSOCIATION 20881960 Height 16.096910013 IPPK FUNCTIONAL_SNP rs10120210 chr9 95284982 Coding 5b 144138 CEU:1.0;0.92, CHB:1.0;0.796, YRI:1.0;1.0 FUNCTIONAL_SNP rs9886781 chr9 95373251 Exon,non-coding 5b 55869 CEU:1.0;0.96, CHB:1.0;0.888, JPT:1.0;0.516, YRI:1.0;1.0 FUNCTIONAL_SNP rs2296668 chr9 95279588 Exon,non-coding 5b 149532 CEU:1.0;0.922, CHB:1.0;0.797, YRI:1.0;0.792 FUNCTIONAL_SNP rs6479424 chr9 95297077 Intron 4 132043 CEU:1.0;0.922, CHB:1.0;0.797 FUNCTIONAL_SNP rs912262 chr9 95525557 Intron 5b 96437 CEU:0.957;0.844, CHB:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs1111047 chr9 95397418 Intron 5b 31702 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1536423 chr9 95323669 Intron 5b 105451 CEU:1.0;0.922, CHB:1.0;0.797, YRI:1.0;1.0 FUNCTIONAL_SNP rs6479429 chr9 95501785 Intron 5b 72665 CEU:0.955;0.838, CHB:1.0;1.0, JPT:1.0;0.794, YRI:1.0;1.0 FUNCTIONAL_SNP rs912260 chr9 95493279 Intron 7 64159 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs6479427 chr9 95428016 Intron 7 1104 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7875225 chr9 95551720 Intergenic 7 122600 CEU:0.916;0.805 FUNCTIONAL_SNP rs7043114 chr9 95387983 Intron 7 41137 CEU:1.0;0.96, CHB:1.0;0.888, JPT:1.0;0.516 FUNCTIONAL_SNP rs10992439 chr9 95495134 Intron 7 66014 CEU:0.949;0.819, CHB:1.0;1.0, JPT:1.0;0.794, YRI:1.0;1.0 FUNCTIONAL_SNP rs2131918 chr9 95353785 Intron 7 75335 CEU:1.0;0.922, CHB:1.0;0.797, YRI:1.0;1.0 FUNCTIONAL_SNP rs10435919 chr9 95296135 Intron 7 132985 CEU:1.0;0.922, CHB:1.0;0.721, YRI:1.0;0.792 LEAD_SNP rs16910061 chr9 97314741 Intergenic 5a ASSOCIATION 19893584 Height 5.52287874528 HIATL1 - FBP2 LEAD_SNP rs3802458 chr9 97741274 Intron 7 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.39794000867 C9orf3 LEAD_SNP rs16909898 chr9 98231008 Intron 6 ASSOCIATION 20010835 Pulmonary function 6.30102999566 PTCH1 FUNCTIONAL_SNP rs1805155 chr9 98238379 Coding 7 7371 CEU:1.0;0.913, CHB:1.0;0.642, JPT:1.0;0.877, YRI:1.0;0.698 FUNCTIONAL_SNP rs28446116 chr9 98243385 Intron 2b 12377 CEU:1.0;0.913, CHB:1.0;0.642, JPT:1.0;0.877, YRI:1.0;0.745 FUNCTIONAL_SNP rs16909927 chr9 98284175 Intergenic 2b 53167 CEU:1.0;0.838 FUNCTIONAL_SNP rs16909978 chr9 98307990 Intergenic 4 76982 CEU:0.905;0.82, CHB:0.814;0.56, JPT:0.854;0.568 FUNCTIONAL_SNP rs10512249 chr9 98256309 Intron 4 25301 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.911;0.58 FUNCTIONAL_SNP rs16909856 chr9 98204493 Intergenic 5b 26515 CEU:0.905;0.82, JPT:0.854;0.568 FUNCTIONAL_SNP rs16909859 chr9 98204792 Intergenic 5b 26216 CEU:0.905;0.82, JPT:0.854;0.568 FUNCTIONAL_SNP rs2282040 chr9 98248328 Intron 5b 17320 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2282041 chr9 98248387 Intron 5b 17379 CEU:1.0;0.913, CHB:1.0;0.642, JPT:1.0;0.877, YRI:1.0;0.745 FUNCTIONAL_SNP rs2282043 chr9 98212608 Intron 5b 18400 CEU:1.0;0.907, CHB:1.0;0.846, JPT:1.0;0.877 FUNCTIONAL_SNP rs10512247 chr9 98296403 Intergenic 5b 65395 CEU:0.898;0.806, CHB:0.813;0.56, JPT:0.813;0.559 FUNCTIONAL_SNP rs16909902 chr9 98236202 Intron 6 5194 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs28535536 chr9 98226702 Intron 6 4306 CEU:1.0;0.913, CHB:1.0;0.642, JPT:1.0;0.877, YRI:1.0;0.745 FUNCTIONAL_SNP rs16909981 chr9 98313032 Intergenic 7 82024 CEU:1.0;0.827 FUNCTIONAL_SNP rs28520360 chr9 98283580 Intergenic 7 52572 CEU:1.0;0.838 FUNCTIONAL_SNP rs28469297 chr9 98280788 Intergenic 7 49780 CEU:1.0;0.838 FUNCTIONAL_SNP rs28706464 chr9 98235310 Intron 7 4302 CEU:1.0;0.913, CHB:1.0;0.642, JPT:1.0;0.877, YRI:1.0;0.698 FUNCTIONAL_SNP rs3824488 chr9 98236664 Intron 7 5656 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10512248 chr9 98259703 Intron 6 ASSOCIATION 18391952 Height 10.3979400087 PTCH1 FUNCTIONAL_SNP rs4448343 chr9 98266370 Intron 4 6667 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs28457763 chr9 98260514 Intron 7 811 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs28629854 chr9 98262833 Intron 7 3130 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs16909919 chr9 98265780 Intron 7 6077 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 LEAD_SNP rs10988802 chr9 98376699 Intergenic 6 ASSOCIATION 20237162 Plasma chemerin levels 5.39794000867 PTCH1 - PSMA7P LEAD_SNP rs11790994 chr9 98429266 Intron 5b ASSOCIATION 18821565 Inattentive symptoms 6.69897000434 PSMA7P - C9orf130 LEAD_SNP rs10816533 chr9 99539138 Intron 6 ASSOCIATION 19030899 Height 5.69897000434 ZNF510 FUNCTIONAL_SNP rs7870376 chr9 99581916 Coding 5a 42778 CEU:1.0;1.0, CHB:1.0;0.898, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs35334289 chr9 99540291 Exon,non-coding 4 1153 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs7850707 chr9 99544745 Intergenic 2b 5607 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs3758299 chr9 99542328 Intergenic 5b 3190 CEU:1.0;1.0, CHB:0.944;0.892, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs12347618 chr9 99539276 Intron 5b 138 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10120515 chr9 99547165 Intergenic 5b 8027 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs3780550 chr9 99539702 Intron 5b 564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3780551 chr9 99539739 Intron 5b 601 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs3780552 chr9 99539753 Intron 5b 615 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3780553 chr9 99539829 Intron 5b 691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12237908 chr9 99583394 Intron 6 44256 CEU:1.0;1.0, CHB:1.0;0.898, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs4538990 chr9 99549191 Intergenic 6 10053 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs10978953 chr9 99543801 Intergenic 6 4663 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs10119556 chr9 99551986 Intergenic 6 12848 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs10117921 chr9 99550434 Intergenic 6 11296 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs10118617 chr9 99550469 Intergenic 6 11331 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;0.828 FUNCTIONAL_SNP rs10115621 chr9 99551245 Intergenic 7 12107 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs10979020 chr9 99551665 Intergenic 7 12527 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs10121639 chr9 99551449 Intergenic 7 12311 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.831 LEAD_SNP rs965513 chr9 100556109 Intergenic 7 ASSOCIATION 19198613 Thyroid cancer 26.6989700043 KRT18P13 - FOXE1 FUNCTIONAL_SNP rs10759944 chr9 100556972 Intergenic 2b 863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs10983761 chr9 100553957 Intergenic 5b 2152 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs4743131 chr9 100554907 Intergenic 6 1202 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs10739496 chr9 100552559 Intergenic 7 3550 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 LEAD_SNP rs755109 chr9 100696203 Intron 6 ASSOCIATION 19197348 Quantitative traits 6.0 HEMGN FUNCTIONAL_SNP rs3808894 chr9 100686129 Intergenic 2b 10074 CEU:1.0;0.921, CHB:1.0;0.824, JPT:1.0;0.846, YRI:1.0;0.891 FUNCTIONAL_SNP rs1475696 chr9 100691397 Intron 5b 4806 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7030887 chr9 100688511 Intergenic 6 7692 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.846, YRI:1.0;1.0 FUNCTIONAL_SNP rs1475695 chr9 100691168 Intron 7 5035 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;0.846, YRI:1.0;1.0 FUNCTIONAL_SNP rs10984361 chr9 100681490 Intron 7 14713 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.846, YRI:1.0;0.891 LEAD_SNP rs4743150 chr9 100740124 Intergenic 6 ASSOCIATION 21378988 Coronary heart disease 5.30102999566 HEMGN - ANP32B FUNCTIONAL_SNP rs1059273 chr9 100849500 Exon,non-coding 5b 109376 CEU:0.896;0.803 FUNCTIONAL_SNP rs12554172 chr9 100797597 Intergenic 3a 57473 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.808 FUNCTIONAL_SNP rs3739672 chr9 100745902 Intron 4 5778 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6478539 chr9 100818720 Intergenic 4 78596 CEU:0.895;0.802, JPT:1.0;0.569 FUNCTIONAL_SNP rs4743158 chr9 100821275 Intron 4 81151 CEU:0.896;0.803, JPT:1.0;0.569 FUNCTIONAL_SNP rs7020081 chr9 100823360 Intron 5b 83236 CEU:0.896;0.803 FUNCTIONAL_SNP rs7855432 chr9 100760113 Intron 5b 19989 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs16912622 chr9 100843660 Intron 5b 103536 CEU:0.896;0.803, JPT:1.0;0.569 FUNCTIONAL_SNP rs4742716 chr9 100851420 Intron 6 111296 CEU:0.895;0.802, JPT:1.0;0.568 FUNCTIONAL_SNP rs6478556 chr9 100842005 Intron 6 101881 CEU:0.896;0.803, JPT:1.0;0.569 FUNCTIONAL_SNP rs874610 chr9 100782695 Intergenic 6 42571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs12001675 chr9 100793707 Intergenic 7 53583 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.922 FUNCTIONAL_SNP rs4742711 chr9 100780790 Intergenic 7 40666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:1.0;0.884 FUNCTIONAL_SNP rs7850685 chr9 100763890 Intron 7 23766 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs7869762 chr9 100814573 Intergenic 7 74449 CEU:0.896;0.803, JPT:1.0;0.569 FUNCTIONAL_SNP rs4743157 chr9 100809952 Intergenic 7 69828 CEU:0.896;0.803, JPT:1.0;0.569 LEAD_SNP rs10760706 chr9 102723692 Intron 6 ASSOCIATION 20596022 Alopecia areata 6.39794000867 STX17 FUNCTIONAL_SNP rs2416935 chr9 102669557 Exon,non-coding 2b 54135 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.909 FUNCTIONAL_SNP rs9556 chr9 102732237 Exon,non-coding 7 8545 CEU:1.0;0.958, CHB:0.931;0.764, JPT:1.0;0.881, YRI:0.949;0.819 FUNCTIONAL_SNP rs10121880 chr9 102685043 Intron 5a 38649 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs7039716 chr9 102670215 Intron 5b 53477 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.909 FUNCTIONAL_SNP rs10760704 chr9 102708564 Intron 6 15128 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.925, YRI:1.0;0.856 FUNCTIONAL_SNP rs10117828 chr9 102688717 Intron 6 34975 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs4743370 chr9 102681352 Intron 6 42340 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs4742777 chr9 102679173 Intron 6 44519 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs2416936 chr9 102677039 Intron 6 46653 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs1830454 chr9 102718133 Intron 6 5559 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs10121601 chr9 102687445 Intron 6 36247 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs7027619 chr9 102719728 Intron 6 3964 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs2031035 chr9 102711698 Intron 6 11994 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;0.756, YRI:1.0;0.944 FUNCTIONAL_SNP rs1852863 chr9 102712416 Intron 6 11276 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.886, YRI:1.0;0.865 FUNCTIONAL_SNP rs7038506 chr9 102710132 Intron 7 13560 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.841 FUNCTIONAL_SNP rs10116142 chr9 102727676 Intron 7 3984 CEU:0.954;0.8, CHB:0.797;0.636, JPT:1.0;0.939, YRI:0.897;0.765 FUNCTIONAL_SNP rs1997367 chr9 102713758 Intron 7 9934 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs1997368 chr9 102713580 Intron 7 10112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs4742778 chr9 102701967 Intron 7 21725 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs10217692 chr9 102710431 Intron 7 13261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs10120103 chr9 102695468 Intron 7 28224 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs4282626 chr9 102690180 Intron 7 33512 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs2416937 chr9 102680637 Intron 7 43055 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs10217337 chr9 102710396 Intron 7 13296 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.929, YRI:1.0;0.952 FUNCTIONAL_SNP rs9299335 chr9 102691446 Intron 7 32246 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs10512268 chr9 102714466 Intron 7 9226 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs4585797 chr9 102674147 Intron 7 49545 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs10760700 chr9 102681811 Intron 7 41881 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.815 FUNCTIONAL_SNP rs10123261 chr9 102695442 Intron 7 28250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs4452862 chr9 102706745 Intron 7 16947 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 LEAD_SNP rs10989661 chr9 104622868 Intergenic 7 ASSOCIATION 19247474 Smoking behavior 5.22184874962 PPP3R2 - ZYG11AP1 LEAD_SNP rs320209 chr9 104944755 Intergenic 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.39794000867 PPP3R2 - ZYG11AP1 FUNCTIONAL_SNP rs320208 chr9 104944494 Intergenic 5a 261 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0 FUNCTIONAL_SNP rs17804464 chr9 104959077 Intergenic 7 14322 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.864 LEAD_SNP rs1342899 chr9 105735195 Intergenic 7 ASSOCIATION 21659360 Response to antineoplastic agents 6.09691001301 ZYG11AP1 - CYLC2 FUNCTIONAL_SNP rs4540457 chr9 105722223 Intergenic 5b 12972 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs7030091 chr9 105647287 Intergenic 5b 87908 CEU:1.0;0.832, CHB:1.0;0.888, JPT:0.893;0.612 FUNCTIONAL_SNP rs10739854 chr9 105634264 Intergenic 6 100931 CEU:1.0;0.832, CHB:1.0;0.835, JPT:0.893;0.612 FUNCTIONAL_SNP rs1418778 chr9 105626658 Intergenic 6 108537 CEU:1.0;0.832 FUNCTIONAL_SNP rs10820316 chr9 105701445 Intergenic 6 33750 CEU:1.0;0.818, CHB:1.0;1.0, JPT:1.0;0.924 FUNCTIONAL_SNP rs10122430 chr9 105731833 Intergenic 6 3362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10820305 chr9 105672095 Intergenic 6 63100 CEU:1.0;0.832, CHB:1.0;0.943, JPT:0.893;0.612 FUNCTIONAL_SNP rs1935854 chr9 105716216 Intergenic 6 18979 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs10120943 chr9 105724864 Intergenic 6 10331 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs1935858 chr9 105703581 Intergenic 6 31614 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;0.924 FUNCTIONAL_SNP rs10121844 chr9 105680677 Intergenic 6 54518 CEU:1.0;0.832, CHB:1.0;0.943, JPT:0.893;0.612 FUNCTIONAL_SNP rs10119808 chr9 105668076 Intergenic 7 67119 CEU:1.0;0.832, CHB:1.0;0.943, JPT:0.893;0.612 FUNCTIONAL_SNP rs873091 chr9 105635187 Intergenic 7 100008 CEU:1.0;0.832, CHB:1.0;0.888, JPT:0.893;0.612 FUNCTIONAL_SNP rs7872777 chr9 105625908 Intergenic 7 109287 CEU:1.0;0.825, CHB:1.0;0.886, JPT:0.884;0.587 FUNCTIONAL_SNP rs10739855 chr9 105636552 Intergenic 7 98643 CEU:1.0;0.825, CHB:1.0;0.835, JPT:0.893;0.612 FUNCTIONAL_SNP rs10739858 chr9 105719936 Intergenic 7 15259 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs1352979 chr9 105632182 Intergenic 7 103013 CEU:1.0;0.832 FUNCTIONAL_SNP rs7046053 chr9 105699979 Intergenic 7 35216 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs7863981 chr9 105698075 Intergenic 7 37120 CEU:1.0;0.843, CHB:1.0;0.927, JPT:1.0;0.914 FUNCTIONAL_SNP rs7037875 chr9 105683337 Intergenic 7 51858 CEU:1.0;0.832, CHB:1.0;0.943, JPT:0.893;0.612 FUNCTIONAL_SNP rs10820318 chr9 105706774 Intergenic 7 28421 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;0.924 FUNCTIONAL_SNP rs10820294 chr9 105623665 Intergenic 7 111530 CEU:1.0;0.832, CHB:1.0;0.888, JPT:1.0;0.693, YRI:1.0;0.589 FUNCTIONAL_SNP rs10820303 chr9 105665534 Intergenic 7 69661 CEU:1.0;0.832, CHB:1.0;0.943, JPT:0.893;0.612 FUNCTIONAL_SNP rs10760922 chr9 105633821 Intergenic 7 101374 CEU:1.0;0.832, CHB:1.0;0.835, JPT:0.893;0.612 FUNCTIONAL_SNP rs10760924 chr9 105655809 Intergenic 7 79386 CEU:1.0;0.832, CHB:1.0;0.943, JPT:0.893;0.612 FUNCTIONAL_SNP rs10760926 chr9 105715805 Intergenic 7 19390 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7045215 chr9 105700026 Intergenic 7 35169 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;0.924 FUNCTIONAL_SNP rs10820320 chr9 105711552 Intergenic 7 23643 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;0.924 FUNCTIONAL_SNP rs2211426 chr9 105664251 Intergenic 7 70944 CEU:1.0;0.832, CHB:1.0;0.943, JPT:0.893;0.61 FUNCTIONAL_SNP rs10820324 chr9 105726335 Intergenic 7 8860 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10820325 chr9 105728181 Intergenic 7 7014 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs10990381 chr9 105685265 Intergenic 7 49930 CEU:1.0;0.832, CHB:1.0;0.943, JPT:0.804;0.544 FUNCTIONAL_SNP rs1935859 chr9 105703515 Intergenic 7 31680 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs7049087 chr9 105648104 Intergenic 7 87091 CEU:1.0;0.832, CHB:1.0;0.943, JPT:0.893;0.612 LEAD_SNP rs2515629 chr9 107594364 Intron 5b ASSOCIATION 21347282 Coronary heart disease 6.30102999566 ABCA1 LEAD_SNP rs4149268 chr9 107647220 Intron 7 ASSOCIATION 18193043 HDL cholesterol 10.0 ABCA1 FUNCTIONAL_SNP rs4149273 chr9 107642211 Intron 5a 5009 CEU:0.95;0.903, CHB:1.0;0.923, JPT:1.0;0.898, YRI:1.0;0.884 LEAD_SNP rs3890182 chr9 107647655 Intron 5b ASSOCIATION 20864672 HDL cholesterol 6.30102999566 ABCA1 ASSOCIATION 18193044 HDL cholesterol 9.52287874528 ABCA1 FUNCTIONAL_SNP rs3847302 chr9 107648595 Intron 2a 940 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs3847300 chr9 107648430 Intron 2b 775 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3847301 chr9 107648519 Intron 4 864 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.501 FUNCTIONAL_SNP rs3847303 chr9 107648652 Intron 4 997 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.501 FUNCTIONAL_SNP rs13290420 chr9 107648965 Intron 4 1310 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2417565 chr9 107648458 Intron 4 803 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.501 FUNCTIONAL_SNP rs2275543 chr9 107651174 Intron 6 3519 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs3858076 chr9 107656122 Intron 6 8467 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3905000 chr9 107657070 Intron 7 9415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.941;0.72 FUNCTIONAL_SNP rs3847305 chr9 107657253 Intron 7 9598 CEU:1.0;0.879, CHB:1.0;0.846, JPT:1.0;0.823 FUNCTIONAL_SNP rs12341993 chr9 107658910 Intron 7 11255 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7043581 chr9 107649984 Intron 7 2329 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13292582 chr9 107650430 Intron 7 2775 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2275544 chr9 107651212 Intron 7 3557 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs13283515 chr9 107645922 Intron 7 1733 CEU:1.0;0.824, CHB:1.0;0.736, JPT:1.0;1.0 LEAD_SNP rs3905000 chr9 107657070 Intron 7 ASSOCIATION 21116278 MRI atrophy measures 5.04575749056 ABCA1 ASSOCIATION 19060911 HDL cholesterol 12.0457574906 ABCA1 FUNCTIONAL_SNP rs3847302 chr9 107648595 Intron 2a 8475 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.936;0.667 FUNCTIONAL_SNP rs3847300 chr9 107648430 Intron 2b 8640 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.941;0.72 FUNCTIONAL_SNP rs3847301 chr9 107648519 Intron 4 8551 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3847303 chr9 107648652 Intron 4 8418 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13290420 chr9 107648965 Intron 4 8105 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2417565 chr9 107648458 Intron 4 8612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3890182 chr9 107647655 Intron 5b 9415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.941;0.72 FUNCTIONAL_SNP rs2275543 chr9 107651174 Intron 6 5896 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3858076 chr9 107656122 Intron 6 948 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3847305 chr9 107657253 Intron 7 183 CEU:1.0;0.879, CHB:1.0;0.846, JPT:1.0;0.823 FUNCTIONAL_SNP rs12341993 chr9 107658910 Intron 7 1840 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7043581 chr9 107649984 Intron 7 7086 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13292582 chr9 107650430 Intron 7 6640 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2275544 chr9 107651212 Intron 7 5858 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.949;0.856 FUNCTIONAL_SNP rs13283515 chr9 107645922 Intron 7 11148 CEU:1.0;0.824, CHB:1.0;0.736, JPT:1.0;1.0 LEAD_SNP rs1883025 chr9 107664301 Intron 5b ASSOCIATION 19060906 HDL cholesterol 9.0 ABCA1 LEAD_SNP rs1463984 chr9 108427062 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 5.52287874528 TAL2 - TMEM38B FUNCTIONAL_SNP rs12339326 chr9 108429615 Intergenic 7 2553 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4742971 chr9 108655096 Intergenic 7 ASSOCIATION 18464913 Protein quantitative trait loci 6.09691001301 DEPDC1P2 - ZNF462 LEAD_SNP rs7861820 chr9 108936674 Intergenic 5a ASSOCIATION 19448621 Menarche and menopause (age at onset) 8.52287874528 DEPDC1P2 - ZNF462 FUNCTIONAL_SNP rs2417687 chr9 108923457 Intergenic 7 13217 CEU:1.0;0.96, CHB:1.0;0.92, JPT:1.0;0.875 FUNCTIONAL_SNP rs1516890 chr9 108989399 Intergenic 7 52725 CEU:0.958;0.917 LEAD_SNP rs2090409 chr9 108967088 Intergenic 7 ASSOCIATION 21102462 Menarche (age at onset) 32.6989700043 DEPDC1P2 - ZNF462 ASSOCIATION 19448620 Menarche (age at onset) 8.69897000434 DEPDC1P2 - ZNF462 FUNCTIONAL_SNP rs10156597 chr9 108941509 Intergenic 2b 25579 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.734 FUNCTIONAL_SNP rs9299121 chr9 108912412 Intergenic 4 54676 CEU:1.0;0.952, CHB:0.953;0.908, JPT:1.0;1.0 FUNCTIONAL_SNP rs7862972 chr9 108981418 Intergenic 5b 14330 CEU:1.0;0.858, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.855 FUNCTIONAL_SNP rs10978431 chr9 108919024 Intergenic 5b 48064 CEU:0.947;0.811, CHB:1.0;0.954, JPT:1.0;0.951, YRI:0.92;0.846 FUNCTIONAL_SNP rs7865332 chr9 108977994 Intergenic 5b 10906 CEU:1.0;0.858, CHB:0.947;0.744, JPT:0.841;0.674 FUNCTIONAL_SNP rs7865367 chr9 108978073 Intergenic 6 10985 CEU:1.0;0.858, CHB:1.0;0.954, JPT:0.947;0.814, YRI:0.835;0.671 FUNCTIONAL_SNP rs7020666 chr9 108925446 Intergenic 6 41642 CEU:0.947;0.811, CHB:1.0;0.953, JPT:1.0;0.952, YRI:0.958;0.847 FUNCTIONAL_SNP rs13290190 chr9 108969941 Intergenic 6 2853 CEU:1.0;0.858, CHB:1.0;1.0, JPT:1.0;0.952, YRI:0.917;0.777 FUNCTIONAL_SNP rs1516887 chr9 108983067 Intergenic 6 15979 CEU:1.0;0.858, CHB:0.947;0.744, JPT:0.841;0.674 FUNCTIONAL_SNP rs10978430 chr9 108916009 Intergenic 7 51079 CEU:1.0;0.951, CHB:0.953;0.908, JPT:1.0;1.0 FUNCTIONAL_SNP rs7867013 chr9 108982542 Intergenic 7 15454 CEU:1.0;0.858, CHB:0.947;0.744, JPT:0.841;0.674 FUNCTIONAL_SNP rs13294242 chr9 108933647 Intergenic 7 33441 CEU:1.0;0.857, CHB:1.0;0.954, JPT:0.949;0.857, YRI:0.96;0.922 FUNCTIONAL_SNP rs13300395 chr9 108926464 Intergenic 7 40624 CEU:0.939;0.832, CHB:1.0;1.0, JPT:1.0;0.948, YRI:0.954;0.8 FUNCTIONAL_SNP rs7028916 chr9 108927068 Intergenic 7 40020 CEU:1.0;0.858, CHB:1.0;0.954, JPT:1.0;0.952, YRI:0.957;0.811 FUNCTIONAL_SNP rs12682937 chr9 108924249 Intergenic 7 42839 CEU:0.946;0.809, CHB:1.0;0.954, JPT:1.0;0.952, YRI:0.955;0.805 FUNCTIONAL_SNP rs12352703 chr9 108917266 Intergenic 7 49822 CEU:1.0;0.952, CHB:0.953;0.908, JPT:1.0;1.0 FUNCTIONAL_SNP rs7020240 chr9 108924941 Intergenic 7 42147 CEU:0.946;0.809, CHB:1.0;0.954, JPT:1.0;0.952, YRI:0.908;0.725 FUNCTIONAL_SNP rs10453225 chr9 108920220 Intergenic 7 46868 CEU:1.0;0.952, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.706 FUNCTIONAL_SNP rs12684029 chr9 108924139 Intergenic 7 42949 CEU:0.946;0.809, CHB:0.947;0.744, JPT:1.0;0.821 FUNCTIONAL_SNP rs12684045 chr9 108924287 Intergenic 7 42801 CEU:0.946;0.809, CHB:1.0;0.954, JPT:1.0;0.952, YRI:0.957;0.811 FUNCTIONAL_SNP rs12684048 chr9 108968220 Intergenic 7 1132 CEU:1.0;0.858, CHB:1.0;0.792, JPT:1.0;0.821 FUNCTIONAL_SNP rs11999547 chr9 108940214 Intergenic 7 26874 CEU:1.0;0.858, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.886 FUNCTIONAL_SNP rs2222133 chr9 108917072 Intergenic 7 50016 CEU:1.0;0.952, CHB:0.953;0.908, JPT:1.0;1.0 FUNCTIONAL_SNP rs2008393 chr9 108914057 Intergenic 7 53031 CEU:1.0;0.952, CHB:0.953;0.908, JPT:1.0;0.953 FUNCTIONAL_SNP rs1516881 chr9 108913054 Intergenic 7 54034 CEU:1.0;0.952, CHB:0.953;0.908, JPT:1.0;0.953 FUNCTIONAL_SNP rs1516882 chr9 108912911 Intergenic 7 54177 CEU:1.0;0.952, CHB:0.953;0.908, JPT:1.0;0.952 FUNCTIONAL_SNP rs1516883 chr9 108907267 Intergenic 7 59821 CEU:1.0;0.952, CHB:0.953;0.908, JPT:1.0;0.953 FUNCTIONAL_SNP rs12686569 chr9 108916711 Intergenic 7 50377 CEU:1.0;0.952, CHB:0.953;0.908, JPT:1.0;1.0 FUNCTIONAL_SNP rs7866767 chr9 108982379 Intergenic 7 15291 CEU:1.0;0.853, CHB:1.0;0.954, JPT:0.947;0.814, YRI:1.0;0.855 FUNCTIONAL_SNP rs4452860 chr9 108925389 Intergenic 7 41699 CEU:0.947;0.811, CHB:1.0;0.954, JPT:1.0;0.952, YRI:0.959;0.884 LEAD_SNP rs4743034 chr9 109632353 Intron 5b ASSOCIATION 18391951 Height 7.69897000434 ZNF462 LEAD_SNP rs817858 chr9 110125811 Intergenic 5b ASSOCIATION 20966902 Body mass index 5.15490195999 RAD23B - KLF4 LEAD_SNP rs7042864 chr9 110872307 Intergenic 6 ASSOCIATION 17903302 Tonometry 5.22184874962 RPL31P43 - RPL36P14 FUNCTIONAL_SNP rs7874300 chr9 110873282 Intergenic 7 975 CEU:1.0;0.96, CHB:1.0;0.887, JPT:1.0;0.863, YRI:1.0;0.94 LEAD_SNP rs865686 chr9 110888478 Intergenic 7 ASSOCIATION 21263130 Breast cancer 9.69897000434 RPL31P43 - RPL36P14 FUNCTIONAL_SNP rs471467 chr9 110888113 Intergenic 4 365 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs662694 chr9 110887996 Intergenic 4 482 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs659713 chr9 110893949 Intergenic 5a 5471 CEU:1.0;0.96, JPT:1.0;0.55 FUNCTIONAL_SNP rs630611 chr9 110925407 Intergenic 5b 36929 CEU:0.918;0.842, JPT:1.0;0.55 FUNCTIONAL_SNP rs548980 chr9 110886840 Intergenic 5b 1638 CEU:1.0;1.0, JPT:1.0;0.55 FUNCTIONAL_SNP rs520613 chr9 110886052 Intergenic 6 2426 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs525142 chr9 110886534 Intergenic 6 1944 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs676256 chr9 110895353 Intergenic 7 6875 CEU:0.953;0.869, CHB:0.74;0.547, JPT:1.0;0.648 FUNCTIONAL_SNP rs648354 chr9 110887106 Intergenic 7 1372 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs631475 chr9 110885650 Intergenic 7 2828 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs630965 chr9 110885479 Intergenic 7 2999 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.893 FUNCTIONAL_SNP rs837983 chr9 110881453 Intergenic 7 7025 CEU:1.0;0.96, JPT:1.0;0.55 FUNCTIONAL_SNP rs680138 chr9 110882980 Intergenic 7 5498 CEU:1.0;1.0, JPT:1.0;0.55 FUNCTIONAL_SNP rs837994 chr9 110926669 Intergenic 7 38191 CEU:0.918;0.842, JPT:1.0;0.55 LEAD_SNP rs523340 chr9 111854246 Intron 7 ASSOCIATION 21130836 Information processing speed 5.69897000434 C9orf5 FUNCTIONAL_SNP rs1519466 chr9 111860797 Intron 4 6551 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1996608 chr9 111857391 Intron 5a 3145 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10979696 chr9 111894029 Intergenic 5b 39783 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3750453 chr9 111801344 Intron 6 52902 CEU:1.0;0.879, CHB:1.0;1.0 FUNCTIONAL_SNP rs10759331 chr9 111914259 Intron 7 60013 CEU:1.0;0.879, CHB:1.0;0.887, JPT:1.0;1.0 FUNCTIONAL_SNP rs1533642 chr9 111903349 Intron 7 49103 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7032940 chr9 112945405 Intergenic 7 ASSOCIATION 19893584 Height 5.52287874528 AKAP2 - C9orf152 FUNCTIONAL_SNP rs7036157 chr9 112945774 Intergenic 4 369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10816934 chr9 112942820 Intergenic 5b 2585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10980249 chr9 112952774 Intron 7 7369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10816937 chr9 112951989 Intergenic 7 6584 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10816936 chr9 112951967 Intergenic 7 6562 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1327533 chr9 113131163 Intron 6 ASSOCIATION 20834067 Longevity 6.0 SVEP1 LEAD_SNP rs7042161 chr9 113197263 Intron 7 ASSOCIATION 18711365 Bipolar disorder 5.22184874962 SVEP1 FUNCTIONAL_SNP rs7043404 chr9 113201276 Intron 7 4013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10980926 chr9 114293634 Intron 7 ASSOCIATION 21102462 Menarche (age at onset) 10.3979400087 ZNF483 LEAD_SNP rs2782931 chr9 114850190 Intron 6 ASSOCIATION 17362836 Amyotrophic lateral sclerosis 5.22184874962 SUSD1 FUNCTIONAL_SNP rs13288945 chr9 114845493 Intron 7 4697 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.84 LEAD_SNP rs946053 chr9 117049891 Intron 3a ASSOCIATION 18391951 Height 6.69897000434 COL27A1 LEAD_SNP rs3810936 chr9 117552885 Coding 5b ASSOCIATION 21102463 Crohn's disease 15.0 TNFSF15 FUNCTIONAL_SNP rs4246905 chr9 117553249 Coding 7 364 CEU:1.0;0.835, JPT:1.0;0.732, YRI:1.0;0.792 FUNCTIONAL_SNP rs10114470 chr9 117547772 Intergenic 5b 5113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4246905 chr9 117553249 Coding 7 ASSOCIATION 21297633 Ulcerative colitis 11.2218487496 TNFSF15 FUNCTIONAL_SNP rs3810936 chr9 117552885 Coding 5b 364 CEU:1.0;0.835, JPT:1.0;0.732, YRI:1.0;0.792 FUNCTIONAL_SNP rs10114470 chr9 117547772 Intergenic 5b 5477 CEU:1.0;0.835, JPT:1.0;0.732, YRI:1.0;0.792 LEAD_SNP rs6478108 chr9 117558703 Intron 7 ASSOCIATION 20018961 Leprosy 20.5228787453 TNFSF15 FUNCTIONAL_SNP rs4263839 chr9 117566440 Intron 2b 7737 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs6478109 chr9 117568766 Intergenic 4 10063 CEU:1.0;0.959, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs7848647 chr9 117569046 Intergenic 5b 10343 CEU:1.0;0.959, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs10817678 chr9 117579457 Intergenic 6 20754 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs4366152 chr9 117564875 Intron 7 6172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 LEAD_SNP rs4263839 chr9 117566440 Intron 2b ASSOCIATION 18587394 Crohn's disease 9.52287874528 TNFSF15 FUNCTIONAL_SNP rs6478109 chr9 117568766 Intergenic 4 2326 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7848647 chr9 117569046 Intergenic 5b 2606 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10817678 chr9 117579457 Intergenic 6 13017 CEU:1.0;0.92, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6478108 chr9 117558703 Intron 7 7737 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs4366152 chr9 117564875 Intron 7 1565 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6478109 chr9 117568766 Intergenic 4 ASSOCIATION 18758464 Inflammatory bowel disease 7.52287874528 TNFSF15 FUNCTIONAL_SNP rs4263839 chr9 117566440 Intron 2b 2326 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7848647 chr9 117569046 Intergenic 5b 280 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10817678 chr9 117579457 Intergenic 6 10691 CEU:1.0;0.959, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6478108 chr9 117558703 Intron 7 10063 CEU:1.0;0.959, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs4366152 chr9 117564875 Intron 7 3891 CEU:1.0;0.959, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2006996 chr9 117592638 Intergenic 5b ASSOCIATION 21699788 Inflammatory bowel disease 15.3979400087 TNFSF15 - TNFSF8 ASSOCIATION 21699788 Inflammatory bowel disease 12.3979400087 TNFSF15 - TNFSF8 LEAD_SNP rs7869550 chr9 119134796 Intron 5b ASSOCIATION 18391950 Height 6.0 PAPPA LEAD_SNP rs10983238 chr9 119333683 Intron 6 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 7.0 ASTN2 LEAD_SNP rs4838255 chr9 119926426 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.52287874528 ASTN2 FUNCTIONAL_SNP rs10983562 chr9 119945170 Intron 6 18744 CEU:1.0;0.879 FUNCTIONAL_SNP rs12375453 chr9 119935780 Intron 6 9354 CEU:1.0;0.89 FUNCTIONAL_SNP rs10818005 chr9 119932867 Intron 6 6441 CEU:1.0;1.0 FUNCTIONAL_SNP rs12377326 chr9 119937217 Intron 7 10791 CEU:1.0;0.899 LEAD_SNP rs876347 chr9 121031029 Intergenic 7 ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 5.69897000434 TLR4 - DBC1 LEAD_SNP rs1572299 chr9 121346417 Intergenic 6 ASSOCIATION 19571808 Schizophrenia 5.39794000867 TLR4 - DBC1 FUNCTIONAL_SNP rs10984100 chr9 121344075 Intergenic 5b 2342 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs11789399 chr9 121359286 Intergenic 5b 12869 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10984091 chr9 121334810 Intergenic 7 11607 CEU:1.0;0.956 FUNCTIONAL_SNP rs7855145 chr9 121326409 Intergenic 7 20008 CEU:0.959;0.92 FUNCTIONAL_SNP rs11789407 chr9 121359546 Intergenic 7 13129 CEU:1.0;0.96 FUNCTIONAL_SNP rs2416660 chr9 121346040 Intergenic 7 377 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1335260 chr9 121331946 Intergenic 7 14471 CEU:1.0;0.96 LEAD_SNP rs11789399 chr9 121359286 Intergenic 5b ASSOCIATION 20889312 Bipolar disorder and schizophrenia 8.22184874962 TLR4 - DBC1 FUNCTIONAL_SNP rs10984100 chr9 121344075 Intergenic 5b 15211 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs1572299 chr9 121346417 Intergenic 6 12869 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10984091 chr9 121334810 Intergenic 7 24476 CEU:1.0;0.956 FUNCTIONAL_SNP rs7855145 chr9 121326409 Intergenic 7 32877 CEU:0.959;0.92 FUNCTIONAL_SNP rs11789407 chr9 121359546 Intergenic 7 260 CEU:1.0;0.96 FUNCTIONAL_SNP rs2416660 chr9 121346040 Intergenic 7 13246 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1335260 chr9 121331946 Intergenic 7 27340 CEU:1.0;0.96 LEAD_SNP rs10984447 chr9 121984553 Intron 7 ASSOCIATION 17660530 Multiple sclerosis 5.09691001301 DBC1 FUNCTIONAL_SNP rs1412520 chr9 121991476 Intron 6 6923 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10984443 chr9 121979181 Intron 6 5372 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1332445 chr9 121992274 Intron 7 7721 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10984446 chr9 121984307 Intron 7 246 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4837628 chr9 122059709 Intron 7 ASSOCIATION 20070850 Parkinson's disease 6.0 DBC1 FUNCTIONAL_SNP rs543961 chr9 122045399 Intron 4 14310 CEU:0.958;0.815, CHB:0.877;0.628, JPT:0.938;0.653 FUNCTIONAL_SNP rs4837632 chr9 122111773 Intron 5b 52064 CEU:1.0;0.855, CHB:0.837;0.701, JPT:0.943;0.765 FUNCTIONAL_SNP rs675878 chr9 122045229 Intron 5b 14480 CEU:0.959;0.849, CHB:1.0;0.899, JPT:1.0;0.95 FUNCTIONAL_SNP rs914647 chr9 122046193 Intron 5b 13516 CEU:1.0;0.855, CHB:1.0;0.899, JPT:1.0;0.95, YRI:0.918;0.703 FUNCTIONAL_SNP rs10984493 chr9 122098772 Intron 6 39063 CEU:0.954;0.87, CHB:0.941;0.837, JPT:1.0;0.819 FUNCTIONAL_SNP rs10115812 chr9 122081875 Intron 6 22166 CEU:0.958;0.815, CHB:1.0;0.903, JPT:1.0;0.819 FUNCTIONAL_SNP rs1886372 chr9 122075978 Intron 6 16269 CEU:1.0;0.855, CHB:0.893;0.797, JPT:1.0;0.819 FUNCTIONAL_SNP rs1408518 chr9 122077732 Intron 6 18023 CEU:1.0;0.855, CHB:0.893;0.797, JPT:1.0;0.812 FUNCTIONAL_SNP rs1886371 chr9 122075274 Intron 6 15565 CEU:1.0;0.924, CHB:0.945;0.849, JPT:1.0;0.819 FUNCTIONAL_SNP rs10760033 chr9 122069652 Intron 6 9943 CEU:0.959;0.885, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs2147435 chr9 122061584 Intron 6 1875 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.775 FUNCTIONAL_SNP rs10760034 chr9 122076635 Intron 6 16926 CEU:0.948;0.817 FUNCTIONAL_SNP rs1408516 chr9 122077552 Intron 7 17843 CEU:1.0;0.855, CHB:0.893;0.797, JPT:1.0;0.819 FUNCTIONAL_SNP rs4472587 chr9 122058146 Intron 7 1563 CEU:0.959;0.885, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1221148 chr9 122046875 Intron 7 12834 CEU:1.0;0.855, CHB:1.0;0.949, JPT:1.0;0.95, YRI:1.0;0.929 FUNCTIONAL_SNP rs7030105 chr9 122057858 Intron 7 1851 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7044898 chr9 122077166 Intron 7 17457 CEU:1.0;0.852, CHB:0.888;0.789, JPT:1.0;0.819 FUNCTIONAL_SNP rs526243 chr9 122052797 Intron 7 6912 CEU:0.959;0.885, CHB:1.0;0.899, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs1221130 chr9 122053536 Intron 7 6173 CEU:1.0;1.0, CHB:1.0;0.899, JPT:1.0;0.95, YRI:1.0;0.929 FUNCTIONAL_SNP rs10739534 chr9 122071105 Intron 7 11396 CEU:0.959;0.885, CHB:1.0;0.899, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs10818298 chr9 122073207 Intron 7 13498 CEU:0.959;0.849, CHB:0.893;0.797, JPT:1.0;0.743 FUNCTIONAL_SNP rs7862772 chr9 122059315 Intron 7 394 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10818296 chr9 122069464 Intron 7 9755 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs1359358 chr9 122073899 Intron 7 14190 CEU:1.0;0.852, CHB:0.893;0.797, JPT:1.0;0.819 LEAD_SNP rs16909449 chr9 122861297 Intergenic 6 ASSOCIATION 20339536 Response to statin therapy 6.0 DBC1 - CDK5RAP2 LEAD_SNP rs4837752 chr9 123056637 Intergenic 5b ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 5.22184874962 DBC1 - CDK5RAP2 LEAD_SNP rs1953126 chr9 123640500 Intergenic 2b ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 10.3979400087 PHF19 FUNCTIONAL_SNP rs2239657 chr9 123671520 Coding 5b 31020 CEU:1.0;0.96, CHB:1.0;0.944, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs2416806 chr9 123690292 Exon,non-coding 4 49792 CEU:1.0;1.0, CHB:1.0;0.896, JPT:1.0;0.895, YRI:1.0;0.636 FUNCTIONAL_SNP rs881375 chr9 123652898 Exon,non-coding 2b 12398 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs2241003 chr9 123666777 Exon,non-coding 7 26277 CEU:1.0;0.92, JPT:1.0;0.602 FUNCTIONAL_SNP rs7859805 chr9 123664123 Intergenic 2b 23623 CEU:1.0;0.961, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs1468671 chr9 123657502 Intergenic 2b 17002 CEU:1.0;0.96, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs1014529 chr9 123684943 Intron 4 44443 CEU:1.0;0.961, CHB:1.0;0.896, JPT:1.0;0.895, YRI:1.0;0.615 FUNCTIONAL_SNP rs7021206 chr9 123684157 Intron 4 43657 CEU:1.0;0.923, CHB:1.0;0.896, JPT:1.0;0.895, YRI:1.0;0.615 FUNCTIONAL_SNP rs6478486 chr9 123655329 Intergenic 4 14829 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs1930778 chr9 123641369 Intergenic 4 869 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;0.943 FUNCTIONAL_SNP rs2416805 chr9 123676482 Intron 4 35982 CEU:1.0;0.961, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs4837804 chr9 123705304 Intergenic 4 64804 CEU:0.954;0.833 FUNCTIONAL_SNP rs1930781 chr9 123687834 Intron 4 47334 CEU:1.0;0.961, CHB:1.0;0.896, JPT:1.0;0.895 FUNCTIONAL_SNP rs7021880 chr9 123673890 Intron 4 33390 CEU:1.0;0.918, CHB:1.0;0.943, JPT:1.0;0.895, YRI:1.0;0.626 FUNCTIONAL_SNP rs10760121 chr9 123647915 Intergenic 4 7415 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs1860824 chr9 123659339 Intergenic 4 18839 CEU:1.0;0.96, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs10435844 chr9 123668199 Intron 4 27699 CEU:1.0;0.961, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs1548783 chr9 123658639 Intergenic 4 18139 CEU:1.0;0.923, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs758959 chr9 123676699 Intron 5a 36199 CEU:1.0;0.961, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs1930780 chr9 123686219 Intron 5a 45719 CEU:1.0;0.961, CHB:1.0;0.846, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs876445 chr9 123677102 Intron 5a 36602 CEU:1.0;0.961, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs10435843 chr9 123668033 Intron 5b 27533 CEU:1.0;0.961, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs7864019 chr9 123692868 Intergenic 5b 52368 CEU:1.0;0.961, CHB:1.0;0.896, JPT:1.0;0.895, YRI:1.0;0.53 FUNCTIONAL_SNP rs2900180 chr9 123706382 Intergenic 5b 65882 CEU:1.0;0.961, CHB:1.0;0.896, JPT:1.0;0.895, YRI:1.0;0.53 FUNCTIONAL_SNP rs7039505 chr9 123705945 Intergenic 6 65445 CEU:1.0;0.953, YRI:1.0;0.503 FUNCTIONAL_SNP rs2239658 chr9 123671837 Intron 6 31337 CEU:1.0;0.961, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs7034390 chr9 123646488 Intergenic 6 5988 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs10733648 chr9 123700779 Intergenic 6 60279 CEU:1.0;0.961, CHB:1.0;0.896, JPT:1.0;0.895, YRI:1.0;0.53 FUNCTIONAL_SNP rs7046108 chr9 123660339 Intergenic 6 19839 CEU:1.0;0.961, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;0.957 FUNCTIONAL_SNP rs2270231 chr9 123650982 Intergenic 7 10482 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs2109895 chr9 123677827 Intron 7 37327 CEU:1.0;0.96, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs1609810 chr9 123642351 Intergenic 7 1851 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;0.937, YRI:1.0;1.0 FUNCTIONAL_SNP rs10739580 chr9 123695282 Intergenic 7 54782 CEU:1.0;0.961, CHB:1.0;0.896, JPT:1.0;0.895, YRI:1.0;0.53 LEAD_SNP rs881375 chr9 123652898 Exon,non-coding 2b ASSOCIATION 19503088 Rheumatoid arthritis 7.39794000867 PHF19 - TRAF1 FUNCTIONAL_SNP rs2239657 chr9 123671520 Coding 5b 18622 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7859805 chr9 123664123 Intergenic 2b 11225 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1953126 chr9 123640500 Intergenic 2b 12398 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.895, YRI:1.0;1.0 FUNCTIONAL_SNP rs1468671 chr9 123657502 Intergenic 2b 4604 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6478486 chr9 123655329 Intergenic 4 2431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2416805 chr9 123676482 Intron 4 23584 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10760121 chr9 123647915 Intergenic 4 4983 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10435844 chr9 123668199 Intron 4 15301 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1860824 chr9 123659339 Intergenic 4 6441 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1548783 chr9 123658639 Intergenic 4 5741 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs758959 chr9 123676699 Intron 5a 23801 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1930780 chr9 123686219 Intron 5a 33321 CEU:1.0;0.961, CHB:1.0;0.893, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs876445 chr9 123677102 Intron 5a 24204 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10435843 chr9 123668033 Intron 5b 15135 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2239658 chr9 123671837 Intron 6 18939 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7034390 chr9 123646488 Intergenic 6 6410 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7046108 chr9 123660339 Intergenic 6 7441 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs2270231 chr9 123650982 Intergenic 7 1916 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2109895 chr9 123677827 Intron 7 24929 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1609810 chr9 123642351 Intergenic 7 10547 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3761847 chr9 123690239 Exon,non-coding 4 ASSOCIATION 20453842 Rheumatoid arthritis 6.69897000434 TRAF1 ASSOCIATION 17804836 Rheumatoid arthritis 13.3979400087 TRAF1 FUNCTIONAL_SNP rs9886724 chr9 123665019 Exon,non-coding 4 25220 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs3761846 chr9 123689597 Exon,non-coding 4 642 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.814 FUNCTIONAL_SNP rs4836834 chr9 123665901 Exon,non-coding 5a 24338 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs11794516 chr9 123640230 Intergenic 2b 50009 CEU:1.0;0.961, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs2416804 chr9 123676396 Intron 2b 13843 CEU:1.0;0.961, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs10760129 chr9 123700183 Intergenic 2b 9944 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.952 FUNCTIONAL_SNP rs10985070 chr9 123636121 Intron 4 54118 CEU:1.0;0.961, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs7037195 chr9 123684000 Intron 4 6239 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.714 FUNCTIONAL_SNP rs10818488 chr9 123705087 Intergenic 4 14848 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.814 FUNCTIONAL_SNP rs7021049 chr9 123683982 Intron 4 6257 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs10118357 chr9 123680068 Intron 5a 10171 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs1014530 chr9 123685092 Intron 5a 5147 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.714 FUNCTIONAL_SNP rs2269060 chr9 123683569 Intron 5a 6670 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.814 FUNCTIONAL_SNP rs10818482 chr9 123648085 Intergenic 5a 42154 CEU:1.0;0.961, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;0.814 FUNCTIONAL_SNP rs10760126 chr9 123662618 Intergenic 5b 27621 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs10760130 chr9 123701990 Intergenic 5b 11751 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs10985073 chr9 123643855 Intergenic 7 46384 CEU:1.0;0.961, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs2072438 chr9 123651301 Intergenic 7 38938 CEU:1.0;0.961, CHB:1.0;0.911, JPT:1.0;1.0 LEAD_SNP rs7025486 chr9 124422403 Intron 5b ASSOCIATION 20622881 Abdominal aortic aneurysm 9.30102999566 DAB2IP FUNCTIONAL_SNP rs10985349 chr9 124425243 Intron 2b 2840 CEU:1.0;0.831, CHB:0.892;0.757, JPT:1.0;0.941 FUNCTIONAL_SNP rs10818580 chr9 124415022 Intron 2b 7381 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.941 FUNCTIONAL_SNP rs10985344 chr9 124416940 Intron 4 5463 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.939 FUNCTIONAL_SNP rs10818577 chr9 124413191 Intron 4 9212 CEU:1.0;0.912, CHB:0.948;0.898, JPT:0.938;0.829 FUNCTIONAL_SNP rs10818578 chr9 124414751 Intron 5b 7652 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.941 FUNCTIONAL_SNP rs10818579 chr9 124414905 Intron 5b 7498 CEU:1.0;0.956, CHB:1.0;0.901, JPT:1.0;0.941 FUNCTIONAL_SNP rs10818583 chr9 124422261 Intron 5b 142 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs885150 chr9 124420173 Intron 7 2230 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.941 LEAD_SNP rs7852296 chr9 126352218 Intron 4 ASSOCIATION 20691247 Personality dimensions 5.04575749056 DENND1A LEAD_SNP rs10818854 chr9 126446778 Intron 4 ASSOCIATION 21151128 Polycystic ovary syndrome 17.0457574906 DENND1A FUNCTIONAL_SNP rs10986079 chr9 126405933 Intron 5b 40845 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs10760294 chr9 126412353 Intron 5b 34425 CEU:1.0;0.848, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 LEAD_SNP rs2479106 chr9 126525212 Intron 7 ASSOCIATION 21151128 Polycystic ovary syndrome 18.096910013 DENND1A FUNCTIONAL_SNP rs1627536 chr9 126542704 Intron 6 17492 CEU:0.951;0.904, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;0.88 FUNCTIONAL_SNP rs1778900 chr9 126549420 Intron 7 24208 CEU:1.0;0.951, CHB:1.0;1.0, JPT:0.916;0.84, YRI:1.0;1.0 LEAD_SNP rs2807580 chr9 126926107 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 5.52287874528 LHX2 - NEK6 LEAD_SNP rs888219 chr9 128929023 Intergenic 7 ASSOCIATION 19721433 Response to antipsychotic treatment 6.69897000434 PBX3 - FAM125B LEAD_SNP rs867559 chr9 129465325 Intergenic 5b ASSOCIATION 20935630 Body mass index 7.0 LMX1B - ZBTB43 LEAD_SNP rs4130590 chr9 130107964 Intron 5b ASSOCIATION 18711365 Bipolar disorder 5.52287874528 GARNL3 FUNCTIONAL_SNP rs7041940 chr9 130109746 Intron 7 1782 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 LEAD_SNP rs7865146 chr9 130619637 Intergenic 5a ASSOCIATION 20694148 Metabolic syndrome 6.0 ENG - AK1 LEAD_SNP rs2502731 chr9 130976557 Intron 6 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.69897000434 DNM1 LEAD_SNP rs7866070 chr9 132444099 Intron 5b ASSOCIATION 20585627 Common traits (Other) 6.15490195999 PRRX2 FUNCTIONAL_SNP rs729524 chr9 132440784 Intron 5b 3315 CEU:1.0;0.831, CHB:0.947;0.776, JPT:1.0;0.822 FUNCTIONAL_SNP rs7029816 chr9 132441746 Intron 5b 2353 CEU:1.0;0.829, CHB:0.896;0.73, JPT:1.0;0.822, YRI:1.0;0.516 LEAD_SNP rs7466269 chr9 133464084 Intron 2b ASSOCIATION 20881960 Height 16.5228787453 FUBP3 ASSOCIATION 18391950 Height 6.09691001301 FUBP3 FUNCTIONAL_SNP rs10120359 chr9 133442655 Intergenic 5b 21429 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs7851693 chr9 133478827 Intron 6 14743 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7021911 chr9 133501018 Intron 6 36934 CEU:1.0;0.918, CHB:0.945;0.707, JPT:1.0;0.815 FUNCTIONAL_SNP rs7030440 chr9 133440620 Intergenic 7 23464 CEU:1.0;0.957, CHB:1.0;1.0, JPT:0.949;0.902, YRI:1.0;1.0 LEAD_SNP rs11243676 chr9 135096767 Intron 5b ASSOCIATION 18204098 Systemic lupus erythematosus 5.52287874528 NTNG2 LEAD_SNP rs11243897 chr9 135618283 Intron 5b ASSOCIATION 18839057 Attention deficit hyperactivity disorder 7.22184874962 C9orf98 FUNCTIONAL_SNP rs10901207 chr9 135618325 Intron 5b 42 CEU:1.0;0.921, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1076160 chr9 135776034 Intron 6 ASSOCIATION 19169254 Psoriasis 5.22184874962 TSC1 LEAD_SNP rs2905072 chr9 135845035 Intron 7 ASSOCIATION 19416921 Bipolar disorder 5.22184874962 RNU7-21P - GFI1B LEAD_SNP rs8176746 chr9 136131322 Exon,non-coding 5b ASSOCIATION 20139978 Hematological and biochemical traits 7.39794000867 ABO FUNCTIONAL_SNP rs8176743 chr9 136131415 Exon,non-coding 5b 93 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs8176749 chr9 136131188 Exon,non-coding 5b 134 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs687621 chr9 136137065 Intron 5b ASSOCIATION 21502573 D-dimer levels 5.15490195999 ABO FUNCTIONAL_SNP rs657152 chr9 136139265 Intron 5a 2200 CEU:1.0;0.913, CHB:1.0;0.906, JPT:1.0;0.778, YRI:0.96;0.796 FUNCTIONAL_SNP rs505922 chr9 136149229 Intron 5b 12164 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.778, YRI:0.951;0.596 FUNCTIONAL_SNP rs545971 chr9 136143372 Intron 5b 6307 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.786, YRI:0.926;0.725 FUNCTIONAL_SNP rs612169 chr9 136143442 Intron 5b 6377 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.778, YRI:0.918;0.702 FUNCTIONAL_SNP rs643434 chr9 136142355 Intron 5b 5290 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.786, YRI:0.926;0.725 FUNCTIONAL_SNP rs687289 chr9 136137106 Intron 5b 41 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.825, YRI:1.0;1.0 FUNCTIONAL_SNP rs529565 chr9 136149500 Intron 5b 12435 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;0.786 FUNCTIONAL_SNP rs514659 chr9 136142203 Intron 6 5138 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.821, YRI:0.926;0.725 FUNCTIONAL_SNP rs644234 chr9 136142217 Intron 6 5152 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;0.738, YRI:0.916;0.697 FUNCTIONAL_SNP rs674302 chr9 136146664 Intron 7 9599 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.786, YRI:0.926;0.725 LEAD_SNP rs657152 chr9 136139265 Intron 5a ASSOCIATION 20529992 Serum phytosterol levels 12.0457574906 ABO ASSOCIATION 18940312 Plasma levels of liver enzymes 29.6989700043 ABO FUNCTIONAL_SNP rs687621 chr9 136137065 Intron 5b 2200 CEU:1.0;0.913, CHB:1.0;0.906, JPT:1.0;0.778, YRI:0.96;0.796 FUNCTIONAL_SNP rs529565 chr9 136149500 Intron 5b 10235 CEU:1.0;0.916, CHB:1.0;0.863, JPT:0.947;0.898, YRI:0.908;0.592 FUNCTIONAL_SNP rs545971 chr9 136143372 Intron 5b 4107 CEU:1.0;0.916, CHB:1.0;0.906, JPT:0.947;0.898, YRI:0.963;0.894 FUNCTIONAL_SNP rs687289 chr9 136137106 Intron 5b 2159 CEU:1.0;0.916, CHB:1.0;0.906, JPT:1.0;0.95, YRI:0.96;0.796 FUNCTIONAL_SNP rs505922 chr9 136149229 Intron 5b 9964 CEU:1.0;0.916, CHB:1.0;0.906, JPT:0.947;0.898, YRI:1.0;0.57 FUNCTIONAL_SNP rs612169 chr9 136143442 Intron 5b 4177 CEU:1.0;0.916, CHB:1.0;0.906, JPT:0.947;0.898, YRI:0.963;0.894 FUNCTIONAL_SNP rs643434 chr9 136142355 Intron 5b 3090 CEU:1.0;1.0, CHB:1.0;0.903, JPT:0.947;0.898, YRI:0.963;0.894 FUNCTIONAL_SNP rs644234 chr9 136142217 Intron 6 2952 CEU:1.0;1.0, CHB:1.0;0.906, JPT:0.945;0.847, YRI:0.962;0.892 FUNCTIONAL_SNP rs514659 chr9 136142203 Intron 6 2938 CEU:1.0;0.915, CHB:1.0;0.906, JPT:0.947;0.896, YRI:0.963;0.894 FUNCTIONAL_SNP rs674302 chr9 136146664 Intron 7 7399 CEU:1.0;0.916, CHB:1.0;0.906, JPT:0.947;0.898, YRI:0.963;0.894 LEAD_SNP rs514659 chr9 136142203 Intron 6 ASSOCIATION 21239051 Cardiovascular disease risk factors 8.09691001301 ABO FUNCTIONAL_SNP rs657152 chr9 136139265 Intron 5a 2938 CEU:1.0;0.915, CHB:1.0;0.906, JPT:0.947;0.896, YRI:0.963;0.894 FUNCTIONAL_SNP rs505922 chr9 136149229 Intron 5b 7026 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.549 FUNCTIONAL_SNP rs545971 chr9 136143372 Intron 5b 1169 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs612169 chr9 136143442 Intron 5b 1239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs643434 chr9 136142355 Intron 5b 152 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs687289 chr9 136137106 Intron 5b 5097 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:0.926;0.725 FUNCTIONAL_SNP rs529565 chr9 136149500 Intron 5b 7297 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.689 FUNCTIONAL_SNP rs687621 chr9 136137065 Intron 5b 5138 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.821, YRI:0.926;0.725 FUNCTIONAL_SNP rs644234 chr9 136142217 Intron 6 14 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs674302 chr9 136146664 Intron 7 4461 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs505922 chr9 136149229 Intron 5b ASSOCIATION 19648918 Pancreatic cancer 7.30102999566 ABO ASSOCIATION 19278955 Venous thromboembolism 14.3979400087 ABO ASSOCIATION 18464913 Protein quantitative trait loci 39.15490196 ABO FUNCTIONAL_SNP rs657152 chr9 136139265 Intron 5a 9964 CEU:1.0;0.916, CHB:1.0;0.906, JPT:0.947;0.898, YRI:1.0;0.57 FUNCTIONAL_SNP rs545971 chr9 136143372 Intron 5b 5857 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.549 FUNCTIONAL_SNP rs612169 chr9 136143442 Intron 5b 5787 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.549 FUNCTIONAL_SNP rs643434 chr9 136142355 Intron 5b 6874 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.549 FUNCTIONAL_SNP rs687289 chr9 136137106 Intron 5b 12123 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:0.951;0.596 FUNCTIONAL_SNP rs529565 chr9 136149500 Intron 5b 271 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.793 FUNCTIONAL_SNP rs687621 chr9 136137065 Intron 5b 12164 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.778, YRI:0.951;0.596 FUNCTIONAL_SNP rs514659 chr9 136142203 Intron 6 7026 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.549 FUNCTIONAL_SNP rs644234 chr9 136142217 Intron 6 7012 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.543 FUNCTIONAL_SNP rs674302 chr9 136146664 Intron 7 2565 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.549 LEAD_SNP rs507666 chr9 136149399 Intron 5b ASSOCIATION 21533024 Soluble ICAM-1 90.5228787453 ABO ASSOCIATION 18604267 Soluble ICAM-1 28.3010299957 ABO LEAD_SNP rs651007 chr9 136153875 Intergenic 5b ASSOCIATION 20147318 Plasma E-selectin levels 81.6989700043 ABO - LCN1L2 FUNCTIONAL_SNP rs649129 chr9 136154304 Intergenic 2b 429 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs579459 chr9 136154168 Intergenic 4 293 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs495828 chr9 136154867 Intergenic 5b 992 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs635634 chr9 136155000 Intergenic 7 1125 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.647 LEAD_SNP rs579459 chr9 136154168 Intergenic 4 ASSOCIATION 21378990 Coronary heart disease 13.3979400087 ABO - LCN1L2 ASSOCIATION 20167578 Soluble levels of adhesion molecules 40.6989700043 ABO - LCN1L2 ASSOCIATION 19729612 Serum soluble E-selectin 29.0 ABO - LCN1L2 FUNCTIONAL_SNP rs649129 chr9 136154304 Intergenic 2b 136 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs495828 chr9 136154867 Intergenic 5b 699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs651007 chr9 136153875 Intergenic 5b 293 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs635634 chr9 136155000 Intergenic 7 832 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.647 LEAD_SNP rs649129 chr9 136154304 Intergenic 2b ASSOCIATION 20167578 Soluble levels of adhesion molecules 15.0 ABO - LCN1L2 FUNCTIONAL_SNP rs579459 chr9 136154168 Intergenic 4 136 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs495828 chr9 136154867 Intergenic 5b 563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs651007 chr9 136153875 Intergenic 5b 429 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs635634 chr9 136155000 Intergenic 7 696 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.648 LEAD_SNP rs495828 chr9 136154867 Intergenic 5b ASSOCIATION 20139978 Hematological and biochemical traits 11.5228787453 ABO - LCN1L2 ASSOCIATION 20139978 Hematological and biochemical traits 9.22184874962 ABO - LCN1L2 ASSOCIATION 20139978 Hematological and biochemical traits 58.3979400087 ABO - LCN1L2 ASSOCIATION 20139978 Hematological and biochemical traits 11.0 ABO - LCN1L2 ASSOCIATION 20066004 Angiotensin-converting enzyme activity 7.52287874528 ABO - LCN1L2 FUNCTIONAL_SNP rs649129 chr9 136154304 Intergenic 2b 563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs579459 chr9 136154168 Intergenic 4 699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs651007 chr9 136153875 Intergenic 5b 992 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4962153 chr9 136323754 Intron 5b ASSOCIATION 18940312 Plasma levels of liver enzymes 20.096910013 ADAMTS13;C9orf7 FUNCTIONAL_SNP rs3124765 chr9 136328657 Coding 5b 4903 CEU:1.0;0.927, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.917 FUNCTIONAL_SNP rs3094379 chr9 136334910 Exon,non-coding 4 11156 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:0.906;0.642 FUNCTIONAL_SNP rs739468 chr9 136326248 Intron 4 2494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3025343 chr9 136478355 Intergenic 5b ASSOCIATION 20418890 Smoking behavior 7.39794000867 FAM163B - DBH FUNCTIONAL_SNP rs3025360 chr9 136481205 Intergenic 5b 2850 CEU:1.0;1.0 FUNCTIONAL_SNP rs3025316 chr9 136459543 Intergenic 5b 18812 CEU:1.0;0.922 FUNCTIONAL_SNP rs739447 chr9 136477511 Intergenic 5b 844 CEU:1.0;1.0 LEAD_SNP rs3780792 chr9 136835343 Intron 5b ASSOCIATION 20598377 Multiple sclerosis 6.0 VAV2 LEAD_SNP rs7044529 chr9 137568051 Intron 5b ASSOCIATION 20719862 Central corneal thickness 7.30102999566 COL5A1 FUNCTIONAL_SNP rs12000599 chr9 137560344 Intron 4 7707 CEU:1.0;1.0, CHB:1.0;0.601, JPT:1.0;0.65, YRI:1.0;0.666 FUNCTIONAL_SNP rs12003552 chr9 137564419 Intron 6 3632 CEU:1.0;1.0, CHB:1.0;0.601 FUNCTIONAL_SNP rs6537941 chr9 137559417 Intron 6 8634 CEU:1.0;1.0, CHB:1.0;0.602, JPT:1.0;0.65, YRI:1.0;0.666 FUNCTIONAL_SNP rs6537943 chr9 137565332 Intron 7 2719 CEU:1.0;1.0, CHB:1.0;0.602, JPT:1.0;0.65, YRI:1.0;0.619 FUNCTIONAL_SNP rs6537942 chr9 137559556 Intron 7 8495 CEU:1.0;1.0, CHB:1.0;0.602, JPT:1.0;0.585, YRI:1.0;0.619 LEAD_SNP rs7874142 chr9 137704782 Intron 5b ASSOCIATION 20834067 Longevity 6.0 COL5A1 FUNCTIONAL_SNP rs4841931 chr9 137705289 Intron 5b 507 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 LEAD_SNP rs1537415 chr9 138529722 Intron 6 ASSOCIATION 19897590 Periodontitis 8.22184874962 GLT6D1 LEAD_SNP rs7849585 chr9 139111870 Intron 5b ASSOCIATION 20881960 Height 13.3010299957 QSOX2 FUNCTIONAL_SNP rs7038554 chr9 139134981 Intron 2b 23111 CEU:0.954;0.871, CHB:1.0;0.857, JPT:1.0;0.593, YRI:1.0;0.583 FUNCTIONAL_SNP rs12338076 chr9 139121740 Intron 4 9870 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.918;0.637 LEAD_SNP rs12338076 chr9 139121740 Intron 4 ASSOCIATION 20189936 Height 7.69897000434 QSOX2 LEAD_SNP rs10781499 chr9 139266405 Coding 5b ASSOCIATION 21297633 Ulcerative colitis 18.5228787453 CARD9 FUNCTIONAL_SNP rs3812570 chr9 139275204 Coding 5b 8799 CEU:0.96;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3812571 chr9 139275294 Coding 5b 8889 CEU:0.96;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.553 FUNCTIONAL_SNP rs4266763 chr9 139289825 Coding 2b 23420 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.647 FUNCTIONAL_SNP rs10781507 chr9 139272058 Coding 5b 5653 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10781510 chr9 139279173 Coding 6 12768 CEU:0.959;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.91 FUNCTIONAL_SNP rs4077515 chr9 139266496 Coding 5b 91 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1132005 chr9 139296927 Exon,non-coding 5b 30522 CEU:1.0;0.924, CHB:1.0;0.89, JPT:1.0;1.0, YRI:0.94;0.528 FUNCTIONAL_SNP rs3812560 chr9 139269905 Intergenic 4 3500 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.598 FUNCTIONAL_SNP rs3812564 chr9 139271190 Intron 4 4785 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs4498662 chr9 139290251 Intron 4 23846 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.567 FUNCTIONAL_SNP rs3829111 chr9 139269483 Intergenic 4 3078 CEU:0.913;0.834, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3812558 chr9 139269135 Intergenic 5b 2730 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3812575 chr9 139293259 Intergenic 5b 26854 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.545 FUNCTIONAL_SNP rs10781496 chr9 139261086 Intron 5b 5319 CEU:0.919;0.812, CHB:1.0;0.945, JPT:1.0;1.0 FUNCTIONAL_SNP rs10870077 chr9 139263891 Intron 5b 2514 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs10781505 chr9 139271355 Intron 5b 4950 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.667 FUNCTIONAL_SNP rs10781518 chr9 139300547 Intron 5b 34142 CEU:0.96;0.885, CHB:1.0;0.944, JPT:1.0;1.0 FUNCTIONAL_SNP rs4567159 chr9 139277059 Intron 5b 10654 CEU:0.959;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.911 FUNCTIONAL_SNP rs11794847 chr9 139271747 Intron 5b 5342 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10781500 chr9 139269338 Intergenic 6 2933 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4307445 chr9 139279776 Intron 6 13371 CEU:0.96;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.553 LEAD_SNP rs4077515 chr9 139266496 Coding 5b ASSOCIATION 21102463 Crohn's disease 36.0 CARD9 ASSOCIATION 20228799 Ulcerative colitis 7.30102999566 CARD9 FUNCTIONAL_SNP rs3812570 chr9 139275204 Coding 5b 8708 CEU:0.96;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3812571 chr9 139275294 Coding 5b 8798 CEU:0.96;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.553 FUNCTIONAL_SNP rs4266763 chr9 139289825 Coding 2b 23329 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.647 FUNCTIONAL_SNP rs10781499 chr9 139266405 Coding 5b 91 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10781507 chr9 139272058 Coding 5b 5562 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10781510 chr9 139279173 Coding 6 12677 CEU:0.959;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.91 FUNCTIONAL_SNP rs1132005 chr9 139296927 Exon,non-coding 5b 30431 CEU:1.0;0.924, CHB:1.0;0.893, JPT:1.0;1.0, YRI:0.94;0.528 FUNCTIONAL_SNP rs3812560 chr9 139269905 Intergenic 4 3409 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.598 FUNCTIONAL_SNP rs3812564 chr9 139271190 Intron 4 4694 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs4498662 chr9 139290251 Intron 4 23755 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.567 FUNCTIONAL_SNP rs3829111 chr9 139269483 Intergenic 4 2987 CEU:0.913;0.834, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4567159 chr9 139277059 Intron 5b 10563 CEU:0.959;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.911 FUNCTIONAL_SNP rs3812558 chr9 139269135 Intergenic 5b 2639 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3812575 chr9 139293259 Intergenic 5b 26763 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.545 FUNCTIONAL_SNP rs10781496 chr9 139261086 Intron 5b 5410 CEU:0.919;0.812, CHB:1.0;0.947, JPT:1.0;1.0 FUNCTIONAL_SNP rs10870077 chr9 139263891 Intron 5b 2605 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs10781505 chr9 139271355 Intron 5b 4859 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.667 FUNCTIONAL_SNP rs10781518 chr9 139300547 Intron 5b 34051 CEU:0.96;0.885, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs11794847 chr9 139271747 Intron 5b 5251 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10781500 chr9 139269338 Intergenic 6 2842 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4307445 chr9 139279776 Intron 6 13280 CEU:0.96;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.553 LEAD_SNP rs10781500 chr9 139269338 Intergenic 6 ASSOCIATION 21743469 Ankylosing spondylitis 6.0 CARD9 ASSOCIATION 19915572 Ulcerative colitis 5.15490195999 CARD9 FUNCTIONAL_SNP rs3812570 chr9 139275204 Coding 5b 5866 CEU:0.961;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3812571 chr9 139275294 Coding 5b 5956 CEU:0.961;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.553 FUNCTIONAL_SNP rs4266763 chr9 139289825 Coding 2b 20487 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.647 FUNCTIONAL_SNP rs10781499 chr9 139266405 Coding 5b 2933 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10781507 chr9 139272058 Coding 5b 2720 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10781510 chr9 139279173 Coding 6 9835 CEU:0.96;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.91 FUNCTIONAL_SNP rs4077515 chr9 139266496 Coding 5b 2842 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1132005 chr9 139296927 Exon,non-coding 5b 27589 CEU:1.0;0.961, CHB:1.0;0.893, JPT:1.0;1.0, YRI:0.94;0.528 FUNCTIONAL_SNP rs3812560 chr9 139269905 Intergenic 4 567 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.598 FUNCTIONAL_SNP rs3812564 chr9 139271190 Intron 4 1852 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs4498662 chr9 139290251 Intron 4 20913 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.567 FUNCTIONAL_SNP rs3829111 chr9 139269483 Intergenic 4 145 CEU:0.956;0.875, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4567159 chr9 139277059 Intron 5b 7721 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.911 FUNCTIONAL_SNP rs3812558 chr9 139269135 Intergenic 5b 203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3812575 chr9 139293259 Intergenic 5b 23921 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.545 FUNCTIONAL_SNP rs10870077 chr9 139263891 Intron 5b 5447 CEU:1.0;0.961, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs10781505 chr9 139271355 Intron 5b 2017 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.667 FUNCTIONAL_SNP rs10781518 chr9 139300547 Intron 5b 31209 CEU:0.961;0.923, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs11794847 chr9 139271747 Intron 5b 2409 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4307445 chr9 139279776 Intron 6 10438 CEU:0.961;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.553 LEAD_SNP rs10794720 chr10 1156165 Intron 2b ASSOCIATION 20383146 Chronic kidney disease 8.0 WDR37 FUNCTIONAL_SNP rs11250249 chr10 1116999 Intron 4 39166 CEU:1.0;1.0 FUNCTIONAL_SNP rs11250264 chr10 1151723 Intron 5b 4442 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17155886 chr10 1145182 Intron 5b 10983 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11250275 chr10 1171823 Intron 5b 15658 CEU:1.0;1.0 FUNCTIONAL_SNP rs2279256 chr10 1132852 Intron 7 23313 CEU:1.0;1.0, CHB:1.0;0.641, JPT:1.0;0.846 FUNCTIONAL_SNP rs11819230 chr10 1128812 Intron 7 27353 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs11250464 chr10 1406364 Intron 5b ASSOCIATION 20923822 Radiation response 5.22184874962 ADARB2 FUNCTIONAL_SNP rs2387653 chr10 1407826 Intron 4 1462 CEU:1.0;0.953, CHB:1.0;1.0 FUNCTIONAL_SNP rs4554799 chr10 1407728 Intron 5b 1364 CEU:1.0;0.952, CHB:1.0;1.0, YRI:1.0;0.756 LEAD_SNP rs2999399 chr10 1630821 Intron 5a ASSOCIATION 20709820 Emphysema-related traits 5.22184874962 ADARB2 FUNCTIONAL_SNP rs2813396 chr10 1634430 Intron 5b 3609 CEU:1.0;0.868, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.709 LEAD_SNP rs6560749 chr10 1676531 Intron 5b ASSOCIATION 19197348 Quantitative traits 5.09691001301 ADARB2 ASSOCIATION 19197348 Quantitative traits 5.69897000434 ADARB2 LEAD_SNP rs729397 chr10 2532019 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 5.09691001301 NCRNA00168 - PFKP LEAD_SNP rs2764980 chr10 3284007 Intron 5b ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.04575749056 PITRM1 - KLF6 FUNCTIONAL_SNP rs2814925 chr10 3284061 Intron 5b 54 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2764978 chr10 3283385 Intron 7 622 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2165468 chr10 3516105 Intergenic 7 ASSOCIATION 17903296 Bone mineral density 6.0 PITRM1 - KLF6 FUNCTIONAL_SNP rs11251909 chr10 3518557 Intergenic 4 2452 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.949;0.857, YRI:1.0;1.0 FUNCTIONAL_SNP rs11251910 chr10 3518880 Intergenic 7 2775 CEU:1.0;1.0, CHB:1.0;0.954, JPT:0.902;0.814, YRI:1.0;1.0 LEAD_SNP rs6601764 chr10 3862542 Intergenic 5b ASSOCIATION 17554300 Crohn's disease 5.04575749056 KLF6 - AKR1E2 LEAD_SNP rs2031577 chr10 4050003 Intergenic 7 ASSOCIATION 20834067 Longevity 6.0 KLF6 - AKR1E2 FUNCTIONAL_SNP rs4881271 chr10 4047125 Intergenic 6 2878 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7073584 chr10 4048528 Intergenic 7 1475 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10458787 chr10 4655565 Intergenic 6 ASSOCIATION 20397748 Body mass index 6.0 KLF6 - AKR1E2 FUNCTIONAL_SNP rs10751980 chr10 4657550 Intergenic 5a 1985 CEU:1.0;0.91, YRI:1.0;0.618 FUNCTIONAL_SNP rs7092783 chr10 4651379 Intergenic 6 4186 CEU:1.0;0.91, YRI:1.0;0.962 FUNCTIONAL_SNP rs386560 chr10 4633815 Intergenic 7 21750 CEU:1.0;0.851 FUNCTIONAL_SNP rs7071624 chr10 4655703 Intergenic 7 138 CEU:1.0;0.858, YRI:1.0;0.92 FUNCTIONAL_SNP rs7910959 chr10 4646222 Intergenic 7 9343 CEU:1.0;0.907, YRI:1.0;0.962 FUNCTIONAL_SNP rs1119654 chr10 4663168 Intergenic 7 7603 CEU:1.0;0.869, YRI:1.0;1.0 FUNCTIONAL_SNP rs1021632 chr10 4652819 Intergenic 7 2746 CEU:1.0;0.91, YRI:0.95;0.578 FUNCTIONAL_SNP rs4147277 chr10 4648964 Intergenic 7 6601 CEU:1.0;0.906, YRI:1.0;0.96 FUNCTIONAL_SNP rs1039197 chr10 4659197 Intergenic 7 3632 CEU:1.0;0.91, YRI:1.0;0.618 FUNCTIONAL_SNP rs7088381 chr10 4655831 Intergenic 7 266 CEU:1.0;0.899, YRI:1.0;0.598 LEAD_SNP rs1391511 chr10 4719796 Intron 4 ASSOCIATION 20662065 Neonatal lupus 5.15490195999 KLF6 - AKR1E2 LEAD_SNP rs2380205 chr10 5886734 Intergenic 4 ASSOCIATION 20453838 Breast cancer 6.30102999566 GDI2 - ANKRD16 FUNCTIONAL_SNP rs867052 chr10 5887183 Intergenic 2b 449 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7897260 chr10 5888427 Intergenic 2b 1693 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2203197 chr10 5904918 Intron 2b 18184 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7098372 chr10 5886149 Intergenic 4 585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7072174 chr10 5898802 Intergenic 5b 12068 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4330991 chr10 5898180 Intergenic 5b 11446 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs907689 chr10 5900973 Intergenic 5b 14239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4293038 chr10 5898159 Intergenic 5b 11425 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs907688 chr10 5900822 Intergenic 5b 14088 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs713588 chr10 5886962 Intergenic 5b 228 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7894083 chr10 5893268 Intergenic 6 6534 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9663697 chr10 5897906 Intergenic 6 11172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs907686 chr10 5900693 Intergenic 7 13959 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.731 FUNCTIONAL_SNP rs2380208 chr10 5900032 Intergenic 7 13298 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12774966 chr10 5898098 Intergenic 7 11364 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11255581 chr10 5898882 Intergenic 7 12148 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs907685 chr10 5900332 Intergenic 7 13598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7099029 chr10 5899188 Intergenic 7 12454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs706779 chr10 6098824 Intron 5a ASSOCIATION 20410501 Vitiligo 8.52287874528 IL2RA LEAD_SNP rs706778 chr10 6098949 Intron 5b ASSOCIATION 20453842 Rheumatoid arthritis 11.0 IL2RA FUNCTIONAL_SNP rs10795791 chr10 6108340 Intergenic 6 9391 CEU:1.0;0.96, CHB:1.0;0.909, JPT:0.952;0.906 FUNCTIONAL_SNP rs7073236 chr10 6106552 Intergenic 6 7603 CEU:1.0;0.959, CHB:1.0;0.906, JPT:0.952;0.906 FUNCTIONAL_SNP rs7072793 chr10 6106266 Intergenic 7 7317 CEU:1.0;0.96, CHB:1.0;0.907, JPT:0.952;0.906 LEAD_SNP rs2104286 chr10 6099045 Intron 5b ASSOCIATION 19525955 Multiple sclerosis 5.15490195999 IL2RA ASSOCIATION 19525953 Multiple sclerosis 7.04575749056 IL2RA LEAD_SNP rs3118470 chr10 6101713 Intron 7 ASSOCIATION 20596022 Alopecia areata 11.6989700043 IL2RA FUNCTIONAL_SNP rs3134883 chr10 6100725 Intron 4 988 CEU:0.949;0.857 FUNCTIONAL_SNP rs10905718 chr10 6114856 Intergenic 4 13143 CEU:0.95;0.86, YRI:1.0;0.891 FUNCTIONAL_SNP rs12412095 chr10 6113523 Intergenic 6 11810 CEU:0.95;0.86, YRI:1.0;0.891 LEAD_SNP rs12722489 chr10 6102012 Intron 7 ASSOCIATION 21102463 Crohn's disease 8.52287874528 IL2RA ASSOCIATION 17660530 Multiple sclerosis 7.52287874528 IL2RA FUNCTIONAL_SNP rs2246031 chr10 6092210 Intron 2b 9802 CEU:1.0;1.0, CHB:0.906;0.752, JPT:1.0;0.92 FUNCTIONAL_SNP rs12722527 chr10 6077328 Intron 6 24684 CEU:1.0;0.936, JPT:1.0;0.64 FUNCTIONAL_SNP rs12722561 chr10 6069893 Intron 7 32119 CEU:1.0;0.936 FUNCTIONAL_SNP rs791590 chr10 6090322 Intron 7 11690 CEU:1.0;1.0, CHB:0.906;0.752, JPT:1.0;0.92 FUNCTIONAL_SNP rs12722515 chr10 6081230 Intron 7 20782 CEU:1.0;0.933, CHB:0.779;0.549, JPT:1.0;0.92 FUNCTIONAL_SNP rs17147986 chr10 6038478 Intergenic 7 63534 CEU:0.933;0.87, CHB:0.717;0.514, JPT:0.885;0.59 FUNCTIONAL_SNP rs12722553 chr10 6071284 Intron 7 30728 CEU:0.933;0.87 LEAD_SNP rs12251307 chr10 6123495 Intergenic 6 ASSOCIATION 19430480 Type 1 diabetes 13.0 RPL32P23 - RBM17 ASSOCIATION 18978792 Type 1 diabetes 5.69897000434 RPL32P23 - RBM17 LEAD_SNP rs947474 chr10 6390450 Intergenic 4 ASSOCIATION 18978792 Type 1 diabetes 8.39794000867 DKFZp667F0711 LEAD_SNP rs4750316 chr10 6393260 Exon,non-coding 7 ASSOCIATION 20453842 Rheumatoid arthritis 5.69897000434 DKFZp667F0711 ASSOCIATION 18794853 Rheumatoid arthritis 5.39794000867 DKFZp667F0711 FUNCTIONAL_SNP rs10752291 chr10 6402679 Intergenic 5a 9419 CEU:1.0;1.0 FUNCTIONAL_SNP rs10796045 chr10 6402741 Intergenic 7 9481 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.927 FUNCTIONAL_SNP rs1570527 chr10 6404700 Intergenic 7 11440 CEU:1.0;1.0 FUNCTIONAL_SNP rs2146900 chr10 6403050 Intergenic 7 9790 CEU:1.0;1.0 FUNCTIONAL_SNP rs4558075 chr10 6401625 Intergenic 7 8365 CEU:1.0;1.0 LEAD_SNP rs11258747 chr10 6472891 Coding 6 ASSOCIATION 19430480 Type 1 diabetes 7.0 PRKCQ FUNCTIONAL_SNP rs648731 chr10 6468731 Intergenic 6 4160 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs7920162 chr10 6465660 Intergenic 6 7231 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs11258672 chr10 6462613 Intergenic 6 10278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs7082071 chr10 6470587 Intron 6 2304 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs806399 chr10 6468605 Intergenic 6 4286 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs11258708 chr10 6466438 Intergenic 7 6453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17155549 chr10 6460644 Intergenic 7 12247 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs501764 chr10 8093034 Exon,non-coding 2b ASSOCIATION 21037568 Hodgkin's lymphoma 7.15490195999 FLJ45983 FUNCTIONAL_SNP rs263423 chr10 8089033 Intergenic 4 4001 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs1244181 chr10 8091377 Intergenic 4 1657 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.849 LEAD_SNP rs10508343 chr10 8150713 Intergenic 7 ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 5.09691001301 GATA3 - KRT8P16 LEAD_SNP rs10795668 chr10 8701219 Intergenic 7 ASSOCIATION 18372905 Colorectal cancer 12.5228787453 KRT8P16 - TCEB1P3 LEAD_SNP rs62209 chr10 11000339 Intergenic 7 ASSOCIATION 21379329 Alzheimer's disease (late onset) 6.69897000434 SFTA1P - CELF2 FUNCTIONAL_SNP rs11256941 chr10 11017020 Intergenic 5b 16681 CEU:1.0;0.827, CHB:0.861;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs1295901 chr10 11009675 Intron 7 9336 CEU:1.0;1.0, CHB:0.857;0.644, JPT:1.0;0.846 FUNCTIONAL_SNP rs1928720 chr10 11014351 Intergenic 7 14012 CEU:1.0;0.826, CHB:0.861;0.74, JPT:1.0;0.846 FUNCTIONAL_SNP rs17149174 chr10 11002510 Intron 7 2171 CEU:1.0;0.883, CHB:1.0;0.864, JPT:1.0;0.846 FUNCTIONAL_SNP rs201082 chr10 11005704 Intron 7 5365 CEU:1.0;0.883, CHB:0.861;0.74, JPT:1.0;1.0 FUNCTIONAL_SNP rs201085 chr10 11011810 Intron 7 11471 CEU:1.0;0.94, CHB:0.861;0.74, JPT:1.0;0.846, YRI:1.0;0.798 FUNCTIONAL_SNP rs201086 chr10 11016076 Intergenic 7 15737 CEU:1.0;0.941, CHB:0.861;0.74, JPT:1.0;1.0 LEAD_SNP rs10906115 chr10 12314997 Intergenic 7 ASSOCIATION 20862305 Type 2 diabetes 8.0 CDC123 - CAMK1D LEAD_SNP rs12779790 chr10 12328010 Intergenic 6 ASSOCIATION 18372903 Type 2 diabetes 10.0 CDC123 - CAMK1D LEAD_SNP rs525455 chr10 13103285 Intron 6 ASSOCIATION 20526338 Platelet aggregation 6.15490195999 RPL5P25 - OPTN FUNCTIONAL_SNP rs1659837 chr10 13103112 Intron 5b 173 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1659838 chr10 13103048 Intron 5b 237 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1659839 chr10 13103022 Intron 5b 263 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs485132 chr10 13101304 Intron 6 1981 CEU:1.0;1.0, CHB:0.946;0.742, JPT:1.0;0.822, YRI:1.0;0.959 FUNCTIONAL_SNP rs483492 chr10 13101436 Intron 6 1849 CEU:1.0;1.0, CHB:1.0;0.787, JPT:1.0;0.809, YRI:1.0;0.959 FUNCTIONAL_SNP rs571066 chr10 13101622 Intron 6 1663 CEU:1.0;1.0, CHB:1.0;0.787, JPT:1.0;0.804, YRI:1.0;0.959 FUNCTIONAL_SNP rs1659843 chr10 13102315 Intron 6 970 CEU:1.0;0.952, CHB:0.936;0.826, JPT:0.826;0.682, YRI:1.0;1.0 FUNCTIONAL_SNP rs484189 chr10 13101406 Intron 6 1879 CEU:1.0;1.0, CHB:0.884;0.671, JPT:1.0;0.891, YRI:1.0;0.958 FUNCTIONAL_SNP rs1761794 chr10 13102815 Intron 7 470 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2580898 chr10 13102437 Intron 7 848 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2399914 chr10 13101585 Intron 7 1700 CEU:1.0;1.0, CHB:1.0;0.787, JPT:1.0;0.822, YRI:1.0;0.959 FUNCTIONAL_SNP rs1659842 chr10 13102332 Intron 7 953 CEU:1.0;1.0, CHB:1.0;0.776, JPT:1.0;0.802, YRI:1.0;1.0 FUNCTIONAL_SNP rs694634 chr10 13103657 Intron 7 372 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs607742 chr10 13101370 Intron 7 1915 CEU:1.0;1.0, CHB:1.0;0.787, JPT:1.0;0.904, YRI:1.0;0.959 LEAD_SNP rs1561570 chr10 13155726 Intron 4 ASSOCIATION 21623375 Paget's disease 37.3979400087 OPTN ASSOCIATION 20436471 Paget's disease 12.2218487496 OPTN FUNCTIONAL_SNP rs10752286 chr10 13160103 Intron 2a 4377 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.881;0.696 FUNCTIONAL_SNP rs10796026 chr10 13160258 Intron 5b 4532 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.881;0.696 FUNCTIONAL_SNP rs7095146 chr10 13161409 Intron 7 5683 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.868;0.601 LEAD_SNP rs1541010 chr10 13755544 Intron 2b ASSOCIATION 20031603 RR interval (heart rate) 6.0 FRMD4A LEAD_SNP rs7077361 chr10 15561543 Intron 7 ASSOCIATION 19915575 Parkinson's disease 5.30102999566 ITGA8 FUNCTIONAL_SNP rs11818881 chr10 15575030 Intron 5b 13487 CEU:1.0;1.0 FUNCTIONAL_SNP rs11819393 chr10 15575716 Intron 5b 14173 CEU:1.0;1.0 FUNCTIONAL_SNP rs7899020 chr10 15578450 Intron 5b 16907 CEU:1.0;1.0 FUNCTIONAL_SNP rs7895823 chr10 15578552 Intron 5b 17009 CEU:1.0;1.0 FUNCTIONAL_SNP rs7910674 chr10 15579020 Intron 5b 17477 CEU:1.0;1.0 FUNCTIONAL_SNP rs7910419 chr10 15578828 Intron 5b 17285 CEU:1.0;1.0 FUNCTIONAL_SNP rs4748180 chr10 15576490 Intron 5b 14947 CEU:1.0;1.0 FUNCTIONAL_SNP rs7896214 chr10 15578820 Intron 5b 17277 CEU:1.0;1.0 FUNCTIONAL_SNP rs7093271 chr10 15574531 Intron 5b 12988 CEU:1.0;1.0 FUNCTIONAL_SNP rs1376687 chr10 15579512 Intron 5b 17969 CEU:1.0;1.0 FUNCTIONAL_SNP rs1376688 chr10 15579311 Intron 5b 17768 CEU:1.0;1.0 FUNCTIONAL_SNP rs17137311 chr10 15575159 Intron 5b 13616 CEU:1.0;1.0 FUNCTIONAL_SNP rs7909694 chr10 15578270 Intron 5b 16727 CEU:1.0;1.0 FUNCTIONAL_SNP rs11813719 chr10 15575538 Intron 5b 13995 CEU:1.0;1.0 FUNCTIONAL_SNP rs17137368 chr10 15581257 Intron 5b 19714 CEU:1.0;1.0 FUNCTIONAL_SNP rs7896537 chr10 15579091 Intron 5b 17548 CEU:1.0;1.0 FUNCTIONAL_SNP rs11813625 chr10 15574890 Intron 5b 13347 CEU:1.0;1.0 FUNCTIONAL_SNP rs7093117 chr10 15574448 Intron 5b 12905 CEU:1.0;1.0 FUNCTIONAL_SNP rs4501893 chr10 15580129 Intron 6 18586 CEU:1.0;1.0 FUNCTIONAL_SNP rs9333235 chr10 15589888 Intron 6 28345 CEU:1.0;1.0 FUNCTIONAL_SNP rs17137408 chr10 15589642 Intron 7 28099 CEU:1.0;0.912 FUNCTIONAL_SNP rs4748181 chr10 15588637 Intron 7 27094 CEU:1.0;1.0 FUNCTIONAL_SNP rs1376686 chr10 15579545 Intron 7 18002 CEU:1.0;1.0 FUNCTIONAL_SNP rs7090759 chr10 15577033 Intron 7 15490 CEU:1.0;1.0 FUNCTIONAL_SNP rs7910668 chr10 15548925 Intergenic 7 12618 CEU:1.0;1.0 FUNCTIONAL_SNP rs4750671 chr10 15583365 Intron 7 21822 CEU:1.0;1.0 FUNCTIONAL_SNP rs2014821 chr10 15548747 Intergenic 7 12796 CEU:1.0;0.923 FUNCTIONAL_SNP rs9333222 chr10 15590978 Intron 7 29435 CEU:1.0;1.0 FUNCTIONAL_SNP rs7069162 chr10 15576758 Intron 7 15215 CEU:1.0;1.0 FUNCTIONAL_SNP rs6602874 chr10 15562027 Intron 7 484 CEU:1.0;0.896 FUNCTIONAL_SNP rs7072127 chr10 15573610 Intron 7 12067 CEU:1.0;1.0 LEAD_SNP rs7895372 chr10 15719621 Coding 7 ASSOCIATION 19197348 Quantitative traits 5.22184874962 ITGA8 LEAD_SNP rs10508503 chr10 16299951 Intergenic 6 ASSOCIATION 19151714 Obesity 6.69897000434 FAM188A - PTER LEAD_SNP rs1801239 chr10 16919052 Coding 5b ASSOCIATION 21355061 Urinary albumin excretion 11.0 CUBN FUNCTIONAL_SNP rs17343073 chr10 16932196 Intron 7 13144 CEU:1.0;1.0, YRI:1.0;0.66 LEAD_SNP rs10508517 chr10 16997891 Intron 7 ASSOCIATION 19197348 Quantitative traits 5.22184874962 CUBN LEAD_SNP rs11254363 chr10 17130693 Intron 4 ASSOCIATION 19303062 Folate pathway vitamin levels 6.0 CUBN LEAD_SNP rs6602175 chr10 17142526 Intron 5b ASSOCIATION 21116278 MRI atrophy measures 5.52287874528 CUBN FUNCTIONAL_SNP rs7083655 chr10 17142702 Intron 4 176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs12263745 chr10 17143310 Intron 6 784 CEU:1.0;0.839, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4748355 chr10 17150635 Intron 6 8109 CEU:1.0;0.837, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs7902920 chr10 17141533 Intron 6 993 CEU:1.0;0.955, CHB:1.0;0.84, JPT:1.0;0.945, YRI:1.0;0.957 FUNCTIONAL_SNP rs10904875 chr10 17139674 Intron 7 2852 CEU:1.0;0.957, CHB:1.0;0.849, JPT:1.0;1.0, YRI:1.0;0.886 FUNCTIONAL_SNP rs4747298 chr10 17139254 Intron 7 3272 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.886 FUNCTIONAL_SNP rs10904876 chr10 17141391 Intron 7 1135 CEU:1.0;0.957, CHB:1.0;0.849, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs11254370 chr10 17140234 Intron 7 2292 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.886 LEAD_SNP rs359312 chr10 17388143 Intron 5a ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 7.04575749056 ST8SIA6 LEAD_SNP rs17661538 chr10 18397247 Intergenic 6 ASSOCIATION 20195266 Response to antipsychotic treatment 6.0 SLC39A12 - CACNB2 FUNCTIONAL_SNP rs11012761 chr10 18415552 Intergenic 6 18305 CEU:1.0;0.866, CHB:0.891;0.719, JPT:1.0;0.545 FUNCTIONAL_SNP rs11012762 chr10 18415759 Intergenic 6 18512 CEU:1.0;0.866, CHB:0.891;0.719, JPT:1.0;0.545 FUNCTIONAL_SNP rs10764318 chr10 18415963 Intergenic 6 18716 CEU:1.0;0.866, CHB:0.891;0.717, JPT:1.0;0.545 FUNCTIONAL_SNP rs11012763 chr10 18415902 Intergenic 6 18655 CEU:1.0;0.866, CHB:0.891;0.719, JPT:1.0;0.545 FUNCTIONAL_SNP rs12769993 chr10 18397565 Intergenic 6 318 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.775 FUNCTIONAL_SNP rs16916844 chr10 18384824 Intergenic 7 12423 CEU:1.0;1.0, CHB:0.894;0.8, JPT:1.0;0.904 FUNCTIONAL_SNP rs10508557 chr10 18388277 Intergenic 7 8970 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12766253 chr10 18400425 Intergenic 7 3178 CEU:1.0;1.0 FUNCTIONAL_SNP rs12761528 chr10 18406417 Intergenic 7 9170 CEU:1.0;1.0, CHB:0.883;0.78, JPT:0.835;0.602 FUNCTIONAL_SNP rs12767511 chr10 18385184 Intergenic 7 12063 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;0.904 FUNCTIONAL_SNP rs11599314 chr10 18398954 Intergenic 7 1707 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12777104 chr10 18406393 Intergenic 7 9146 CEU:1.0;1.0, CHB:0.89;0.716, JPT:0.877;0.622 FUNCTIONAL_SNP rs10828259 chr10 18415779 Intergenic 7 18532 CEU:1.0;0.866, CHB:0.891;0.719, JPT:1.0;0.545 FUNCTIONAL_SNP rs10828260 chr10 18415841 Intergenic 7 18594 CEU:1.0;0.865, CHB:0.891;0.717, JPT:1.0;0.544 LEAD_SNP rs11014166 chr10 18708798 Intron 6 ASSOCIATION 19430479 Diastolic blood pressure 8.0 CACNB2 ASSOCIATION 19430479 Hypertension 7.22184874962 CACNB2 ASSOCIATION 19430479 Systolic blood pressure 6.15490195999 CACNB2 LEAD_SNP rs7069923 chr10 18730368 Intron 7 ASSOCIATION 19197348 Quantitative traits 6.0 CACNB2 LEAD_SNP rs7076247 chr10 18759629 Intron 6 ASSOCIATION 18464913 Protein quantitative trait loci 5.22184874962 CACNB2 FUNCTIONAL_SNP rs10764520 chr10 18758481 Intron 6 1148 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs10829156 chr10 18950555 Intron 7 ASSOCIATION 21658281 Sudden cardiac arrest 6.39794000867 ARL5B FUNCTIONAL_SNP rs7095666 chr10 18939467 Intron 3a 11088 CEU:1.0;0.879, CHB:1.0;1.0, YRI:1.0;0.639 FUNCTIONAL_SNP rs7923072 chr10 18938234 Intron 6 12321 CEU:1.0;0.879, CHB:1.0;1.0 FUNCTIONAL_SNP rs6482567 chr10 18914789 Intron 7 35766 CEU:1.0;0.87 FUNCTIONAL_SNP rs7909552 chr10 18909336 Intron 7 41219 CEU:1.0;0.879, CHB:1.0;1.0, YRI:0.947;0.596 FUNCTIONAL_SNP rs10741120 chr10 18929992 Intron 7 20563 CEU:1.0;0.879 FUNCTIONAL_SNP rs7081435 chr10 18956340 Intron 7 5785 CEU:1.0;0.879, CHB:1.0;1.0, YRI:1.0;0.664 LEAD_SNP rs1326986 chr10 19929513 Intron 5a ASSOCIATION 20062062 Ankylosing spondylitis 5.39794000867 C10orf112 FUNCTIONAL_SNP rs10508590 chr10 19927472 Intron 4 2041 CEU:1.0;1.0 FUNCTIONAL_SNP rs12776678 chr10 20019851 Intron 4 90338 CEU:1.0;1.0 FUNCTIONAL_SNP rs11010877 chr10 19930140 Intron 5a 627 CEU:1.0;1.0 FUNCTIONAL_SNP rs12774709 chr10 19868419 Intron 6 61094 CEU:1.0;1.0 FUNCTIONAL_SNP rs11010359 chr10 19851571 Intron 6 77942 CEU:1.0;1.0 FUNCTIONAL_SNP rs11010652 chr10 19888597 Intron 6 40916 CEU:1.0;1.0 FUNCTIONAL_SNP rs10827679 chr10 19914285 Intron 7 15228 CEU:1.0;1.0 FUNCTIONAL_SNP rs12359487 chr10 19831532 Intron 7 97981 CEU:1.0;1.0 FUNCTIONAL_SNP rs10827726 chr10 19928801 Intron 7 712 CEU:1.0;1.0 LEAD_SNP rs1571942 chr10 20542634 Intron 7 ASSOCIATION 21310492 Diabetic retinopathy 6.52287874528 PLXDC2 LEAD_SNP rs12219125 chr10 20593087 Intergenic 7 ASSOCIATION 21310492 Diabetic retinopathy 8.04575749056 PLXDC2 - NEBL LEAD_SNP rs12772794 chr10 20674653 Intergenic 7 ASSOCIATION 21507922 Neutrophil count 5.15490195999 PLXDC2 - NEBL LEAD_SNP rs16920624 chr10 20810525 Intergenic 7 ASSOCIATION 20360315 Response to antidepressants 6.15490195999 PLXDC2 - NEBL FUNCTIONAL_SNP rs11593835 chr10 20904153 Intergenic 4 93628 CEU:1.0;1.0, YRI:0.891;0.602 FUNCTIONAL_SNP rs7081156 chr10 20842031 Intergenic 5b 31506 CEU:1.0;1.0 FUNCTIONAL_SNP rs16920587 chr10 20806400 Intergenic 6 4125 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7910350 chr10 20808390 Intergenic 6 2135 CEU:1.0;1.0, YRI:1.0;0.759 FUNCTIONAL_SNP rs10508631 chr10 20912974 Intergenic 6 102449 CEU:1.0;1.0, YRI:0.898;0.699 FUNCTIONAL_SNP rs2359537 chr10 20907665 Intergenic 6 97140 CEU:1.0;1.0, YRI:0.946;0.65 FUNCTIONAL_SNP rs12247444 chr10 20864492 Intergenic 6 53967 CEU:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs1339654 chr10 20813456 Intergenic 7 2931 CEU:1.0;1.0 FUNCTIONAL_SNP rs11598854 chr10 20897903 Intergenic 7 87378 CEU:1.0;1.0, YRI:0.898;0.699 FUNCTIONAL_SNP rs1339653 chr10 20813062 Intergenic 7 2537 CEU:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs11819199 chr10 20865157 Intergenic 7 54632 CEU:1.0;1.0, YRI:1.0;0.642 FUNCTIONAL_SNP rs11595329 chr10 20857219 Intergenic 7 46694 CEU:1.0;1.0 FUNCTIONAL_SNP rs11598280 chr10 20897254 Intergenic 7 86729 CEU:1.0;1.0, YRI:0.894;0.691 FUNCTIONAL_SNP rs16920589 chr10 20806529 Intergenic 7 3996 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4539215 chr10 20826921 Intergenic 7 16396 CEU:1.0;1.0, YRI:1.0;0.569 FUNCTIONAL_SNP rs11594336 chr10 20880496 Intergenic 7 69971 CEU:1.0;1.0, YRI:0.901;0.679 FUNCTIONAL_SNP rs16920700 chr10 20895806 Intergenic 7 85281 CEU:1.0;1.0, YRI:0.896;0.727 FUNCTIONAL_SNP rs11598341 chr10 20897541 Intergenic 7 87016 CEU:1.0;0.848, YRI:0.896;0.666 LEAD_SNP rs2359536 chr10 20899608 Intergenic 6 ASSOCIATION 20610895 Peripheral artery disease 5.69897000434 PLXDC2 - NEBL LEAD_SNP rs1398024 chr10 23665438 Intergenic 4 ASSOCIATION 18723019 Crohn's disease and sarcoidosis (combined) 5.39794000867 C10orf67 - OTUD1 LEAD_SNP rs11013962 chr10 24495586 Intron 7 ASSOCIATION 20585627 Common traits (Other) 6.52287874528 KIAA1217 FUNCTIONAL_SNP rs12265888 chr10 24496662 Intron 4 1076 CEU:1.0;0.923, CHB:1.0;0.952, JPT:0.938;0.879, YRI:1.0;0.957 FUNCTIONAL_SNP rs7923800 chr10 24494945 Intron 4 641 CEU:1.0;1.0, CHB:1.0;0.696, JPT:1.0;0.939 FUNCTIONAL_SNP rs1543740 chr10 24529308 Intron 4 33722 CEU:0.957;0.812 FUNCTIONAL_SNP rs4748930 chr10 24502070 Intron 5b 6484 CEU:1.0;0.885 FUNCTIONAL_SNP rs3936155 chr10 24503255 Intron 5b 7669 CEU:1.0;0.887 FUNCTIONAL_SNP rs4481926 chr10 24504684 Intron 6 9098 CEU:1.0;0.887 FUNCTIONAL_SNP rs4074063 chr10 24502794 Intron 6 7208 CEU:1.0;0.887, JPT:0.791;0.524 FUNCTIONAL_SNP rs2366907 chr10 24499924 Intron 6 4338 CEU:0.958;0.848 FUNCTIONAL_SNP rs7072944 chr10 24511163 Intron 7 15577 CEU:1.0;0.887 FUNCTIONAL_SNP rs7907546 chr10 24513629 Intron 7 18043 CEU:1.0;0.887, CHB:0.772;0.54, JPT:1.0;0.663 FUNCTIONAL_SNP rs4256889 chr10 24500127 Intron 7 4541 CEU:1.0;0.887 FUNCTIONAL_SNP rs4747482 chr10 24506608 Intron 7 11022 CEU:1.0;0.887, CHB:0.727;0.503 FUNCTIONAL_SNP rs7096127 chr10 24506439 Intron 7 10853 CEU:1.0;0.884 LEAD_SNP rs2484873 chr10 24634956 Intron 7 ASSOCIATION 20125193 Cognitive test performance 6.39794000867 KIAA1217 LEAD_SNP rs927675 chr10 28382933 Intron 7 ASSOCIATION 21116278 MRI atrophy measures 5.69897000434 MPP7 FUNCTIONAL_SNP rs12776665 chr10 28400835 Intron 2b 17902 CEU:1.0;0.957, CHB:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs1886403 chr10 28372807 Intron 7 10126 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2800212 chr10 28357886 Intron 7 25047 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11007350 chr10 29289031 Intergenic 5b ASSOCIATION 21668797 Cannabis dependence 5.52287874528 RPL21P93 - LYZL1 LEAD_SNP rs1612122 chr10 29291898 Intergenic 6 ASSOCIATION 20038947 Major depressive disorder (broad) 5.15490195999 RPL21P93 - LYZL1 FUNCTIONAL_SNP rs1773860 chr10 29291556 Intergenic 5a 342 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.858 LEAD_SNP rs1927457 chr10 30008663 Intron 7 ASSOCIATION 19010793 Normalized brain volume 5.09691001301 SVIL LEAD_SNP rs2986971 chr10 30096628 Intergenic 4 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 5.52287874528 CKS1BP2 - KIAA1462 FUNCTIONAL_SNP rs3006530 chr10 30095057 Intergenic 6 1571 CEU:1.0;0.96, CHB:0.946;0.811, JPT:1.0;0.745, YRI:0.861;0.549 LEAD_SNP rs3739998 chr10 30316072 Coding 2b ASSOCIATION 21088011 Coronary heart disease 11.0 KIAA1462 FUNCTIONAL_SNP rs2478835 chr10 30317949 Coding 7 1877 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2478839 chr10 30306804 Exon,non-coding 5b 9268 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.85, YRI:1.0;0.907 FUNCTIONAL_SNP rs2487928 chr10 30323892 Intron 4 7820 CEU:1.0;0.961, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;0.641 FUNCTIONAL_SNP rs2505083 chr10 30335122 Intron 5b 19050 CEU:0.956;0.811, CHB:0.937;0.782, JPT:0.908;0.7 FUNCTIONAL_SNP rs2487927 chr10 30311366 Intron 6 4706 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2505132 chr10 30300996 Intergenic 7 15076 CEU:1.0;0.923, JPT:1.0;0.588, YRI:1.0;0.641 FUNCTIONAL_SNP rs2487926 chr10 30300787 Intergenic 7 15285 CEU:1.0;0.923, JPT:1.0;0.646, YRI:0.874;0.611 LEAD_SNP rs2505083 chr10 30335122 Intron 5b ASSOCIATION 21378988 Coronary heart disease 7.39794000867 KIAA1462 FUNCTIONAL_SNP rs2478835 chr10 30317949 Coding 7 17173 CEU:1.0;0.851, CHB:0.937;0.782, JPT:0.908;0.7 FUNCTIONAL_SNP rs3739998 chr10 30316072 Coding 2b 19050 CEU:0.956;0.811, CHB:0.937;0.782, JPT:0.908;0.7 FUNCTIONAL_SNP rs2478839 chr10 30306804 Exon,non-coding 5b 28318 CEU:0.956;0.811, CHB:0.937;0.782, JPT:0.73;0.533 FUNCTIONAL_SNP rs2487928 chr10 30323892 Intron 4 11230 CEU:1.0;0.851, CHB:0.879;0.729, JPT:0.908;0.7 FUNCTIONAL_SNP rs2487927 chr10 30311366 Intron 6 23756 CEU:0.956;0.811, CHB:0.937;0.782, JPT:0.908;0.7 LEAD_SNP rs2994684 chr10 31366271 Intergenic 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.52287874528 ZNF438 - ZEB1 FUNCTIONAL_SNP rs793086 chr10 31363143 Intergenic 4 3128 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.583 FUNCTIONAL_SNP rs793089 chr10 31365276 Intergenic 5a 995 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.679 FUNCTIONAL_SNP rs867993 chr10 31389575 Intergenic 5b 23304 CEU:1.0;0.874 FUNCTIONAL_SNP rs1771628 chr10 31368479 Intergenic 6 2208 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs867767 chr10 31414468 Intergenic 7 48197 CEU:1.0;0.93, CHB:0.819;0.67, JPT:0.8;0.64 LEAD_SNP rs7081678 chr10 31990623 Intron 5b ASSOCIATION 20935629 Waist-hip ratio 5.22184874962 GLUD1P5 - ARHGAP12 FUNCTIONAL_SNP rs11594532 chr10 31995629 Intron 5b 5006 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7085067 chr10 31990851 Intron 5b 228 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11594997 chr10 31995679 Intron 5b 5056 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11594967 chr10 31995749 Intron 5b 5126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11009175 chr10 33294775 Intron 4 ASSOCIATION 20800221 Depression--quantitative trait 5.30102999566 ITGB1 - RPL7AP53 FUNCTIONAL_SNP rs11009200 chr10 33342384 Intron 3a 47609 CEU:1.0;0.918 FUNCTIONAL_SNP rs6481818 chr10 33299356 Intron 4 4581 CEU:1.0;0.846 FUNCTIONAL_SNP rs10827173 chr10 33328779 Intron 5a 34004 CEU:1.0;0.899 FUNCTIONAL_SNP rs11009199 chr10 33342328 Intron 5a 47553 CEU:1.0;0.906 FUNCTIONAL_SNP rs10827170 chr10 33290343 Intron 6 4432 CEU:1.0;0.906 FUNCTIONAL_SNP rs7094668 chr10 33343357 Intron 7 48582 CEU:1.0;0.907 FUNCTIONAL_SNP rs11009183 chr10 33306309 Intron 7 11534 CEU:1.0;0.923 FUNCTIONAL_SNP rs10827177 chr10 33349390 Intron 7 54615 CEU:1.0;0.828 FUNCTIONAL_SNP rs7078479 chr10 33345201 Intron 7 50426 CEU:1.0;0.918 FUNCTIONAL_SNP rs10430560 chr10 33340331 Intron 7 45556 CEU:1.0;0.906 FUNCTIONAL_SNP rs12146170 chr10 33311032 Intron 7 16257 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1412115 chr10 34088053 Intergenic 5b ASSOCIATION 21682944 Schizophrenia 5.22184874962 NRP1 - RPL23P11 FUNCTIONAL_SNP rs7907733 chr10 34090939 Intergenic 2b 2886 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs7896638 chr10 34083447 Intergenic 5b 4606 CEU:1.0;1.0, CHB:1.0;0.954, JPT:0.952;0.906, YRI:1.0;0.951 FUNCTIONAL_SNP rs7921852 chr10 34094589 Intergenic 6 6536 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.897 FUNCTIONAL_SNP rs1109752 chr10 34080944 Intergenic 6 7109 CEU:1.0;1.0, CHB:0.952;0.906, JPT:1.0;0.953, YRI:1.0;0.951 FUNCTIONAL_SNP rs7909765 chr10 34079316 Intergenic 7 8737 CEU:1.0;1.0, CHB:0.953;0.908, JPT:1.0;0.952, YRI:1.0;0.951 FUNCTIONAL_SNP rs10763955 chr10 34082501 Intergenic 7 5552 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.951 FUNCTIONAL_SNP rs12415371 chr10 34082967 Intergenic 7 5086 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.951 LEAD_SNP rs7905537 chr10 34231275 Intergenic 5a ASSOCIATION 20709820 Emphysema-related traits 6.09691001301 RPL23P11 - PARD3 FUNCTIONAL_SNP rs224751 chr10 34231534 Intergenic 4 259 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11009597 chr10 34233002 Intergenic 7 1727 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs41336649 chr10 34236339 Intergenic 7 5064 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs11009599 chr10 34235573 Intergenic 7 4298 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.942;0.888, YRI:1.0;1.0 LEAD_SNP rs1780436 chr10 34257612 Intergenic 7 ASSOCIATION 21621269 Major depressive disorder 5.52287874528 RPL23P11 - PARD3 FUNCTIONAL_SNP rs1780437 chr10 34256803 Intergenic 4 809 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1705016 chr10 34257538 Intergenic 7 74 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 LEAD_SNP rs563507 chr10 34817988 Intron 5b ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 5.04575749056 PARD3 FUNCTIONAL_SNP rs773983 chr10 34779131 Intron 2a 38857 CEU:1.0;1.0 FUNCTIONAL_SNP rs1657220 chr10 34816233 Intron 2b 1755 CEU:1.0;1.0 FUNCTIONAL_SNP rs1436732 chr10 34815716 Intron 2b 2272 CEU:1.0;1.0 FUNCTIONAL_SNP rs773945 chr10 34817343 Intron 4 645 CEU:1.0;1.0 FUNCTIONAL_SNP rs1774740 chr10 34754754 Intron 5a 63234 CEU:1.0;1.0 FUNCTIONAL_SNP rs708401 chr10 34813908 Intron 5b 4080 CEU:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs773939 chr10 34744143 Intron 5b 73845 CEU:1.0;1.0 FUNCTIONAL_SNP rs773969 chr10 34813600 Intron 5b 4388 CEU:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs773995 chr10 34762908 Intron 5b 55080 CEU:1.0;1.0 FUNCTIONAL_SNP rs7921237 chr10 34688676 Intron 6 129312 CEU:1.0;1.0 FUNCTIONAL_SNP rs12267294 chr10 34701568 Intron 7 116420 CEU:1.0;1.0 FUNCTIONAL_SNP rs708399 chr10 34743403 Intron 7 74585 CEU:1.0;1.0 FUNCTIONAL_SNP rs16935346 chr10 34672050 Intron 7 145938 CEU:1.0;1.0 FUNCTIONAL_SNP rs773940 chr10 34745107 Intron 7 72881 CEU:1.0;1.0 FUNCTIONAL_SNP rs773941 chr10 34745186 Intron 7 72802 CEU:1.0;1.0 FUNCTIONAL_SNP rs1030840 chr10 34717415 Intron 7 100573 CEU:1.0;1.0 FUNCTIONAL_SNP rs4113503 chr10 34700119 Intron 7 117869 CEU:1.0;1.0 FUNCTIONAL_SNP rs1780578 chr10 34806744 Intron 7 11244 CEU:1.0;1.0 FUNCTIONAL_SNP rs773990 chr10 34786887 Intron 7 31101 CEU:1.0;1.0 FUNCTIONAL_SNP rs773994 chr10 34761186 Intron 7 56802 CEU:1.0;1.0 FUNCTIONAL_SNP rs9629909 chr10 34675789 Intron 7 142199 CEU:1.0;1.0 LEAD_SNP rs17582416 chr10 35287650 Intergenic 5b ASSOCIATION 18587394 Crohn's disease 8.69897000434 RPS12P16 - CUL2 FUNCTIONAL_SNP rs12761675 chr10 35438337 Intron 2b 150687 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs11597392 chr10 35288575 Intergenic 4 925 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.95 FUNCTIONAL_SNP rs11595898 chr10 35326263 Intron 5a 38613 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7913615 chr10 35422957 Intron 5b 135307 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs1926554 chr10 35344969 Intron 5b 57319 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7908573 chr10 35309513 Intron 7 21863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12261843 chr10 35554054 Intron 6 ASSOCIATION 21297633 Ulcerative colitis 9.15490195999 CCNY FUNCTIONAL_SNP rs12254167 chr10 35554020 Intron 7 34 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1779876 chr10 36648040 Intergenic 7 ASSOCIATION 18464913 Protein quantitative trait loci 5.52287874528 RPL7P37 - NAMPTL LEAD_SNP rs1148259 chr10 37508450 Coding 7 ASSOCIATION 19043545 Serum metabolites 8.52287874528 ANKRD30A FUNCTIONAL_SNP rs1209750 chr10 37488689 Coding 6 19761 CEU:1.0;0.957, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs1200885 chr10 37444285 Intron 6 64165 CEU:1.0;0.957, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.817 LEAD_SNP rs1200821 chr10 37559580 Intergenic 6 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.22184874962 ANKRD30A - MTRNR2L7 FUNCTIONAL_SNP rs1200817 chr10 37558907 Intergenic 7 673 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.927, YRI:1.0;0.807 LEAD_SNP rs7474896 chr10 37982097 Intergenic 7 ASSOCIATION 19553259 Obesity (extreme) 6.04575749056 MTRNR2L7 - TLK2P2 FUNCTIONAL_SNP rs10827832 chr10 38119941 Exon,non-coding 6 137844 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0 FUNCTIONAL_SNP rs12782327 chr10 38092443 Exon,non-coding 2b 110346 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0 FUNCTIONAL_SNP rs11595684 chr10 38083804 Intergenic 3a 101707 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12571820 chr10 38009354 Intergenic 5a 27257 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2891586 chr10 38101643 Intron 5a 119546 CEU:1.0;1.0, CHB:1.0;0.778, JPT:1.0;1.0 FUNCTIONAL_SNP rs9417268 chr10 38133194 Intron 5b 151097 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0 FUNCTIONAL_SNP rs12778627 chr10 37935402 Intergenic 5b 46695 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2076809 chr10 37992967 Intergenic 5b 10870 CEU:1.0;0.913, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs12360411 chr10 38046634 Intergenic 5b 64537 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11011326 chr10 37966191 Intergenic 5b 15906 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11011330 chr10 37968842 Intergenic 5b 13255 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11011331 chr10 37968938 Intergenic 5b 13159 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11011334 chr10 37973151 Intergenic 5b 8946 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11011366 chr10 38074158 Intergenic 5b 92061 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12357418 chr10 37993860 Intergenic 5b 11763 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs734512 chr10 37973072 Intergenic 5b 9025 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10764141 chr10 37941254 Intergenic 5b 40843 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12772239 chr10 37988944 Intergenic 5b 6847 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3824585 chr10 38109421 Intron 5b 127324 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0 FUNCTIONAL_SNP rs9418299 chr10 38140227 Intron 6 158130 CEU:1.0;1.0, CHB:1.0;0.778, JPT:1.0;1.0 FUNCTIONAL_SNP rs11492508 chr10 38098136 Intron 6 116039 CEU:1.0;1.0 FUNCTIONAL_SNP rs11011328 chr10 37966347 Intergenic 6 15750 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12358094 chr10 38015506 Intergenic 6 33409 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11597286 chr10 38106455 Intron 6 124358 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0 FUNCTIONAL_SNP rs10827809 chr10 37931812 Intergenic 7 50285 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10827814 chr10 37964390 Intergenic 7 17707 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2738219 chr10 38158260 Intergenic 7 176163 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0 FUNCTIONAL_SNP rs10827823 chr10 38039381 Intergenic 7 57284 CEU:1.0;0.846, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs10827824 chr10 38047039 Intergenic 7 64942 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;0.896, YRI:1.0;1.0 FUNCTIONAL_SNP rs12783666 chr10 38017088 Intergenic 7 34991 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9417267 chr10 38130345 Intron 7 148248 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0 FUNCTIONAL_SNP rs10827831 chr10 38110813 Intron 7 128716 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0 FUNCTIONAL_SNP rs12783722 chr10 38025084 Intergenic 7 42987 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs11011294 chr10 37921070 Intergenic 7 61027 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11011310 chr10 37941911 Intergenic 7 40186 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs11011315 chr10 37950093 Intergenic 7 32004 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11011317 chr10 37955789 Intergenic 7 26308 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11011318 chr10 37956556 Intergenic 7 25541 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs11011321 chr10 37962378 Intergenic 7 19719 CEU:1.0;1.0, CHB:1.0;0.896, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11011322 chr10 37964129 Intergenic 7 17968 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11523837 chr10 38100438 Intron 7 118341 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0 FUNCTIONAL_SNP rs11011344 chr10 38004846 Intergenic 7 22749 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12763409 chr10 38092690 Intron 7 110593 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11011354 chr10 38047883 Intergenic 7 65786 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs11011355 chr10 38048185 Intergenic 7 66088 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2753879 chr10 38172935 Intergenic 7 190838 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0 FUNCTIONAL_SNP rs12359608 chr10 38078196 Intergenic 7 96099 CEU:1.0;1.0, CHB:1.0;0.797, JPT:1.0;1.0 FUNCTIONAL_SNP rs12570108 chr10 37956003 Intergenic 7 26094 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 LEAD_SNP rs2142991 chr10 43341105 Intergenic 6 ASSOCIATION 21685912 Progressive supranuclear palsy 6.52287874528 BMS1 - RET FUNCTIONAL_SNP rs3121279 chr10 43378449 Intergenic 2b 37344 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs2796549 chr10 43366037 Intergenic 5b 24932 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.875, YRI:1.0;1.0 FUNCTIONAL_SNP rs3121323 chr10 43377166 Intergenic 5b 36061 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs3121327 chr10 43388285 Intergenic 5b 47180 CEU:1.0;0.847, CHB:1.0;0.642, JPT:1.0;0.526 FUNCTIONAL_SNP rs947549 chr10 43265880 Intergenic 5b 75225 CEU:1.0;1.0, CHB:0.874;0.764, JPT:1.0;0.92 FUNCTIONAL_SNP rs2744060 chr10 43262616 Intergenic 5b 78489 CEU:1.0;1.0, CHB:0.874;0.764, JPT:1.0;0.92 FUNCTIONAL_SNP rs3121278 chr10 43375646 Intergenic 5b 34541 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs2795527 chr10 43270240 Intergenic 6 70865 CEU:1.0;1.0, CHB:0.86;0.74, JPT:1.0;0.719 FUNCTIONAL_SNP rs2744085 chr10 43341976 Intergenic 6 871 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1815716 chr10 43410200 Intergenic 6 69095 CEU:1.0;0.847, CHB:1.0;0.642, JPT:1.0;0.574 FUNCTIONAL_SNP rs3121324 chr10 43379515 Intergenic 7 38410 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs2744088 chr10 43340130 Intergenic 7 975 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2077626 chr10 43410962 Intergenic 7 69857 CEU:1.0;0.847, CHB:1.0;0.642, JPT:1.0;0.526 FUNCTIONAL_SNP rs2795500 chr10 43340045 Intergenic 7 1060 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs2795508 chr10 43353555 Intergenic 7 12450 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs1891324 chr10 43399581 Intergenic 7 58476 CEU:1.0;0.847, CHB:1.0;0.642, JPT:1.0;0.526 LEAD_SNP rs2742234 chr10 43612609 Intron 5b ASSOCIATION 19196962 Hirschsprung's disease 17.3979400087 RET LEAD_SNP rs2503875 chr10 43814049 Intergenic 5b ASSOCIATION 20598377 Multiple sclerosis 6.69897000434 RASGEF1A - FXYD4 FUNCTIONAL_SNP rs2503867 chr10 43806538 Intergenic 3a 7511 CEU:1.0;1.0, CHB:1.0;0.767, JPT:1.0;0.899, YRI:1.0;1.0 FUNCTIONAL_SNP rs2503874 chr10 43811356 Intergenic 4 2693 CEU:1.0;1.0, CHB:1.0;0.776, JPT:1.0;0.908, YRI:1.0;1.0 FUNCTIONAL_SNP rs2505517 chr10 43808524 Intergenic 5b 5525 CEU:1.0;1.0, CHB:0.94;0.722, JPT:1.0;0.908, YRI:1.0;0.66 FUNCTIONAL_SNP rs2460540 chr10 43809570 Intergenic 5b 4479 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;0.908, YRI:1.0;1.0 FUNCTIONAL_SNP rs2460538 chr10 43813446 Intergenic 7 603 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs501120 chr10 44753867 Intergenic 7 ASSOCIATION 17634449 Coronary heart disease 7.04575749056 HNRNPA3P1 - CXCL12 FUNCTIONAL_SNP rs915083 chr10 44755406 Exon,non-coding 7 1539 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs622956 chr10 44755183 Exon,non-coding 4 1316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs518594 chr10 44757107 Exon,non-coding 6 3240 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:0.964;0.813 FUNCTIONAL_SNP rs579058 chr10 44755104 Exon,non-coding 4 1237 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs604674 chr10 44756894 Intron 4 3027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.846 FUNCTIONAL_SNP rs622472 chr10 44749211 Intergenic 4 4656 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs671765 chr10 44752976 Intergenic 5a 891 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.965 FUNCTIONAL_SNP rs535949 chr10 44752330 Intergenic 5a 1537 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs503859 chr10 44753560 Intergenic 5b 307 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs535176 chr10 44747059 Intergenic 5b 6808 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs513391 chr10 44749708 Intergenic 5b 4159 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs684666 chr10 44745847 Intergenic 6 8020 CEU:1.0;0.853, CHB:1.0;0.944, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs684196 chr10 44745950 Intergenic 6 7917 CEU:1.0;0.815, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs498810 chr10 44740776 Intergenic 6 13091 CEU:1.0;0.815, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs670056 chr10 44753375 Intergenic 6 492 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs534079 chr10 44752558 Intergenic 7 1309 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs687175 chr10 44751910 Intergenic 7 1957 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2576355 chr10 44750362 Intergenic 7 3505 CEU:1.0;0.815, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs559469 chr10 44752118 Intergenic 7 1749 CEU:1.0;0.927, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs510785 chr10 44749990 Intergenic 7 3877 CEU:1.0;0.815, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.967 FUNCTIONAL_SNP rs684521 chr10 44752523 Intergenic 7 1344 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.845 LEAD_SNP rs1746048 chr10 44775824 Intergenic 5b ASSOCIATION 21378990 Coronary heart disease 9.52287874528 HNRNPA3P1 - CXCL12 ASSOCIATION 19198609 Myocardial infarction (early onset) 8.15490195999 HNRNPA3P1 - CXCL12 FUNCTIONAL_SNP rs915083 chr10 44755406 Exon,non-coding 7 20418 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.855, YRI:0.879;0.669 FUNCTIONAL_SNP rs622956 chr10 44755183 Exon,non-coding 4 20641 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.876;0.661 FUNCTIONAL_SNP rs518594 chr10 44757107 Exon,non-coding 6 18717 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.815, YRI:0.887;0.759 FUNCTIONAL_SNP rs579058 chr10 44755104 Exon,non-coding 4 20720 CEU:1.0;1.0, CHB:0.943;0.802, JPT:1.0;0.853, YRI:0.874;0.681 FUNCTIONAL_SNP rs1746052 chr10 44778546 Intergenic 2b 2722 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;0.857 FUNCTIONAL_SNP rs604674 chr10 44756894 Intron 4 18930 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.889;0.791 FUNCTIONAL_SNP rs622472 chr10 44749211 Intergenic 4 26613 CEU:1.0;0.805, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.879;0.669 FUNCTIONAL_SNP rs671765 chr10 44752976 Intergenic 5a 22848 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.875;0.682 FUNCTIONAL_SNP rs694425 chr10 44761804 Intergenic 5a 14020 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;0.857, YRI:1.0;0.549 FUNCTIONAL_SNP rs1746050 chr10 44777188 Intergenic 5a 1364 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs535949 chr10 44752330 Intergenic 5a 23494 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.877;0.641 FUNCTIONAL_SNP rs10900001 chr10 44695585 Intergenic 5a 80239 CEU:1.0;0.824 FUNCTIONAL_SNP rs607760 chr10 44756236 Intron 5b 19588 CEU:1.0;1.0, CHB:0.941;0.796, JPT:1.0;0.853 FUNCTIONAL_SNP rs523297 chr10 44756557 Intron 5b 19267 CEU:1.0;0.923 FUNCTIONAL_SNP rs503859 chr10 44753560 Intergenic 5b 22264 CEU:1.0;1.0, CHB:0.89;0.753, JPT:1.0;0.857, YRI:0.874;0.657 FUNCTIONAL_SNP rs634963 chr10 44760033 Intergenic 5b 15791 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;0.853, YRI:1.0;0.961 FUNCTIONAL_SNP rs1746049 chr10 44776310 Intergenic 5b 486 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs535176 chr10 44747059 Intergenic 5b 28765 CEU:1.0;0.805, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.877;0.641 FUNCTIONAL_SNP rs513391 chr10 44749708 Intergenic 5b 26116 CEU:1.0;0.805, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.879;0.669 FUNCTIONAL_SNP rs1657346 chr10 44777560 Intergenic 6 1736 CEU:1.0;0.923 FUNCTIONAL_SNP rs684666 chr10 44745847 Intergenic 6 29977 CEU:1.0;0.844, CHB:1.0;0.828, JPT:1.0;0.851, YRI:0.877;0.663 FUNCTIONAL_SNP rs684196 chr10 44745950 Intergenic 6 29874 CEU:1.0;0.805, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.879;0.669 FUNCTIONAL_SNP rs1632484 chr10 44773984 Intergenic 6 1840 CEU:1.0;1.0, YRI:1.0;0.575 FUNCTIONAL_SNP rs498810 chr10 44740776 Intergenic 6 35048 CEU:1.0;0.805, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.877;0.663 FUNCTIONAL_SNP rs670056 chr10 44753375 Intergenic 6 22449 CEU:1.0;0.922, CHB:0.942;0.797, JPT:1.0;0.857, YRI:0.913;0.688 FUNCTIONAL_SNP rs559580 chr10 44752078 Intergenic 6 23746 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.857 FUNCTIONAL_SNP rs487465 chr10 44758197 Intergenic 7 17627 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.857, YRI:1.0;0.897 FUNCTIONAL_SNP rs534079 chr10 44752558 Intergenic 7 23266 CEU:1.0;1.0, CHB:0.943;0.802, JPT:1.0;0.857, YRI:0.876;0.662 FUNCTIONAL_SNP rs687175 chr10 44751910 Intergenic 7 23914 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.877;0.641 FUNCTIONAL_SNP rs607363 chr10 44761623 Intergenic 7 14201 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;0.857, YRI:1.0;0.93 FUNCTIONAL_SNP rs479596 chr10 44760473 Intergenic 7 15351 CEU:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs573141 chr10 44758587 Intergenic 7 17237 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.857, YRI:1.0;0.897 FUNCTIONAL_SNP rs620828 chr10 44760958 Intergenic 7 14866 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;0.857, YRI:1.0;0.93 FUNCTIONAL_SNP rs541483 chr10 44746395 Intergenic 7 29429 CEU:1.0;0.859, CHB:0.941;0.794, JPT:1.0;0.853 FUNCTIONAL_SNP rs620356 chr10 44761073 Intergenic 7 14751 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;0.857, YRI:1.0;0.93 FUNCTIONAL_SNP rs559469 chr10 44752118 Intergenic 7 23706 CEU:1.0;0.927, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.877;0.641 FUNCTIONAL_SNP rs501120 chr10 44753867 Intergenic 7 21957 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.853, YRI:0.879;0.669 FUNCTIONAL_SNP rs510785 chr10 44749990 Intergenic 7 25834 CEU:1.0;0.805, CHB:0.942;0.799, JPT:1.0;0.857, YRI:0.877;0.641 FUNCTIONAL_SNP rs2576354 chr10 44750393 Intergenic 7 25431 CEU:1.0;0.805, CHB:0.944;0.805, JPT:1.0;0.857 FUNCTIONAL_SNP rs2576355 chr10 44750362 Intergenic 7 25462 CEU:1.0;0.805, CHB:0.944;0.805, JPT:1.0;0.857, YRI:0.877;0.662 FUNCTIONAL_SNP rs684521 chr10 44752523 Intergenic 7 23301 CEU:1.0;1.0, CHB:0.944;0.805, JPT:1.0;0.855, YRI:0.864;0.538 LEAD_SNP rs11239177 chr10 45123379 Intergenic 4 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.52287874528 RPL9P21 - TMEM72 FUNCTIONAL_SNP rs10900070 chr10 45064840 Intergenic 2b 58539 CEU:1.0;0.961 FUNCTIONAL_SNP rs11239148 chr10 45064931 Intergenic 2b 58448 CEU:1.0;0.961 FUNCTIONAL_SNP rs11239147 chr10 45064917 Intergenic 4 58462 CEU:1.0;0.96 FUNCTIONAL_SNP rs17408014 chr10 45065405 Intergenic 4 57974 CEU:1.0;0.961 FUNCTIONAL_SNP rs11239149 chr10 45065276 Intergenic 4 58103 CEU:1.0;0.96 FUNCTIONAL_SNP rs10160186 chr10 45061621 Intergenic 5a 61758 CEU:1.0;0.961 FUNCTIONAL_SNP rs12242558 chr10 45066526 Intergenic 5a 56853 CEU:1.0;0.96 FUNCTIONAL_SNP rs10047393 chr10 45061109 Intergenic 5a 62270 CEU:1.0;0.961 FUNCTIONAL_SNP rs11239139 chr10 45062495 Intergenic 5a 60884 CEU:1.0;0.922 FUNCTIONAL_SNP rs2061971 chr10 45089053 Intron 5b 34326 CEU:1.0;0.961, YRI:1.0;0.825 FUNCTIONAL_SNP rs11239151 chr10 45067297 Intergenic 5b 56082 CEU:1.0;0.953 FUNCTIONAL_SNP rs899890 chr10 45073176 Intergenic 5b 50203 CEU:1.0;0.956 FUNCTIONAL_SNP rs10793544 chr10 45060304 Intergenic 5b 63075 CEU:1.0;0.961 FUNCTIONAL_SNP rs10793545 chr10 45063071 Intergenic 5b 60308 CEU:1.0;0.961 FUNCTIONAL_SNP rs10793546 chr10 45063108 Intergenic 5b 60271 CEU:0.957;0.878 FUNCTIONAL_SNP rs10793547 chr10 45064723 Intergenic 5b 58656 CEU:1.0;0.961 FUNCTIONAL_SNP rs10793548 chr10 45064764 Intergenic 5b 58615 CEU:1.0;0.961 FUNCTIONAL_SNP rs12254041 chr10 45079025 Intergenic 5b 44354 CEU:1.0;0.961 FUNCTIONAL_SNP rs11239141 chr10 45063228 Intergenic 5b 60151 CEU:1.0;0.961 FUNCTIONAL_SNP rs12244967 chr10 45077687 Intergenic 5b 45692 CEU:1.0;0.96, YRI:0.956;0.778 FUNCTIONAL_SNP rs1021055 chr10 45073211 Intergenic 5b 50168 CEU:1.0;0.961 FUNCTIONAL_SNP rs989077 chr10 45074117 Intergenic 6 49262 CEU:1.0;0.961 FUNCTIONAL_SNP rs12243864 chr10 45081159 Intergenic 6 42220 CEU:1.0;0.961 FUNCTIONAL_SNP rs1999775 chr10 45081343 Intergenic 6 42036 CEU:0.953;0.908 FUNCTIONAL_SNP rs11239142 chr10 45063329 Intergenic 6 60050 CEU:1.0;0.96 FUNCTIONAL_SNP rs1383375 chr10 45101255 Intergenic 6 22124 CEU:1.0;0.961, YRI:1.0;0.732 FUNCTIONAL_SNP rs11239135 chr10 45062092 Intergenic 6 61287 CEU:1.0;0.96 FUNCTIONAL_SNP rs11239143 chr10 45063388 Intergenic 6 59991 CEU:1.0;0.907 FUNCTIONAL_SNP rs10900073 chr10 45066992 Intergenic 6 56387 CEU:1.0;0.961 FUNCTIONAL_SNP rs994178 chr10 45103415 Intergenic 7 19964 CEU:1.0;0.961, YRI:1.0;0.646 FUNCTIONAL_SNP rs7083920 chr10 45071890 Intergenic 7 51489 CEU:1.0;0.961 FUNCTIONAL_SNP rs10159760 chr10 45059741 Intergenic 7 63638 CEU:0.96;0.921 FUNCTIONAL_SNP rs11239154 chr10 45073400 Intergenic 7 49979 CEU:1.0;0.961 FUNCTIONAL_SNP rs1999774 chr10 45081394 Intergenic 7 41985 CEU:1.0;0.961 FUNCTIONAL_SNP rs7069381 chr10 45104415 Intergenic 7 18964 CEU:1.0;0.961, YRI:1.0;0.646 FUNCTIONAL_SNP rs899889 chr10 45072819 Intergenic 7 50560 CEU:1.0;0.922 FUNCTIONAL_SNP rs1904836 chr10 45117122 Intergenic 7 6257 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.793 FUNCTIONAL_SNP rs1904837 chr10 45117466 Intergenic 7 5913 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs10900068 chr10 45062732 Intergenic 7 60647 CEU:1.0;0.96 FUNCTIONAL_SNP rs1002589 chr10 45126887 Intergenic 7 3508 CEU:1.0;1.0, CHB:1.0;0.518, JPT:1.0;0.626, YRI:1.0;0.858 FUNCTIONAL_SNP rs11239136 chr10 45062251 Intergenic 7 61128 CEU:1.0;0.96 FUNCTIONAL_SNP rs10900069 chr10 45062758 Intergenic 7 60621 CEU:1.0;0.961 FUNCTIONAL_SNP rs10159976 chr10 45059905 Intergenic 7 63474 CEU:1.0;0.961 FUNCTIONAL_SNP rs10900075 chr10 45073383 Intergenic 7 49996 CEU:1.0;0.961 FUNCTIONAL_SNP rs10900072 chr10 45066922 Intergenic 7 56457 CEU:1.0;0.96 FUNCTIONAL_SNP rs4350324 chr10 45084553 Intergenic 7 38826 CEU:1.0;0.961 FUNCTIONAL_SNP rs11239157 chr10 45078170 Intergenic 7 45209 CEU:1.0;0.961 FUNCTIONAL_SNP rs11239145 chr10 45063631 Intergenic 7 59748 CEU:1.0;0.961 FUNCTIONAL_SNP rs1585913 chr10 45117976 Intergenic 7 5403 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.773 FUNCTIONAL_SNP rs10047358 chr10 45060874 Intergenic 7 62505 CEU:1.0;0.961 LEAD_SNP rs1480597 chr10 45161109 Intergenic 5a ASSOCIATION 17052657 Parkinson's disease 5.69897000434 RPL9P21 - TMEM72 LEAD_SNP rs7911712 chr10 45319654 Intron 5a ASSOCIATION 20709820 Emphysema-related traits 5.22184874962 RPL9P21 - TMEM72 FUNCTIONAL_SNP rs10900114 chr10 45307205 Exon,non-coding 5b 12449 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs10900117 chr10 45316266 Intron 4 3388 CEU:1.0;1.0 FUNCTIONAL_SNP rs1749325 chr10 45301128 Intergenic 4 18526 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs7912668 chr10 45319614 Intron 5a 40 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1771985 chr10 45270046 Intergenic 5a 49608 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1749331 chr10 45269715 Intergenic 5a 49939 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs17414426 chr10 45322106 Intron 5b 2452 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs11239239 chr10 45262481 Intergenic 5b 57173 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11239240 chr10 45265145 Intergenic 5b 54509 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11593530 chr10 45324089 Intron 5b 4435 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1977325 chr10 45325481 Intron 5b 5827 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1831671 chr10 45330896 Intron 5b 11242 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12357368 chr10 45320107 Intron 5b 453 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs1590559 chr10 45277258 Intergenic 6 42396 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2611374 chr10 45280664 Intergenic 6 38990 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2764351 chr10 45279503 Intergenic 6 40151 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2094018 chr10 45307940 Intron 6 11714 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2764361 chr10 45272488 Intergenic 6 47166 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1253325 chr10 45285416 Intergenic 6 34238 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1749333 chr10 45270173 Intergenic 6 49481 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11239258 chr10 45331733 Intron 7 12079 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2611373 chr10 45279124 Intergenic 7 40530 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2611375 chr10 45264580 Intergenic 7 55074 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2764349 chr10 45280531 Intergenic 7 39123 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2764350 chr10 45280186 Intergenic 7 39468 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs17157056 chr10 45315417 Intron 7 4237 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2793312 chr10 45298408 Intergenic 7 21246 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11239254 chr10 45322292 Intron 7 2638 CEU:1.0;0.879, CHB:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs11239242 chr10 45272235 Intergenic 7 47419 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11239246 chr10 45308276 Intron 7 11378 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2793298 chr10 45278623 Intergenic 7 41031 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1771990 chr10 45269125 Intergenic 7 50529 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1771981 chr10 45301661 Intergenic 7 17993 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2793308 chr10 45271211 Intergenic 7 48443 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1771999 chr10 45291982 Intergenic 7 27672 CEU:1.0;0.899, CHB:1.0;1.0 FUNCTIONAL_SNP rs2793296 chr10 45280577 Intergenic 7 39077 CEU:1.0;1.0 FUNCTIONAL_SNP rs2793297 chr10 45279652 Intergenic 7 40002 CEU:1.0;1.0 FUNCTIONAL_SNP rs1325160 chr10 45281631 Intergenic 7 38023 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2793299 chr10 45278592 Intergenic 7 41062 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs10900118 chr10 45321347 Intron 7 1693 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs7901009 chr10 45319954 Intron 7 300 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2793301 chr10 45277833 Intergenic 7 41821 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs2279434 chr10 45955064 Intron 7 ASSOCIATION 20139978 Hematological and biochemical traits 11.3979400087 MARCH8 LEAD_SNP rs11239550 chr10 46024729 Intron 7 ASSOCIATION 19862010 Mean corpuscular volume 10.0 MARCH8 FUNCTIONAL_SNP rs7908745 chr10 45953767 Coding 6 70962 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.777 FUNCTIONAL_SNP rs7086046 chr10 46076235 Intron 4 51506 CEU:1.0;0.813 FUNCTIONAL_SNP rs10900222 chr10 45997366 Intron 5a 27363 CEU:1.0;0.95, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.791 FUNCTIONAL_SNP rs2291429 chr10 45958881 Intron 5b 65848 CEU:1.0;0.841 FUNCTIONAL_SNP rs10900220 chr10 45983922 Intron 5b 40807 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.777 FUNCTIONAL_SNP rs1982796 chr10 46042573 Intron 6 17844 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10793620 chr10 46087283 Intron 7 62554 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs970548 chr10 46013277 Intron 7 11452 CEU:1.0;0.813 FUNCTIONAL_SNP rs11239541 chr10 46001866 Intron 7 22863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.777 FUNCTIONAL_SNP rs10466245 chr10 46031747 Intron 7 7018 CEU:1.0;0.802, YRI:1.0;0.575 FUNCTIONAL_SNP rs11239548 chr10 46018168 Intron 7 6561 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.777 FUNCTIONAL_SNP rs11239535 chr10 45978387 Intron 7 46342 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.777 FUNCTIONAL_SNP rs11239545 chr10 46012245 Intron 7 12484 CEU:1.0;0.813 FUNCTIONAL_SNP rs10900223 chr10 46021631 Intron 7 3098 CEU:1.0;0.838, YRI:1.0;0.632 LEAD_SNP rs4838605 chr10 49699957 Intron 5b ASSOCIATION 21310492 Diabetic retinopathy 8.69897000434 ARHGAP22 LEAD_SNP rs10776612 chr10 49735563 Intron 6 ASSOCIATION 20585324 Conduct disorder (case status) 5.69897000434 ARHGAP22 LEAD_SNP rs11101442 chr10 49936336 Intron 7 ASSOCIATION 19165918 Systemic lupus erythematosus 5.52287874528 WDFY4 FUNCTIONAL_SNP rs2377627 chr10 49938881 Intron 6 2545 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7097397 chr10 50025396 Coding 5b ASSOCIATION 20169177 Systemic lupus erythematosus 11.096910013 WDFY4 LEAD_SNP rs3849150 chr10 50109223 Intron 7 ASSOCIATION 17903303 Subclinical atherosclerosis traits (other) 5.69897000434 WDFY4 LEAD_SNP rs1913517 chr10 50119054 Intron 7 ASSOCIATION 19838193 Systemic lupus erythematosus 11.15490196 WDFY4;LRRC18 LEAD_SNP rs2244967 chr10 50224766 Intron 7 ASSOCIATION 21294900 Serum uric acid 5.30102999566 C10orf72 FUNCTIONAL_SNP rs2254410 chr10 50238355 Intron 5a 13589 CEU:1.0;0.936, CHB:1.0;0.946, JPT:1.0;0.939, YRI:0.96;0.886 FUNCTIONAL_SNP rs1055583 chr10 50226334 Intron 5a 1568 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1913521 chr10 50233121 Intron 5b 8355 CEU:1.0;0.936, CHB:1.0;0.946, JPT:1.0;0.939, YRI:1.0;1.0 FUNCTIONAL_SNP rs2137920 chr10 50229638 Intron 5b 4872 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs2243994 chr10 50232286 Intron 5b 7520 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.939, YRI:1.0;1.0 FUNCTIONAL_SNP rs2253873 chr10 50242808 Intron 6 18042 CEU:1.0;0.936, CHB:1.0;0.946, JPT:1.0;0.939, YRI:1.0;0.924 FUNCTIONAL_SNP rs2254393 chr10 50238874 Intron 7 14108 CEU:1.0;0.936, CHB:1.0;0.946, JPT:1.0;0.939, YRI:1.0;0.924 FUNCTIONAL_SNP rs1877805 chr10 50234345 Intron 7 9579 CEU:1.0;0.936, CHB:1.0;0.946, JPT:1.0;0.881, YRI:1.0;0.924 LEAD_SNP rs4838508 chr10 50561507 Intergenic 6 ASSOCIATION 20041166 HIV-1 control 5.69897000434 C10orf71 - DRGX LEAD_SNP rs3123078 chr10 51524971 Intron 4 ASSOCIATION 19767753 Prostate cancer 19.0 AGAP7 - RPL23AP61 FUNCTIONAL_SNP rs7071471 chr10 51503335 Intron 2b 21636 CEU:1.0;0.959, CHB:0.95;0.903, JPT:1.0;1.0 FUNCTIONAL_SNP rs11004422 chr10 51498336 Intron 3a 26635 CEU:1.0;0.877, CHB:0.95;0.861, JPT:1.0;0.909, YRI:1.0;0.565 FUNCTIONAL_SNP rs2611513 chr10 51515457 Intron 3a 9514 CEU:1.0;0.919, CHB:0.952;0.906, JPT:1.0;0.953, YRI:1.0;0.772 FUNCTIONAL_SNP rs7098889 chr10 51544475 Intron 4 19504 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs4631830 chr10 51543344 Intron 4 18373 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2926494 chr10 51517356 Intron 4 7615 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.952, YRI:0.901;0.657 FUNCTIONAL_SNP rs2611489 chr10 51524889 Intron 4 82 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7090326 chr10 51503375 Intron 4 21596 CEU:1.0;0.848, CHB:0.952;0.906, JPT:1.0;0.909 FUNCTIONAL_SNP rs2611508 chr10 51518047 Intron 4 6924 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:0.948;0.693 FUNCTIONAL_SNP rs2611512 chr10 51515534 Intron 4 9437 CEU:1.0;0.848, CHB:0.952;0.906, JPT:1.0;0.909 FUNCTIONAL_SNP rs11006274 chr10 51540291 Intron 4 15320 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.88;0.694 FUNCTIONAL_SNP rs4304716 chr10 51544587 Intron 4 19616 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7075697 chr10 51547371 Intron 4 22400 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2012677 chr10 51504797 Intron 5a 20174 CEU:1.0;0.848, CHB:1.0;0.954, JPT:1.0;0.909 FUNCTIONAL_SNP rs10763534 chr10 51534920 Intron 5a 9949 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.826 FUNCTIONAL_SNP rs4131357 chr10 51537292 Intron 5a 12321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs2843549 chr10 51521247 Intron 5a 3724 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7075009 chr10 51544143 Intron 5a 19172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs4512771 chr10 51540906 Intron 5b 15935 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.878;0.689 FUNCTIONAL_SNP rs10825652 chr10 51510761 Intron 5b 14210 CEU:1.0;0.959, CHB:0.95;0.861, JPT:1.0;1.0 FUNCTIONAL_SNP rs10763588 chr10 51539762 Intron 5b 14791 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.909 FUNCTIONAL_SNP rs4630243 chr10 51540867 Intron 5b 15896 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.902 FUNCTIONAL_SNP rs4935162 chr10 51525699 Intron 5b 728 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2249986 chr10 51521684 Intron 6 3287 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.905 FUNCTIONAL_SNP rs10826125 chr10 51530505 Intron 6 5534 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.907, YRI:1.0;0.585 FUNCTIONAL_SNP rs10763546 chr10 51536399 Intron 6 11428 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs7077830 chr10 51522276 Intron 6 2695 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs10826127 chr10 51530757 Intron 7 5786 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs4581397 chr10 51532367 Intron 7 7396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.877;0.688 FUNCTIONAL_SNP rs7920517 chr10 51532621 Intron 7 7650 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs2843554 chr10 51523861 Intron 7 1110 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:0.744;0.528 FUNCTIONAL_SNP rs11004324 chr10 51496623 Intron 7 28348 CEU:0.954;0.801, CHB:0.95;0.861, JPT:1.0;0.953 FUNCTIONAL_SNP rs9787697 chr10 51533376 Intron 7 8405 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.907 FUNCTIONAL_SNP rs2843560 chr10 51512129 Intron 7 12842 CEU:1.0;0.848, CHB:0.952;0.906, JPT:1.0;0.909 FUNCTIONAL_SNP rs6481329 chr10 51529746 Intron 7 4775 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909, YRI:1.0;0.533 FUNCTIONAL_SNP rs7081532 chr10 51526093 Intron 7 1122 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:0.953;0.798 FUNCTIONAL_SNP rs4306255 chr10 51542444 Intron 7 17473 CEU:1.0;0.958, CHB:1.0;1.0, JPT:0.95;0.86 FUNCTIONAL_SNP rs10763576 chr10 51538813 Intron 7 13842 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909, YRI:0.889;0.79 FUNCTIONAL_SNP rs4630241 chr10 51532751 Intron 7 7780 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs11006207 chr10 51538176 Intron 7 13205 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909 LEAD_SNP rs10993994 chr10 51549496 Intron 7 ASSOCIATION 21743057 Prostate cancer 5.30102999566 MSMB ASSOCIATION 21160077 Serum prostate-specific antigen levels 12.15490196 MSMB ASSOCIATION 20676098 Prostate cancer 7.52287874528 MSMB ASSOCIATION 18264097 Prostate cancer 28.0457574906 MSMB ASSOCIATION 18264096 Prostate cancer 12.15490196 MSMB LEAD_SNP rs7085433 chr10 51593354 Exon,non-coding 5a ASSOCIATION 20139978 Hematological and biochemical traits 9.22184874962 TIMM23 ASSOCIATION 20139978 Hematological and biochemical traits 8.15490195999 TIMM23 LEAD_SNP rs1733724 chr10 54223977 Intergenic 7 ASSOCIATION 21076409 Ventricular conduction 7.52287874528 RPL31P44 - MBL2 ASSOCIATION 20062063 Electrocardiographic traits 7.15490195999 RPL31P44 - MBL2 FUNCTIONAL_SNP rs1194743 chr10 54212597 Intron 2b 11380 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs583012 chr10 55294874 Intergenic 7 ASSOCIATION 17903293 Select biomarker traits 5.69897000434 MBL2 - PCDH15 LEAD_SNP rs10740609 chr10 56790969 Intron 6 ASSOCIATION 20966902 Weight 5.30102999566 PCDH15 - GAPDHP21 LEAD_SNP rs1916521 chr10 57416961 Intergenic 6 ASSOCIATION 21348951 Cardiac hypertrophy 6.30102999566 PCDH15 - GAPDHP21 FUNCTIONAL_SNP rs2461897 chr10 57413461 Intergenic 6 3500 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1919700 chr10 57411294 Intergenic 6 5667 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.578 FUNCTIONAL_SNP rs1916527 chr10 57401749 Intergenic 7 15212 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs2244956 chr10 57414479 Intergenic 7 2482 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2243510 chr10 57417813 Intergenic 7 852 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.848 LEAD_SNP rs4462262 chr10 59189178 Intergenic 6 ASSOCIATION 21310492 Diabetic retinopathy 7.04575749056 ZWINT - MRPS35P3 FUNCTIONAL_SNP rs7076034 chr10 59172007 Intergenic 6 17171 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs10826028 chr10 59174427 Intergenic 7 14751 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs4396208 chr10 59177066 Intergenic 7 12112 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs7077068 chr10 59176243 Intergenic 7 12935 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs4359127 chr10 59169986 Intergenic 7 19192 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs4582895 chr10 59172537 Intergenic 7 16641 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs4341457 chr10 59172688 Intergenic 7 16490 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs4333947 chr10 59172565 Intergenic 7 16613 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 LEAD_SNP rs1819658 chr10 59913151 Intergenic 6 ASSOCIATION 21102463 Crohn's disease 16.0457574906 MRPS35P3 - IPMK FUNCTIONAL_SNP rs2590370 chr10 60049020 Exon,non-coding 7 135869 CEU:0.937;0.825, CHB:0.9;0.81, JPT:0.898;0.769 FUNCTIONAL_SNP rs2251039 chr10 60028894 Exon,non-coding 4 115743 CEU:0.936;0.825, CHB:0.899;0.77, JPT:0.902;0.813 FUNCTIONAL_SNP rs1698396 chr10 59937308 Intergenic 2a 24157 CEU:0.937;0.826, CHB:0.9;0.81, JPT:0.902;0.813 FUNCTIONAL_SNP rs1769005 chr10 59935940 Intergenic 2b 22789 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1698402 chr10 59936444 Intergenic 2b 23293 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2590322 chr10 59999931 Intron 2b 86780 CEU:0.93;0.81, CHB:0.891;0.794, JPT:0.899;0.809 FUNCTIONAL_SNP rs2590351 chr10 60016075 Intron 2b 102924 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.898;0.769 FUNCTIONAL_SNP rs1416763 chr10 60029163 Intron 4 116012 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1416764 chr10 60040351 Intron 4 127200 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.898;0.769 FUNCTIONAL_SNP rs1698403 chr10 59935841 Intergenic 4 22690 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2590363 chr10 60024712 Intron 4 111561 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2590367 chr10 60041574 Intron 4 128423 CEU:0.937;0.825, CHB:0.9;0.81, JPT:0.851;0.724 FUNCTIONAL_SNP rs2790170 chr10 60028507 Intergenic 4 115356 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2790178 chr10 60034083 Intron 4 120932 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.898;0.769 FUNCTIONAL_SNP rs2790189 chr10 60042576 Intron 4 129425 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.838;0.637 FUNCTIONAL_SNP rs2790218 chr10 59997301 Intron 4 84150 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2590349 chr10 60014646 Intron 4 101495 CEU:0.933;0.816, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2253192 chr10 59999323 Intron 4 86172 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2790179 chr10 60035372 Intron 5a 122221 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.898;0.769 FUNCTIONAL_SNP rs2590324 chr10 60000951 Intron 5b 87800 CEU:0.936;0.823, CHB:0.882;0.777, JPT:0.941;0.836 FUNCTIONAL_SNP rs2590339 chr10 60012231 Intron 5b 99080 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2440845 chr10 59971884 Intron 5b 58733 CEU:0.937;0.825, CHB:0.891;0.72, JPT:0.898;0.768 FUNCTIONAL_SNP rs2590364 chr10 60038406 Intron 5b 125255 CEU:0.934;0.818, CHB:0.902;0.814, JPT:0.893;0.758 FUNCTIONAL_SNP rs1698468 chr10 59961590 Intron 5b 48439 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.899;0.809 FUNCTIONAL_SNP rs2790168 chr10 60025448 Intron 5b 112297 CEU:0.937;0.825, CHB:0.9;0.81, JPT:0.902;0.813 FUNCTIONAL_SNP rs2790172 chr10 60008464 Intron 5b 95313 CEU:0.937;0.826 FUNCTIONAL_SNP rs2790188 chr10 60042186 Intron 5b 129035 CEU:0.934;0.818, CHB:0.892;0.795, JPT:0.889;0.751 FUNCTIONAL_SNP rs1867571 chr10 60038850 Intron 5b 125699 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.898;0.769 FUNCTIONAL_SNP rs2790216 chr10 59997926 Intron 5b 84775 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2790217 chr10 59997644 Intron 5b 84493 CEU:0.931;0.81, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1199072 chr10 59924582 Intergenic 5b 11431 CEU:0.937;0.826, CHB:1.0;0.909, JPT:1.0;0.953 FUNCTIONAL_SNP rs1199096 chr10 59950234 Intergenic 5b 37083 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1199107 chr10 59943709 Intergenic 6 30558 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1769016 chr10 59929993 Intergenic 6 16842 CEU:0.937;0.825, CHB:1.0;0.908, JPT:0.951;0.905 FUNCTIONAL_SNP rs1769025 chr10 59928166 Intergenic 6 15015 CEU:0.937;0.826, CHB:1.0;0.909, JPT:1.0;0.953 FUNCTIONAL_SNP rs954951 chr10 59934101 Intergenic 6 20950 CEU:0.937;0.826, CHB:1.0;0.909, JPT:0.95;0.86 FUNCTIONAL_SNP rs2590307 chr10 59977161 Intron 6 64010 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2590305 chr10 59973844 Intron 6 60693 CEU:0.937;0.879, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1698407 chr10 59933731 Intergenic 6 20580 CEU:0.937;0.825, CHB:1.0;0.908, JPT:0.95;0.86 FUNCTIONAL_SNP rs2590316 chr10 59987439 Intron 6 74288 CEU:0.937;0.826, CHB:0.895;0.728, JPT:0.902;0.813 FUNCTIONAL_SNP rs2019022 chr10 60024052 Intron 6 110901 CEU:0.937;0.826, CHB:0.897;0.804, JPT:0.899;0.809 FUNCTIONAL_SNP rs2486486 chr10 60046654 Intron 6 133503 CEU:0.934;0.818, CHB:0.902;0.814, JPT:0.898;0.769 FUNCTIONAL_SNP rs2790149 chr10 59956556 Intron 6 43405 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2790156 chr10 59974721 Intron 6 61570 CEU:0.935;0.873, CHB:0.894;0.8, JPT:0.942;0.839 FUNCTIONAL_SNP rs1111821 chr10 59935221 Intergenic 6 22070 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.894;0.799 FUNCTIONAL_SNP rs2790161 chr10 59968090 Intron 6 54939 CEU:0.933;0.816, CHB:0.891;0.794, JPT:0.946;0.851 FUNCTIONAL_SNP rs2095892 chr10 60023719 Intron 6 110568 CEU:0.937;0.825, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2790167 chr10 60024470 Intron 6 111319 CEU:0.937;0.826, CHB:0.9;0.81, JPT:0.902;0.813 FUNCTIONAL_SNP rs2790182 chr10 60039877 Intron 6 126726 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.898;0.769 FUNCTIONAL_SNP rs1867572 chr10 60038940 Intron 6 125789 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.898;0.769 FUNCTIONAL_SNP rs1867573 chr10 60042972 Intron 6 129821 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.898;0.769 FUNCTIONAL_SNP rs2153282 chr10 59972416 Intron 6 59265 CEU:0.936;0.825, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2790236 chr10 59985102 Intron 6 71951 CEU:0.934;0.819, CHB:0.902;0.814, JPT:0.947;0.815 FUNCTIONAL_SNP rs2790242 chr10 59980652 Intron 6 67501 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1618814 chr10 59963477 Intron 6 50326 CEU:0.937;0.826, CHB:0.897;0.804, JPT:0.902;0.813 FUNCTIONAL_SNP rs2653505 chr10 59964142 Intron 6 50991 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2590359 chr10 60021247 Intron 6 108096 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1550773 chr10 60044441 Intron 6 131290 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.893;0.758 FUNCTIONAL_SNP rs1199077 chr10 59926486 Intergenic 6 13335 CEU:0.937;0.826, CHB:1.0;0.909, JPT:1.0;0.953 FUNCTIONAL_SNP rs1199078 chr10 59926535 Intergenic 6 13384 CEU:0.937;0.826, CHB:1.0;0.909, JPT:1.0;0.953 FUNCTIONAL_SNP rs1199098 chr10 59949736 Intergenic 6 36585 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1199100 chr10 59948044 Intergenic 6 34893 CEU:1.0;0.925, CHB:0.886;0.786, JPT:0.881;0.777 FUNCTIONAL_SNP rs1199103 chr10 59947231 Intergenic 6 34080 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1630731 chr10 59959530 Intron 7 46379 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.899;0.809 FUNCTIONAL_SNP rs2455577 chr10 59964707 Intron 7 51556 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1769003 chr10 59937590 Intergenic 7 24439 CEU:0.93;0.81, CHB:0.9;0.809, JPT:0.939;0.832 FUNCTIONAL_SNP rs1769006 chr10 59935547 Intergenic 7 22396 CEU:0.936;0.825, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1416759 chr10 59929512 Intergenic 7 16361 CEU:0.937;0.826, CHB:1.0;0.909, JPT:0.951;0.905 FUNCTIONAL_SNP rs1416766 chr10 59978237 Intron 7 65086 CEU:0.927;0.801, CHB:0.896;0.802, JPT:0.899;0.809 FUNCTIONAL_SNP rs1769023 chr10 59928337 Intergenic 7 15186 CEU:0.932;0.868, CHB:1.0;0.907, JPT:1.0;0.953 FUNCTIONAL_SNP rs1769024 chr10 59928315 Intergenic 7 15164 CEU:0.937;0.826, CHB:1.0;0.909, JPT:1.0;0.953 FUNCTIONAL_SNP rs2590306 chr10 59976966 Intron 7 63815 CEU:0.937;0.825, CHB:0.9;0.81, JPT:0.891;0.687 FUNCTIONAL_SNP rs1698382 chr10 59928282 Intergenic 7 15131 CEU:0.937;0.826, CHB:1.0;0.909, JPT:1.0;0.953 FUNCTIONAL_SNP rs1769044 chr10 59958956 Intron 7 45805 CEU:0.937;0.826, CHB:0.9;0.809, JPT:0.898;0.769 FUNCTIONAL_SNP rs1769045 chr10 59960522 Intron 7 47371 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2590299 chr10 59969000 Intron 7 55849 CEU:0.937;0.826, CHB:0.898;0.807, JPT:0.902;0.813 FUNCTIONAL_SNP rs1698404 chr10 59935460 Intergenic 7 22309 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1698408 chr10 59933536 Intergenic 7 20385 CEU:0.937;0.826, CHB:0.95;0.861, JPT:0.95;0.86 FUNCTIONAL_SNP rs2590313 chr10 59986383 Intron 7 73232 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2590315 chr10 59986492 Intron 7 73341 CEU:0.934;0.818, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2590357 chr10 60019964 Intron 7 106813 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2590358 chr10 60020982 Intron 7 107831 CEU:0.937;0.826, CHB:0.897;0.804, JPT:0.895;0.763 FUNCTIONAL_SNP rs2440855 chr10 59964744 Intron 7 51593 CEU:0.937;0.826, CHB:0.9;0.81, JPT:0.902;0.813 FUNCTIONAL_SNP rs2590368 chr10 60043482 Intron 7 130331 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.898;0.769 FUNCTIONAL_SNP rs1308356 chr10 59927315 Intergenic 7 14164 CEU:0.934;0.818, CHB:1.0;0.909, JPT:1.0;0.953 FUNCTIONAL_SNP rs1308358 chr10 59927759 Intergenic 7 14608 CEU:0.931;0.866, CHB:1.0;0.909, JPT:1.0;0.95 FUNCTIONAL_SNP rs2486483 chr10 60003000 Intron 7 89849 CEU:0.937;0.826, CHB:0.891;0.689, JPT:0.902;0.813 FUNCTIONAL_SNP rs2486491 chr10 59970391 Intron 7 57240 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2790154 chr10 59974788 Intron 7 61637 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2095894 chr10 59968671 Intron 7 55520 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2790169 chr10 60025654 Intron 7 112503 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2153281 chr10 59972453 Intron 7 59302 CEU:0.937;0.826, CHB:0.899;0.77, JPT:0.899;0.809 FUNCTIONAL_SNP rs2153283 chr10 59972299 Intron 7 59148 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.948;0.856 FUNCTIONAL_SNP rs2790241 chr10 60015313 Intron 7 102162 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs2790244 chr10 59979245 Intron 7 66094 CEU:0.937;0.826, CHB:0.895;0.728, JPT:0.902;0.813 FUNCTIONAL_SNP rs2254775 chr10 60036815 Intron 7 123664 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.898;0.769 FUNCTIONAL_SNP rs1624017 chr10 59938958 Intergenic 7 25807 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1988577 chr10 60003150 Intron 7 89999 CEU:0.937;0.826, CHB:0.902;0.814, JPT:0.902;0.813 FUNCTIONAL_SNP rs1199075 chr10 59926336 Intergenic 7 13185 CEU:0.935;0.874, CHB:1.0;0.907, JPT:1.0;0.953 FUNCTIONAL_SNP rs1199076 chr10 59926451 Intergenic 7 13300 CEU:0.936;0.825, CHB:1.0;0.909, JPT:1.0;0.953 FUNCTIONAL_SNP rs1199079 chr10 59926555 Intergenic 7 13404 CEU:0.937;0.826, CHB:1.0;0.909, JPT:1.0;0.952 FUNCTIONAL_SNP rs1199083 chr10 59926835 Intergenic 7 13684 CEU:0.936;0.825, CHB:1.0;0.909, JPT:1.0;0.953 FUNCTIONAL_SNP rs1199085 chr10 59927277 Intergenic 7 14126 CEU:0.934;0.819, CHB:1.0;0.909, JPT:1.0;0.953 FUNCTIONAL_SNP rs1199086 chr10 59905815 Intergenic 7 7336 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1199091 chr10 59901559 Intergenic 7 11592 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1199097 chr10 59950010 Intergenic 7 36859 CEU:1.0;0.932, CHB:0.898;0.806, JPT:0.899;0.809 FUNCTIONAL_SNP rs1199099 chr10 59948335 Intergenic 7 35184 CEU:0.924;0.854, CHB:0.943;0.843, JPT:0.943;0.842 FUNCTIONAL_SNP rs1199101 chr10 59947901 Intergenic 7 34750 CEU:0.936;0.825, CHB:0.902;0.814, JPT:0.902;0.813 LEAD_SNP rs16912145 chr10 60082668 Intergenic 5b ASSOCIATION 20100581 Brain imaging 0 - FUNCTIONAL_SNP rs2790204 chr10 60070560 Intergenic 6 12108 CEU:1.0;1.0, CHB:0.918;0.728, JPT:0.95;0.902, YRI:1.0;0.961 LEAD_SNP rs12356193 chr10 61413353 Intron 7 ASSOCIATION 19503597 Serum uric acid 8.0 SLC16A9 LEAD_SNP rs10761482 chr10 62085337 Intron 7 ASSOCIATION 20185149 Schizophrenia 5.09691001301 ANK3 FUNCTIONAL_SNP rs10821714 chr10 62065131 Intron 3a 20206 CEU:0.952;0.906, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs990685 chr10 62098149 Intron 3a 12812 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.861;0.534 FUNCTIONAL_SNP rs10821737 chr10 62107802 Intron 4 22465 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.905;0.587 FUNCTIONAL_SNP rs1380458 chr10 62107690 Intron 5a 22353 CEU:1.0;0.817, CHB:0.876;0.687, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs7911934 chr10 62092090 Intron 5a 6753 CEU:1.0;0.906, CHB:1.0;0.901, JPT:1.0;0.93, YRI:1.0;0.72 FUNCTIONAL_SNP rs10821730 chr10 62099271 Intron 5b 13934 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs7096426 chr10 62106545 Intron 5b 21208 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs991405 chr10 62094202 Intron 5b 8865 CEU:1.0;0.861, CHB:1.0;0.95, JPT:1.0;0.93 FUNCTIONAL_SNP rs10761483 chr10 62098398 Intron 5b 13061 CEU:1.0;0.829, CHB:0.881;0.698, JPT:1.0;0.729 FUNCTIONAL_SNP rs10761484 chr10 62098458 Intron 5b 13121 CEU:1.0;0.815, CHB:0.883;0.701, JPT:1.0;0.732, YRI:0.903;0.581 FUNCTIONAL_SNP rs4456215 chr10 62103249 Intron 5b 17912 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs10740022 chr10 62062686 Intron 5b 22651 CEU:0.952;0.906, CHB:1.0;0.778, JPT:1.0;0.933 FUNCTIONAL_SNP rs2199209 chr10 62094738 Intron 6 9401 CEU:1.0;0.906, CHB:1.0;0.95, JPT:1.0;0.93, YRI:0.955;0.681 FUNCTIONAL_SNP rs2199210 chr10 62094752 Intron 6 9415 CEU:1.0;0.906, CHB:1.0;0.949, JPT:1.0;1.0, YRI:0.955;0.681 FUNCTIONAL_SNP rs2061491 chr10 62103675 Intron 6 18338 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs7097138 chr10 62106755 Intron 6 21418 CEU:1.0;0.81, CHB:0.883;0.701, JPT:0.818;0.615, YRI:0.946;0.581 FUNCTIONAL_SNP rs10740023 chr10 62088266 Intron 6 2929 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;0.8 FUNCTIONAL_SNP rs10509130 chr10 62121112 Intron 6 35775 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733 FUNCTIONAL_SNP rs7089563 chr10 62109898 Intron 6 24561 CEU:1.0;0.814, CHB:0.881;0.698, JPT:1.0;0.787, YRI:0.95;0.582 FUNCTIONAL_SNP rs7093702 chr10 62093709 Intron 6 8372 CEU:1.0;0.846, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.952;0.739 FUNCTIONAL_SNP rs7084499 chr10 62106882 Intron 6 21545 CEU:1.0;0.817, CHB:0.879;0.693, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs2893830 chr10 62099945 Intron 7 14608 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.952;0.63 FUNCTIONAL_SNP rs10761475 chr10 62061257 Intron 7 24080 CEU:0.903;0.816, CHB:1.0;0.95, JPT:1.0;0.923 FUNCTIONAL_SNP rs2393625 chr10 62119206 Intron 7 33869 CEU:1.0;0.817, CHB:0.883;0.701, JPT:0.911;0.662 FUNCTIONAL_SNP rs4245588 chr10 62101746 Intron 7 16409 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:1.0;0.622 FUNCTIONAL_SNP rs7096250 chr10 62106319 Intron 7 20982 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733 FUNCTIONAL_SNP rs10821727 chr10 62099113 Intron 7 13776 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs4520549 chr10 62104516 Intron 7 19179 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs4290174 chr10 62104583 Intron 7 19246 CEU:1.0;0.808, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs10994310 chr10 62106169 Intron 7 20832 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs2061487 chr10 62102842 Intron 7 17505 CEU:1.0;0.817, CHB:0.876;0.687, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs2061492 chr10 62104016 Intron 7 18679 CEU:1.0;0.81, CHB:0.881;0.698, JPT:1.0;0.638, YRI:0.949;0.594 FUNCTIONAL_SNP rs1340652 chr10 62078203 Intron 7 7134 CEU:1.0;0.952, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.511 FUNCTIONAL_SNP rs7084803 chr10 62107101 Intron 7 21764 CEU:1.0;0.817, CHB:0.877;0.656, JPT:1.0;0.732, YRI:0.952;0.625 FUNCTIONAL_SNP rs10761485 chr10 62102660 Intron 7 17323 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.732, YRI:0.951;0.606 FUNCTIONAL_SNP rs10761488 chr10 62105992 Intron 7 20655 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs4620673 chr10 62104704 Intron 7 19367 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733, YRI:0.951;0.606 FUNCTIONAL_SNP rs4948410 chr10 62116047 Intron 7 30710 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733 FUNCTIONAL_SNP rs4948411 chr10 62116075 Intron 7 30738 CEU:1.0;0.817, CHB:0.883;0.701, JPT:1.0;0.733 FUNCTIONAL_SNP rs1350631 chr10 62082569 Intron 7 2768 CEU:1.0;0.952, CHB:1.0;0.775, JPT:1.0;0.933 LEAD_SNP rs10994336 chr10 62179812 Intron 7 ASSOCIATION 18711365 Bipolar disorder 8.04575749056 ANK3 - ARL4P LEAD_SNP rs10994338 chr10 62181128 Intron 2b ASSOCIATION 20351715 Bipolar disorder and major depressive disorder (combined) 6.30102999566 ANK3 - ARL4P FUNCTIONAL_SNP rs4948418 chr10 62185494 Intron 5b 4366 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10994359 chr10 62222107 Intron 6 40979 CEU:1.0;0.825, CHB:1.0;0.555 FUNCTIONAL_SNP rs10994397 chr10 62279124 Intron 6 97996 CEU:1.0;0.825 FUNCTIONAL_SNP rs10994336 chr10 62179812 Intron 7 1316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1530440 chr10 63524591 Intron 5b ASSOCIATION 19430483 Diastolic blood pressure 9.0 C10orf107 FUNCTIONAL_SNP rs751891 chr10 63541723 Intron 4 17132 CEU:1.0;0.936, CHB:0.927;0.801, JPT:1.0;0.864 FUNCTIONAL_SNP rs7076398 chr10 63533663 Intergenic 7 9072 CEU:1.0;0.936, CHB:0.927;0.801, JPT:1.0;0.864 FUNCTIONAL_SNP rs10509158 chr10 63507669 Intron 7 16922 CEU:0.931;0.812, CHB:0.918;0.728, JPT:1.0;0.864 LEAD_SNP rs10821936 chr10 63723577 Intron 5a ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 15.0 ARID5B FUNCTIONAL_SNP rs7089424 chr10 63752159 Intron 2b 28582 CEU:0.942;0.887, CHB:1.0;0.862, JPT:0.883;0.738 FUNCTIONAL_SNP rs7896246 chr10 63724390 Intron 2b 813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4506592 chr10 63727187 Intron 3a 3610 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;0.892, YRI:1.0;0.617 FUNCTIONAL_SNP rs7090445 chr10 63721176 Intron 4 2401 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs10821937 chr10 63723909 Intron 4 332 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9415635 chr10 63753482 Intron 4 29905 CEU:0.942;0.887, CHB:0.944;0.768, JPT:0.883;0.738 FUNCTIONAL_SNP rs4245597 chr10 63725942 Intron 5b 2365 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs7087507 chr10 63745689 Intron 6 22112 CEU:0.942;0.887, CHB:1.0;0.905, JPT:0.883;0.738 FUNCTIONAL_SNP rs4245595 chr10 63722895 Intron 6 682 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.9 LEAD_SNP rs7089424 chr10 63752159 Intron 2b ASSOCIATION 19684604 Acute lymphoblastic leukemia (childhood) 18.15490196 ARID5B FUNCTIONAL_SNP rs7896246 chr10 63724390 Intron 2b 27769 CEU:0.942;0.887, CHB:1.0;0.862, JPT:0.883;0.738 FUNCTIONAL_SNP rs4506592 chr10 63727187 Intron 3a 24972 CEU:1.0;0.847, CHB:1.0;0.862, JPT:1.0;0.844 FUNCTIONAL_SNP rs7090445 chr10 63721176 Intron 4 30983 CEU:0.942;0.887, CHB:1.0;0.906, JPT:0.831;0.691 FUNCTIONAL_SNP rs10821937 chr10 63723909 Intron 4 28250 CEU:0.942;0.887, CHB:1.0;0.862, JPT:0.883;0.738 FUNCTIONAL_SNP rs9415635 chr10 63753482 Intron 4 1323 CEU:1.0;1.0, CHB:0.951;0.904, JPT:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs10821936 chr10 63723577 Intron 5a 28582 CEU:0.942;0.887, CHB:1.0;0.862, JPT:0.883;0.738 FUNCTIONAL_SNP rs4245597 chr10 63725942 Intron 5b 26217 CEU:1.0;0.945, CHB:1.0;0.862, JPT:0.883;0.738 FUNCTIONAL_SNP rs7087507 chr10 63745689 Intron 6 6470 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.759 FUNCTIONAL_SNP rs4245595 chr10 63722895 Intron 6 29264 CEU:0.942;0.887, CHB:1.0;0.906, JPT:0.883;0.738 LEAD_SNP rs10995190 chr10 64278682 Intron 4 ASSOCIATION 21278746 Mammographic density 9.0 ZNF365 ASSOCIATION 20453838 Breast cancer 14.3010299957 ZNF365 FUNCTIONAL_SNP rs10995195 chr10 64288389 Intron 4 9707 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs10995194 chr10 64288130 Intron 5a 9448 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.717 FUNCTIONAL_SNP rs10995191 chr10 64278874 Intron 6 192 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs4746419 chr10 64275261 Intron 7 3421 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs10995189 chr10 64278181 Intron 7 501 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10995271 chr10 64438486 Intergenic 7 ASSOCIATION 18587394 Crohn's disease 19.3979400087 ZNF365 - ALDH7A1P4 LEAD_SNP rs10761659 chr10 64445564 Intergenic 7 ASSOCIATION 21102463 Crohn's disease 21.3979400087 ZNF365 - ALDH7A1P4 ASSOCIATION 17554300 Crohn's disease 5.69897000434 ZNF365 - ALDH7A1P4 LEAD_SNP rs224136 chr10 64470675 Intergenic 7 ASSOCIATION 17435756 Crohn's disease 10.0 ZNF365 - ALDH7A1P4 LEAD_SNP rs12355784 chr10 65121565 Intron 6 ASSOCIATION 18940312 Plasma levels of liver enzymes 9.30102999566 JMJD1C FUNCTIONAL_SNP rs1935 chr10 64927823 Coding 7 193742 CEU:1.0;0.962, CHB:1.0;0.778, JPT:1.0;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761779 chr10 65274927 Intergenic 2b 153362 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs2163188 chr10 65314711 Intron 2b 193146 CEU:1.0;0.871 FUNCTIONAL_SNP rs10761731 chr10 65027610 Intron 4 93955 CEU:1.0;0.846, CHB:1.0;0.903, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761766 chr10 65190327 Intron 4 68762 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2893919 chr10 65134778 Intron 4 13213 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3740331 chr10 65192288 Intron 4 70723 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs10509189 chr10 65264126 Intergenic 4 142561 CEU:1.0;1.0, CHB:1.0;0.735, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs2393966 chr10 65134814 Intron 4 13249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6479905 chr10 65315231 Intron 5a 193666 CEU:1.0;0.855 FUNCTIONAL_SNP rs7092784 chr10 65214749 Intron 5a 93184 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761784 chr10 65308750 Intron 5a 187185 CEU:1.0;1.0, CHB:1.0;0.712, JPT:1.0;0.885 FUNCTIONAL_SNP rs10761762 chr10 65184717 Intron 5a 63152 CEU:1.0;1.0, CHB:1.0;0.707, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs10822163 chr10 65124098 Intron 5a 2533 CEU:0.909;0.826, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10740118 chr10 65101207 Intron 5a 20358 CEU:0.958;0.815, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7080386 chr10 65048306 Intron 5a 73259 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761756 chr10 65172328 Intron 5b 50763 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10509186 chr10 65207018 Intron 5b 85453 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761771 chr10 65230164 Intergenic 5b 108599 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;0.953 FUNCTIONAL_SNP rs4486511 chr10 65264266 Intergenic 5b 142701 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs10740134 chr10 65315433 Intron 5b 193868 CEU:1.0;1.0, CHB:1.0;0.663, JPT:1.0;0.787, YRI:0.949;0.857 FUNCTIONAL_SNP rs7082470 chr10 65277026 Intergenic 5b 155461 CEU:1.0;0.961, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761741 chr10 65066186 Intron 6 55379 CEU:0.958;0.815, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7910927 chr10 65138910 Intron 6 17345 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6479896 chr10 65126832 Intron 6 5267 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761785 chr10 65318766 Intron 6 197201 CEU:0.958;0.816 FUNCTIONAL_SNP rs7070296 chr10 65070438 Intron 6 51127 CEU:1.0;0.849, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9971352 chr10 65265108 Intergenic 6 143543 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7095571 chr10 65150959 Intron 6 29394 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7075195 chr10 65050659 Intron 6 70906 CEU:1.0;0.843, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;1.0 FUNCTIONAL_SNP rs7920036 chr10 65293860 Intron 6 172295 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7912893 chr10 65162000 Intron 6 40435 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7076310 chr10 65135672 Intron 6 14107 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7085018 chr10 65286667 Intron 6 165102 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761739 chr10 65062008 Intron 7 59557 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761742 chr10 65085048 Intron 7 36517 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7070761 chr10 65317056 Intron 7 195491 CEU:1.0;0.84 FUNCTIONAL_SNP rs7085621 chr10 65208926 Intron 7 87361 CEU:1.0;1.0, CHB:1.0;0.761, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs7919685 chr10 65315800 Intron 7 194235 CEU:1.0;0.852 FUNCTIONAL_SNP rs7909960 chr10 65239177 Intergenic 7 117612 CEU:1.0;1.0, CHB:1.0;0.715, JPT:1.0;0.943, YRI:1.0;1.0 FUNCTIONAL_SNP rs4379723 chr10 64963449 Intron 7 158116 CEU:1.0;0.962, CHB:1.0;0.778, JPT:1.0;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761752 chr10 65160321 Intron 7 38756 CEU:1.0;0.958, CHB:1.0;0.735, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs4454603 chr10 65012750 Intron 7 108815 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7896783 chr10 65162153 Intron 7 40588 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7915779 chr10 65244244 Intergenic 7 122679 CEU:1.0;1.0, CHB:1.0;0.643, JPT:1.0;0.909, YRI:1.0;1.0 FUNCTIONAL_SNP rs7897379 chr10 65301725 Intron 7 180160 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;0.953 FUNCTIONAL_SNP rs7923544 chr10 65182256 Intron 7 60691 CEU:1.0;1.0, CHB:1.0;0.707, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs12247907 chr10 65317045 Intron 7 195480 CEU:1.0;0.852 FUNCTIONAL_SNP rs3999089 chr10 65203808 Intron 7 82243 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2393977 chr10 65247609 Intergenic 7 126044 CEU:1.0;1.0, CHB:1.0;0.778, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2393969 chr10 65140440 Intron 7 18875 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2393986 chr10 65320006 Intron 7 198441 CEU:1.0;1.0, CHB:1.0;0.674, JPT:1.0;0.783, YRI:0.949;0.857 FUNCTIONAL_SNP rs7923609 chr10 65133822 Intron 7 12257 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10740125 chr10 65209609 Intron 7 88044 CEU:1.0;1.0, CHB:1.0;0.761, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10740126 chr10 65210935 Intron 7 89370 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs10740129 chr10 65250808 Intergenic 7 129243 CEU:1.0;1.0, CHB:0.939;0.718, JPT:1.0;0.952, YRI:1.0;0.948 FUNCTIONAL_SNP rs7896518 chr10 65104500 Intron 7 17065 CEU:0.958;0.815, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs2393967 chr10 65133156 Intron 5a ASSOCIATION 19820697 Mean platelet volume 20.5228787453 JMJD1C FUNCTIONAL_SNP rs10733789 chr10 64948684 Intron 5b 184472 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9 FUNCTIONAL_SNP rs2893923 chr10 65261184 Intergenic 6 128028 CEU:1.0;0.956, CHB:1.0;0.723, JPT:1.0;0.855 LEAD_SNP rs2893923 chr10 65261184 Intergenic 6 ASSOCIATION 20526338 Platelet aggregation 7.30102999566 JMJD1C - REEP3 FUNCTIONAL_SNP rs2393967 chr10 65133156 Intron 5a 128028 CEU:1.0;0.956, CHB:1.0;0.723, JPT:1.0;0.855 LEAD_SNP rs10761779 chr10 65274927 Intergenic 2b ASSOCIATION 18940312 Plasma levels of liver enzymes 9.15490195999 JMJD1C - REEP3 FUNCTIONAL_SNP rs2163188 chr10 65314711 Intron 2b 39784 CEU:1.0;0.871 FUNCTIONAL_SNP rs10761766 chr10 65190327 Intron 4 84600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2893919 chr10 65134778 Intron 4 140149 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs10509189 chr10 65264126 Intergenic 4 10801 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3740331 chr10 65192288 Intron 4 82639 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2393966 chr10 65134814 Intron 4 140113 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs6479905 chr10 65315231 Intron 5a 40304 CEU:1.0;0.855 FUNCTIONAL_SNP rs7092784 chr10 65214749 Intron 5a 60178 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761784 chr10 65308750 Intron 5a 33823 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941 FUNCTIONAL_SNP rs10822163 chr10 65124098 Intron 5a 150829 CEU:0.909;0.826, CHB:1.0;0.741, JPT:1.0;0.947, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761762 chr10 65184717 Intron 5a 90210 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10740118 chr10 65101207 Intron 5a 173720 CEU:0.958;0.815, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761756 chr10 65172328 Intron 5b 102599 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs10822186 chr10 65350383 Intron 5b 75456 CEU:1.0;0.889, CHB:1.0;0.909, JPT:1.0;0.822 FUNCTIONAL_SNP rs10761771 chr10 65230164 Intergenic 5b 44763 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs10761786 chr10 65336207 Intron 5b 61280 CEU:1.0;0.889, CHB:1.0;0.867, JPT:1.0;0.822 FUNCTIONAL_SNP rs10509186 chr10 65207018 Intron 5b 67909 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4486511 chr10 65264266 Intergenic 5b 10661 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10740134 chr10 65315433 Intron 5b 40506 CEU:1.0;1.0, CHB:1.0;0.906, JPT:1.0;0.822, YRI:0.949;0.857 FUNCTIONAL_SNP rs7082470 chr10 65277026 Intergenic 5b 2099 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7910927 chr10 65138910 Intron 6 136017 CEU:1.0;0.962, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs6479896 chr10 65126832 Intron 6 148095 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761785 chr10 65318766 Intron 6 43839 CEU:0.958;0.816 FUNCTIONAL_SNP rs9971352 chr10 65265108 Intergenic 6 9819 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12355784 chr10 65121565 Intron 6 153362 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs7095571 chr10 65150959 Intron 6 123968 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7920036 chr10 65293860 Intron 6 18933 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7912893 chr10 65162000 Intron 6 112927 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7076310 chr10 65135672 Intron 6 139255 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs7085018 chr10 65286667 Intron 6 11740 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4746203 chr10 65323997 Intron 6 49070 CEU:1.0;0.818 FUNCTIONAL_SNP rs10761742 chr10 65085048 Intron 7 189879 CEU:1.0;0.959, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs7070761 chr10 65317056 Intron 7 42129 CEU:1.0;0.84 FUNCTIONAL_SNP rs7085621 chr10 65208926 Intron 7 66001 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761787 chr10 65353755 Intron 7 78828 CEU:1.0;0.92, CHB:1.0;0.909, JPT:1.0;0.822 FUNCTIONAL_SNP rs7919685 chr10 65315800 Intron 7 40873 CEU:1.0;0.852 FUNCTIONAL_SNP rs7909960 chr10 65239177 Intergenic 7 35750 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10761752 chr10 65160321 Intron 7 114606 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3999089 chr10 65203808 Intron 7 71119 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7896783 chr10 65162153 Intron 7 112774 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10733793 chr10 65323809 Intron 7 48882 CEU:1.0;0.913, CHB:1.0;0.907, JPT:1.0;0.755, YRI:0.883;0.738 FUNCTIONAL_SNP rs10822182 chr10 65325478 Intron 7 50551 CEU:1.0;0.925, CHB:1.0;0.909, JPT:1.0;0.822, YRI:0.902;0.813 FUNCTIONAL_SNP rs10822184 chr10 65337153 Intron 7 62226 CEU:1.0;0.889, CHB:1.0;0.867, JPT:1.0;0.822 FUNCTIONAL_SNP rs7915779 chr10 65244244 Intergenic 7 30683 CEU:1.0;1.0, CHB:1.0;0.867, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs7897379 chr10 65301725 Intron 7 26798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs7923544 chr10 65182256 Intron 7 92671 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12247907 chr10 65317045 Intron 7 42118 CEU:1.0;0.852 FUNCTIONAL_SNP rs2393969 chr10 65140440 Intron 7 134487 CEU:1.0;0.962, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs2393977 chr10 65247609 Intergenic 7 27318 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2393986 chr10 65320006 Intron 7 45079 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.818, YRI:0.949;0.857 FUNCTIONAL_SNP rs7923609 chr10 65133822 Intron 7 141105 CEU:1.0;0.962, CHB:1.0;0.741, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs10740125 chr10 65209609 Intron 7 65318 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10740126 chr10 65210935 Intron 7 63992 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10740129 chr10 65250808 Intergenic 7 24119 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.948 FUNCTIONAL_SNP rs7896518 chr10 65104500 Intron 7 170427 CEU:0.958;0.815, CHB:1.0;0.741, JPT:0.951;0.904, YRI:1.0;1.0 LEAD_SNP rs7900909 chr10 66448472 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 5.09691001301 RPL17P35 - ANXA2P3 FUNCTIONAL_SNP rs7093406 chr10 66427078 Intergenic 6 21394 CEU:1.0;1.0, CHB:1.0;0.896, JPT:1.0;0.861, YRI:1.0;1.0 FUNCTIONAL_SNP rs12412838 chr10 66435199 Intergenic 6 13273 CEU:1.0;1.0, CHB:1.0;0.892, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs1915601 chr10 66454238 Intergenic 6 5766 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.861, YRI:0.946;0.809 FUNCTIONAL_SNP rs10995964 chr10 66440499 Intergenic 6 7973 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;0.858, YRI:0.944;0.891 FUNCTIONAL_SNP rs10995982 chr10 66453375 Intergenic 6 4903 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.861, YRI:1.0;0.861 FUNCTIONAL_SNP rs11816713 chr10 66452715 Intergenic 7 4243 CEU:1.0;0.899, CHB:1.0;0.946, JPT:1.0;0.861, YRI:1.0;0.949 FUNCTIONAL_SNP rs7895566 chr10 66422746 Intergenic 7 25726 CEU:1.0;1.0, CHB:1.0;0.896, JPT:1.0;0.861, YRI:1.0;1.0 FUNCTIONAL_SNP rs4466713 chr10 66437606 Intergenic 7 10866 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;0.855, YRI:1.0;1.0 FUNCTIONAL_SNP rs4427465 chr10 66437457 Intergenic 7 11015 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.861, YRI:1.0;1.0 LEAD_SNP rs16922827 chr10 68085353 Intron 7 ASSOCIATION 20595579 Longevity 9.0 CTNNA3 FUNCTIONAL_SNP rs12414892 chr10 68081418 Intron 7 3935 CEU:1.0;0.878, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.588 FUNCTIONAL_SNP rs12415478 chr10 68078932 Intron 7 6421 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10762058 chr10 68088508 Intron 7 ASSOCIATION 19187332 Asthma (toluene diisocyanate-induced) 5.22184874962 CTNNA3 LEAD_SNP rs4142041 chr10 68640951 Intron 5a ASSOCIATION 17158188 Nicotine dependence 5.22184874962 CTNNA3 LEAD_SNP rs6480314 chr10 69967447 Intron 7 ASSOCIATION 20395239 Optic disc size (disc) 6.69897000434 MYPN FUNCTIONAL_SNP rs7094934 chr10 69962850 Intron 4 4597 CEU:1.0;0.918, CHB:0.882;0.698, JPT:1.0;0.64 FUNCTIONAL_SNP rs6480316 chr10 69972700 Intergenic 4 5253 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11813170 chr10 69975123 Intergenic 5a 7676 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11813125 chr10 69975033 Intergenic 5a 7586 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11812723 chr10 69974771 Intergenic 5a 7324 CEU:1.0;0.918, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs2166221 chr10 69982298 Intergenic 5b 14851 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1900007 chr10 69977775 Intergenic 5b 10328 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1900009 chr10 69977697 Intergenic 5b 10250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10733840 chr10 69980221 Intergenic 6 12774 CEU:1.0;0.899, CHB:1.0;0.73, JPT:1.0;1.0 FUNCTIONAL_SNP rs17538164 chr10 69975677 Intergenic 6 8230 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2394459 chr10 69981436 Intergenic 6 13989 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10509300 chr10 69960835 Intron 6 6612 CEU:1.0;0.918, CHB:0.892;0.72, JPT:1.0;0.699 FUNCTIONAL_SNP rs3814184 chr10 69966251 Intron 7 1196 CEU:1.0;1.0, CHB:1.0;0.811, JPT:1.0;0.699 FUNCTIONAL_SNP rs7898034 chr10 69977616 Intergenic 7 10169 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.573 FUNCTIONAL_SNP rs10740287 chr10 69973890 Intergenic 7 6443 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7904069 chr10 69980193 Intergenic 7 12746 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2394462 chr10 69981743 Intergenic 7 14296 CEU:1.0;0.847, CHB:1.0;0.832, JPT:1.0;1.0 FUNCTIONAL_SNP rs7071208 chr10 69973107 Intergenic 7 5660 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7916697 chr10 69991853 Exon,non-coding 4 ASSOCIATION 21307088 Optic disc parameters 14.6989700043 ATOH7 FUNCTIONAL_SNP rs1900004 chr10 70000881 Intron 6 9028 CEU:0.929;0.864, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs1900005 chr10 69998055 Intron 7 6202 CEU:0.929;0.864, CHB:1.0;0.953, JPT:1.0;1.0 LEAD_SNP rs1900004 chr10 70000881 Intron 6 ASSOCIATION 20548946 Optic disc parameters 34.5228787453 ATOH7 - PBLD ASSOCIATION 20548946 Vertical cup-disc ratio 7.69897000434 ATOH7 - PBLD FUNCTIONAL_SNP rs7916697 chr10 69991853 Exon,non-coding 4 9028 CEU:0.929;0.864, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs1900005 chr10 69998055 Intron 7 2826 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs3858145 chr10 70011838 Intergenic 2b ASSOCIATION 20395239 Optic disc size (cup) 6.69897000434 ATOH7 - PBLD ASSOCIATION 20395239 Optic disc size (disc) 9.52287874528 ATOH7 - PBLD FUNCTIONAL_SNP rs3858146 chr10 70013250 Intergenic 4 1412 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.775 FUNCTIONAL_SNP rs3858144 chr10 70011354 Intergenic 5b 484 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs10762201 chr10 70040111 Intergenic 6 28273 CEU:0.931;0.812, CHB:0.951;0.905, JPT:1.0;0.72 FUNCTIONAL_SNP rs10762198 chr10 70023053 Intergenic 7 11215 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs12571093 chr10 70019371 Intergenic 7 ASSOCIATION 20395239 Optic disc size (disc) 9.69897000434 ATOH7 - PBLD FUNCTIONAL_SNP rs2241970 chr10 70031067 Intergenic 2b 11696 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2241969 chr10 70031010 Intergenic 2b 11639 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10998046 chr10 70029398 Intergenic 5a 10027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17297418 chr10 70031651 Intergenic 5b 12280 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7079054 chr10 70026161 Intergenic 5b 6790 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3858147 chr10 70013264 Intergenic 5b 6107 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3740588 chr10 70020836 Intergenic 5b 1465 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7078967 chr10 70026321 Intergenic 6 6950 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17297383 chr10 70028863 Intergenic 6 9492 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17231644 chr10 70030058 Intergenic 6 10687 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1007848 chr10 70018306 Intergenic 6 1065 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17231637 chr10 70029894 Intergenic 6 10523 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10998044 chr10 70029265 Intergenic 6 9894 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10998045 chr10 70029383 Intergenic 6 10012 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4403687 chr10 70028052 Intergenic 6 8681 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2120902 chr10 70020222 Intergenic 7 851 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17231630 chr10 70028717 Intergenic 7 9346 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12572954 chr10 70030523 Intergenic 7 11152 CEU:1.0;1.0, CHB:1.0;0.896, JPT:1.0;1.0 FUNCTIONAL_SNP rs12572960 chr10 70030723 Intergenic 7 11352 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2017305 chr10 70712062 Intergenic 6 ASSOCIATION 20800221 Depression--quantitative trait 5.04575749056 DDX50 - DDX21 FUNCTIONAL_SNP rs1539163 chr10 70739630 Intron 4 27568 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs2487710 chr10 70782126 Intergenic 6 70064 CEU:1.0;0.814, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12266901 chr10 70783522 Intergenic 7 71460 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12244293 chr10 70783580 Intergenic 7 71518 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3740596 chr10 70674178 Intron 7 37884 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17471932 chr10 70751024 Intron 7 38962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs12250707 chr10 70779436 Intergenic 7 67374 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs16926246 chr10 71093392 Intron 4 ASSOCIATION 20858683 Glycated hemoglobin levels 53.5228787453 HK1 ASSOCIATION 19862010 Hematocrit 13.0 HK1 ASSOCIATION 19862010 Hemoglobin 10.6989700043 HK1 FUNCTIONAL_SNP rs16926249 chr10 71100726 Intron 4 7334 CEU:0.905;0.818, YRI:1.0;0.745 FUNCTIONAL_SNP rs10159477 chr10 71099888 Intron 4 6496 CEU:0.905;0.818, YRI:1.0;0.745 LEAD_SNP rs7072268 chr10 71099913 Intron 3a ASSOCIATION 19096518 Glycated hemoglobin levels 24.6989700043 HK1 FUNCTIONAL_SNP rs7912524 chr10 71098295 Intron 4 1618 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.917 FUNCTIONAL_SNP rs6480403 chr10 71099986 Intron 5a 73 CEU:1.0;0.843, YRI:0.95;0.702 FUNCTIONAL_SNP rs10998730 chr10 71100782 Intron 5b 869 CEU:0.959;0.919, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.914 LEAD_SNP rs7077164 chr10 71583198 Intron 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 5.15490195999 COL13A1 FUNCTIONAL_SNP rs1227769 chr10 71586296 Intron 6 3098 CEU:0.954;0.909, CHB:1.0;0.869, JPT:1.0;0.907, YRI:0.958;0.737 FUNCTIONAL_SNP rs1227775 chr10 71580862 Intron 6 2336 CEU:0.952;0.827, CHB:1.0;0.869, JPT:1.0;0.907 FUNCTIONAL_SNP rs1227776 chr10 71580893 Intron 7 2305 CEU:1.0;0.954, CHB:1.0;0.864, JPT:1.0;0.895, YRI:1.0;0.572 FUNCTIONAL_SNP rs1227777 chr10 71581131 Intron 7 2067 CEU:0.907;0.822, CHB:1.0;0.869, JPT:1.0;0.904 FUNCTIONAL_SNP rs1227764 chr10 71583223 Intron 7 25 CEU:1.0;0.948, CHB:1.0;0.857, JPT:1.0;0.891, YRI:0.945;0.683 LEAD_SNP rs1227756 chr10 71588504 Intron 2b ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 6.69897000434 COL13A1 FUNCTIONAL_SNP rs1227753 chr10 71587887 Intron 2b 617 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs1227758 chr10 71589988 Intron 5b 1484 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.954;0.694 LEAD_SNP rs10999409 chr10 72332440 Intergenic 5b ASSOCIATION 19553259 Obesity (extreme) 5.30102999566 KIAA1274 - PRF1 FUNCTIONAL_SNP rs10762393 chr10 72331540 Intergenic 5b 900 CEU:1.0;0.961, CHB:1.0;0.529, JPT:0.817;0.667, YRI:1.0;0.875 FUNCTIONAL_SNP rs12252548 chr10 72330526 Intergenic 7 1914 CEU:1.0;0.854, CHB:1.0;0.517, JPT:0.794;0.559 FUNCTIONAL_SNP rs4746054 chr10 72331358 Intergenic 7 1082 CEU:1.0;0.957 FUNCTIONAL_SNP rs10823575 chr10 72333257 Intergenic 7 817 CEU:1.0;0.855 FUNCTIONAL_SNP rs7081852 chr10 72333944 Intergenic 7 1504 CEU:1.0;0.855 LEAD_SNP rs1816002 chr10 72483010 Intron 5b ASSOCIATION 19851299 Weight 5.09691001301 ADAMTS14 LEAD_SNP rs16928529 chr10 72982985 Intron 5b ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.39794000867 UNC5B LEAD_SNP rs1245541 chr10 73849639 Intergenic 4 ASSOCIATION 21216879 Insulin-like growth factors 6.30102999566 SPOCK2 FUNCTIONAL_SNP rs3312 chr10 73856984 Exon,non-coding 7 7345 CEU:1.0;0.819, JPT:1.0;0.507 FUNCTIONAL_SNP rs1245540 chr10 73849752 Intergenic 2b 113 CEU:1.0;0.852, JPT:1.0;0.563 FUNCTIONAL_SNP rs751835 chr10 73847739 Intron 3a 1900 CEU:0.956;0.808 FUNCTIONAL_SNP rs921361 chr10 73867454 Intron 4 17815 CEU:1.0;0.961, CHB:1.0;0.797, JPT:1.0;1.0, YRI:1.0;0.514 FUNCTIONAL_SNP rs1245542 chr10 73849531 Intergenic 4 108 CEU:1.0;0.915, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1245548 chr10 73845884 Intron 4 3755 CEU:1.0;0.852, JPT:1.0;0.536 FUNCTIONAL_SNP rs1245543 chr10 73849472 Intergenic 5b 167 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2394851 chr10 73853655 Intergenic 7 4016 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7919006 chr10 76808760 Intron 4 ASSOCIATION 19851299 Weight 5.39794000867 DUPD1 FUNCTIONAL_SNP rs16931938 chr10 76803567 Coding 5b 5193 CEU:1.0;1.0, CHB:1.0;0.897, JPT:0.932;0.767 FUNCTIONAL_SNP rs4589232 chr10 76785448 Exon,non-coding 7 23312 CEU:1.0;0.848 FUNCTIONAL_SNP rs12255305 chr10 76794788 Intergenic 4 13972 CEU:1.0;0.848 FUNCTIONAL_SNP rs6480766 chr10 76803880 Intron 4 4880 CEU:1.0;1.0, CHB:1.0;0.898, JPT:0.936;0.875 FUNCTIONAL_SNP rs7901279 chr10 76804588 Intron 5b 4172 CEU:1.0;0.848 FUNCTIONAL_SNP rs12249049 chr10 76786047 Intron 6 22713 CEU:1.0;0.848 FUNCTIONAL_SNP rs11816422 chr10 76765477 Intron 6 43283 CEU:1.0;0.848 FUNCTIONAL_SNP rs7901229 chr10 76804824 Intron 7 3936 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.939 FUNCTIONAL_SNP rs16931904 chr10 76750756 Intron 7 58004 CEU:1.0;0.848 FUNCTIONAL_SNP rs11813191 chr10 76750091 Intron 7 58669 CEU:1.0;0.848 FUNCTIONAL_SNP rs2395126 chr10 76768023 Intron 7 40737 CEU:1.0;0.848 FUNCTIONAL_SNP rs2395127 chr10 76772778 Intron 7 35982 CEU:1.0;1.0, CHB:0.944;0.844, JPT:0.931;0.765 LEAD_SNP rs2116830 chr10 78646536 Exon,non-coding 7 ASSOCIATION 21708048 Obesity 9.52287874528 KCNMA1 FUNCTIONAL_SNP rs3781139 chr10 78647986 Exon,non-coding 7 1450 CEU:1.0;0.946 FUNCTIONAL_SNP rs11001919 chr10 78648972 Intron 7 2436 CEU:1.0;1.0 LEAD_SNP rs4979906 chr10 79444753 Intergenic 6 ASSOCIATION 20400778 Mortality among heart failure patients 5.15490195999 KCNMA1 - IMPDH1P5 FUNCTIONAL_SNP rs11002247 chr10 79446901 Intergenic 3a 2148 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.823, YRI:1.0;0.795 FUNCTIONAL_SNP rs11002241 chr10 79445327 Intergenic 4 574 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11002248 chr10 79446961 Intergenic 4 2208 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.815, YRI:1.0;0.772 FUNCTIONAL_SNP rs11002243 chr10 79446083 Intergenic 4 1330 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11002249 chr10 79447228 Intergenic 5a 2475 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.815 FUNCTIONAL_SNP rs11002239 chr10 79443836 Intergenic 5a 917 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11002244 chr10 79446207 Intergenic 5b 1454 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1609790 chr10 79464078 Intergenic 5b 19325 CEU:1.0;0.862, CHB:1.0;0.868, JPT:1.0;0.823 FUNCTIONAL_SNP rs7086586 chr10 79459524 Intergenic 6 14771 CEU:1.0;0.862, CHB:1.0;0.868, JPT:1.0;0.823, YRI:1.0;0.622 FUNCTIONAL_SNP rs7923587 chr10 79453218 Intergenic 7 8465 CEU:1.0;1.0, CHB:0.947;0.815, JPT:1.0;0.823, YRI:1.0;0.795 FUNCTIONAL_SNP rs2048787 chr10 79462793 Intergenic 7 18040 CEU:1.0;0.862, CHB:1.0;0.868, JPT:1.0;0.823 FUNCTIONAL_SNP rs7098023 chr10 79449665 Intergenic 7 4912 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;0.823, YRI:1.0;0.962 FUNCTIONAL_SNP rs12264636 chr10 79448539 Intergenic 7 3786 CEU:1.0;0.862, CHB:1.0;0.908, JPT:1.0;0.823 FUNCTIONAL_SNP rs4979913 chr10 79465171 Intergenic 7 20418 CEU:1.0;0.853, CHB:1.0;0.865, JPT:1.0;0.813 FUNCTIONAL_SNP rs4979786 chr10 79444965 Intergenic 7 212 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7070550 chr10 79459419 Intergenic 7 14666 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;0.823, YRI:0.923;0.821 FUNCTIONAL_SNP rs2395494 chr10 79458340 Intergenic 7 13587 CEU:1.0;0.862, CHB:0.947;0.815, JPT:1.0;0.823, YRI:1.0;0.622 FUNCTIONAL_SNP rs11813624 chr10 79453162 Intergenic 7 8409 CEU:1.0;0.862, CHB:0.947;0.815, JPT:1.0;0.818 LEAD_SNP rs2395528 chr10 80100861 Intergenic 7 ASSOCIATION 18846501 Conduct disorder (interaction) 5.22184874962 LOC100132987 FUNCTIONAL_SNP rs890687 chr10 80109219 Intergenic 5b 8358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs4598621 chr10 80101868 Intergenic 5b 1007 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 LEAD_SNP rs704010 chr10 80841148 Intron 2b ASSOCIATION 20453838 Breast cancer 8.39794000867 ZMIZ1 FUNCTIONAL_SNP rs1250003 chr10 80846814 Intron 4 5666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10762844 chr10 80855423 Intron 4 14275 CEU:1.0;0.882 FUNCTIONAL_SNP rs873823 chr10 80852602 Intron 4 11454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs1250009 chr10 80845411 Intron 5b 4263 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1250000 chr10 80849336 Intron 5b 8188 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1250005 chr10 80846608 Intron 5b 5460 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs719338 chr10 80851257 Intron 5b 10109 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;0.876 FUNCTIONAL_SNP rs754416 chr10 80852768 Intron 5b 11620 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.861, YRI:1.0;1.0 LEAD_SNP rs703965 chr10 80955067 Intron 4 ASSOCIATION 18711365 Bipolar disorder 5.09691001301 ZMIZ1 LEAD_SNP rs11593576 chr10 81015896 Intron 5b ASSOCIATION 20526339 Vitiligo 6.09691001301 ZMIZ1 LEAD_SNP rs1250540 chr10 81036007 Intron 4 ASSOCIATION 19525953 Multiple sclerosis 5.69897000434 ZMIZ1 FUNCTIONAL_SNP rs1250542 chr10 81034670 Intron 2b 1337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1250544 chr10 81032885 Intron 5b 3122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;1.0 FUNCTIONAL_SNP rs1250546 chr10 81032532 Intron 5b 3475 CEU:1.0;0.82, CHB:1.0;0.951, JPT:1.0;0.937, YRI:1.0;0.838 FUNCTIONAL_SNP rs1250538 chr10 81037800 Intron 5b 1793 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1250552 chr10 81058027 Intron 5b ASSOCIATION 20190752 Celiac disease 9.04575749056 ZMIZ1 FUNCTIONAL_SNP rs1250549 chr10 81060474 Intron 5b 2447 CEU:0.959;0.85, CHB:1.0;1.0, JPT:1.0;0.948, YRI:0.904;0.662 LEAD_SNP rs1250550 chr10 81060317 Intron 5b ASSOCIATION 21102463 Crohn's disease 30.0 ZMIZ1 ASSOCIATION 19915574 Inflammatory bowel disease (early onset) 8.22184874962 ZMIZ1 FUNCTIONAL_SNP rs1250551 chr10 81059335 Intron 2b 982 CEU:1.0;0.953, CHB:1.0;0.947, JPT:1.0;0.507, YRI:1.0;0.801 FUNCTIONAL_SNP rs1250556 chr10 81066577 Intron 4 6260 CEU:0.952;0.827, CHB:1.0;0.904, JPT:1.0;0.95 FUNCTIONAL_SNP rs1782648 chr10 81060829 Intron 5b 512 CEU:0.951;0.863, CHB:1.0;0.939, JPT:1.0;1.0 LEAD_SNP rs2145998 chr10 81121696 Intergenic 5b ASSOCIATION 20881960 Height 12.3979400087 PPIF - ZCCHC24 FUNCTIONAL_SNP rs7332 chr10 81114060 Exon,non-coding 4 7636 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6480931 chr10 81108482 Intron 2b 13214 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs941873 chr10 81139462 Intergenic 4 17766 CEU:0.96;0.887, CHB:1.0;0.949, JPT:0.94;0.756, YRI:1.0;0.783 FUNCTIONAL_SNP rs1923366 chr10 81132851 Intergenic 5b 11155 CEU:0.96;0.922, CHB:1.0;0.947, JPT:1.0;1.0 FUNCTIONAL_SNP rs1923367 chr10 81132829 Intergenic 5b 11133 CEU:0.96;0.921, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs1483733 chr10 81130036 Intergenic 5b 8340 CEU:1.0;1.0, CHB:1.0;0.899, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2181080 chr10 81121960 Intergenic 5b 264 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1892498 chr10 81103862 Intergenic 7 17834 CEU:0.957;0.814, CHB:1.0;0.948, JPT:1.0;0.948 FUNCTIONAL_SNP rs4246944 chr10 81105684 Intergenic 7 16012 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.948, YRI:0.948;0.553 LEAD_SNP rs1484170 chr10 82699491 Intergenic 7 ASSOCIATION 21348951 Cardiac hypertrophy 6.0 RPS7P9 - NRG3 FUNCTIONAL_SNP rs10882369 chr10 82698825 Intergenic 4 666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12256202 chr10 82676862 Intergenic 6 22629 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs7078742 chr10 82703101 Intergenic 6 3610 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7902968 chr10 82682250 Intergenic 6 17241 CEU:1.0;0.933 FUNCTIONAL_SNP rs11818147 chr10 82678068 Intergenic 7 21423 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.891;0.754 FUNCTIONAL_SNP rs12767239 chr10 82686928 Intergenic 7 12563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs1484169 chr10 82699221 Intergenic 7 270 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7097847 chr10 82680504 Intergenic 7 18987 CEU:1.0;1.0 FUNCTIONAL_SNP rs7903933 chr10 82682231 Intergenic 7 17260 CEU:1.0;1.0 LEAD_SNP rs588517 chr10 83153246 Intergenic 7 ASSOCIATION 20009918 Carotid atherosclerosis in HIV infection 5.09691001301 RPS7P9 - NRG3 FUNCTIONAL_SNP rs265473 chr10 83147040 Intergenic 6 6206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1999110 chr10 83178570 Intergenic 6 25324 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs675734 chr10 83121112 Intergenic 6 32134 CEU:1.0;0.827, YRI:1.0;1.0 FUNCTIONAL_SNP rs265502 chr10 83142270 Intergenic 6 10976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1329207 chr10 83163381 Intergenic 6 10135 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs587973 chr10 83124784 Intergenic 6 28462 CEU:1.0;0.827, CHB:1.0;0.551, JPT:1.0;0.659, YRI:1.0;1.0 FUNCTIONAL_SNP rs10732784 chr10 83182274 Intergenic 6 29028 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs183827 chr10 83108409 Intergenic 7 44837 CEU:1.0;0.827, YRI:1.0;1.0 FUNCTIONAL_SNP rs10786453 chr10 83167858 Intergenic 7 14612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs265499 chr10 83144287 Intergenic 7 8959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs265501 chr10 83143065 Intergenic 7 10181 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs265508 chr10 83139922 Intergenic 7 13324 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10786438 chr10 83157102 Intergenic 7 3856 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs265511 chr10 83104421 Intergenic 7 48825 CEU:1.0;0.827, YRI:1.0;1.0 FUNCTIONAL_SNP rs10748745 chr10 83162099 Intergenic 7 8853 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs510550 chr10 83127985 Intergenic 7 25261 CEU:1.0;0.827, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1576305 chr10 83172809 Intergenic 7 19563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs265458 chr10 83134494 Intergenic 7 18752 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs587253 chr10 83153472 Intergenic 7 226 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1854463 chr10 83131664 Intergenic 7 21582 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4933824 chr10 83819125 Intron 7 ASSOCIATION 18521091 Response to iloperidone treatment (QT prolongation) 5.69897000434 NRG3 LEAD_SNP rs2224865 chr10 85422854 Intergenic 5b ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 5.04575749056 NRG3 - GHITM FUNCTIONAL_SNP rs944945 chr10 85407876 Intergenic 5b 14978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.859 FUNCTIONAL_SNP rs10749395 chr10 85398017 Intergenic 6 24837 CEU:1.0;0.883, CHB:1.0;0.616, JPT:1.0;0.535 FUNCTIONAL_SNP rs1029134 chr10 85423938 Intergenic 7 1084 CEU:0.956;0.841, CHB:0.946;0.849, JPT:0.833;0.629 FUNCTIONAL_SNP rs10886841 chr10 85404814 Intergenic 7 18040 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.859 LEAD_SNP rs7910620 chr10 87846959 Intron 7 ASSOCIATION 19584346 Cardiac structure and function 6.15490195999 GRID1 FUNCTIONAL_SNP rs11816483 chr10 87850677 Intron 5a 3718 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.861;0.653 LEAD_SNP rs9664222 chr10 89338633 Intergenic 3a ASSOCIATION 20304771 Longevity 6.15490195999 MINPP1 - RPS26P38 LEAD_SNP rs10887741 chr10 89443310 Intron 5a ASSOCIATION 19727025 Exercise (leisure time) 5.39794000867 PAPSS2 FUNCTIONAL_SNP rs2145818 chr10 89418988 Exon,non-coding 4 24322 CEU:0.956;0.841, CHB:0.94;0.667, YRI:1.0;0.927 FUNCTIONAL_SNP rs2145819 chr10 89418979 Exon,non-coding 4 24331 CEU:0.958;0.847, CHB:0.94;0.667, YRI:1.0;0.931 FUNCTIONAL_SNP rs2762527 chr10 89418167 Intron 4 25143 CEU:0.957;0.811, CHB:0.902;0.814, JPT:0.93;0.585, YRI:1.0;0.931 FUNCTIONAL_SNP rs2755425 chr10 89418253 Intron 4 25057 CEU:0.957;0.811, CHB:0.902;0.814, JPT:0.927;0.576, YRI:1.0;0.931 FUNCTIONAL_SNP rs2077695 chr10 89435483 Intron 5a 7827 CEU:1.0;0.961, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs1980647 chr10 89422287 Intron 5b 21023 CEU:1.0;0.961, CHB:1.0;0.687, YRI:1.0;0.55 FUNCTIONAL_SNP rs7085195 chr10 89429897 Intron 7 13413 CEU:1.0;0.96, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12412482 chr10 89443799 Intron 7 489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 LEAD_SNP rs10509540 chr10 90023033 Intergenic 3a ASSOCIATION 19430480 Type 1 diabetes 28.0 RPL11P3 - RNLS FUNCTIONAL_SNP rs166976 chr10 90024599 Intergenic 7 1566 CEU:1.0;0.908, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;1.0 LEAD_SNP rs1926203 chr10 90727334 Intron 7 ASSOCIATION 19654303 Lung cancer 6.0 ACTA2 LEAD_SNP rs2234978 chr10 90771829 Coding 6 ASSOCIATION 20694011 Immunoglobulin A 5.22184874962 FAS FUNCTIONAL_SNP rs4934435 chr10 90776396 Intergenic 5a 4567 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1926188 chr10 90777111 Intergenic 6 5282 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.584 FUNCTIONAL_SNP rs1800623 chr10 90776083 Intergenic 6 4254 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7092857 chr10 90779318 Intergenic 6 7489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1571020 chr10 90770852 Intron 7 977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2147419 chr10 90759916 Intron 7 11913 CEU:1.0;0.911, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs2031613 chr10 90766924 Intron 7 4905 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.533 LEAD_SNP rs1937332 chr10 90826779 Intergenic 7 ASSOCIATION 21041692 Atrioventricular conduction 6.15490195999 FAS - CH25H FUNCTIONAL_SNP rs7920888 chr10 90818377 Intergenic 6 8402 CEU:1.0;1.0, CHB:1.0;0.585, JPT:1.0;0.844 FUNCTIONAL_SNP rs7918678 chr10 90829879 Intergenic 7 3100 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942, YRI:1.0;0.961 FUNCTIONAL_SNP rs1937333 chr10 90826547 Intergenic 7 232 CEU:1.0;0.962, JPT:1.0;0.543, YRI:1.0;0.962 FUNCTIONAL_SNP rs1937334 chr10 90826252 Intergenic 7 527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs11203032 chr10 90964614 Intergenic 2b ASSOCIATION 20445134 Heart failure 5.09691001301 FAS - CH25H FUNCTIONAL_SNP rs10887921 chr10 90925667 Intergenic 3a 38947 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs4417181 chr10 90967093 Intergenic 4 2479 CEU:1.0;0.815, CHB:1.0;0.915, JPT:1.0;1.0 FUNCTIONAL_SNP rs7076185 chr10 90923524 Intergenic 4 41090 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.818 FUNCTIONAL_SNP rs9651424 chr10 90932935 Intergenic 4 31679 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs7477966 chr10 90924258 Intergenic 5a 40356 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.878 FUNCTIONAL_SNP rs10887924 chr10 90937247 Intergenic 5a 27367 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.818 FUNCTIONAL_SNP rs17117088 chr10 90961799 Intergenic 5b 2815 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.938 FUNCTIONAL_SNP rs11203033 chr10 90964731 Intergenic 5b 117 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17117126 chr10 90964026 Intergenic 5b 588 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9651495 chr10 90932381 Intergenic 5b 32233 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.818 FUNCTIONAL_SNP rs17117124 chr10 90963997 Intergenic 5b 617 CEU:1.0;0.9, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs11203011 chr10 90931178 Intergenic 5b 33436 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs11203031 chr10 90964395 Intergenic 5b 219 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7098394 chr10 90960906 Intergenic 6 3708 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3802658 chr10 90965691 Intergenic 6 1077 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2902445 chr10 90934154 Intergenic 6 30460 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.818 FUNCTIONAL_SNP rs4074851 chr10 90958618 Intergenic 6 5996 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12250945 chr10 90935206 Intergenic 7 29408 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs10788635 chr10 90927063 Intergenic 7 37551 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.818 FUNCTIONAL_SNP rs10788638 chr10 90950683 Intergenic 7 13931 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.871 FUNCTIONAL_SNP rs12217507 chr10 90922828 Intergenic 7 41786 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.878 FUNCTIONAL_SNP rs10887920 chr10 90924415 Intergenic 7 40199 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.82 FUNCTIONAL_SNP rs11203009 chr10 90927163 Intergenic 7 37451 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.878 FUNCTIONAL_SNP rs7902290 chr10 90931602 Intergenic 7 33012 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.81 LEAD_SNP rs1412444 chr10 91002927 Intron 6 ASSOCIATION 21606135 Coronary heart disease 7.39794000867 LIPA ASSOCIATION 21378988 Coronary heart disease 12.5228787453 LIPA FUNCTIONAL_SNP rs1332327 chr10 91011681 Exon,non-coding 2b 8754 CEU:1.0;0.824, CHB:0.946;0.81, JPT:0.83;0.594 FUNCTIONAL_SNP rs2246833 chr10 91005854 Intron 2b 2927 CEU:1.0;0.957, CHB:1.0;0.862, JPT:1.0;0.868, YRI:1.0;0.964 FUNCTIONAL_SNP rs2250644 chr10 91008879 Intron 5b 5952 CEU:0.955;0.912, CHB:0.944;0.805, JPT:1.0;0.812, YRI:0.963;0.928 FUNCTIONAL_SNP rs2246941 chr10 91004916 Intron 7 1989 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs2246942 chr10 91004886 Intron 7 1959 CEU:1.0;0.908, CHB:1.0;0.862, JPT:1.0;0.915, YRI:1.0;0.962 LEAD_SNP rs11185790 chr10 91372533 Intron 7 ASSOCIATION 19060910 Other metabolic traits 6.52287874528 PANK1 FUNCTIONAL_SNP rs11185799 chr10 91377466 Intron 4 4933 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11185792 chr10 91374967 Intron 7 2434 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.908, YRI:1.0;1.0 FUNCTIONAL_SNP rs11185793 chr10 91375224 Intron 7 2691 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs11185804 chr10 91379093 Intron 7 6560 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.908, YRI:1.0;1.0 FUNCTIONAL_SNP rs1075374 chr10 91376975 Intron 7 4442 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10881610 chr10 91374833 Intron 7 2300 CEU:1.0;1.0, CHB:1.0;0.953, JPT:0.944;0.804, YRI:1.0;1.0 FUNCTIONAL_SNP rs11185809 chr10 91381231 Intron 7 8698 CEU:0.927;0.859, CHB:0.938;0.88, JPT:0.942;0.887, YRI:1.0;1.0 FUNCTIONAL_SNP rs11185791 chr10 91374955 Intron 7 2422 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs1329650 chr10 93348120 Intergenic 4 ASSOCIATION 20418890 Smoking behavior 9.22184874962 RPS27P1 - PPP1R3C FUNCTIONAL_SNP rs4933206 chr10 93338600 Intergenic 6 9520 CEU:1.0;1.0, CHB:1.0;0.699, JPT:0.929;0.808, YRI:1.0;1.0 LEAD_SNP rs6583826 chr10 94347830 Intergenic 7 ASSOCIATION 21490949 Type 2 diabetes 5.15490195999 IDE - KIF11 LEAD_SNP rs1111875 chr10 94462882 Intergenic 5b ASSOCIATION 19401414 Type 2 diabetes 11.15490196 HHEX - EXOC6 ASSOCIATION 17463246 Type 2 diabetes 9.22184874962 HHEX - EXOC6 ASSOCIATION 17463248 Type 2 diabetes 9.22184874962 HHEX - EXOC6 ASSOCIATION 17293876 Type 2 diabetes 5.52287874528 HHEX - EXOC6 FUNCTIONAL_SNP rs10882099 chr10 94460650 Intergenic 5b 2232 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs5015480 chr10 94465559 Intergenic 7 ASSOCIATION 20862305 Type 2 diabetes 5.04575749056 HHEX - EXOC6 ASSOCIATION 20581827 Type 2 diabetes 15.0 HHEX - EXOC6 ASSOCIATION 18372903 Type 2 diabetes 7.15490195999 HHEX - EXOC6 ASSOCIATION 17463249 Type 2 diabetes 5.30102999566 HHEX - EXOC6 FUNCTIONAL_SNP rs10882101 chr10 94462427 Intergenic 5a 3132 CEU:1.0;1.0, CHB:1.0;0.569, YRI:0.959;0.765 FUNCTIONAL_SNP rs10882099 chr10 94460650 Intergenic 5b 4909 CEU:1.0;1.0, CHB:1.0;0.569 FUNCTIONAL_SNP rs1111875 chr10 94462882 Intergenic 5b 2677 CEU:1.0;1.0, CHB:1.0;0.569 FUNCTIONAL_SNP rs10882102 chr10 94466495 Intergenic 7 936 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs12778642 chr10 94464307 Intergenic 7 1252 CEU:1.0;0.888, YRI:0.957;0.709 LEAD_SNP rs2497306 chr10 94485211 Intergenic 7 ASSOCIATION 21533175 Serum dehydroepiandrosterone sulphate levels 8.30102999566 HHEX - EXOC6 FUNCTIONAL_SNP rs2488075 chr10 94490174 Intergenic 7 4963 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2497304 chr10 94492716 Intergenic 7 7505 CEU:1.0;0.889, CHB:0.838;0.607, JPT:1.0;0.641, YRI:1.0;0.633 LEAD_SNP rs9419788 chr10 96013705 Intron 7 ASSOCIATION 21368711 Personality dimensions 7.39794000867 PLCE1 FUNCTIONAL_SNP rs816278 chr10 96117560 Exon,non-coding 7 103855 CEU:0.958;0.847, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs2860749 chr10 95985995 Intron 5a 27710 CEU:0.959;0.884 FUNCTIONAL_SNP rs2860750 chr10 95973747 Intron 5b 39958 CEU:0.914;0.802 FUNCTIONAL_SNP rs3736901 chr10 96044734 Intron 6 31029 CEU:0.959;0.884, CHB:1.0;1.0, JPT:1.0;0.945 FUNCTIONAL_SNP rs7910752 chr10 96032168 Intron 6 18463 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.701 FUNCTIONAL_SNP rs11187825 chr10 95987313 Intron 6 26392 CEU:0.917;0.808 FUNCTIONAL_SNP rs7069316 chr10 96000282 Intron 7 13423 CEU:1.0;0.96, YRI:1.0;0.573 FUNCTIONAL_SNP rs3980310 chr10 95982015 Intron 7 31690 CEU:1.0;0.961 FUNCTIONAL_SNP rs4113810 chr10 95977775 Intron 7 35930 CEU:0.917;0.808 FUNCTIONAL_SNP rs9325467 chr10 95991336 Intron 7 22369 CEU:0.917;0.808 FUNCTIONAL_SNP rs10882407 chr10 95977011 Intron 7 36694 CEU:0.959;0.884 FUNCTIONAL_SNP rs1547643 chr10 96011865 Intron 7 1840 CEU:1.0;1.0, YRI:1.0;0.601 LEAD_SNP rs11187837 chr10 96035980 Intron 7 ASSOCIATION 21658281 Sudden cardiac arrest 6.39794000867 PLCE1 FUNCTIONAL_SNP rs3740360 chr10 96025491 Intron 7 10489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17109875 chr10 96026575 Intron 7 9405 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3765524 chr10 96058298 Coding 7 ASSOCIATION 20729852 Esophageal cancer and gastric cancer 8.69897000434 PLCE1 FUNCTIONAL_SNP rs7085378 chr10 96109325 Intron 4 51027 CEU:1.0;1.0, CHB:0.938;0.83, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs6583937 chr10 96083452 Intron 6 25154 CEU:1.0;1.0, CHB:1.0;0.891, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs3781265 chr10 96063279 Intron 6 4981 CEU:1.0;0.823, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.895 FUNCTIONAL_SNP rs7084339 chr10 96043732 Intron 7 14566 CEU:1.0;0.82, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs7084988 chr10 96108842 Intron 7 50544 CEU:1.0;1.0, CHB:0.938;0.83, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs12263737 chr10 96044913 Intron 7 13385 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7099485 chr10 96065694 Intron 7 7396 CEU:1.0;0.822, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.862 FUNCTIONAL_SNP rs10882416 chr10 96045054 Intron 7 13244 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2274223 chr10 96066341 Coding 3a ASSOCIATION 21642993 Esophageal cancer 19.3979400087 PLCE1 LEAD_SNP rs3781264 chr10 96070375 Intron 4 ASSOCIATION 20729852 Esophageal cancer and gastric cancer 8.39794000867 PLCE1 FUNCTIONAL_SNP rs12781451 chr10 96083920 Intron 6 13545 CEU:1.0;0.813, CHB:1.0;0.857, JPT:1.0;1.0, YRI:0.943;0.889 LEAD_SNP rs12772169 chr10 96405329 Intergenic 5b ASSOCIATION 19578179 Acenocoumarol maintenance dosage 11.096910013 HELLS - CYP2C18 FUNCTIONAL_SNP rs1998591 chr10 96407978 Intergenic 5a 2649 CEU:1.0;1.0, CHB:1.0;0.852, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs2104543 chr10 96429971 Intergenic 6 24642 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.6 FUNCTIONAL_SNP rs2901783 chr10 96453099 Intron 6 47770 CEU:1.0;1.0, CHB:1.0;0.852, JPT:1.0;0.859, YRI:1.0;0.626 FUNCTIONAL_SNP rs1326837 chr10 96386206 Intergenic 7 19123 CEU:1.0;1.0, CHB:1.0;0.852, JPT:1.0;0.863, YRI:1.0;1.0 FUNCTIONAL_SNP rs4362080 chr10 96537389 Intron 7 132060 CEU:1.0;1.0, CHB:1.0;0.829, JPT:1.0;0.769, YRI:1.0;0.646 FUNCTIONAL_SNP rs7915414 chr10 96599510 Intron 7 194181 CEU:1.0;1.0, CHB:1.0;0.852, JPT:1.0;0.863, YRI:1.0;0.626 FUNCTIONAL_SNP rs12762067 chr10 96398333 Intergenic 7 6996 CEU:1.0;1.0, CHB:1.0;0.852, JPT:1.0;0.858, YRI:1.0;0.929 LEAD_SNP rs12777823 chr10 96405502 Intergenic 5b ASSOCIATION 19706858 Response to clopidogrel therapy 12.6989700043 HELLS - CYP2C18 FUNCTIONAL_SNP rs2281891 chr10 96493058 Coding 7 87556 CEU:1.0;0.862, CHB:1.0;0.885, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs4244285 chr10 96541616 Coding 6 136114 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.509 FUNCTIONAL_SNP rs3758580 chr10 96602622 Coding 7 197120 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs1042192 chr10 96495284 Exon,non-coding 7 89782 CEU:1.0;0.862, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs1042194 chr10 96495484 Exon,non-coding 6 89982 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs4986894 chr10 96522365 Intron 4 116863 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs12774450 chr10 96401654 Intergenic 4 3848 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.55 FUNCTIONAL_SNP rs12765793 chr10 96413072 Intergenic 5b 7570 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.942;0.759 FUNCTIONAL_SNP rs35390752 chr10 96543823 Intron 6 138321 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs4641393 chr10 96567386 Intron 6 161884 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs12778026 chr10 96536227 Intron 6 130725 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.664 FUNCTIONAL_SNP rs717238 chr10 96441300 Intergenic 6 35798 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs7085890 chr10 96468119 Intron 6 62617 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.761 FUNCTIONAL_SNP rs932809 chr10 96488469 Intron 6 82967 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs12784245 chr10 96427951 Intergenic 6 22449 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.55 FUNCTIONAL_SNP rs12773342 chr10 96523083 Intron 6 117581 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs10509676 chr10 96523045 Intron 6 117543 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs7100783 chr10 96464293 Intron 6 58791 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs1853205 chr10 96575069 Intron 7 169567 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2281890 chr10 96493328 Intron 7 87826 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.718 FUNCTIONAL_SNP rs2860838 chr10 96453039 Intron 7 47537 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs12571421 chr10 96541982 Intron 7 136480 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs749745 chr10 96406516 Intergenic 7 1014 CEU:1.0;0.854, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.807 FUNCTIONAL_SNP rs4417205 chr10 96580202 Intron 7 174700 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs1926712 chr10 96477854 Intron 7 72352 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs12782132 chr10 96409503 Intergenic 7 4001 CEU:1.0;1.0 FUNCTIONAL_SNP rs12767583 chr10 96547463 Intron 7 141961 CEU:0.925;0.856, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs12772672 chr10 96566889 Intron 7 161387 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs1322179 chr10 96575242 Intron 7 169740 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs12572499 chr10 96502802 Intron 7 97300 CEU:1.0;0.846, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs6583954 chr10 96534263 Intron 7 128761 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs12768009 chr10 96525865 Intron 7 120363 CEU:1.0;0.854, CHB:1.0;0.835, JPT:1.0;0.8, YRI:1.0;0.534 FUNCTIONAL_SNP rs4532967 chr10 96519197 Intron 7 113695 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs2296680 chr10 96466938 Intron 7 61436 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs7900135 chr10 96465616 Intron 7 60114 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs1326832 chr10 96485584 Intron 7 80082 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs7085563 chr10 96488997 Intron 7 83495 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;0.743, YRI:0.936;0.737 LEAD_SNP rs12767583 chr10 96547463 Intron 7 ASSOCIATION 19578179 Acenocoumarol maintenance dosage 6.52287874528 CYP2C19 FUNCTIONAL_SNP rs4244285 chr10 96541616 Coding 6 5847 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2281891 chr10 96493058 Coding 7 54405 CEU:1.0;0.926, CHB:0.933;0.817, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3758580 chr10 96602622 Coding 7 55159 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1042192 chr10 96495284 Exon,non-coding 7 52179 CEU:1.0;0.926, CHB:0.935;0.874, JPT:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs1042194 chr10 96495484 Exon,non-coding 6 51979 CEU:1.0;0.926, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs4986894 chr10 96522365 Intron 4 25098 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12774450 chr10 96401654 Intergenic 4 145809 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs12765793 chr10 96413072 Intergenic 5b 134391 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.597 FUNCTIONAL_SNP rs12777823 chr10 96405502 Intergenic 5b 141961 CEU:0.925;0.856, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs12778026 chr10 96536227 Intron 6 11236 CEU:1.0;0.926, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;0.745 FUNCTIONAL_SNP rs12767326 chr10 96670039 Intergenic 6 122576 CEU:1.0;0.854, CHB:1.0;0.876, JPT:1.0;0.943, YRI:1.0;0.756 FUNCTIONAL_SNP rs4641393 chr10 96567386 Intron 6 19923 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12784245 chr10 96427951 Intergenic 6 119512 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs12775707 chr10 96645380 Intergenic 6 97917 CEU:1.0;0.854, CHB:1.0;0.876, JPT:1.0;0.887, YRI:1.0;1.0 FUNCTIONAL_SNP rs35390752 chr10 96543823 Intron 6 3640 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs7085890 chr10 96468119 Intron 6 79344 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs2860903 chr10 96666085 Intergenic 6 118622 CEU:1.0;0.854, CHB:1.0;0.876, JPT:1.0;0.942, YRI:1.0;1.0 FUNCTIONAL_SNP rs10509676 chr10 96523045 Intron 6 24418 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2093434 chr10 96638857 Intergenic 6 91394 CEU:1.0;0.854, CHB:1.0;0.876, JPT:1.0;0.833, YRI:1.0;0.924 FUNCTIONAL_SNP rs12573074 chr10 96626202 Intergenic 6 78739 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs717238 chr10 96441300 Intergenic 6 106163 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs932809 chr10 96488469 Intron 6 58994 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs7100783 chr10 96464293 Intron 6 83170 CEU:1.0;0.922, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12773342 chr10 96523083 Intron 6 24380 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12782132 chr10 96409503 Intergenic 7 137960 CEU:0.92;0.846 FUNCTIONAL_SNP rs1926712 chr10 96477854 Intron 7 69609 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs4417205 chr10 96580202 Intron 7 32739 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs6583954 chr10 96534263 Intron 7 13200 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs749745 chr10 96406516 Intergenic 7 140947 CEU:1.0;0.922, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.63 FUNCTIONAL_SNP rs1322179 chr10 96575242 Intron 7 27779 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4532967 chr10 96519197 Intron 7 28266 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1326832 chr10 96485584 Intron 7 61879 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs12768009 chr10 96525865 Intron 7 21598 CEU:1.0;0.922, CHB:0.93;0.764, JPT:1.0;0.8, YRI:1.0;1.0 FUNCTIONAL_SNP rs1853205 chr10 96575069 Intron 7 27606 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0 FUNCTIONAL_SNP rs12571421 chr10 96541982 Intron 7 5481 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2860838 chr10 96453039 Intron 7 94424 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs12772672 chr10 96566889 Intron 7 19426 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs12572499 chr10 96502802 Intron 7 44661 CEU:1.0;0.917, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs2296680 chr10 96466938 Intron 7 80525 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs2281890 chr10 96493328 Intron 7 54135 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.711 FUNCTIONAL_SNP rs35709381 chr10 96614725 Intergenic 7 67262 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.667 FUNCTIONAL_SNP rs1074145 chr10 96681846 Intergenic 7 134383 CEU:1.0;0.854, CHB:1.0;0.876, JPT:1.0;0.943, YRI:1.0;1.0 FUNCTIONAL_SNP rs7900135 chr10 96465616 Intron 7 81847 CEU:1.0;0.926, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs7085563 chr10 96488997 Intron 7 58466 CEU:0.91;0.829, CHB:0.918;0.78, JPT:1.0;0.743 LEAD_SNP rs1799853 chr10 96702047 Coding 7 ASSOCIATION 19300499 Warfarin maintenance dose 31.0 CYP2C9 LEAD_SNP rs4086116 chr10 96707202 Intron 7 ASSOCIATION 18535201 Warfarin maintenance dose 11.2218487496 CYP2C9 FUNCTIONAL_SNP rs4918797 chr10 96750251 Intergenic 6 43049 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1934963 chr10 96734676 Intron 7 27474 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4917639 chr10 96725535 Intron 7 18333 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10509680 chr10 96734339 Intron 7 ASSOCIATION 20833655 Warfarin maintenance dose 6.39794000867 CYP2C9 LEAD_SNP rs1057910 chr10 96741053 Coding 7 ASSOCIATION 19300499 Warfarin maintenance dose 78.5228787453 CYP2C9 LEAD_SNP rs2185570 chr10 96751270 Intergenic 4 ASSOCIATION 21533175 Serum dehydroepiandrosterone sulphate levels 7.69897000434 CYP2C9 - CYP2C8 FUNCTIONAL_SNP rs9332242 chr10 96748893 Exon,non-coding 6 2377 CEU:1.0;1.0 FUNCTIONAL_SNP rs4918795 chr10 96747527 Intron 5a 3743 CEU:1.0;1.0 FUNCTIONAL_SNP rs9332100 chr10 96697820 Intergenic 6 53450 CEU:1.0;1.0 FUNCTIONAL_SNP rs4917636 chr10 96697344 Intergenic 6 53926 CEU:1.0;0.923 FUNCTIONAL_SNP rs2153629 chr10 96741795 Intron 6 9475 CEU:1.0;1.0 FUNCTIONAL_SNP rs4918704 chr10 96633420 Intergenic 6 117850 CEU:1.0;1.0 FUNCTIONAL_SNP rs11596943 chr10 96632711 Intergenic 6 118559 CEU:1.0;1.0 FUNCTIONAL_SNP rs9332222 chr10 96744064 Intron 6 7206 CEU:1.0;1.0 FUNCTIONAL_SNP rs11596290 chr10 96631672 Intergenic 7 119598 CEU:1.0;1.0 FUNCTIONAL_SNP rs9332102 chr10 96697956 Intergenic 7 53314 CEU:1.0;1.0 FUNCTIONAL_SNP rs17442862 chr10 96633012 Intergenic 7 118258 CEU:1.0;1.0 FUNCTIONAL_SNP rs9332119 chr10 96701601 Intron 7 49669 CEU:1.0;0.912 FUNCTIONAL_SNP rs11592225 chr10 96627191 Intergenic 7 124079 CEU:1.0;1.0 FUNCTIONAL_SNP rs2860968 chr10 96713581 Intron 7 37689 CEU:1.0;1.0 FUNCTIONAL_SNP rs4918705 chr10 96633470 Intergenic 7 117800 CEU:1.0;1.0 FUNCTIONAL_SNP rs17443251 chr10 96707890 Intron 7 43380 CEU:1.0;0.923 FUNCTIONAL_SNP rs4918710 chr10 96643059 Intergenic 7 108211 CEU:1.0;0.918 FUNCTIONAL_SNP rs4918716 chr10 96651544 Intergenic 7 99726 CEU:1.0;1.0 FUNCTIONAL_SNP rs4918746 chr10 96676631 Intergenic 7 74639 CEU:1.0;1.0 FUNCTIONAL_SNP rs11596254 chr10 96631632 Intergenic 7 119638 CEU:1.0;1.0 FUNCTIONAL_SNP rs1934966 chr10 96738892 Intron 7 12378 CEU:1.0;1.0 FUNCTIONAL_SNP rs9332216 chr10 96743174 Intron 7 8096 CEU:1.0;1.0 LEAD_SNP rs1934951 chr10 96798548 Intron 5b ASSOCIATION 18594024 Osteonecrosis of the jaw 6.0 CYP2C8 FUNCTIONAL_SNP rs1058932 chr10 96796861 Exon,non-coding 7 1687 CEU:1.0;0.936, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10882518 chr10 96795460 Intergenic 7 3088 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10786284 chr10 98135505 Intron 2b ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.69897000434 TLL2 LEAD_SNP rs531676 chr10 99637578 Intron 7 ASSOCIATION 20694148 Metabolic syndrome 5.04575749056 CRTAC1 LEAD_SNP rs508001 chr10 99754973 Intron 7 ASSOCIATION 20595579 Longevity 8.15490195999 CRTAC1 FUNCTIONAL_SNP rs510100 chr10 99747061 Intron 6 7912 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs479279 chr10 99760576 Intron 6 5603 CEU:1.0;1.0, CHB:1.0;0.821, JPT:1.0;1.0 FUNCTIONAL_SNP rs506440 chr10 99747448 Intron 6 7525 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2584525 chr10 99757291 Intron 6 2318 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11189457 chr10 99744372 Intron 6 10601 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1548052 chr10 99744081 Intron 6 10892 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.774 FUNCTIONAL_SNP rs495652 chr10 99758611 Intron 7 3638 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs487602 chr10 99741187 Intron 7 13786 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs479421 chr10 99760632 Intron 7 5659 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs493761 chr10 99758389 Intron 7 3416 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs568549 chr10 99746366 Intron 7 8607 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs505456 chr10 99748638 Intron 7 6335 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4409764 chr10 101284237 Intergenic 4 ASSOCIATION 21102463 Crohn's disease 19.6989700043 GOT1 - NKX2-3 FUNCTIONAL_SNP rs10883365 chr10 101287764 Exon,non-coding 4 3527 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.694 FUNCTIONAL_SNP rs10883367 chr10 101287990 Exon,non-coding 4 3753 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.578 FUNCTIONAL_SNP rs10883371 chr10 101292455 Intergenic 2b 8218 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1332099 chr10 101298451 Intergenic 4 14214 CEU:1.0;0.822, CHB:1.0;1.0, JPT:0.948;0.817 FUNCTIONAL_SNP rs1548962 chr10 101289735 Intergenic 4 5498 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.633 FUNCTIONAL_SNP rs1548964 chr10 101289653 Intergenic 4 5416 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs10883373 chr10 101292484 Intergenic 4 8247 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4129132 chr10 101284637 Intergenic 4 400 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4919342 chr10 101282553 Intergenic 5b 1684 CEU:1.0;0.961, CHB:1.0;0.908, JPT:0.949;0.858 FUNCTIONAL_SNP rs7077040 chr10 101281014 Intergenic 5b 3223 CEU:1.0;0.962, CHB:1.0;0.91, JPT:0.95;0.861, YRI:0.808;0.629 FUNCTIONAL_SNP rs6584283 chr10 101290301 Intergenic 5b 6064 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11190140 chr10 101291593 Intergenic 5b 7356 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7092009 chr10 101277239 Intergenic 7 6998 CEU:1.0;0.962, CHB:1.0;0.91, JPT:0.95;0.861 FUNCTIONAL_SNP rs7095491 chr10 101274058 Intergenic 7 10179 CEU:1.0;0.962, CHB:1.0;0.91, JPT:0.948;0.818 FUNCTIONAL_SNP rs6584277 chr10 101278055 Intergenic 7 6182 CEU:1.0;0.958, CHB:1.0;0.902, JPT:0.943;0.842 FUNCTIONAL_SNP rs7096296 chr10 101277816 Intergenic 7 6421 CEU:1.0;0.885, CHB:1.0;0.91, JPT:0.95;0.861, YRI:0.842;0.659 LEAD_SNP rs10883365 chr10 101287764 Exon,non-coding 4 ASSOCIATION 17554300 Crohn's disease 7.22184874962 GOT1 - NKX2-3 ASSOCIATION 17554261 Crohn's disease 9.39794000867 GOT1 - NKX2-3 FUNCTIONAL_SNP rs10883367 chr10 101287990 Exon,non-coding 4 226 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs1548962 chr10 101289735 Intergenic 4 1971 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.964;0.928 FUNCTIONAL_SNP rs1548964 chr10 101289653 Intergenic 4 1889 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 LEAD_SNP rs6584283 chr10 101290301 Intergenic 5b ASSOCIATION 21297633 Ulcerative colitis 20.096910013 GOT1 - NKX2-3 ASSOCIATION 20228798 Ulcerative colitis 5.69897000434 GOT1 - NKX2-3 ASSOCIATION 19915572 Ulcerative colitis 6.69897000434 GOT1 - NKX2-3 FUNCTIONAL_SNP rs10883365 chr10 101287764 Exon,non-coding 4 2537 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.591 FUNCTIONAL_SNP rs10883367 chr10 101287990 Exon,non-coding 4 2311 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.71 FUNCTIONAL_SNP rs10883371 chr10 101292455 Intergenic 2b 2154 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1548962 chr10 101289735 Intergenic 4 566 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.949;0.532 FUNCTIONAL_SNP rs4409764 chr10 101284237 Intergenic 4 6064 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10883373 chr10 101292484 Intergenic 4 2183 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1548964 chr10 101289653 Intergenic 4 648 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.553 FUNCTIONAL_SNP rs4129132 chr10 101284637 Intergenic 4 5664 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4919342 chr10 101282553 Intergenic 5b 7748 CEU:0.958;0.848, CHB:1.0;0.908, JPT:0.949;0.858, YRI:0.83;0.612 FUNCTIONAL_SNP rs7077040 chr10 101281014 Intergenic 5b 9287 CEU:0.959;0.85, CHB:1.0;0.91, JPT:0.95;0.861 FUNCTIONAL_SNP rs11190140 chr10 101291593 Intergenic 5b 1292 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.88;0.775 FUNCTIONAL_SNP rs7092009 chr10 101277239 Intergenic 7 13062 CEU:0.959;0.85, CHB:1.0;0.91, JPT:0.95;0.861, YRI:0.82;0.572 FUNCTIONAL_SNP rs7095491 chr10 101274058 Intergenic 7 16243 CEU:0.959;0.85, CHB:1.0;0.91, JPT:0.948;0.818 FUNCTIONAL_SNP rs6584277 chr10 101278055 Intergenic 7 12246 CEU:0.955;0.837, CHB:1.0;0.902, JPT:0.943;0.842, YRI:0.786;0.534 LEAD_SNP rs11190140 chr10 101291593 Intergenic 5b ASSOCIATION 20228799 Ulcerative colitis 8.0 NKX2-3 ASSOCIATION 18587394 Crohn's disease 15.5228787453 NKX2-3 FUNCTIONAL_SNP rs10883365 chr10 101287764 Exon,non-coding 4 3829 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.591 FUNCTIONAL_SNP rs10883367 chr10 101287990 Exon,non-coding 4 3603 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.71 FUNCTIONAL_SNP rs10883371 chr10 101292455 Intergenic 2b 862 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.868;0.598 FUNCTIONAL_SNP rs1332099 chr10 101298451 Intergenic 4 6858 CEU:1.0;0.855, CHB:1.0;1.0, JPT:0.948;0.817, YRI:0.949;0.532 FUNCTIONAL_SNP rs1548962 chr10 101289735 Intergenic 4 1858 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.533 FUNCTIONAL_SNP rs4409764 chr10 101284237 Intergenic 4 7356 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10883373 chr10 101292484 Intergenic 4 891 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.861;0.526 FUNCTIONAL_SNP rs1548964 chr10 101289653 Intergenic 4 1940 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.554 FUNCTIONAL_SNP rs4129132 chr10 101284637 Intergenic 4 6956 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4919342 chr10 101282553 Intergenic 5b 9040 CEU:0.96;0.921, CHB:1.0;0.908, JPT:0.949;0.858, YRI:0.958;0.815 FUNCTIONAL_SNP rs7077040 chr10 101281014 Intergenic 5b 10579 CEU:0.961;0.923, CHB:1.0;0.91, JPT:0.95;0.861 FUNCTIONAL_SNP rs6584283 chr10 101290301 Intergenic 5b 1292 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.88;0.775 FUNCTIONAL_SNP rs7092009 chr10 101277239 Intergenic 7 14354 CEU:0.961;0.923, CHB:1.0;0.91, JPT:0.95;0.861, YRI:0.955;0.776 FUNCTIONAL_SNP rs7095491 chr10 101274058 Intergenic 7 17535 CEU:0.961;0.923, CHB:1.0;0.91, JPT:0.948;0.818 FUNCTIONAL_SNP rs6584277 chr10 101278055 Intergenic 7 13538 CEU:0.957;0.916, CHB:1.0;0.902, JPT:0.943;0.842, YRI:0.947;0.776 FUNCTIONAL_SNP rs7096296 chr10 101277816 Intergenic 7 13777 CEU:0.957;0.844, CHB:1.0;0.91, JPT:0.95;0.861 LEAD_SNP rs11597390 chr10 101861435 Intergenic 2b ASSOCIATION 18940312 Plasma levels of liver enzymes 7.69897000434 CPN1 - ERLIN1 FUNCTIONAL_SNP rs11598495 chr10 101889417 Intergenic 4 27982 CEU:1.0;0.814, CHB:1.0;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs11596211 chr10 101840119 Intron 5b 21316 CEU:0.954;0.834, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs9888058 chr10 101859205 Intergenic 5b 2230 CEU:1.0;0.912, CHB:1.0;0.677, YRI:1.0;0.573 FUNCTIONAL_SNP rs7474634 chr10 101863410 Intergenic 5b 1975 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7899288 chr10 101848444 Intergenic 6 12991 CEU:1.0;0.842, CHB:1.0;1.0 FUNCTIONAL_SNP rs7068215 chr10 101859870 Intergenic 6 1565 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4475856 chr10 101833339 Intron 6 28096 CEU:1.0;0.913, CHB:1.0;0.897, JPT:1.0;0.741 FUNCTIONAL_SNP rs2862947 chr10 101863817 Intergenic 6 2382 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2862951 chr10 101844948 Intergenic 6 16487 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs11598979 chr10 101833720 Intron 7 27715 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;0.741, YRI:1.0;0.937 FUNCTIONAL_SNP rs12775433 chr10 101834092 Intron 7 27343 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;0.741, YRI:1.0;0.937 FUNCTIONAL_SNP rs12776483 chr10 101828600 Intron 7 32835 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;0.741 FUNCTIONAL_SNP rs12780514 chr10 101865884 Intergenic 7 4449 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11597561 chr10 101863041 Intergenic 7 1606 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4509693 chr10 102501571 Intergenic 5b ASSOCIATION term=200 Alzheimer's disease 5.22184874962 HIF1AN - PAX2 LEAD_SNP rs17115100 chr10 104591393 Intron 5b ASSOCIATION 19915575 Parkinson's disease 7.15490195999 CYP17A1 FUNCTIONAL_SNP rs1004467 chr10 104594507 Exon,non-coding 5b 3114 CEU:1.0;1.0, CHB:0.947;0.897, JPT:0.934;0.82 FUNCTIONAL_SNP rs7098825 chr10 104628234 Exon,non-coding 7 36841 CEU:1.0;1.0, CHB:0.805;0.522, JPT:0.93;0.762, YRI:1.0;0.66 FUNCTIONAL_SNP rs12221064 chr10 104677126 Intergenic 2b 85733 CEU:1.0;0.848, CHB:0.93;0.62, JPT:1.0;0.769 FUNCTIONAL_SNP rs3824754 chr10 104614350 Intron 2b 22957 CEU:1.0;1.0, CHB:0.948;0.898, JPT:0.934;0.82 FUNCTIONAL_SNP rs11191479 chr10 104723620 Intron 4 132227 CEU:1.0;0.848, CHB:0.93;0.62, JPT:1.0;0.769 FUNCTIONAL_SNP rs11191514 chr10 104773364 Intron 4 181971 CEU:1.0;0.848, CHB:0.93;0.62, JPT:1.0;0.769 FUNCTIONAL_SNP rs999867 chr10 104504564 Intron 4 86829 CEU:1.0;0.866, CHB:0.875;0.568 FUNCTIONAL_SNP rs4409766 chr10 104616663 Intron 5b 25270 CEU:1.0;1.0, CHB:0.865;0.569, JPT:0.93;0.762 FUNCTIONAL_SNP rs17115213 chr10 104681143 Intron 5b 89750 CEU:1.0;0.848, CHB:0.925;0.632, JPT:1.0;0.758 FUNCTIONAL_SNP rs4147157 chr10 104536360 Intron 5b 55033 CEU:1.0;0.866, CHB:0.875;0.568 FUNCTIONAL_SNP rs11191515 chr10 104776527 Intron 5b 185134 CEU:1.0;0.848, CHB:0.928;0.616, JPT:1.0;0.769 FUNCTIONAL_SNP rs10883808 chr10 104721126 Intron 5b 129733 CEU:1.0;0.848, CHB:0.93;0.62, JPT:1.0;0.715 FUNCTIONAL_SNP rs11191454 chr10 104660004 Intron 6 68611 CEU:1.0;0.848, CHB:0.93;0.62, JPT:1.0;0.769 FUNCTIONAL_SNP rs10509759 chr10 104689665 Intron 6 98272 CEU:1.0;0.848, CHB:0.928;0.616, JPT:1.0;0.75 FUNCTIONAL_SNP rs11191472 chr10 104707016 Intron 6 115623 CEU:1.0;0.848, CHB:0.928;0.643, JPT:1.0;0.715 FUNCTIONAL_SNP rs12413409 chr10 104719096 Intron 6 127703 CEU:1.0;0.848, CHB:0.93;0.62, JPT:1.0;0.715 FUNCTIONAL_SNP rs3740390 chr10 104638480 Intron 6 47087 CEU:1.0;0.848, CHB:0.93;0.62, JPT:1.0;0.769 FUNCTIONAL_SNP rs10883815 chr10 104739179 Intron 6 147786 CEU:1.0;0.825, CHB:0.93;0.62, JPT:1.0;0.769 FUNCTIONAL_SNP rs12411886 chr10 104685299 Intron 6 93906 CEU:1.0;0.848, CHB:0.93;0.62, JPT:1.0;0.769 FUNCTIONAL_SNP rs11191499 chr10 104764271 Intron 6 172878 CEU:1.0;0.848, CHB:0.93;0.62, JPT:1.0;0.769 FUNCTIONAL_SNP rs11191416 chr10 104604916 Intergenic 6 13523 CEU:1.0;1.0, CHB:0.946;0.85, JPT:0.934;0.82, YRI:1.0;0.66 FUNCTIONAL_SNP rs11191425 chr10 104625970 Intergenic 7 34577 CEU:1.0;1.0, CHB:0.93;0.62, JPT:1.0;0.824, YRI:1.0;0.66 FUNCTIONAL_SNP rs3824755 chr10 104595849 Intron 7 4456 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.881 LEAD_SNP rs1004467 chr10 104594507 Exon,non-coding 5b ASSOCIATION 19430479 Systolic blood pressure 10.0 CYP17A1 LEAD_SNP rs12413409 chr10 104719096 Intron 6 ASSOCIATION 21378990 Coronary heart disease 9.0 CNNM2 ASSOCIATION 21378988 Coronary heart disease 5.39794000867 CNNM2 ASSOCIATION 20364137 Intracranial aneurysm 9.0 CNNM2 FUNCTIONAL_SNP rs943037 chr10 104835919 Coding 5b 116823 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.93 FUNCTIONAL_SNP rs1004467 chr10 104594507 Exon,non-coding 5b 124589 CEU:1.0;0.848, CHB:0.928;0.616, JPT:1.0;0.761 FUNCTIONAL_SNP rs7098825 chr10 104628234 Exon,non-coding 7 90862 CEU:1.0;0.848, CHB:1.0;0.891, JPT:1.0;0.812 FUNCTIONAL_SNP rs11191548 chr10 104846178 Exon,non-coding 5b 127082 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.93, YRI:1.0;0.66 FUNCTIONAL_SNP rs12221064 chr10 104677126 Intergenic 2b 41970 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs3824754 chr10 104614350 Intron 2b 104746 CEU:1.0;0.848, CHB:1.0;0.718, JPT:1.0;0.761 FUNCTIONAL_SNP rs9633712 chr10 104873761 Intron 3b 154665 CEU:1.0;1.0, CHB:1.0;0.885, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs1926032 chr10 104829469 Intron 4 110373 CEU:1.0;0.825, CHB:1.0;0.937, JPT:0.85;0.722 FUNCTIONAL_SNP rs11191580 chr10 104906211 Intron 4 187115 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.93 FUNCTIONAL_SNP rs11191582 chr10 104913653 Intron 4 194557 CEU:1.0;1.0, CHB:1.0;0.877, JPT:0.917;0.841 FUNCTIONAL_SNP rs11191479 chr10 104723620 Intron 4 4524 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs11191514 chr10 104773364 Intron 4 54268 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs3781285 chr10 104825665 Intron 5a 106569 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.93 FUNCTIONAL_SNP rs12413046 chr10 104871204 Intron 5a 152108 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.93 FUNCTIONAL_SNP rs10883832 chr10 104871279 Intron 5a 152183 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.93 FUNCTIONAL_SNP rs11191557 chr10 104864614 Intron 5b 145518 CEU:1.0;1.0, CHB:1.0;0.942, JPT:0.917;0.841 FUNCTIONAL_SNP rs11191558 chr10 104864678 Intron 5b 145582 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.93 FUNCTIONAL_SNP rs10458729 chr10 104841479 Intergenic 5b 122383 CEU:1.0;1.0 FUNCTIONAL_SNP rs12412038 chr10 104856162 Intron 5b 137066 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.929 FUNCTIONAL_SNP rs4409766 chr10 104616663 Intron 5b 102433 CEU:1.0;0.848, CHB:1.0;0.943, JPT:1.0;0.812 FUNCTIONAL_SNP rs17115213 chr10 104681143 Intron 5b 37953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.926, YRI:1.0;0.66 FUNCTIONAL_SNP rs11191515 chr10 104776527 Intron 5b 57431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs17115100 chr10 104591393 Intron 5b 127703 CEU:1.0;0.848, CHB:0.93;0.62, JPT:1.0;0.715 FUNCTIONAL_SNP rs10883808 chr10 104721126 Intron 5b 2030 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11191531 chr10 104806898 Intron 6 87802 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;0.924, YRI:1.0;0.66 FUNCTIONAL_SNP rs12220375 chr10 104901491 Intron 6 182395 CEU:1.0;1.0, CHB:1.0;0.942, JPT:0.925;0.856 FUNCTIONAL_SNP rs11191555 chr10 104857523 Intron 6 138427 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;0.919 FUNCTIONAL_SNP rs11191447 chr10 104652323 Intron 6 66773 CEU:1.0;1.0, CHB:0.933;0.87, JPT:0.806;0.65, YRI:1.0;0.742 FUNCTIONAL_SNP rs17094683 chr10 104851301 Intron 6 132205 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs11191454 chr10 104660004 Intron 6 59092 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs11191543 chr10 104824387 Intron 6 105291 CEU:1.0;1.0, CHB:1.0;0.921, JPT:0.909;0.759, YRI:1.0;1.0 FUNCTIONAL_SNP rs11191472 chr10 104707016 Intron 6 12080 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12217501 chr10 104851889 Intron 6 132793 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;0.93 FUNCTIONAL_SNP rs11191560 chr10 104869038 Intron 6 149942 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;0.93 FUNCTIONAL_SNP rs10509759 chr10 104689665 Intron 6 29431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.923, YRI:1.0;0.66 FUNCTIONAL_SNP rs11191499 chr10 104764271 Intron 6 45175 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs732998 chr10 104897901 Intron 6 178805 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs11191416 chr10 104604916 Intergenic 6 114180 CEU:1.0;0.848, CHB:1.0;0.681, JPT:1.0;0.761 FUNCTIONAL_SNP rs12219027 chr10 104811203 Intron 6 92107 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;0.923, YRI:1.0;1.0 FUNCTIONAL_SNP rs10883806 chr10 104713076 Intron 6 6020 CEU:1.0;0.848, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.66 FUNCTIONAL_SNP rs3740390 chr10 104638480 Intron 6 80616 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs10883815 chr10 104739179 Intron 6 20083 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs12411886 chr10 104685299 Intron 6 33797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs11191425 chr10 104625970 Intergenic 7 93126 CEU:1.0;0.848, CHB:1.0;1.0, JPT:1.0;0.868 FUNCTIONAL_SNP rs12220743 chr10 104851912 Intron 7 132816 CEU:1.0;1.0 FUNCTIONAL_SNP rs3824755 chr10 104595849 Intron 7 123247 CEU:1.0;0.848, CHB:0.932;0.656, JPT:1.0;0.812 LEAD_SNP rs11191548 chr10 104846178 Exon,non-coding 5b ASSOCIATION 21572416 Blood pressure 11.15490196 NT5C2 ASSOCIATION 21572416 Blood pressure 16.3979400087 NT5C2 ASSOCIATION 19430483 Systolic blood pressure 23.15490196 NT5C2 FUNCTIONAL_SNP rs943037 chr10 104835919 Coding 5b 10259 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12221064 chr10 104677126 Intergenic 2b 169052 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs9633712 chr10 104873761 Intron 3b 27583 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs1926032 chr10 104829469 Intron 4 16709 CEU:1.0;0.825, CHB:1.0;1.0, JPT:0.924;0.794 FUNCTIONAL_SNP rs11191580 chr10 104906211 Intron 4 60033 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11191582 chr10 104913653 Intron 4 67475 CEU:1.0;1.0, CHB:1.0;0.935, JPT:1.0;0.923 FUNCTIONAL_SNP rs11191479 chr10 104723620 Intron 4 122558 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs11191514 chr10 104773364 Intron 4 72814 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs3781285 chr10 104825665 Intron 5a 20513 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12413046 chr10 104871204 Intron 5a 25026 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10883832 chr10 104871279 Intron 5a 25101 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11191557 chr10 104864614 Intron 5b 18436 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.923 FUNCTIONAL_SNP rs11191558 chr10 104864678 Intron 5b 18500 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12412038 chr10 104856162 Intron 5b 9984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17115213 chr10 104681143 Intron 5b 165035 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11191515 chr10 104776527 Intron 5b 69651 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;1.0 FUNCTIONAL_SNP rs10883808 chr10 104721126 Intron 5b 125052 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.93, YRI:1.0;0.66 FUNCTIONAL_SNP rs10458729 chr10 104841479 Intergenic 5b 4699 CEU:1.0;1.0 FUNCTIONAL_SNP rs11191555 chr10 104857523 Intron 6 11345 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11191560 chr10 104869038 Intron 6 22860 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12220375 chr10 104901491 Intron 6 55313 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs12219027 chr10 104811203 Intron 6 34975 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs11191447 chr10 104652323 Intron 6 193855 CEU:1.0;1.0, CHB:1.0;0.935, JPT:0.901;0.741 FUNCTIONAL_SNP rs17094683 chr10 104851301 Intron 6 5123 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs12217501 chr10 104851889 Intron 6 5711 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11191454 chr10 104660004 Intron 6 186174 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs11191543 chr10 104824387 Intron 6 21791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.848, YRI:1.0;0.66 FUNCTIONAL_SNP rs11191472 chr10 104707016 Intron 6 139162 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;0.93 FUNCTIONAL_SNP rs10509759 chr10 104689665 Intron 6 156513 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11191499 chr10 104764271 Intron 6 81907 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs732998 chr10 104897901 Intron 6 51723 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs10883806 chr10 104713076 Intron 6 133102 CEU:1.0;0.848, CHB:1.0;0.929, JPT:0.912;0.832, YRI:1.0;1.0 FUNCTIONAL_SNP rs12413409 chr10 104719096 Intron 6 127082 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.93, YRI:1.0;0.66 FUNCTIONAL_SNP rs10883815 chr10 104739179 Intron 6 106999 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs11191531 chr10 104806898 Intron 6 39280 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12411886 chr10 104685299 Intron 6 160879 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs11191593 chr10 104939215 Intron 6 93037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs12220743 chr10 104851912 Intron 7 5734 CEU:1.0;1.0 LEAD_SNP rs7071247 chr10 105257786 Intron 7 ASSOCIATION 20526338 Platelet aggregation 6.69897000434 NEURL FUNCTIONAL_SNP rs3014183 chr10 105274270 Intron 4 16484 CEU:1.0;1.0, CHB:1.0;0.739, JPT:1.0;0.895 FUNCTIONAL_SNP rs10883875 chr10 105259917 Intron 5b 2131 CEU:1.0;1.0, CHB:1.0;0.839, JPT:1.0;0.946, YRI:1.0;0.523 FUNCTIONAL_SNP rs3014204 chr10 105260229 Intron 5b 2443 CEU:1.0;0.906, CHB:1.0;0.839, JPT:1.0;0.946 FUNCTIONAL_SNP rs12252305 chr10 105279335 Intron 7 21549 CEU:1.0;1.0, CHB:1.0;0.692, JPT:1.0;0.895, YRI:0.898;0.807 LEAD_SNP rs3814219 chr10 105647095 Intron 7 ASSOCIATION 17903301 Endothelial function traits 6.04575749056 OBFC1 FUNCTIONAL_SNP rs11191853 chr10 105657363 Coding 4 10268 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3752948 chr10 105670762 Intron 4 23667 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3752949 chr10 105670503 Intron 4 23408 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11191842 chr10 105639808 Intergenic 6 7287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11596104 chr10 105623461 Intergenic 7 23634 CEU:1.0;0.855, CHB:1.0;0.897, JPT:1.0;0.84, YRI:1.0;1.0 LEAD_SNP rs4387287 chr10 105677897 Exon,non-coding 4 ASSOCIATION 20421499 Telomere length 10.6989700043 OBFC1 LEAD_SNP rs7913069 chr10 105714399 Intergenic 6 ASSOCIATION 21460842 Uterine fibroids 13.0457574906 OBFC1 - SLK FUNCTIONAL_SNP rs6584581 chr10 105714925 Intergenic 6 526 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1320448 chr10 105846074 Intergenic 5b ASSOCIATION 21348951 Cardiac hypertrophy 7.69897000434 COL17A1 LEAD_SNP rs515910 chr10 105966404 Intron 7 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.39794000867 C10orf79 FUNCTIONAL_SNP rs678292 chr10 105957561 Intron 4 8843 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs677904 chr10 105957613 Intron 5a 8791 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs527154 chr10 105943683 Intron 5a 22721 CEU:0.959;0.919, CHB:1.0;0.859, JPT:1.0;0.908, YRI:1.0;0.914 FUNCTIONAL_SNP rs479879 chr10 105945985 Intron 6 20419 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs624159 chr10 105939451 Intron 6 26953 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.908, YRI:1.0;0.912 FUNCTIONAL_SNP rs642743 chr10 105933417 Intron 6 32987 CEU:1.0;1.0, CHB:1.0;0.815, JPT:1.0;0.908, YRI:1.0;0.914 FUNCTIONAL_SNP rs789970 chr10 105977721 Intron 6 11317 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1147610 chr10 105941167 Intron 6 25237 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;0.906, YRI:1.0;0.914 FUNCTIONAL_SNP rs569967 chr10 105942337 Intron 6 24067 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;0.908, YRI:1.0;0.91 FUNCTIONAL_SNP rs584309 chr10 105956776 Intron 6 9628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs556292 chr10 105961957 Intron 7 4447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs614406 chr10 105954650 Intron 7 11754 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs601019 chr10 105976452 Intron 7 10048 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs581686 chr10 105983356 Intron 7 16952 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs686441 chr10 105950233 Intron 7 16171 CEU:1.0;1.0, CHB:1.0;0.859, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs17119461 chr10 107516352 Intergenic 5b ASSOCIATION 21706340 Melanoma 11.15490196 YWHAZP5 - RPL23AP59 FUNCTIONAL_SNP rs10509794 chr10 107460228 Intergenic 3a 56124 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs1019417 chr10 107467627 Intergenic 5a 48725 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs7906392 chr10 107582222 Intergenic 5a 65870 CEU:1.0;1.0 FUNCTIONAL_SNP rs17119332 chr10 107443753 Intergenic 5a 72599 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs17119292 chr10 107423232 Intergenic 5b 93120 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs4463783 chr10 107542080 Intergenic 5b 25728 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.901;0.812 FUNCTIONAL_SNP rs17119469 chr10 107518140 Intergenic 5b 1788 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7080489 chr10 107505671 Intergenic 5b 10681 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.814;0.51 FUNCTIONAL_SNP rs17119578 chr10 107558895 Intergenic 5b 42543 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.864;0.51 FUNCTIONAL_SNP rs4485033 chr10 107519573 Intergenic 5b 3221 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17119235 chr10 107394991 Intergenic 6 121361 CEU:1.0;1.0 FUNCTIONAL_SNP rs7088681 chr10 107512448 Intergenic 6 3904 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.822;0.549 FUNCTIONAL_SNP rs17119309 chr10 107424402 Intergenic 6 91950 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs2418779 chr10 107546152 Intergenic 6 29800 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17119345 chr10 107453898 Intergenic 6 62454 CEU:1.0;1.0 FUNCTIONAL_SNP rs7097506 chr10 107580137 Intergenic 6 63785 CEU:1.0;1.0 FUNCTIONAL_SNP rs4604798 chr10 107524784 Intergenic 6 8432 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.683 FUNCTIONAL_SNP rs918321 chr10 107516878 Intergenic 6 526 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7923542 chr10 107502983 Intergenic 6 13369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7919079 chr10 107501893 Intergenic 6 14459 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6584696 chr10 107578214 Intron 6 61862 CEU:1.0;1.0 FUNCTIONAL_SNP rs6584703 chr10 107584772 Intergenic 6 68420 CEU:1.0;1.0 FUNCTIONAL_SNP rs10509793 chr10 107459266 Intergenic 6 57086 CEU:1.0;1.0, CHB:1.0;0.658, JPT:1.0;1.0 FUNCTIONAL_SNP rs10509801 chr10 107533520 Intergenic 6 17168 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.901;0.812 FUNCTIONAL_SNP rs7910895 chr10 107583339 Intergenic 6 66987 CEU:1.0;1.0 FUNCTIONAL_SNP rs7921161 chr10 107514604 Intergenic 7 1748 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7921675 chr10 107514761 Intergenic 7 1591 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1019418 chr10 107467136 Intergenic 7 49216 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs17119264 chr10 107409754 Intergenic 7 106598 CEU:1.0;1.0 FUNCTIONAL_SNP rs7922744 chr10 107582137 Intergenic 7 65785 CEU:1.0;1.0 FUNCTIONAL_SNP rs7896129 chr10 107510792 Intergenic 7 5560 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659, YRI:0.823;0.551 FUNCTIONAL_SNP rs7913033 chr10 107520402 Intergenic 7 4050 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17119306 chr10 107423855 Intergenic 7 92497 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs17119337 chr10 107450578 Intergenic 7 65774 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs17119343 chr10 107453518 Intergenic 7 62834 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs7091340 chr10 107584035 Intergenic 7 67683 CEU:1.0;1.0 FUNCTIONAL_SNP rs17119432 chr10 107504396 Intergenic 7 11956 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4364985 chr10 107519453 Intergenic 7 3101 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17119434 chr10 107505161 Intergenic 7 11191 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17119466 chr10 107517666 Intergenic 7 1314 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17119487 chr10 107522842 Intergenic 7 6490 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17119490 chr10 107522927 Intergenic 7 6575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.683 FUNCTIONAL_SNP rs11192584 chr10 107521242 Intergenic 7 4890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17119511 chr10 107528338 Intergenic 7 11986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17119519 chr10 107530365 Intergenic 7 14013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7917345 chr10 107514038 Intergenic 7 2314 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.664 FUNCTIONAL_SNP rs17119534 chr10 107544706 Intergenic 7 28354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.856 FUNCTIONAL_SNP rs7096653 chr10 107579517 Intergenic 7 63165 CEU:1.0;1.0 FUNCTIONAL_SNP rs17119484 chr10 107522100 Intergenic 7 5748 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17119590 chr10 107562028 Intergenic 7 45676 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6584697 chr10 107578462 Intron 7 62110 CEU:1.0;1.0 FUNCTIONAL_SNP rs6584700 chr10 107581146 Intergenic 7 64794 CEU:1.0;1.0 FUNCTIONAL_SNP rs6584701 chr10 107581161 Intergenic 7 64809 CEU:1.0;1.0 FUNCTIONAL_SNP rs7916414 chr10 107520586 Intergenic 7 4234 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4439444 chr10 107527350 Intergenic 7 10998 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1862055 chr10 107507919 Intergenic 7 8433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.823;0.551 FUNCTIONAL_SNP rs1862056 chr10 107507979 Intergenic 7 8373 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.823;0.551 FUNCTIONAL_SNP rs17119394 chr10 107477531 Intergenic 7 38821 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs10509797 chr10 107486223 Intergenic 7 30129 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10509798 chr10 107503741 Intergenic 7 12611 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10509799 chr10 107507464 Intergenic 7 8888 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.823;0.551 FUNCTIONAL_SNP rs10509800 chr10 107520025 Intergenic 7 3673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10509802 chr10 107533731 Intergenic 7 17379 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.901;0.812 FUNCTIONAL_SNP rs10509803 chr10 107533851 Intergenic 7 17499 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.901;0.812 FUNCTIONAL_SNP rs10509805 chr10 107554733 Intergenic 7 38381 CEU:1.0;1.0 FUNCTIONAL_SNP rs2111993 chr10 107444286 Intergenic 7 72066 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs9665022 chr10 107583163 Intergenic 7 66811 CEU:1.0;1.0 LEAD_SNP rs17095355 chr10 111735750 Intergenic 5b ASSOCIATION 20460270 Biliary atresia 8.15490195999 RNU4-5P - ADD3 FUNCTIONAL_SNP rs975442 chr10 111705895 Exon,non-coding 7 29855 CEU:1.0;1.0, CHB:1.0;0.954, JPT:0.945;0.847, YRI:0.956;0.81 FUNCTIONAL_SNP rs4565840 chr10 111717140 Intergenic 2b 18610 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;0.889 FUNCTIONAL_SNP rs731793 chr10 111716667 Intergenic 4 19083 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;0.889 FUNCTIONAL_SNP rs12254785 chr10 111699607 Intergenic 5b 36143 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.889, YRI:1.0;0.871 FUNCTIONAL_SNP rs12267714 chr10 111722052 Intergenic 5b 13698 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.9, YRI:1.0;1.0 FUNCTIONAL_SNP rs12570820 chr10 111732507 Intergenic 5b 3243 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs921348 chr10 111707498 Intron 5b 28252 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.945;0.847, YRI:1.0;1.0 FUNCTIONAL_SNP rs12259261 chr10 111725145 Intergenic 5b 10605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;0.961 FUNCTIONAL_SNP rs12240333 chr10 111743972 Intergenic 5b 8222 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12570612 chr10 111717685 Intergenic 5b 18065 CEU:1.0;0.848, CHB:1.0;1.0, JPT:1.0;0.9, YRI:0.958;0.816 FUNCTIONAL_SNP rs11194917 chr10 111692552 Intergenic 7 43198 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.9, YRI:0.958;0.846 FUNCTIONAL_SNP rs11194926 chr10 111700922 Intergenic 7 34828 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;0.961 FUNCTIONAL_SNP rs9988702 chr10 111703389 Intron 7 32361 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;0.961 FUNCTIONAL_SNP rs7080576 chr10 111710817 Intron 7 24933 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;0.889 FUNCTIONAL_SNP rs921351 chr10 111704715 Intron 7 31035 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.945;0.847, YRI:1.0;0.961 FUNCTIONAL_SNP rs12569906 chr10 111706856 Intron 7 28894 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.899, YRI:1.0;0.888 FUNCTIONAL_SNP rs7085888 chr10 111713930 Intergenic 7 21820 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;1.0 FUNCTIONAL_SNP rs1376111 chr10 111707255 Intron 7 28495 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;0.889 FUNCTIONAL_SNP rs12246851 chr10 111726340 Intergenic 7 9410 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs734163 chr10 111698192 Intergenic 7 37558 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;0.889 FUNCTIONAL_SNP rs12263915 chr10 111744664 Intergenic 7 8914 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.876 FUNCTIONAL_SNP rs17126902 chr10 111710381 Intron 7 25369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.9, YRI:1.0;1.0 LEAD_SNP rs716595 chr10 112006486 Intron 6 ASSOCIATION 19010793 Normalized brain volume 5.09691001301 MXI1 LEAD_SNP rs869244 chr10 112909105 Intergenic 5b ASSOCIATION 20526338 Platelet aggregation 11.5228787453 ADRA2A - RPS6P15 FUNCTIONAL_SNP rs4545476 chr10 112922409 Intergenic 6 13304 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7093511 chr10 112894869 Intergenic 7 14236 CEU:1.0;0.803 LEAD_SNP rs10885122 chr10 113042093 Intergenic 7 ASSOCIATION 20081858 Fasting glucose-related traits 5.69897000434 ADRA2A - RPS6P15 ASSOCIATION 20081858 Fasting glucose-related traits 15.5228787453 ADRA2A - RPS6P15 FUNCTIONAL_SNP rs11195502 chr10 113039667 Intergenic 5b 2426 CEU:1.0;0.802, CHB:1.0;0.551 FUNCTIONAL_SNP rs12784552 chr10 113036354 Intergenic 7 5739 CEU:1.0;0.802 FUNCTIONAL_SNP rs4287275 chr10 113022313 Intergenic 7 19780 CEU:1.0;0.802, CHB:1.0;0.551 FUNCTIONAL_SNP rs12255945 chr10 113033224 Intergenic 7 8869 CEU:1.0;0.802, CHB:1.0;0.551 FUNCTIONAL_SNP rs4548554 chr10 113029377 Intergenic 7 12716 CEU:1.0;0.802, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.892;0.718 FUNCTIONAL_SNP rs7071574 chr10 113033128 Intergenic 7 8965 CEU:1.0;0.802, CHB:1.0;0.551 FUNCTIONAL_SNP rs11195496 chr10 113021531 Intergenic 7 20562 CEU:1.0;0.802, CHB:1.0;0.551 FUNCTIONAL_SNP rs10787316 chr10 113032991 Intergenic 7 9102 CEU:1.0;0.802, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7911807 chr10 113024407 Intergenic 7 17686 CEU:1.0;0.802, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.892;0.718 LEAD_SNP rs7342028 chr10 114479262 Intron 6 ASSOCIATION 21076409 Ventricular conduction 9.30102999566 VTI1A FUNCTIONAL_SNP rs7923254 chr10 114476813 Intron 4 2449 CEU:1.0;0.856, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11196083 chr10 114500004 Intron 5a 20742 CEU:1.0;0.861 FUNCTIONAL_SNP rs7068695 chr10 114516373 Intron 5b 37111 CEU:0.95;0.821, JPT:0.74;0.522 FUNCTIONAL_SNP rs7907540 chr10 114468438 Intron 5b 10824 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.909, YRI:1.0;0.718 FUNCTIONAL_SNP rs6585184 chr10 114514051 Intron 5b 34789 CEU:1.0;0.953, CHB:1.0;0.911, JPT:1.0;0.867 FUNCTIONAL_SNP rs7918958 chr10 114475955 Intron 5b 3307 CEU:1.0;0.869, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11196066 chr10 114464159 Intron 6 15103 CEU:1.0;1.0, CHB:0.942;0.699, JPT:0.903;0.815, YRI:1.0;0.713 FUNCTIONAL_SNP rs7907361 chr10 114468137 Intron 6 11125 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.909 FUNCTIONAL_SNP rs7907012 chr10 114468116 Intron 6 11146 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.909 FUNCTIONAL_SNP rs7918405 chr10 114505465 Intron 6 26203 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;0.867 FUNCTIONAL_SNP rs6585173 chr10 114455827 Intron 6 23435 CEU:1.0;0.953, CHB:0.943;0.705, JPT:0.903;0.815 FUNCTIONAL_SNP rs7096151 chr10 114506292 Intron 6 27030 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;0.867 FUNCTIONAL_SNP rs7088368 chr10 114458929 Intron 6 20333 CEU:1.0;0.952, CHB:0.945;0.742, JPT:0.852;0.726 FUNCTIONAL_SNP rs7088500 chr10 114458969 Intron 6 20293 CEU:1.0;0.953, CHB:0.943;0.705, JPT:0.903;0.815 FUNCTIONAL_SNP rs10885378 chr10 114491924 Intron 7 12662 CEU:1.0;0.869, CHB:1.0;0.955, JPT:1.0;0.867 FUNCTIONAL_SNP rs7095631 chr10 114466843 Intron 7 12419 CEU:1.0;1.0 LEAD_SNP rs7901695 chr10 114754088 Intron 7 ASSOCIATION 21347282 Coronary heart disease 6.0 TCF7L2 ASSOCIATION 17463249 Type 2 diabetes 48.0 TCF7L2 FUNCTIONAL_SNP rs4506565 chr10 114756041 Intron 7 1953 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4506565 chr10 114756041 Intron 7 ASSOCIATION 20081858 Fasting glucose-related traits 8.0 TCF7L2 ASSOCIATION 17554300 Type 2 diabetes 11.3010299957 TCF7L2 FUNCTIONAL_SNP rs4132670 chr10 114767771 Intron 4 11730 CEU:1.0;1.0 FUNCTIONAL_SNP rs7903146 chr10 114758349 Intron 5b 2308 CEU:1.0;0.897, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7074440 chr10 114785424 Intron 6 29383 CEU:1.0;0.847 FUNCTIONAL_SNP rs7901695 chr10 114754088 Intron 7 1953 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7903146 chr10 114758349 Intron 5b ASSOCIATION 20849430 Glycated hemoglobin levels 7.0 TCF7L2 ASSOCIATION 20694148 Metabolic syndrome 6.15490195999 TCF7L2 ASSOCIATION 20581827 Type 2 diabetes 50.6989700043 TCF7L2 ASSOCIATION 19734900 Type 2 diabetes and other traits 30.0 TCF7L2 ASSOCIATION 19401414 Type 2 diabetes 11.096910013 TCF7L2 ASSOCIATION 19056611 Type 2 diabetes 29.0457574906 TCF7L2 ASSOCIATION 19056611 Type 2 diabetes 15.2218487496 TCF7L2 ASSOCIATION 18372903 Type 2 diabetes 22.5228787453 TCF7L2 ASSOCIATION 17668382 Type 2 diabetes 7.30102999566 TCF7L2 ASSOCIATION 17463246 Type 2 diabetes 30.6989700043 TCF7L2 ASSOCIATION 17463248 Type 2 diabetes 8.0 TCF7L2 ASSOCIATION 17460697 Type 2 diabetes 9.69897000434 TCF7L2 ASSOCIATION 17293876 Type 2 diabetes 33.6989700043 TCF7L2 FUNCTIONAL_SNP rs4132670 chr10 114767771 Intron 4 9422 CEU:1.0;0.897 FUNCTIONAL_SNP rs7074440 chr10 114785424 Intron 6 27075 CEU:1.0;0.945 FUNCTIONAL_SNP rs4506565 chr10 114756041 Intron 7 2308 CEU:1.0;0.897, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7901695 chr10 114754088 Intron 7 4261 CEU:0.943;0.841, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs12243326 chr10 114788815 Intron 7 ASSOCIATION 20081857 Two-hour glucose challenge 7.0 TCF7L2 FUNCTIONAL_SNP rs7074440 chr10 114785424 Intron 6 3391 CEU:1.0;0.832, JPT:1.0;1.0 FUNCTIONAL_SNP rs12255372 chr10 114808902 Intron 7 20087 CEU:1.0;0.939, JPT:1.0;1.0, YRI:0.841;0.614 LEAD_SNP rs4751674 chr10 116139029 Intron 5a ASSOCIATION 20125193 Cognitive test performance 5.39794000867 AFAP1L2 LEAD_SNP rs10490919 chr10 117512588 Intron 6 ASSOCIATION 21130836 Information processing speed 5.69897000434 ATRNL1 FUNCTIONAL_SNP rs1157117 chr10 117532391 Intron 4 19803 CEU:0.958;0.919, CHB:1.0;0.641, JPT:0.856;0.684, YRI:0.855;0.569 FUNCTIONAL_SNP rs1007581 chr10 117585986 Intron 5b 73398 CEU:0.918;0.811, CHB:1.0;0.835, JPT:0.934;0.872 FUNCTIONAL_SNP rs10885810 chr10 117533271 Intron 6 20683 CEU:0.959;0.883, CHB:1.0;0.564, JPT:0.929;0.76, YRI:0.798;0.637 FUNCTIONAL_SNP rs10885797 chr10 117488726 Intron 6 23862 CEU:0.958;0.882, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs10885801 chr10 117509042 Intron 6 3546 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1547948 chr10 117547453 Intron 6 34865 CEU:0.92;0.847, CHB:1.0;0.783, JPT:1.0;0.935 FUNCTIONAL_SNP rs11197429 chr10 117504951 Intron 6 7637 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6585362 chr10 117543703 Intron 7 31115 CEU:0.92;0.847, CHB:1.0;0.888, JPT:1.0;0.935 FUNCTIONAL_SNP rs10490916 chr10 117548240 Intron 7 35652 CEU:0.92;0.847, CHB:1.0;0.888, JPT:0.934;0.872 FUNCTIONAL_SNP rs961155 chr10 117579165 Intron 7 66577 CEU:0.948;0.817, CHB:1.0;0.823, JPT:1.0;0.931 FUNCTIONAL_SNP rs2804161 chr10 117489278 Intron 7 23310 CEU:0.959;0.885, CHB:1.0;0.945, JPT:1.0;0.935 FUNCTIONAL_SNP rs2243740 chr10 117487968 Intron 7 24620 CEU:0.92;0.847, CHB:1.0;0.893, JPT:1.0;0.935 FUNCTIONAL_SNP rs991389 chr10 117546376 Intron 7 33788 CEU:0.92;0.847, CHB:1.0;0.887, JPT:0.934;0.872 FUNCTIONAL_SNP rs10885799 chr10 117504849 Intron 7 7739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.826 FUNCTIONAL_SNP rs9332403 chr10 117548490 Intron 7 35902 CEU:0.92;0.847, CHB:1.0;0.888, JPT:0.934;0.872 FUNCTIONAL_SNP rs10787599 chr10 117548207 Intron 7 35619 CEU:0.954;0.87, CHB:1.0;0.888, JPT:0.933;0.871 FUNCTIONAL_SNP rs4600124 chr10 117495977 Intron 7 16611 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;1.0 FUNCTIONAL_SNP rs2960715 chr10 117520997 Intron 7 8409 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2532709 chr10 117497003 Intron 7 15585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2420109 chr10 117487861 Intron 7 24727 CEU:0.92;0.847, CHB:1.0;0.893, JPT:1.0;0.873, YRI:1.0;0.94 FUNCTIONAL_SNP rs2420110 chr10 117494113 Intron 7 18475 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2420111 chr10 117522861 Intron 7 10273 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs2804160 chr10 117488752 Intron 7 23836 CEU:0.959;0.883, CHB:1.0;0.889, JPT:0.934;0.872 LEAD_SNP rs740363 chr10 118575606 Intergenic 5b ASSOCIATION 17903304 Heart failure 5.04575749056 RPL5P27 - ENO4 FUNCTIONAL_SNP rs1626678 chr10 118576146 Intergenic 7 540 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 LEAD_SNP rs7078160 chr10 118827560 Intron 6 ASSOCIATION 20023658 Nonsyndromic cleft lip with or without cleft palate 7.69897000434 KIAA1598 - VAX1 FUNCTIONAL_SNP rs1898357 chr10 118834301 Intron 3a 6741 CEU:1.0;0.918, CHB:1.0;0.544, JPT:1.0;0.612 FUNCTIONAL_SNP rs10886040 chr10 118846294 Intron 4 18734 CEU:1.0;1.0, CHB:0.952;0.907, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1865954 chr10 118837778 Intron 4 10218 CEU:1.0;0.923, CHB:1.0;0.57, JPT:1.0;0.588 FUNCTIONAL_SNP rs1865955 chr10 118837990 Intron 4 10430 CEU:1.0;0.923, CHB:1.0;0.57, JPT:1.0;0.588 FUNCTIONAL_SNP rs7078823 chr10 118885780 Intron 5b 58220 CEU:1.0;0.846 FUNCTIONAL_SNP rs11197899 chr10 118861724 Intron 5b 34164 CEU:1.0;1.0, CHB:0.952;0.907, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10128516 chr10 118781041 Intron 6 46519 CEU:1.0;0.923, CHB:1.0;0.598, JPT:1.0;0.588 FUNCTIONAL_SNP rs7094283 chr10 118818549 Intron 6 9011 CEU:1.0;0.923, CHB:1.0;0.598, JPT:1.0;0.588 FUNCTIONAL_SNP rs10886029 chr10 118796012 Intron 6 31548 CEU:1.0;0.923, CHB:1.0;0.598, JPT:1.0;0.588 FUNCTIONAL_SNP rs10787746 chr10 118809909 Intron 6 17651 CEU:1.0;0.923, CHB:1.0;0.57 FUNCTIONAL_SNP rs2118206 chr10 118820500 Intron 6 7060 CEU:1.0;0.923, CHB:1.0;0.598, JPT:1.0;0.588 FUNCTIONAL_SNP rs6585426 chr10 118852468 Intron 6 24908 CEU:1.0;0.923, CHB:1.0;0.57, JPT:1.0;0.562 FUNCTIONAL_SNP rs11197887 chr10 118836682 Intron 6 9122 CEU:1.0;1.0, CHB:1.0;0.639, YRI:1.0;0.902 FUNCTIONAL_SNP rs1898354 chr10 118828204 Intron 6 644 CEU:1.0;0.923, CHB:1.0;0.57, JPT:1.0;0.588 FUNCTIONAL_SNP rs10787753 chr10 118829684 Intron 6 2124 CEU:1.0;0.923, CHB:1.0;0.57, JPT:1.0;0.588 FUNCTIONAL_SNP rs10886031 chr10 118804993 Intron 7 22567 CEU:1.0;0.922, CHB:1.0;0.598, JPT:1.0;0.58 FUNCTIONAL_SNP rs10886037 chr10 118831210 Intron 7 3650 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3858326 chr10 118848632 Intron 7 21072 CEU:1.0;0.923, CHB:1.0;0.57, JPT:1.0;0.588 FUNCTIONAL_SNP rs4752028 chr10 118834991 Intron 7 7431 CEU:1.0;1.0 FUNCTIONAL_SNP rs10787744 chr10 118800913 Intron 7 26647 CEU:1.0;0.923, CHB:1.0;0.598, JPT:1.0;0.588 FUNCTIONAL_SNP rs3847479 chr10 118833263 Intron 7 5703 CEU:1.0;0.923, CHB:1.0;0.554, JPT:1.0;0.588 FUNCTIONAL_SNP rs10510026 chr10 118862420 Intron 7 34860 CEU:1.0;1.0, CHB:0.952;0.907, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10510027 chr10 118869607 Intron 7 42047 CEU:1.0;0.923, CHB:1.0;0.57, JPT:1.0;0.588 FUNCTIONAL_SNP rs2420308 chr10 118831806 Intron 7 4246 CEU:1.0;0.922, CHB:0.929;0.51, JPT:1.0;0.588 FUNCTIONAL_SNP rs10787751 chr10 118826441 Intron 7 1119 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;0.953 FUNCTIONAL_SNP rs1898351 chr10 118815056 Intron 7 12504 CEU:1.0;0.923, CHB:1.0;0.598, JPT:1.0;0.588 FUNCTIONAL_SNP rs1898355 chr10 118828369 Intron 7 809 CEU:1.0;0.923, CHB:1.0;0.57, JPT:1.0;0.588 FUNCTIONAL_SNP rs10886038 chr10 118833487 Intron 7 5927 CEU:1.0;0.918, CHB:1.0;0.57, JPT:1.0;0.588 LEAD_SNP rs2184898 chr10 119418104 Intergenic 5a ASSOCIATION 20585324 Conduct disorder (case status) 5.52287874528 EMX2 - RAB11FIP2 LEAD_SNP rs2234962 chr10 121429633 Coding 5b ASSOCIATION 21459883 Dilated cardiomyopathy 11.3979400087 BAG3 FUNCTIONAL_SNP rs17099139 chr10 121419487 Intron 2b 10146 CEU:0.945;0.893 FUNCTIONAL_SNP rs17617337 chr10 121426884 Intron 5b 2749 CEU:1.0;0.948 LEAD_SNP rs2901286 chr10 122900623 Intergenic 5a ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 5.39794000867 RPL19P16 - FGFR2 LEAD_SNP rs10788160 chr10 123033549 Intergenic 6 ASSOCIATION 21160077 Serum prostate-specific antigen levels 14.3010299957 RPL19P16 - FGFR2 FUNCTIONAL_SNP rs12413088 chr10 123052728 Intergenic 5b 19179 CEU:0.939;0.831, CHB:1.0;0.51, JPT:1.0;0.729 FUNCTIONAL_SNP rs10886886 chr10 123030869 Intergenic 5b 2680 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10886903 chr10 123049435 Intergenic 5b 15886 CEU:0.94;0.834, CHB:1.0;0.924, JPT:1.0;1.0 FUNCTIONAL_SNP rs11199879 chr10 123045212 Intergenic 6 11663 CEU:0.94;0.833, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11199881 chr10 123045870 Intergenic 6 12321 CEU:0.94;0.833, CHB:1.0;0.753 FUNCTIONAL_SNP rs4465316 chr10 123034181 Intergenic 6 632 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0 FUNCTIONAL_SNP rs10788163 chr10 123039802 Intergenic 6 6253 CEU:0.939;0.831, CHB:1.0;0.753, JPT:1.0;0.522 FUNCTIONAL_SNP rs10886887 chr10 123033178 Intergenic 6 371 CEU:1.0;0.945, CHB:1.0;0.753, JPT:1.0;0.522 FUNCTIONAL_SNP rs12146156 chr10 123024416 Intergenic 6 9133 CEU:0.938;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11199868 chr10 123028339 Intergenic 6 5210 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;0.845 FUNCTIONAL_SNP rs7915008 chr10 123025225 Intergenic 7 8324 CEU:0.942;0.887, CHB:1.0;0.753, JPT:1.0;0.522 FUNCTIONAL_SNP rs11199872 chr10 123031190 Intergenic 7 2359 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;0.845 FUNCTIONAL_SNP rs11199874 chr10 123032519 Intergenic 7 1030 CEU:1.0;0.945, CHB:1.0;0.753, JPT:1.0;0.522 FUNCTIONAL_SNP rs4393247 chr10 123028176 Intergenic 7 5373 CEU:0.938;0.88, CHB:1.0;0.75, JPT:1.0;0.569 FUNCTIONAL_SNP rs4468286 chr10 123034391 Intergenic 7 842 CEU:1.0;0.945, CHB:1.0;0.753, JPT:1.0;0.522 FUNCTIONAL_SNP rs12761612 chr10 123031410 Intergenic 7 2139 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;0.738 FUNCTIONAL_SNP rs12413648 chr10 123038897 Intergenic 7 5348 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12146366 chr10 123024680 Intergenic 7 8869 CEU:0.942;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10886885 chr10 123030481 Intergenic 7 3068 CEU:0.942;0.887, CHB:1.0;0.753, JPT:1.0;0.522 FUNCTIONAL_SNP rs11199869 chr10 123030065 Intergenic 7 3484 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11199871 chr10 123030950 Intergenic 7 2599 CEU:0.942;0.887, CHB:1.0;0.753, JPT:1.0;0.522 LEAD_SNP rs2981579 chr10 123337335 Intron 5b ASSOCIATION 20453838 Breast cancer 30.3979400087 FGFR2 ASSOCIATION 19330030 Breast cancer 9.69897000434 FGFR2 FUNCTIONAL_SNP rs2981578 chr10 123340311 Intron 2b 2976 CEU:1.0;0.853, CHB:0.933;0.546, JPT:1.0;0.667 FUNCTIONAL_SNP rs2912774 chr10 123348662 Intron 5b 11327 CEU:1.0;1.0, CHB:0.78;0.527, JPT:0.877;0.69 FUNCTIONAL_SNP rs2912780 chr10 123337117 Intron 5b 218 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;0.791 FUNCTIONAL_SNP rs2162540 chr10 123352136 Intron 5b 14801 CEU:1.0;1.0, CHB:0.883;0.614, JPT:0.929;0.65, YRI:0.819;0.53 FUNCTIONAL_SNP rs2981582 chr10 123352317 Intron 5b 14982 CEU:1.0;1.0, YRI:0.949;0.549 FUNCTIONAL_SNP rs10736303 chr10 123334457 Intron 5b 2878 CEU:1.0;0.853, CHB:1.0;0.57, JPT:1.0;0.667 FUNCTIONAL_SNP rs11200014 chr10 123334930 Intron 5b 2405 CEU:1.0;0.959 FUNCTIONAL_SNP rs1078806 chr10 123338975 Intron 5b 1640 CEU:1.0;1.0 FUNCTIONAL_SNP rs2936870 chr10 123348902 Intron 5b 11567 CEU:1.0;1.0, CHB:0.94;0.661, JPT:0.933;0.696 FUNCTIONAL_SNP rs2860197 chr10 123351302 Intron 6 13967 CEU:1.0;1.0, CHB:0.883;0.614, JPT:0.928;0.647 FUNCTIONAL_SNP rs2981575 chr10 123346116 Intron 6 8781 CEU:1.0;1.0, CHB:0.947;0.777, JPT:0.936;0.743 FUNCTIONAL_SNP rs1219648 chr10 123346190 Intron 7 8855 CEU:1.0;1.0, CHB:0.94;0.661, JPT:0.933;0.696 FUNCTIONAL_SNP rs2420946 chr10 123351324 Intron 7 13989 CEU:1.0;0.961, CHB:0.883;0.614, JPT:0.929;0.65 LEAD_SNP rs2981575 chr10 123346116 Intron 6 ASSOCIATION 21060860 Breast cancer 8.0 FGFR2 FUNCTIONAL_SNP rs2981578 chr10 123340311 Intron 2b 5805 CEU:1.0;0.853, JPT:1.0;0.565 FUNCTIONAL_SNP rs2912774 chr10 123348662 Intron 5b 2546 CEU:1.0;1.0, CHB:0.799;0.638, JPT:0.94;0.836, YRI:1.0;1.0 FUNCTIONAL_SNP rs2912780 chr10 123337117 Intron 5b 8999 CEU:1.0;1.0, CHB:0.938;0.681, JPT:0.925;0.637 FUNCTIONAL_SNP rs2981579 chr10 123337335 Intron 5b 8781 CEU:1.0;1.0, CHB:0.947;0.777, JPT:0.936;0.743 FUNCTIONAL_SNP rs2162540 chr10 123352136 Intron 5b 6020 CEU:1.0;1.0, CHB:0.893;0.724, JPT:0.935;0.778, YRI:0.909;0.654 FUNCTIONAL_SNP rs2981582 chr10 123352317 Intron 5b 6201 CEU:1.0;1.0 FUNCTIONAL_SNP rs10736303 chr10 123334457 Intron 5b 11659 CEU:1.0;0.853, JPT:1.0;0.565 FUNCTIONAL_SNP rs1078806 chr10 123338975 Intron 5b 7141 CEU:1.0;1.0 FUNCTIONAL_SNP rs11200014 chr10 123334930 Intron 5b 11186 CEU:1.0;0.959 FUNCTIONAL_SNP rs2936870 chr10 123348902 Intron 5b 2786 CEU:1.0;1.0, CHB:0.945;0.771, JPT:0.939;0.832, YRI:1.0;1.0 FUNCTIONAL_SNP rs2860197 chr10 123351302 Intron 6 5186 CEU:1.0;1.0, CHB:0.893;0.724, JPT:0.935;0.776, YRI:0.917;0.808 FUNCTIONAL_SNP rs1219648 chr10 123346190 Intron 7 74 CEU:1.0;1.0, CHB:0.945;0.771, JPT:0.939;0.832 FUNCTIONAL_SNP rs2420946 chr10 123351324 Intron 7 5208 CEU:1.0;0.961, CHB:0.893;0.724, JPT:0.935;0.778, YRI:0.912;0.736 LEAD_SNP rs1219648 chr10 123346190 Intron 7 ASSOCIATION 21263130 Breast cancer 30.0 FGFR2 ASSOCIATION 20872241 Breast cancer 12.6989700043 FGFR2 ASSOCIATION 17529973 Breast cancer 10.0 FGFR2 FUNCTIONAL_SNP rs2981578 chr10 123340311 Intron 2b 5879 CEU:1.0;0.853, JPT:1.0;0.533 FUNCTIONAL_SNP rs2912774 chr10 123348662 Intron 5b 2472 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;0.892 FUNCTIONAL_SNP rs2912780 chr10 123337117 Intron 5b 9073 CEU:1.0;1.0, CHB:0.93;0.569, JPT:0.916;0.549 FUNCTIONAL_SNP rs2981579 chr10 123337335 Intron 5b 8855 CEU:1.0;1.0, CHB:0.94;0.661, JPT:0.933;0.696 FUNCTIONAL_SNP rs2162540 chr10 123352136 Intron 5b 5946 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.943, YRI:0.95;0.539 FUNCTIONAL_SNP rs2981582 chr10 123352317 Intron 5b 6127 CEU:1.0;1.0, CHB:0.933;0.637, JPT:1.0;0.588 FUNCTIONAL_SNP rs10736303 chr10 123334457 Intron 5b 11733 CEU:1.0;0.853, JPT:1.0;0.533 FUNCTIONAL_SNP rs11200014 chr10 123334930 Intron 5b 11260 CEU:1.0;0.959, CHB:1.0;0.58, JPT:0.839;0.514 FUNCTIONAL_SNP rs1078806 chr10 123338975 Intron 5b 7215 CEU:1.0;1.0, CHB:1.0;0.58 FUNCTIONAL_SNP rs2936870 chr10 123348902 Intron 5b 2712 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2860197 chr10 123351302 Intron 6 5112 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.942 FUNCTIONAL_SNP rs2981575 chr10 123346116 Intron 6 74 CEU:1.0;1.0, CHB:0.945;0.771, JPT:0.939;0.832 FUNCTIONAL_SNP rs2420946 chr10 123351324 Intron 7 5134 CEU:1.0;0.961, CHB:1.0;0.952, JPT:1.0;0.943 LEAD_SNP rs2981582 chr10 123352317 Intron 5b ASSOCIATION 17529967 Breast cancer 75.6989700043 FGFR2 LEAD_SNP rs10510102 chr10 123625190 Intron 5b ASSOCIATION 21263130 Breast cancer 5.69897000434 ATE1 FUNCTIONAL_SNP rs11200222 chr10 123650692 Intron 4 25502 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200223 chr10 123650931 Intron 4 25741 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200237 chr10 123660230 Intron 4 35040 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3862129 chr10 123583975 Intron 5a 41215 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.761 FUNCTIONAL_SNP rs12245528 chr10 123640521 Intron 5b 15331 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7906462 chr10 123707613 Intron 5b 82423 CEU:1.0;0.927, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs11200201 chr10 123624305 Intron 5b 885 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs11200258 chr10 123677907 Intron 5b 52717 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.927 FUNCTIONAL_SNP rs10510101 chr10 123658129 Intron 5b 32939 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10887013 chr10 123651061 Intron 5b 25871 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10887032 chr10 123715402 Intergenic 5b 90212 CEU:1.0;0.927, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs6585764 chr10 123596823 Intron 5b 28367 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;0.685 FUNCTIONAL_SNP rs12257207 chr10 123701252 Intron 5b 76062 CEU:1.0;0.927, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs7906271 chr10 123707722 Intron 5b 82532 CEU:1.0;0.927, CHB:1.0;0.824, JPT:0.898;0.58 FUNCTIONAL_SNP rs11818001 chr10 123644345 Intron 6 19155 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7907871 chr10 123637700 Intron 6 12510 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12253283 chr10 123669255 Intron 6 44065 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;0.927 FUNCTIONAL_SNP rs12255832 chr10 123718277 Intron 6 93087 CEU:1.0;0.927, CHB:0.9;0.737 FUNCTIONAL_SNP rs12255859 chr10 123591176 Intron 6 34014 CEU:1.0;0.811 FUNCTIONAL_SNP rs12258426 chr10 123641704 Intron 6 16514 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200277 chr10 123703810 Intron 6 78620 CEU:1.0;0.927, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs11200187 chr10 123602565 Intron 6 22625 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.867 FUNCTIONAL_SNP rs12247749 chr10 123643711 Intron 6 18521 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7921873 chr10 123641251 Intron 6 16061 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200213 chr10 123642743 Intron 6 17553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200217 chr10 123645887 Intron 6 20697 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200228 chr10 123652873 Intron 6 27683 CEU:1.0;0.917 FUNCTIONAL_SNP rs11818735 chr10 123651987 Intron 6 26797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200257 chr10 123676747 Intron 6 51557 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.927 FUNCTIONAL_SNP rs11200260 chr10 123679684 Intron 6 54494 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.927 FUNCTIONAL_SNP rs11200297 chr10 123732431 Intron 6 107241 CEU:1.0;0.855, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs10887012 chr10 123649969 Intron 6 24779 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12244199 chr10 123724632 Intron 6 99442 CEU:1.0;0.927, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs12265369 chr10 123727970 Intron 6 102780 CEU:1.0;0.855, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs9630107 chr10 123647228 Intron 6 22038 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200240 chr10 123662780 Intron 6 37590 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.927 FUNCTIONAL_SNP rs12240306 chr10 123722906 Intron 6 97716 CEU:1.0;0.927, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs7098822 chr10 123661672 Intron 6 36482 CEU:1.0;1.0 FUNCTIONAL_SNP rs12244951 chr10 123656394 Intron 6 31204 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7907815 chr10 123725466 Intron 6 100276 CEU:1.0;0.927, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs12261371 chr10 123726201 Intron 6 101011 CEU:1.0;0.922, CHB:1.0;0.824, JPT:1.0;0.639 FUNCTIONAL_SNP rs7076882 chr10 123706554 Intron 7 81364 CEU:1.0;0.921, CHB:0.881;0.696, JPT:1.0;0.642 FUNCTIONAL_SNP rs12245018 chr10 123645710 Intron 7 20520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12266597 chr10 123645577 Intron 7 20387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12246693 chr10 123716888 Intron 7 91698 CEU:1.0;0.912, CHB:1.0;0.824, JPT:1.0;0.571 FUNCTIONAL_SNP rs7098562 chr10 123661663 Intron 7 36473 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12246728 chr10 123726133 Intron 7 100943 CEU:1.0;0.927, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs11200203 chr10 123633529 Intron 7 8339 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200218 chr10 123645925 Intron 7 20735 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200220 chr10 123649464 Intron 7 24274 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200221 chr10 123649649 Intron 7 24459 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200226 chr10 123651503 Intron 7 26313 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200229 chr10 123653034 Intron 7 27844 CEU:1.0;1.0, CHB:1.0;0.796, JPT:1.0;0.885 FUNCTIONAL_SNP rs11200230 chr10 123654632 Intron 7 29442 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11200244 chr10 123666459 Intron 7 41269 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.927 FUNCTIONAL_SNP rs11200253 chr10 123674629 Intron 7 49439 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.927 FUNCTIONAL_SNP rs11200267 chr10 123689366 Intron 7 64176 CEU:1.0;0.918, CHB:0.88;0.695, JPT:1.0;0.657 FUNCTIONAL_SNP rs11814703 chr10 123724289 Intron 7 99099 CEU:1.0;0.926, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs10886994 chr10 123600590 Intron 7 24600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.868 FUNCTIONAL_SNP rs10887003 chr10 123624175 Intron 7 1015 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.584 FUNCTIONAL_SNP rs10887010 chr10 123648057 Intron 7 22867 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10887011 chr10 123649718 Intron 7 24528 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10887018 chr10 123653972 Intron 7 28782 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7076727 chr10 123706515 Intron 7 81325 CEU:1.0;0.926, CHB:1.0;0.755, JPT:0.871;0.554 FUNCTIONAL_SNP rs7920024 chr10 123703578 Intron 7 78388 CEU:1.0;0.922, CHB:1.0;0.739, JPT:1.0;0.594 FUNCTIONAL_SNP rs10466217 chr10 123619877 Intron 7 5313 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3750837 chr10 123658595 Intron 7 33405 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11498944 chr10 123698263 Intron 7 73073 CEU:1.0;0.927, CHB:1.0;0.824, JPT:1.0;0.657 FUNCTIONAL_SNP rs7923678 chr10 123592061 Intron 7 33129 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;0.93 FUNCTIONAL_SNP rs12240893 chr10 123630087 Intron 7 4897 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs6585827 chr10 124165615 Intron 5a ASSOCIATION 20189936 Height 5.69897000434 PLEKHA1 FUNCTIONAL_SNP rs10887150 chr10 124180578 Exon,non-coding 7 14963 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs7079976 chr10 124172108 Exon,non-coding 7 6493 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7097701 chr10 124171857 Exon,non-coding 7 6242 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.963 FUNCTIONAL_SNP rs11200594 chr10 124139393 Intron 6 26222 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.89 FUNCTIONAL_SNP rs7072204 chr10 124195485 Intergenic 7 29870 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.925 FUNCTIONAL_SNP rs4146894 chr10 124155381 Intron 7 10234 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs11200604 chr10 124147639 Intron 7 17976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:0.957;0.879 FUNCTIONAL_SNP rs2292626 chr10 124186714 Intron 7 21099 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs11200629 chr10 124198585 Intergenic 7 32970 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.91 FUNCTIONAL_SNP rs4612730 chr10 124176452 Intron 7 10837 CEU:1.0;0.902, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 LEAD_SNP rs10490924 chr10 124214448 Coding 7 ASSOCIATION 21665990 Age-related macular degeneration 322.602059991 ARMS2 ASSOCIATION 20861866 Age-related macular degeneration 60.0 ARMS2 ASSOCIATION 20385826 Age-related macular degeneration 118.301029996 ARMS2 FUNCTIONAL_SNP rs932275 chr10 124231464 Intron 4 17016 CEU:1.0;1.0, CHB:0.889;0.656, JPT:1.0;0.786 FUNCTIONAL_SNP rs2284665 chr10 124226630 Intron 5b 12182 CEU:1.0;1.0, CHB:1.0;0.87, JPT:1.0;0.865 FUNCTIONAL_SNP rs3793917 chr10 124219275 Intergenic 5b 4827 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.902, YRI:0.91;0.793 FUNCTIONAL_SNP rs3750848 chr10 124215315 Intron 7 867 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3750847 chr10 124215421 Intron 7 973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3793917 chr10 124219275 Intergenic 5b ASSOCIATION 20385819 Age-related macular degeneration 59.3979400087 HTRA1 FUNCTIONAL_SNP rs10490924 chr10 124214448 Coding 7 4827 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.902, YRI:0.91;0.793 FUNCTIONAL_SNP rs932275 chr10 124231464 Intron 4 12189 CEU:1.0;1.0, CHB:0.886;0.648, JPT:1.0;0.859, YRI:0.73;0.511 FUNCTIONAL_SNP rs2284665 chr10 124226630 Intron 5b 7355 CEU:1.0;1.0, CHB:1.0;0.867, JPT:1.0;0.95 FUNCTIONAL_SNP rs3750848 chr10 124215315 Intron 7 3960 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.902, YRI:0.91;0.793 FUNCTIONAL_SNP rs3750847 chr10 124215421 Intron 7 3854 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.902, YRI:0.91;0.793 LEAD_SNP rs11200638 chr10 124220544 Intergenic 5b ASSOCIATION 17053108 Age-related macular degeneration (wet) 11.096910013 HTRA1 LEAD_SNP rs4962416 chr10 126696872 Intron 5b ASSOCIATION 18264096 Prostate cancer 6.69897000434 CTBP2 LEAD_SNP rs4363506 chr10 129274503 Intergenic 7 ASSOCIATION 17362836 Amyotrophic lateral sclerosis 6.15490195999 FAM196A - NPS FUNCTIONAL_SNP rs949523 chr10 129283431 Intergenic 5b 8928 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.873 FUNCTIONAL_SNP rs10741273 chr10 129271508 Intergenic 5b 2995 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10765112 chr10 129273059 Intergenic 5b 1444 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10830092 chr10 129273898 Intergenic 7 605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10830090 chr10 129273673 Intergenic 7 830 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs4363507 chr10 129274942 Intergenic 7 439 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2387326 chr10 129933456 Intergenic 6 ASSOCIATION 17903293 Select biomarker traits 6.0 MKI67 - MGMT FUNCTIONAL_SNP rs945221 chr10 129932954 Intergenic 4 502 CEU:1.0;1.0, CHB:1.0;0.822, JPT:1.0;0.828, YRI:1.0;0.949 LEAD_SNP rs11818629 chr10 130137105 Intergenic 6 ASSOCIATION 20041166 HIV-1 control 5.52287874528 MKI67 - MGMT LEAD_SNP rs9804317 chr10 130248926 Intergenic 6 ASSOCIATION 20125193 Cognitive test performance 5.15490195999 MKI67 - MGMT FUNCTIONAL_SNP rs11016249 chr10 130248338 Intergenic 6 588 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.903 FUNCTIONAL_SNP rs11016248 chr10 130248247 Intergenic 7 679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4751178 chr10 131992245 Intergenic 5b ASSOCIATION 19786962 Speech perception in dyslexia 5.15490195999 GLRX3 - TCERG1L LEAD_SNP rs4751185 chr10 132056415 Intergenic 7 ASSOCIATION 21160409 HIV-1 susceptibility 5.15490195999 GLRX3 - TCERG1L LEAD_SNP rs10741243 chr10 132947962 Intron 7 ASSOCIATION 21490949 Type 2 diabetes 5.30102999566 TCERG1L FUNCTIONAL_SNP rs1891801 chr10 132941219 Intron 2b 6743 CEU:1.0;1.0, CHB:1.0;0.889, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7081792 chr10 132948840 Intron 5b 878 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs2996077 chr10 132952038 Intron 7 4076 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs4436470 chr10 132949056 Intron 7 1094 CEU:1.0;0.849, CHB:1.0;1.0, JPT:0.914;0.835, YRI:1.0;1.0 LEAD_SNP rs11602954 chr11 202856 Intron 5b ASSOCIATION 19820697 Mean platelet volume 14.0 BET1L FUNCTIONAL_SNP rs11606393 chr11 208235 Exon,non-coding 4 5379 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs939915 chr11 237737 Intron 4 34881 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11601356 chr11 249131 Intron 5a 46275 CEU:0.942;0.887, CHB:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs535716 chr11 218640 Intron 5b 15784 CEU:0.942;0.886, CHB:1.0;1.0 FUNCTIONAL_SNP rs505404 chr11 243268 Intron 6 40412 CEU:1.0;0.944, CHB:1.0;1.0 FUNCTIONAL_SNP rs17655188 chr11 249408 Intron 7 46552 CEU:0.936;0.824, CHB:1.0;1.0 LEAD_SNP rs2280543 chr11 203788 Exon,non-coding 5b ASSOCIATION 21460842 Uterine fibroids 11.3979400087 BET1L FUNCTIONAL_SNP rs11245997 chr11 204680 Exon,non-coding 4 892 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12226697 chr11 216056 Exon,non-coding 4 12268 CEU:1.0;1.0, CHB:0.913;0.833, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs11245990 chr11 202565 Intron 5a 1223 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11246002 chr11 211447 Intron 5b 7659 CEU:1.0;1.0, CHB:0.914;0.835, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3782121 chr11 205935 Intron 5b 2147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4963128 chr11 589564 Intron 5b ASSOCIATION 21408207 Systemic lupus erythematosus 5.39794000867 PHRF1 ASSOCIATION 18204446 Systemic lupus erythematosus 9.52287874528 PHRF1 LEAD_SNP rs907611 chr11 1874072 Intergenic 2a ASSOCIATION 21297633 Ulcerative colitis 10.0 LSP1 FUNCTIONAL_SNP rs907613 chr11 1874292 Exon,non-coding 4 220 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.919 FUNCTIONAL_SNP rs11041476 chr11 1875067 Intron 4 995 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0 LEAD_SNP rs3817198 chr11 1909006 Intron 5b ASSOCIATION 17529967 Breast cancer 8.52287874528 LSP1 LEAD_SNP rs909116 chr11 1941946 Intron 5b ASSOCIATION 20453838 Breast cancer 6.15490195999 TNNT3 LEAD_SNP rs3741208 chr11 2169774 Intron 5b ASSOCIATION 17554260 Type 1 diabetes 6.69897000434 IGF2;IGF2AS;INS-IGF2 LEAD_SNP rs1004446 chr11 2170143 Intron 5b ASSOCIATION 17632545 Type 1 diabetes 8.39794000867 IGF2;IGF2AS;INS-IGF2 FUNCTIONAL_SNP rs3741211 chr11 2169110 Intron 5b 1033 CEU:1.0;1.0, CHB:1.0;0.901, JPT:1.0;1.0, YRI:1.0;0.864 LEAD_SNP rs7111341 chr11 2213166 Intergenic 5b ASSOCIATION 19430480 Type 1 diabetes 47.3979400087 TH - ASCL2 LEAD_SNP rs7127900 chr11 2233574 Intergenic 5b ASSOCIATION 19767753 Prostate cancer 32.5228787453 TH - ASCL2 FUNCTIONAL_SNP rs7123299 chr11 2232344 Intergenic 2a 1230 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:1.0;0.647 FUNCTIONAL_SNP rs7395734 chr11 2231694 Intergenic 2b 1880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6579003 chr11 2232310 Intergenic 2b 1264 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.851 FUNCTIONAL_SNP rs11043135 chr11 2232696 Intergenic 2b 878 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs11043143 chr11 2234093 Intergenic 2b 519 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.884 FUNCTIONAL_SNP rs6579001 chr11 2232056 Intergenic 3a 1518 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs7121039 chr11 2232911 Intergenic 4 663 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4077456 chr11 2230152 Intergenic 4 3422 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.676 FUNCTIONAL_SNP rs4077457 chr11 2230354 Intergenic 4 3220 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.657 FUNCTIONAL_SNP rs4076054 chr11 2231341 Intergenic 4 2233 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10840603 chr11 2233797 Intergenic 4 223 CEU:1.0;0.905, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs10840606 chr11 2234690 Intergenic 4 1116 CEU:1.0;0.904 FUNCTIONAL_SNP rs6578999 chr11 2231774 Intergenic 4 1800 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;1.0, YRI:1.0;0.911 FUNCTIONAL_SNP rs6579002 chr11 2232229 Intergenic 4 1345 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.918 FUNCTIONAL_SNP rs11043132 chr11 2232624 Intergenic 4 950 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7123418 chr11 2232378 Intergenic 4 1196 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.877 FUNCTIONAL_SNP rs7123312 chr11 2232359 Intergenic 4 1215 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.882 FUNCTIONAL_SNP rs10743181 chr11 2229759 Intergenic 5b 3815 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.903;0.576 FUNCTIONAL_SNP rs10743182 chr11 2229782 Intergenic 5b 3792 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7481129 chr11 2230460 Intergenic 5b 3114 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7114836 chr11 2229012 Intergenic 5b 4562 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.633 FUNCTIONAL_SNP rs7126629 chr11 2228952 Intergenic 5b 4622 CEU:0.948;0.899, CHB:1.0;0.908, JPT:1.0;1.0, YRI:1.0;0.66 LEAD_SNP rs2074238 chr11 2484803 Intron 2a ASSOCIATION 19305408 QT interval 16.5228787453 KCNQ1 LEAD_SNP rs12296050 chr11 2489342 Intron 5b ASSOCIATION 20062063 Electrocardiographic traits 10.096910013 KCNQ1 ASSOCIATION 19305409 QT interval 16.5228787453 KCNQ1 FUNCTIONAL_SNP rs3864884 chr11 2482092 Intron 4 7250 CEU:1.0;0.939, CHB:0.952;0.906, JPT:1.0;0.773, YRI:0.959;0.766 FUNCTIONAL_SNP rs16928297 chr11 2486120 Intron 5b 3222 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.855, YRI:1.0;1.0 FUNCTIONAL_SNP rs7939542 chr11 2485486 Intron 5b 3856 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.658 FUNCTIONAL_SNP rs7951832 chr11 2480701 Intron 5b 8641 CEU:1.0;0.877, CHB:0.948;0.816, JPT:0.833;0.694 FUNCTIONAL_SNP rs7122937 chr11 2486550 Intron 5b 2792 CEU:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs16928285 chr11 2481140 Intron 5b 8202 CEU:1.0;0.939, CHB:0.952;0.906, JPT:0.88;0.663, YRI:0.959;0.766 FUNCTIONAL_SNP rs2074239 chr11 2485092 Intron 5b 4250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.663 LEAD_SNP rs12576239 chr11 2502319 Intron 4 ASSOCIATION 19305408 QT interval 15.0 KCNQ1 LEAD_SNP rs179429 chr11 2550730 Intron 7 ASSOCIATION 20526338 Platelet aggregation 5.15490195999 KCNQ1 FUNCTIONAL_SNP rs11823023 chr11 2552769 Intron 2b 2039 CEU:1.0;0.86, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs179428 chr11 2550509 Intron 5b 221 CEU:1.0;0.939, YRI:1.0;0.675 LEAD_SNP rs231362 chr11 2691471 Intron 7 ASSOCIATION 20581827 Type 2 diabetes 12.5228787453 KCNQ1 LEAD_SNP rs2237878 chr11 2766282 Intron 5b ASSOCIATION 18464913 Protein quantitative trait loci 6.0 KCNQ1 LEAD_SNP rs2237892 chr11 2839751 Intron 5b ASSOCIATION 21573907 Type 2 diabetes 5.39794000867 KCNQ1 ASSOCIATION 19401414 Type 2 diabetes 26.0 KCNQ1 ASSOCIATION 18711367 Type 2 diabetes 41.6989700043 KCNQ1 FUNCTIONAL_SNP rs7480855 chr11 2836085 Intron 5b 3666 CEU:1.0;1.0, CHB:1.0;0.906, JPT:1.0;0.863, YRI:1.0;0.704 FUNCTIONAL_SNP rs2283228 chr11 2849530 Intron 5b 9779 CEU:1.0;1.0, CHB:1.0;0.952, JPT:0.894;0.76, YRI:1.0;0.907 LEAD_SNP rs2237895 chr11 2857194 Intron 5b ASSOCIATION 20174558 Type 2 diabetes 9.0 KCNQ1 LEAD_SNP rs2237897 chr11 2858546 Intron 4 ASSOCIATION 18711366 Type 2 diabetes 16.0 KCNQ1 LEAD_SNP rs16928809 chr11 2936952 Intron 5b ASSOCIATION 19414484 Serum bilirubin levels 7.0 SLC22A18 LEAD_SNP rs3847646 chr11 2953723 Intergenic 5b ASSOCIATION 20705733 Serum calcium 5.30102999566 PHLDA2 - NAP1L4 LEAD_SNP rs739401 chr11 3036324 Intron 5a ASSOCIATION 20834067 Longevity 6.0 CARS LEAD_SNP rs11036238 chr11 5225635 Intergenic 7 ASSOCIATION 19465909 Malaria 10.3979400087 OR51V1 - HBB LEAD_SNP rs2071348 chr11 5264146 Intron 7 ASSOCIATION 20183929 Beta thalassemia/hemoglobin E disease 14.5228787453 HBBP1 FUNCTIONAL_SNP rs10128556 chr11 5263683 Intron 5a 463 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2855039 chr11 5271671 Intergenic 6 7525 CEU:0.951;0.904, CHB:1.0;0.92, JPT:1.0;0.823, YRI:1.0;1.0 LEAD_SNP rs4910742 chr11 5306509 Intron 5a ASSOCIATION 18245381 Fetal hemoglobin levels 21.0 HBE1 - OR51AB1P LEAD_SNP rs7932813 chr11 7708281 Intergenic 7 ASSOCIATION 19557197 Waist circumference 5.30102999566 CYB5R2 - OVCH2 FUNCTIONAL_SNP rs7110070 chr11 7707768 Intergenic 5a 513 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.963 FUNCTIONAL_SNP rs12271537 chr11 7707101 Intergenic 6 1180 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;0.946 FUNCTIONAL_SNP rs12274672 chr11 7706857 Intergenic 6 1424 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;1.0 FUNCTIONAL_SNP rs4758213 chr11 7705666 Intergenic 7 2615 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;0.924 LEAD_SNP rs12420464 chr11 8014777 Intron 7 ASSOCIATION 20800221 Depression--quantitative trait 5.52287874528 EIF3F LEAD_SNP rs110419 chr11 8252853 Intron 5b ASSOCIATION 21124317 Neuroblastoma 15.3010299957 LMO1 FUNCTIONAL_SNP rs3750952 chr11 8251921 Coding 5b 932 CEU:1.0;0.962, CHB:1.0;0.78, JPT:1.0;0.766 FUNCTIONAL_SNP rs4758317 chr11 8250811 Intron 2b 2042 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.95 FUNCTIONAL_SNP rs204926 chr11 8255106 Intron 4 2253 CEU:1.0;0.959, CHB:0.939;0.72, JPT:0.877;0.656 FUNCTIONAL_SNP rs204928 chr11 8254433 Intron 5b 1580 CEU:1.0;0.962, CHB:0.952;0.906, JPT:1.0;0.95 FUNCTIONAL_SNP rs110420 chr11 8253049 Intron 5b 196 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 LEAD_SNP rs10769908 chr11 8484089 Intron 6 ASSOCIATION 19079261 Body mass index 6.0 STK33 FUNCTIONAL_SNP rs2289921 chr11 8496611 Exon,non-coding 7 12522 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10769910 chr11 8499406 Intron 4 15317 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10840063 chr11 8522182 Intron 5a 38093 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10840062 chr11 8522147 Intron 5a 38058 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10840065 chr11 8526643 Intron 6 42554 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7939731 chr11 8510299 Intron 6 26210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10743076 chr11 8560571 Intron 6 76482 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2028882 chr11 8504854 Intron 6 20765 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10840056 chr11 8498064 Intron 6 13975 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10840060 chr11 8500045 Intron 6 15956 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs725502 chr11 8503743 Intron 6 19654 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10444316 chr11 8534614 Intron 7 50525 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs11041950 chr11 8515468 Intron 7 31379 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1900273 chr11 8483335 Intron 7 754 CEU:1.0;0.922, CHB:1.0;0.952, JPT:1.0;0.951, YRI:1.0;0.921 FUNCTIONAL_SNP rs7947670 chr11 8525531 Intron 7 41442 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs2871753 chr11 8486650 Intron 7 2561 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10444244 chr11 8534603 Intron 7 50514 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs10840051 chr11 8475180 Intron 7 8909 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.958 LEAD_SNP rs4929949 chr11 8604593 Intron 7 ASSOCIATION 20935630 Body mass index 8.52287874528 STK33 FUNCTIONAL_SNP rs749263 chr11 8413870 Exon,non-coding 5b 190723 CEU:1.0;0.834, CHB:0.83;0.623 FUNCTIONAL_SNP rs9300091 chr11 8588823 Exon,non-coding 6 15770 CEU:1.0;0.954, CHB:1.0;0.855, JPT:0.944;0.806 FUNCTIONAL_SNP rs2289921 chr11 8496611 Exon,non-coding 7 107982 CEU:1.0;0.953, CHB:1.0;0.859, JPT:0.95;0.903 FUNCTIONAL_SNP rs10769910 chr11 8499406 Intron 4 105187 CEU:1.0;0.955, CHB:1.0;0.859, JPT:0.952;0.906 FUNCTIONAL_SNP rs10840083 chr11 8608636 Intron 5a 4043 CEU:0.952;0.905, CHB:1.0;0.771, JPT:0.929;0.578 FUNCTIONAL_SNP rs10160430 chr11 8599876 Intron 5a 4717 CEU:1.0;0.951, CHB:1.0;0.897, JPT:0.943;0.889 FUNCTIONAL_SNP rs10840062 chr11 8522147 Intron 5a 82446 CEU:1.0;0.952, CHB:1.0;0.902, JPT:0.952;0.906 FUNCTIONAL_SNP rs10840063 chr11 8522182 Intron 5a 82411 CEU:1.0;0.912, CHB:1.0;0.859, JPT:0.952;0.906 FUNCTIONAL_SNP rs10769925 chr11 8623585 Intergenic 5b 18992 CEU:0.954;0.91, CHB:0.836;0.665, JPT:0.869;0.52 FUNCTIONAL_SNP rs7101471 chr11 8463622 Intron 5b 140971 CEU:1.0;0.953, CHB:1.0;0.813, JPT:0.948;0.9 FUNCTIONAL_SNP rs9736791 chr11 8589648 Intron 5b 14945 CEU:1.0;0.953, CHB:1.0;0.902, JPT:0.948;0.9 FUNCTIONAL_SNP rs4244804 chr11 8617550 Intergenic 5b 12957 CEU:0.952;0.905, CHB:0.832;0.657, JPT:0.863;0.524 FUNCTIONAL_SNP rs10840065 chr11 8526643 Intron 6 77950 CEU:1.0;0.953, CHB:1.0;0.856, JPT:0.948;0.9 FUNCTIONAL_SNP rs10840084 chr11 8609274 Intron 6 4681 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs1374262 chr11 8458749 Intron 6 145844 CEU:1.0;0.953, CHB:1.0;0.813, JPT:0.948;0.9 FUNCTIONAL_SNP rs9300092 chr11 8590492 Intron 6 14101 CEU:1.0;0.953, CHB:1.0;0.856, JPT:0.948;0.9 FUNCTIONAL_SNP rs9300093 chr11 8590825 Intron 6 13768 CEU:1.0;0.95, CHB:1.0;0.944, JPT:0.944;0.891 FUNCTIONAL_SNP rs7127684 chr11 8462719 Intron 6 141874 CEU:1.0;0.953, CHB:1.0;0.813, JPT:0.948;0.9 FUNCTIONAL_SNP rs7939731 chr11 8510299 Intron 6 94294 CEU:1.0;0.953, CHB:1.0;0.856, JPT:0.948;0.9 FUNCTIONAL_SNP rs11041978 chr11 8578150 Intron 6 26443 CEU:1.0;0.953, CHB:1.0;0.856, JPT:0.948;0.9 FUNCTIONAL_SNP rs11041994 chr11 8597866 Intron 6 6727 CEU:0.954;0.91, CHB:1.0;0.775, JPT:0.933;0.571 FUNCTIONAL_SNP rs10743076 chr11 8560571 Intron 6 44022 CEU:1.0;0.955, CHB:1.0;0.859, JPT:0.95;0.903 FUNCTIONAL_SNP rs2028882 chr11 8504854 Intron 6 99739 CEU:1.0;0.953, CHB:1.0;0.856, JPT:0.948;0.9 FUNCTIONAL_SNP rs4929942 chr11 8625096 Intergenic 6 20503 CEU:1.0;0.953, CHB:0.886;0.708, JPT:0.946;0.851 FUNCTIONAL_SNP rs4929943 chr11 8625354 Intergenic 6 20761 CEU:0.952;0.905, CHB:0.832;0.657, JPT:0.863;0.524 FUNCTIONAL_SNP rs7112153 chr11 8461178 Intron 6 143415 CEU:1.0;0.953, CHB:1.0;0.856, JPT:0.948;0.9 FUNCTIONAL_SNP rs10769916 chr11 8598214 Intron 6 6379 CEU:1.0;0.955, CHB:1.0;0.904, JPT:0.952;0.906 FUNCTIONAL_SNP rs10769908 chr11 8484089 Intron 6 120504 CEU:1.0;0.953, CHB:1.0;0.856, JPT:0.948;0.9 FUNCTIONAL_SNP rs725502 chr11 8503743 Intron 6 100850 CEU:1.0;0.953, CHB:1.0;0.856, JPT:0.948;0.9 FUNCTIONAL_SNP rs10840056 chr11 8498064 Intron 6 106529 CEU:1.0;0.955, CHB:1.0;0.859, JPT:0.952;0.906 FUNCTIONAL_SNP rs10769915 chr11 8597449 Intron 6 7144 CEU:1.0;0.955, CHB:1.0;0.904, JPT:0.949;0.901 FUNCTIONAL_SNP rs10840060 chr11 8500045 Intron 6 104548 CEU:1.0;0.953, CHB:1.0;0.856, JPT:0.947;0.896 FUNCTIONAL_SNP rs10840077 chr11 8601210 Intron 7 3383 CEU:1.0;0.954, CHB:1.0;0.904, JPT:0.95;0.903 FUNCTIONAL_SNP rs10444316 chr11 8534614 Intron 7 69979 CEU:0.95;0.903, CHB:1.0;0.856, JPT:0.951;0.904 FUNCTIONAL_SNP rs10840103 chr11 8682465 Intron 7 77872 CEU:1.0;0.827 FUNCTIONAL_SNP rs9737312 chr11 8585689 Intron 7 18904 CEU:0.954;0.91, CHB:1.0;0.731, JPT:0.933;0.571 FUNCTIONAL_SNP rs9300090 chr11 8585384 Intron 7 19209 CEU:1.0;0.913, CHB:1.0;0.859, JPT:0.952;0.906 FUNCTIONAL_SNP rs9705083 chr11 8586772 Intron 7 17821 CEU:0.954;0.91, CHB:1.0;0.735, JPT:0.931;0.563 FUNCTIONAL_SNP rs11041950 chr11 8515468 Intron 7 89125 CEU:1.0;0.95, CHB:1.0;0.899, JPT:1.0;0.941 FUNCTIONAL_SNP rs11041990 chr11 8585615 Intron 7 18978 CEU:0.952;0.905, CHB:1.0;0.731, JPT:0.927;0.569 FUNCTIONAL_SNP rs11041995 chr11 8598233 Intron 7 6360 CEU:0.953;0.908, CHB:1.0;0.775, JPT:0.933;0.593 FUNCTIONAL_SNP rs2311391 chr11 8431869 Intron 7 172724 CEU:1.0;0.831 FUNCTIONAL_SNP rs1900273 chr11 8483335 Intron 7 121258 CEU:1.0;0.865, CHB:0.942;0.798, JPT:0.944;0.846 FUNCTIONAL_SNP rs7108993 chr11 8447193 Intron 7 157400 CEU:1.0;0.827, CHB:0.825;0.614, JPT:0.932;0.635 FUNCTIONAL_SNP rs7947670 chr11 8525531 Intron 7 79062 CEU:1.0;0.949, CHB:0.943;0.842, JPT:0.944;0.845 FUNCTIONAL_SNP rs2871753 chr11 8486650 Intron 7 117943 CEU:1.0;0.954, CHB:1.0;0.859, JPT:0.95;0.903 FUNCTIONAL_SNP rs935370 chr11 8486846 Intron 7 117747 CEU:0.953;0.908, CHB:1.0;0.731, JPT:0.933;0.571 FUNCTIONAL_SNP rs10444244 chr11 8534603 Intron 7 69990 CEU:1.0;0.955, CHB:1.0;0.853, JPT:0.952;0.906 FUNCTIONAL_SNP rs10840047 chr11 8460897 Intron 7 143696 CEU:1.0;0.954, CHB:1.0;0.856, JPT:0.946;0.85 FUNCTIONAL_SNP rs10769905 chr11 8441716 Intron 7 162877 CEU:1.0;0.827, CHB:0.825;0.614, JPT:0.932;0.635 FUNCTIONAL_SNP rs10840051 chr11 8475180 Intron 7 129413 CEU:1.0;0.955, CHB:1.0;0.816, JPT:0.95;0.903 LEAD_SNP rs4929923 chr11 8639200 Exon,non-coding 6 ASSOCIATION 21102462 Menarche (age at onset) 8.0 TRIM66 FUNCTIONAL_SNP rs11042023 chr11 8662516 Coding 4 23316 CEU:1.0;0.951, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.79;0.519 FUNCTIONAL_SNP rs4256980 chr11 8673939 Intron 2b 34739 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.829;0.551 FUNCTIONAL_SNP rs10769938 chr11 8671547 Intron 5b 32347 CEU:1.0;0.809, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4929927 chr11 8658485 Intron 6 19285 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.829;0.551 FUNCTIONAL_SNP rs6486253 chr11 8668350 Intron 6 29150 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.951, YRI:0.79;0.519 FUNCTIONAL_SNP rs4929948 chr11 8644530 Intron 6 5330 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.87;0.585 FUNCTIONAL_SNP rs10840099 chr11 8667680 Intron 6 28480 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:0.755;0.549 FUNCTIONAL_SNP rs1502317 chr11 8682018 Intron 6 42818 CEU:1.0;0.809, CHB:1.0;1.0, JPT:1.0;0.906, YRI:0.829;0.551 FUNCTIONAL_SNP rs4929928 chr11 8675086 Intron 7 35886 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.852;0.529 FUNCTIONAL_SNP rs10769936 chr11 8654528 Intron 7 15328 CEU:1.0;0.809, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.677 FUNCTIONAL_SNP rs7113874 chr11 8688016 Intron 7 48816 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4929947 chr11 8639994 Intron 7 794 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.577 FUNCTIONAL_SNP rs11042025 chr11 8675475 Intron 7 36275 CEU:1.0;0.809, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.829;0.687 FUNCTIONAL_SNP rs4291677 chr11 8680891 Intron 7 41691 CEU:1.0;0.809, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.789 FUNCTIONAL_SNP rs2316901 chr11 8679016 Intron 7 39816 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:0.829;0.551 FUNCTIONAL_SNP rs12803166 chr11 8646237 Intron 7 7037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:0.823;0.538 FUNCTIONAL_SNP rs12575252 chr11 8694073 Intergenic 7 54873 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs885114 chr11 8678756 Intron 7 39556 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.789 FUNCTIONAL_SNP rs10840100 chr11 8669437 Intron 7 30237 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.79;0.519 LEAD_SNP rs6484218 chr11 10390581 Intergenic 6 ASSOCIATION 20713499 Schizophrenia, bipolar disorder and depression (combined) 7.39794000867 ADM - AMPD3 FUNCTIONAL_SNP rs10770107 chr11 10391880 Intergenic 6 1299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10840396 chr11 10389448 Intergenic 6 1133 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.582 FUNCTIONAL_SNP rs7119983 chr11 10390692 Intergenic 6 111 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7940646 chr11 10669228 Intron 2a ASSOCIATION 20526338 Platelet aggregation 6.0 MRVI1 FUNCTIONAL_SNP rs4909945 chr11 10673739 Coding 3a 4511 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4442541 chr11 10669172 Intron 4 56 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2052692 chr11 10667641 Intron 5b 1587 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6484437 chr11 10667275 Intron 6 1953 CEU:1.0;0.933 FUNCTIONAL_SNP rs10840457 chr11 10675738 Intron 7 6510 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2052690 chr11 10664033 Intron 7 5195 CEU:0.934;0.82, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2052691 chr11 10664421 Intron 7 4807 CEU:0.934;0.82, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4910165 chr11 10674044 Intron 7 4816 CEU:0.941;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11042906 chr11 10665235 Intron 7 3993 CEU:0.937;0.828, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2018368 chr11 10740366 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.0 MRVI1 - CTR9 FUNCTIONAL_SNP rs753002 chr11 10739243 Intergenic 5a 1123 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;0.95 FUNCTIONAL_SNP rs10743148 chr11 10748069 Intergenic 5b 7703 CEU:1.0;0.962, CHB:1.0;0.928, JPT:0.948;0.898 FUNCTIONAL_SNP rs11042933 chr11 10741438 Intergenic 5b 1072 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.95 FUNCTIONAL_SNP rs747041 chr11 10739866 Intergenic 6 500 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs7482037 chr11 10704733 Intron 6 35633 CEU:0.959;0.919, CHB:1.0;0.779, JPT:0.946;0.85 FUNCTIONAL_SNP rs11042937 chr11 10745394 Intergenic 6 5028 CEU:1.0;1.0, CHB:1.0;0.928, JPT:0.948;0.898, YRI:1.0;0.822 LEAD_SNP rs11042937 chr11 10745394 Intergenic 6 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.69897000434 MRVI1 - CTR9 FUNCTIONAL_SNP rs753002 chr11 10739243 Intergenic 5a 6151 CEU:1.0;0.962, CHB:1.0;0.928, JPT:1.0;0.95 FUNCTIONAL_SNP rs10743148 chr11 10748069 Intergenic 5b 2675 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11042933 chr11 10741438 Intergenic 5b 3956 CEU:1.0;0.96, CHB:1.0;0.927, JPT:1.0;0.95 FUNCTIONAL_SNP rs747041 chr11 10739866 Intergenic 6 5528 CEU:1.0;0.96, CHB:1.0;0.927, JPT:1.0;0.949 FUNCTIONAL_SNP rs7482037 chr11 10704733 Intron 6 40661 CEU:0.959;0.919, CHB:1.0;0.723, JPT:0.891;0.754 FUNCTIONAL_SNP rs2018368 chr11 10740366 Intergenic 7 5028 CEU:1.0;1.0, CHB:1.0;0.928, JPT:0.948;0.898, YRI:1.0;0.822 LEAD_SNP rs7120489 chr11 12469397 Intron 7 ASSOCIATION 20400778 Mortality among heart failure patients 5.15490195999 PARVA FUNCTIONAL_SNP rs10741590 chr11 12463318 Intron 2b 6079 CEU:1.0;1.0, YRI:1.0;0.502 FUNCTIONAL_SNP rs2081612 chr11 12453041 Intron 4 16356 CEU:1.0;0.801 FUNCTIONAL_SNP rs11022357 chr11 12462322 Intron 5a 7075 CEU:1.0;1.0 FUNCTIONAL_SNP rs933934 chr11 12455081 Intron 5b 14316 CEU:1.0;1.0 FUNCTIONAL_SNP rs6485742 chr11 12454076 Intron 7 15321 CEU:1.0;0.801 FUNCTIONAL_SNP rs7119987 chr11 12469028 Intron 7 369 CEU:1.0;0.802, YRI:1.0;0.69 FUNCTIONAL_SNP rs3812759 chr11 12443958 Intron 7 25439 CEU:1.0;0.802 FUNCTIONAL_SNP rs7102613 chr11 12428759 Intron 7 40638 CEU:1.0;0.88 LEAD_SNP rs900145 chr11 13293905 Intergenic 7 ASSOCIATION 21102462 Menarche (age at onset) 7.69897000434 RASSF10 - ARNTL FUNCTIONAL_SNP rs1481891 chr11 13310718 Intron 4 16813 CEU:1.0;0.903, CHB:1.0;0.906, JPT:1.0;0.851 FUNCTIONAL_SNP rs1481892 chr11 13301921 Intron 4 8016 CEU:1.0;0.903, CHB:1.0;0.952, JPT:1.0;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs4414197 chr11 13306311 Intron 4 12406 CEU:1.0;0.903, CHB:1.0;0.906, JPT:1.0;0.851 FUNCTIONAL_SNP rs2279284 chr11 13298750 Intergenic 4 4845 CEU:0.948;0.899, CHB:1.0;0.952, JPT:1.0;0.851 FUNCTIONAL_SNP rs2279285 chr11 13298687 Intergenic 4 4782 CEU:1.0;0.903, CHB:1.0;0.952, JPT:1.0;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs2279286 chr11 13298519 Intergenic 4 4614 CEU:1.0;0.903, CHB:1.0;0.952, JPT:1.0;0.847, YRI:1.0;0.963 FUNCTIONAL_SNP rs2279287 chr11 13298485 Intergenic 4 4580 CEU:1.0;0.903, CHB:1.0;0.952, JPT:1.0;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs11022753 chr11 13310854 Intron 4 16949 CEU:0.948;0.899, CHB:1.0;0.906, JPT:1.0;0.851 FUNCTIONAL_SNP rs12290622 chr11 13314307 Intron 5a 20402 CEU:1.0;0.903, CHB:1.0;0.906, JPT:1.0;0.851 FUNCTIONAL_SNP rs4146388 chr11 13306605 Intron 5a 12700 CEU:0.948;0.899, CHB:1.0;0.906, JPT:1.0;0.851 FUNCTIONAL_SNP rs1481880 chr11 13269548 Intergenic 5b 24357 CEU:0.946;0.848, CHB:0.938;0.688, JPT:1.0;0.656 FUNCTIONAL_SNP rs7107287 chr11 13312969 Intron 5b 19064 CEU:0.948;0.899, CHB:1.0;0.906, JPT:1.0;0.851 FUNCTIONAL_SNP rs10766064 chr11 13277932 Intergenic 5b 15973 CEU:0.943;0.8, CHB:0.934;0.674, JPT:1.0;0.656 FUNCTIONAL_SNP rs10766065 chr11 13277961 Intergenic 5b 15944 CEU:0.946;0.848, CHB:0.938;0.688, JPT:1.0;0.656 FUNCTIONAL_SNP rs10766066 chr11 13278027 Intergenic 5b 15878 CEU:0.946;0.848, CHB:0.932;0.637, JPT:1.0;0.623 FUNCTIONAL_SNP rs11605518 chr11 13270214 Intergenic 6 23691 CEU:0.946;0.848, CHB:0.936;0.681, JPT:1.0;0.656 FUNCTIONAL_SNP rs986721 chr11 13270717 Intergenic 6 23188 CEU:0.946;0.848, CHB:0.938;0.688, JPT:1.0;0.656 FUNCTIONAL_SNP rs4757141 chr11 13307095 Intron 6 13190 CEU:0.948;0.899, CHB:1.0;0.906, JPT:1.0;0.851 FUNCTIONAL_SNP rs11022733 chr11 13281557 Intergenic 6 12348 CEU:0.946;0.848, CHB:0.938;0.688, JPT:1.0;0.656 FUNCTIONAL_SNP rs11022742 chr11 13296561 Intergenic 6 2656 CEU:0.948;0.899, CHB:1.0;0.952, JPT:1.0;0.851 FUNCTIONAL_SNP rs7109016 chr11 13293979 Intergenic 6 74 CEU:1.0;0.95, CHB:1.0;0.952, JPT:1.0;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs11022750 chr11 13307594 Intron 6 13689 CEU:0.948;0.899, CHB:1.0;0.906, JPT:1.0;0.851 FUNCTIONAL_SNP rs11022755 chr11 13315049 Intron 6 21144 CEU:1.0;0.948, CHB:1.0;0.906, JPT:1.0;0.851 FUNCTIONAL_SNP rs900147 chr11 13293840 Intergenic 7 65 CEU:1.0;0.942, CHB:1.0;0.941, JPT:1.0;0.881 FUNCTIONAL_SNP rs747601 chr11 13274553 Intergenic 7 19352 CEU:0.946;0.848, CHB:0.938;0.688, JPT:1.0;0.656 FUNCTIONAL_SNP rs986720 chr11 13271138 Intergenic 7 22767 CEU:0.946;0.848, CHB:0.938;0.688, JPT:1.0;0.656 FUNCTIONAL_SNP rs10832007 chr11 13270052 Intergenic 7 23853 CEU:0.946;0.848, CHB:0.938;0.688, JPT:1.0;0.656 FUNCTIONAL_SNP rs10832012 chr11 13293248 Intergenic 7 657 CEU:0.946;0.849, CHB:1.0;0.952, JPT:1.0;0.851 FUNCTIONAL_SNP rs4757138 chr11 13297925 Intergenic 7 4020 CEU:1.0;0.903, CHB:1.0;0.952, JPT:1.0;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs998089 chr11 13284111 Intergenic 7 9794 CEU:0.946;0.849, CHB:1.0;0.952, JPT:1.0;0.851 FUNCTIONAL_SNP rs2403662 chr11 13302822 Intron 7 8917 CEU:1.0;0.903, CHB:1.0;0.95, JPT:1.0;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs11022738 chr11 13293182 Intergenic 7 723 CEU:0.946;0.849, CHB:1.0;0.952, JPT:1.0;0.851 FUNCTIONAL_SNP rs11022754 chr11 13313243 Intron 7 19338 CEU:0.948;0.899, CHB:1.0;0.906, JPT:1.0;0.851 FUNCTIONAL_SNP rs11022756 chr11 13315439 Intron 7 21534 CEU:1.0;0.903, CHB:1.0;0.906, JPT:1.0;0.851 FUNCTIONAL_SNP rs2403661 chr11 13285281 Intergenic 7 8624 CEU:1.0;0.95, CHB:1.0;0.952, JPT:1.0;0.851 LEAD_SNP rs9630182 chr11 13620172 Intergenic 6 ASSOCIATION 19874204 Bone mineral density 6.39794000867 PTH - FAR1 FUNCTIONAL_SNP rs11603943 chr11 13547114 Intergenic 5a 73058 CEU:1.0;0.82, JPT:1.0;0.505 FUNCTIONAL_SNP rs10766083 chr11 13496731 Intergenic 6 123441 CEU:1.0;0.814, JPT:1.0;0.505 FUNCTIONAL_SNP rs11022858 chr11 13526633 Intergenic 6 93539 CEU:1.0;0.814, JPT:1.0;0.505, YRI:0.854;0.534 FUNCTIONAL_SNP rs1459011 chr11 13573554 Intergenic 6 46618 CEU:1.0;0.82, JPT:1.0;0.505 FUNCTIONAL_SNP rs10832077 chr11 13611963 Intergenic 6 8209 CEU:1.0;0.82, JPT:1.0;0.505 FUNCTIONAL_SNP rs11022888 chr11 13586380 Intergenic 7 33792 CEU:1.0;0.82, JPT:1.0;0.505 FUNCTIONAL_SNP rs7125774 chr11 13618804 Intergenic 7 1368 CEU:1.0;0.888, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10766086 chr11 13523451 Intergenic 7 96721 CEU:1.0;0.82, JPT:1.0;0.505 FUNCTIONAL_SNP rs12365099 chr11 13548100 Intergenic 7 72072 CEU:1.0;0.82, JPT:1.0;0.505 FUNCTIONAL_SNP rs694 chr11 13514417 Intron 7 105755 CEU:1.0;0.82, JPT:1.0;0.505 FUNCTIONAL_SNP rs2036417 chr11 13617608 Intergenic 7 2564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.96 FUNCTIONAL_SNP rs12418886 chr11 13500778 Intergenic 7 119394 CEU:1.0;0.82, JPT:1.0;0.505 FUNCTIONAL_SNP rs10832076 chr11 13611137 Intergenic 7 9035 CEU:1.0;0.82 FUNCTIONAL_SNP rs11022868 chr11 13548662 Intergenic 7 71510 CEU:1.0;0.82, JPT:1.0;0.505 LEAD_SNP rs10741657 chr11 14914878 Intergenic 7 ASSOCIATION 20541252 Vitamin D insufficiency 19.5228787453 CYP2R1 FUNCTIONAL_SNP rs2060793 chr11 14915310 Intergenic 5b 432 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.814 FUNCTIONAL_SNP rs6486205 chr11 14881256 Intron 6 33622 CEU:0.953;0.868, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.806 FUNCTIONAL_SNP rs1037379 chr11 14852784 Intron 6 62094 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.854 FUNCTIONAL_SNP rs1993116 chr11 14910234 Intron 7 4644 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7116978 chr11 14881771 Intron 7 33107 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.814 FUNCTIONAL_SNP rs1868997 chr11 14894220 Intergenic 7 20658 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.814 LEAD_SNP rs7117858 chr11 15694462 Intron 7 ASSOCIATION 19801982 Bone mineral density (hip) 9.22184874962 INSC - SOX6 FUNCTIONAL_SNP rs4757353 chr11 15714623 Intron 4 20161 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.851 FUNCTIONAL_SNP rs900866 chr11 15730012 Intron 5b 35550 CEU:1.0;0.95, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.643 FUNCTIONAL_SNP rs7926837 chr11 15708792 Intron 5b 14330 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7128738 chr11 15692228 Intron 5b 2234 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.881 FUNCTIONAL_SNP rs9787942 chr11 15695331 Intron 6 869 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1385162 chr11 15689391 Intron 6 5071 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.927, YRI:1.0;0.879 FUNCTIONAL_SNP rs16931857 chr11 15736739 Intron 6 42277 CEU:1.0;0.949, CHB:1.0;0.809, JPT:1.0;1.0, YRI:1.0;0.782 FUNCTIONAL_SNP rs4757354 chr11 15723082 Intron 6 28620 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0 FUNCTIONAL_SNP rs10766280 chr11 15724888 Intron 7 30426 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.758 FUNCTIONAL_SNP rs7933516 chr11 15729065 Intron 7 34603 CEU:1.0;0.951, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.556 FUNCTIONAL_SNP rs10741684 chr11 15727033 Intron 7 32571 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.725 FUNCTIONAL_SNP rs4556501 chr11 15730816 Intron 7 36354 CEU:1.0;0.949, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.652 FUNCTIONAL_SNP rs11827785 chr11 15730511 Intron 7 36049 CEU:1.0;0.95, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.652 LEAD_SNP rs11023787 chr11 15952294 Intergenic 7 ASSOCIATION 21104366 Wrist bone mass 15.3010299957 INSC - SOX6 FUNCTIONAL_SNP rs878625 chr11 15939695 Intron 5a 12599 CEU:1.0;0.89, CHB:1.0;0.594, JPT:0.941;0.665 FUNCTIONAL_SNP rs10832529 chr11 15930472 Intergenic 5b 21822 CEU:1.0;0.89, CHB:0.928;0.537, JPT:0.941;0.665 FUNCTIONAL_SNP rs10832532 chr11 15958717 Intergenic 5b 6423 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7111730 chr11 15966352 Intergenic 5b 14058 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.953 FUNCTIONAL_SNP rs7118552 chr11 15965767 Intergenic 5b 13473 CEU:1.0;0.89 FUNCTIONAL_SNP rs11023773 chr11 15930944 Intergenic 6 21350 CEU:1.0;0.879, CHB:0.928;0.537, JPT:0.941;0.665 FUNCTIONAL_SNP rs10500819 chr11 15936479 Intron 6 15815 CEU:1.0;0.89, CHB:1.0;0.594, JPT:0.941;0.665 FUNCTIONAL_SNP rs10458876 chr11 15939080 Intron 6 13214 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs11023779 chr11 15937067 Intron 7 15227 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs11023789 chr11 15956612 Intergenic 7 4318 CEU:1.0;1.0 FUNCTIONAL_SNP rs2099776 chr11 15937823 Intron 7 14471 CEU:1.0;0.89, CHB:1.0;0.594, JPT:0.941;0.665 FUNCTIONAL_SNP rs16932318 chr11 15942032 Intergenic 7 10262 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10458877 chr11 15941099 Intergenic 7 11195 CEU:1.0;0.89, CHB:1.0;0.594, JPT:0.941;0.665 LEAD_SNP rs297325 chr11 16389594 Intron 7 ASSOCIATION 19714249 Obesity and osteoporosis 6.39794000867 SOX6 FUNCTIONAL_SNP rs4491181 chr11 16532857 Intron 4 143263 CEU:1.0;0.838, CHB:0.926;0.671, JPT:1.0;1.0, YRI:1.0;0.647 FUNCTIONAL_SNP rs2174164 chr11 16443567 Intron 4 53973 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10832619 chr11 16509451 Intron 4 119857 CEU:1.0;0.838, CHB:0.926;0.671, JPT:1.0;1.0, YRI:1.0;0.647 FUNCTIONAL_SNP rs297335 chr11 16397060 Intron 5b 7466 CEU:1.0;0.944, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs1948824 chr11 16477723 Intron 6 88129 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs4757403 chr11 16476452 Intron 6 86858 CEU:1.0;0.945, CHB:1.0;0.881, JPT:1.0;1.0 FUNCTIONAL_SNP rs4757410 chr11 16573703 Intron 6 184109 CEU:1.0;0.838, CHB:0.919;0.648, JPT:1.0;0.927, YRI:1.0;0.607 FUNCTIONAL_SNP rs11023934 chr11 16425958 Intron 6 36364 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs10766327 chr11 16515434 Intron 6 125840 CEU:1.0;0.838, CHB:0.926;0.671, JPT:1.0;1.0 FUNCTIONAL_SNP rs11023965 chr11 16516697 Intron 6 127103 CEU:1.0;0.838, CHB:0.926;0.671, JPT:1.0;1.0, YRI:1.0;0.647 FUNCTIONAL_SNP rs1393924 chr11 16405894 Intron 7 16300 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs10832645 chr11 16576634 Intron 7 187040 CEU:1.0;0.838, JPT:1.0;0.663 FUNCTIONAL_SNP rs7951243 chr11 16470773 Intron 7 81179 CEU:1.0;0.937, CHB:1.0;0.941, JPT:1.0;1.0 FUNCTIONAL_SNP rs7951760 chr11 16471359 Intron 7 81765 CEU:1.0;0.945, CHB:1.0;0.941, JPT:1.0;1.0 FUNCTIONAL_SNP rs4757397 chr11 16441622 Intron 7 52028 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4757398 chr11 16442815 Intron 7 53221 CEU:1.0;0.944, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10832644 chr11 16575549 Intron 7 185955 CEU:1.0;0.837, CHB:0.926;0.671, JPT:1.0;0.86, YRI:1.0;0.647 FUNCTIONAL_SNP rs4757402 chr11 16476398 Intron 7 86804 CEU:1.0;0.94, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs12221729 chr11 16432464 Intron 7 42870 CEU:1.0;0.945, CHB:1.0;0.939, JPT:1.0;1.0 FUNCTIONAL_SNP rs10741698 chr11 16462033 Intron 7 72439 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11023947 chr11 16473184 Intron 7 83590 CEU:1.0;0.945, CHB:1.0;0.937, JPT:1.0;1.0 FUNCTIONAL_SNP rs11023942 chr11 16451351 Intron 7 61757 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs1503440 chr11 16422564 Intron 7 32970 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10832604 chr11 16445346 Intron 7 55752 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs10500830 chr11 16485251 Intron 7 95657 CEU:1.0;0.89, CHB:1.0;0.733, JPT:1.0;0.924, YRI:1.0;0.647 FUNCTIONAL_SNP rs10832607 chr11 16462767 Intron 7 73173 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10832609 chr11 16480439 Intron 7 90845 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs10832610 chr11 16480518 Intron 7 90924 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs4307685 chr11 16549236 Intron 7 159642 CEU:1.0;0.838, CHB:0.923;0.66, JPT:1.0;0.927, YRI:1.0;0.647 FUNCTIONAL_SNP rs10832616 chr11 16506090 Intron 7 116496 CEU:1.0;0.886, CHB:1.0;0.733, JPT:1.0;0.924, YRI:1.0;0.647 FUNCTIONAL_SNP rs10832620 chr11 16511909 Intron 7 122315 CEU:1.0;0.838, CHB:0.926;0.671, JPT:1.0;1.0 FUNCTIONAL_SNP rs16933105 chr11 16464678 Intron 7 75084 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs4756850 chr11 16435849 Intron 7 46255 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs10766324 chr11 16469951 Intron 7 80357 CEU:1.0;0.945, CHB:1.0;0.939, JPT:1.0;1.0 FUNCTIONAL_SNP rs297337 chr11 16401393 Intron 7 11799 CEU:1.0;0.932, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs297338 chr11 16401935 Intron 7 12341 CEU:1.0;0.945, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16933117 chr11 16468395 Intron 7 78801 CEU:1.0;0.944, CHB:1.0;0.941, JPT:1.0;0.927 FUNCTIONAL_SNP rs4132991 chr11 16568206 Intron 7 178612 CEU:1.0;0.838, CHB:0.926;0.671, JPT:1.0;0.927, YRI:1.0;0.647 LEAD_SNP rs4756846 chr11 16403511 Intron 7 ASSOCIATION 19714249 Obesity and osteoporosis 6.30102999566 SOX6 FUNCTIONAL_SNP rs16933090 chr11 16455794 Intron 4 52283 CEU:1.0;1.0 FUNCTIONAL_SNP rs4256940 chr11 16534636 Intron 5b 131125 CEU:1.0;0.811 FUNCTIONAL_SNP rs17470624 chr11 16445649 Intron 6 42138 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1393928 chr11 16484638 Intron 6 81127 CEU:1.0;0.813 FUNCTIONAL_SNP rs4757400 chr11 16469929 Intron 7 66418 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4365016 chr11 16539117 Intron 7 135606 CEU:1.0;0.813 FUNCTIONAL_SNP rs17554301 chr11 16402082 Intron 7 1429 CEU:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs17554911 chr11 16432694 Intron 7 29183 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs381815 chr11 16902268 Intron 7 ASSOCIATION 19430479 Systolic blood pressure 8.69897000434 PLEKHA7 FUNCTIONAL_SNP rs448671 chr11 16900103 Intron 7 2165 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11024074 chr11 16917219 Intron 5b ASSOCIATION 19430479 Diastolic blood pressure 6.0 PLEKHA7 FUNCTIONAL_SNP rs416258 chr11 16911636 Intron 3a 5583 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs5215 chr11 17408630 Coding 4 ASSOCIATION 18372903 Type 2 diabetes 6.39794000867 KCNJ11 ASSOCIATION 17463249 Type 2 diabetes 10.3010299957 KCNJ11 LEAD_SNP rs5219 chr11 17409572 Coding 5b ASSOCIATION 19056611 Type 2 diabetes 9.0 KCNJ11 ASSOCIATION 19056611 Type 2 diabetes 6.30102999566 KCNJ11 ASSOCIATION 17463246 Type 2 diabetes 7.0 KCNJ11 ASSOCIATION 17463248 Type 2 diabetes 10.15490196 KCNJ11 LEAD_SNP rs12282742 chr11 18265799 Intron 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.0 SAA2 FUNCTIONAL_SNP rs3758946 chr11 18270898 Intergenic 6 5099 CEU:1.0;0.825, JPT:0.898;0.735 LEAD_SNP rs4638289 chr11 18285774 Intergenic 4 ASSOCIATION 21124955 Amyloid A Levels 52.5228787453 SAA1 FUNCTIONAL_SNP rs1993373 chr11 18280635 Intergenic 6 5139 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.891 FUNCTIONAL_SNP rs7950019 chr11 18278912 Intergenic 7 6862 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.806 FUNCTIONAL_SNP rs7112278 chr11 18281916 Intergenic 7 3858 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.846 LEAD_SNP rs4353250 chr11 18323517 Intron 5b ASSOCIATION 21124955 Amyloid A Levels 50.6989700043 HPS5 FUNCTIONAL_SNP rs9988866 chr11 18392983 Intergenic 2b 69466 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4150650 chr11 18374279 Intron 2b 50762 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3825025 chr11 18343822 Intergenic 4 20305 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs4150550 chr11 18350898 Intron 4 27381 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4150651 chr11 18374425 Intron 4 50908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4150579 chr11 18357180 Intron 5a 33663 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4150673 chr11 18383449 Intron 5b 59932 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4150562 chr11 18354995 Intron 5b 31478 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4150564 chr11 18355308 Intron 5b 31791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4150615 chr11 18365028 Intron 6 41511 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4150575 chr11 18356466 Intron 6 32949 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4150622 chr11 18365710 Intron 6 42193 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs10741741 chr11 18342081 Intron 6 18564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1520884 chr11 18309700 Intron 6 13817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4150661 chr11 18379629 Intron 7 56112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4757645 chr11 18393845 Intergenic 7 70328 CEU:1.0;0.861 FUNCTIONAL_SNP rs4150561 chr11 18354877 Intron 7 31360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3740711 chr11 18379839 Intron 7 56322 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9783347 chr11 18384938 Intron 7 61421 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4150610 chr11 18364140 Intron 7 40623 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4150612 chr11 18364358 Intron 7 40841 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4150616 chr11 18365114 Intron 7 41597 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2061164 chr11 18329006 Intron 7 5489 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs4150641 chr11 18370739 Intron 7 47222 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4150655 chr11 18375164 Intron 7 51647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2896526 chr11 18419806 Intron 6 ASSOCIATION 21124955 Amyloid A Levels 21.3979400087 LDHA LEAD_SNP rs874426 chr11 19569563 Intron 7 ASSOCIATION 18937294 Attention deficit hyperactivity disorder (time to onset) 5.39794000867 NAV2 LEAD_SNP rs7128311 chr11 20562519 Intergenic 7 ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 5.30102999566 LOC645490 LEAD_SNP rs1793004 chr11 20698929 Intron 7 ASSOCIATION 17684544 Crohn's disease 5.52287874528 NELL1 LEAD_SNP rs7111546 chr11 22829757 Intron 4 ASSOCIATION 21546767 Dialysis-related mortality 5.69897000434 GAS2 LEAD_SNP rs712022 chr11 22843155 Exon,non-coding 6 ASSOCIATION 21546767 Dialysis-related mortality 5.22184874962 SVIP LEAD_SNP rs10833905 chr11 23044592 Intergenic 5a ASSOCIATION 21658281 Sudden cardiac arrest 6.15490195999 SVIP - RPS2P38 FUNCTIONAL_SNP rs5005787 chr11 23044486 Intergenic 5a 106 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10833902 chr11 23035193 Intergenic 5a 9399 CEU:1.0;0.93, CHB:0.928;0.571, JPT:1.0;0.853 FUNCTIONAL_SNP rs11026965 chr11 23099280 Intergenic 6 54688 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10766999 chr11 23078303 Intergenic 6 33711 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12286745 chr11 23002119 Intergenic 6 42473 CEU:0.917;0.84, JPT:0.87;0.586 FUNCTIONAL_SNP rs10767006 chr11 23110632 Intergenic 6 66040 CEU:0.916;0.839, CHB:1.0;0.929, JPT:1.0;0.935 FUNCTIONAL_SNP rs2114466 chr11 23036387 Intergenic 6 8205 CEU:1.0;0.93, CHB:0.927;0.566, JPT:1.0;0.857 FUNCTIONAL_SNP rs11026884 chr11 23019376 Intergenic 6 25216 CEU:1.0;0.93, JPT:0.931;0.61 FUNCTIONAL_SNP rs11026889 chr11 23021443 Intergenic 6 23149 CEU:1.0;0.93, JPT:0.931;0.61 FUNCTIONAL_SNP rs10833877 chr11 23009815 Intergenic 6 34777 CEU:1.0;0.912, JPT:0.931;0.61 FUNCTIONAL_SNP rs10833895 chr11 23028497 Intergenic 6 16095 CEU:1.0;0.922, JPT:1.0;0.726 FUNCTIONAL_SNP rs11026927 chr11 23056649 Intergenic 6 12057 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.515 FUNCTIONAL_SNP rs10833906 chr11 23045374 Intergenic 6 782 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0 FUNCTIONAL_SNP rs3909702 chr11 23044153 Intergenic 6 439 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12279454 chr11 23042315 Intergenic 6 2277 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10833918 chr11 23061948 Intergenic 6 17356 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.518 FUNCTIONAL_SNP rs16910406 chr11 23005746 Intergenic 7 38846 CEU:0.926;0.857, JPT:0.938;0.717 FUNCTIONAL_SNP rs10766983 chr11 22946149 Intron 7 98443 CEU:0.926;0.857, JPT:0.92;0.515 FUNCTIONAL_SNP rs10833931 chr11 23097253 Intergenic 7 52661 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;0.901 FUNCTIONAL_SNP rs10766991 chr11 23008871 Intergenic 7 35721 CEU:1.0;0.912, JPT:0.928;0.621 FUNCTIONAL_SNP rs2303514 chr11 23005534 Intergenic 7 39058 CEU:0.926;0.857, JPT:0.936;0.71 FUNCTIONAL_SNP rs12291247 chr11 23001363 Intergenic 7 43229 CEU:0.926;0.857, JPT:0.87;0.586 FUNCTIONAL_SNP rs1426849 chr11 23047939 Intergenic 7 3347 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs3909703 chr11 23020640 Intergenic 7 23952 CEU:1.0;0.93, JPT:0.931;0.61 FUNCTIONAL_SNP rs3866928 chr11 23002640 Intergenic 7 41952 CEU:0.926;0.857, JPT:0.877;0.657 FUNCTIONAL_SNP rs1465521 chr11 23032426 Intergenic 7 12166 CEU:1.0;0.93, JPT:1.0;0.703 FUNCTIONAL_SNP rs11026869 chr11 22994907 Intergenic 7 49685 CEU:0.926;0.857, JPT:0.938;0.717 FUNCTIONAL_SNP rs876092 chr11 23042621 Intergenic 7 1971 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10430910 chr11 23036819 Intergenic 7 7773 CEU:1.0;0.93, CHB:0.928;0.571, JPT:1.0;0.857 FUNCTIONAL_SNP rs11026880 chr11 23015819 Intergenic 7 28773 CEU:1.0;0.93, JPT:0.931;0.61 FUNCTIONAL_SNP rs12417226 chr11 23038835 Intergenic 7 5757 CEU:1.0;1.0, CHB:0.926;0.588, JPT:1.0;0.853 FUNCTIONAL_SNP rs11026893 chr11 23024236 Intergenic 7 20356 CEU:1.0;0.93, JPT:0.931;0.61 FUNCTIONAL_SNP rs10833870 chr11 22989424 Intergenic 7 55168 CEU:0.926;0.857, JPT:0.933;0.643 FUNCTIONAL_SNP rs2468560 chr11 23088629 Intergenic 7 44037 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10833876 chr11 23006622 Intergenic 7 37970 CEU:0.926;0.857, JPT:0.938;0.717 FUNCTIONAL_SNP rs2195030 chr11 23095871 Intergenic 7 51279 CEU:1.0;0.929, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11026959 chr11 23088775 Intergenic 7 44183 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10833896 chr11 23029146 Intergenic 7 15446 CEU:1.0;0.93, JPT:1.0;0.703 FUNCTIONAL_SNP rs10833916 chr11 23058325 Intergenic 7 13733 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10833904 chr11 23040011 Intergenic 7 4581 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12421624 chr11 23016428 Intergenic 7 28164 CEU:1.0;0.93, JPT:0.931;0.61 LEAD_SNP rs4561213 chr11 24678819 Intron 6 ASSOCIATION 20700443 Serum magnesium levels 6.52287874528 LUZP2 FUNCTIONAL_SNP rs4465366 chr11 24683117 Intron 7 4298 CEU:0.957;0.878, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.826 LEAD_SNP rs10500991 chr11 24849566 Intron 7 ASSOCIATION 19084217 Serum markers of iron status 5.69897000434 LUZP2 LEAD_SNP rs12794435 chr11 25207704 Intergenic 7 ASSOCIATION 20852632 Ovarian cancer 5.30102999566 LUZP2 - RPL36AP40 FUNCTIONAL_SNP rs6484118 chr11 25198836 Intergenic 6 8868 CEU:1.0;0.825, CHB:1.0;1.0 FUNCTIONAL_SNP rs12283038 chr11 25197219 Intergenic 6 10485 CEU:1.0;1.0 FUNCTIONAL_SNP rs7121964 chr11 25187405 Intergenic 6 20299 CEU:1.0;0.824 FUNCTIONAL_SNP rs767026 chr11 25200253 Intergenic 6 7451 CEU:1.0;0.825, CHB:1.0;1.0 FUNCTIONAL_SNP rs4572086 chr11 25187865 Intergenic 6 19839 CEU:1.0;0.824 FUNCTIONAL_SNP rs1838775 chr11 25179676 Intergenic 6 28028 CEU:1.0;0.824, CHB:1.0;1.0 FUNCTIONAL_SNP rs12791486 chr11 25175198 Intergenic 6 32506 CEU:1.0;0.824, CHB:1.0;1.0 FUNCTIONAL_SNP rs7115328 chr11 25197999 Intergenic 6 9705 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs7107300 chr11 25187376 Intergenic 6 20328 CEU:1.0;0.824, CHB:1.0;1.0 FUNCTIONAL_SNP rs12787700 chr11 25197704 Intergenic 6 10000 CEU:1.0;0.825, CHB:1.0;1.0 FUNCTIONAL_SNP rs12800405 chr11 25200033 Intergenic 7 7671 CEU:1.0;0.825, CHB:1.0;1.0 FUNCTIONAL_SNP rs2194905 chr11 25212045 Intergenic 7 4341 CEU:1.0;0.825, CHB:1.0;1.0 FUNCTIONAL_SNP rs7106456 chr11 25199419 Intergenic 7 8285 CEU:1.0;0.825 FUNCTIONAL_SNP rs1584184 chr11 25181297 Intergenic 7 26407 CEU:1.0;0.824 FUNCTIONAL_SNP rs1365073 chr11 25200122 Intergenic 7 7582 CEU:1.0;0.825 FUNCTIONAL_SNP rs12793062 chr11 25207228 Intergenic 7 476 CEU:1.0;1.0 FUNCTIONAL_SNP rs12785644 chr11 25197556 Intergenic 7 10148 CEU:1.0;1.0 LEAD_SNP rs12295638 chr11 26605331 Intron 2b ASSOCIATION 19553259 Obesity (extreme) 5.39794000867 ANO3 LEAD_SNP rs988712 chr11 27563382 Intron 7 ASSOCIATION 21708048 Obesity 16.3010299957 BDNFOS FUNCTIONAL_SNP rs10767649 chr11 27613818 Intron 4 50436 CEU:1.0;1.0, CHB:1.0;0.535 FUNCTIONAL_SNP rs10742178 chr11 27613718 Intron 4 50336 CEU:1.0;1.0, CHB:1.0;0.535 FUNCTIONAL_SNP rs4074134 chr11 27647285 Intron 5a 83903 CEU:1.0;0.843 FUNCTIONAL_SNP rs1304100 chr11 27571603 Intron 5a 8221 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1488830 chr11 27636885 Intron 5a 73503 CEU:1.0;0.843 FUNCTIONAL_SNP rs4923457 chr11 27648580 Intron 5a 85198 CEU:1.0;0.843 FUNCTIONAL_SNP rs6484313 chr11 27541800 Intron 5b 21582 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1013442 chr11 27578946 Intron 5b 15564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4923456 chr11 27609127 Intron 6 45745 CEU:1.0;0.948, CHB:1.0;0.535 FUNCTIONAL_SNP rs879048 chr11 27638934 Intron 6 75552 CEU:1.0;0.843 FUNCTIONAL_SNP rs2101467 chr11 27544359 Intron 6 19023 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12419948 chr11 27666984 Intron 6 103602 CEU:1.0;0.843 FUNCTIONAL_SNP rs11030104 chr11 27684517 Intron 7 121135 CEU:1.0;0.843 FUNCTIONAL_SNP rs901925 chr11 27542469 Intron 7 20913 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1114029 chr11 27595981 Intron 7 32599 CEU:1.0;1.0, CHB:1.0;0.535 FUNCTIONAL_SNP rs10734394 chr11 27628412 Intron 7 65030 CEU:1.0;1.0, CHB:1.0;0.535 FUNCTIONAL_SNP rs1488829 chr11 27551979 Intron 7 11403 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4923455 chr11 27594146 Intron 7 30764 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4923460 chr11 27656789 Intron 7 93407 CEU:1.0;0.843 FUNCTIONAL_SNP rs4923461 chr11 27656910 Intron 7 93528 CEU:1.0;0.843 FUNCTIONAL_SNP rs6484312 chr11 27541623 Intron 7 21759 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4922788 chr11 27611029 Intron 7 47647 CEU:1.0;1.0, CHB:1.0;0.535 FUNCTIONAL_SNP rs1906654 chr11 27574408 Intron 7 11026 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10501087 chr11 27670108 Intron 7 106726 CEU:1.0;0.843 FUNCTIONAL_SNP rs10835195 chr11 27577231 Intron 7 13849 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7124596 chr11 27594558 Intron 7 31176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16917237 chr11 27702383 Intron 7 139001 CEU:1.0;0.837 FUNCTIONAL_SNP rs925947 chr11 27667367 Intron 7 103985 CEU:1.0;0.941 LEAD_SNP rs7481311 chr11 27583129 Intron 7 ASSOCIATION 19079260 Body mass index 5.09691001301 BDNFOS ASSOCIATION 19079260 Weight 5.52287874528 BDNFOS FUNCTIONAL_SNP rs11030067 chr11 27620932 Intron 4 37803 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.918 FUNCTIONAL_SNP rs10767647 chr11 27567392 Intron 5b 15737 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs12361806 chr11 27619569 Intron 6 36440 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs10835197 chr11 27607543 Intron 6 24414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 LEAD_SNP rs925946 chr11 27667202 Intron 5b ASSOCIATION 19079260 Body mass index 9.04575749056 BDNFOS ASSOCIATION 19079260 Weight 8.39794000867 BDNFOS FUNCTIONAL_SNP rs10767658 chr11 27672252 Intron 7 5050 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6265 chr11 27679916 Coding 6 ASSOCIATION 20418890 Smoking behavior 7.69897000434 BDNF ASSOCIATION 19079260 Body mass index 9.30102999566 BDNF ASSOCIATION 19079260 Weight 6.69897000434 BDNF FUNCTIONAL_SNP rs4074134 chr11 27647285 Intron 5a 32631 CEU:1.0;0.941, CHB:0.942;0.699, JPT:0.945;0.848 FUNCTIONAL_SNP rs11030084 chr11 27643725 Intron 5a 36191 CEU:1.0;1.0, CHB:0.937;0.709, JPT:0.942;0.839 FUNCTIONAL_SNP rs1304100 chr11 27571603 Intron 5a 108313 CEU:1.0;0.817 FUNCTIONAL_SNP rs1488830 chr11 27636885 Intron 5a 43031 CEU:1.0;0.941, CHB:0.834;0.602, JPT:0.869;0.534 FUNCTIONAL_SNP rs4923457 chr11 27648580 Intron 5a 31336 CEU:1.0;0.941, CHB:0.943;0.731, JPT:0.945;0.848 FUNCTIONAL_SNP rs988748 chr11 27724745 Intron 5a 44829 CEU:1.0;0.836, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2049045 chr11 27694241 Intron 5b 14325 CEU:1.0;1.0 FUNCTIONAL_SNP rs7103411 chr11 27700125 Intron 5b 20209 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6484320 chr11 27703188 Intron 5b 23272 CEU:1.0;0.837, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10767664 chr11 27725986 Intron 6 46070 CEU:1.0;0.818, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs879048 chr11 27638934 Intron 6 40982 CEU:1.0;0.941, CHB:0.834;0.602, JPT:0.869;0.534 FUNCTIONAL_SNP rs12419948 chr11 27666984 Intron 6 12932 CEU:1.0;0.941, CHB:1.0;0.865, JPT:1.0;0.95 FUNCTIONAL_SNP rs11030104 chr11 27684517 Intron 7 4601 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4923460 chr11 27656789 Intron 7 23127 CEU:1.0;0.941, CHB:0.942;0.699, JPT:0.945;0.848 FUNCTIONAL_SNP rs4923461 chr11 27656910 Intron 7 23006 CEU:1.0;0.941, CHB:0.942;0.699, JPT:0.945;0.848 FUNCTIONAL_SNP rs6484312 chr11 27541623 Intron 7 138293 CEU:1.0;0.835 FUNCTIONAL_SNP rs10501087 chr11 27670108 Intron 7 9808 CEU:1.0;0.941, CHB:1.0;0.865, JPT:1.0;0.95 FUNCTIONAL_SNP rs2030323 chr11 27728539 Intron 7 48623 CEU:1.0;0.838, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs16917237 chr11 27702383 Intron 7 22467 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs925947 chr11 27667367 Intron 7 12549 CEU:1.0;0.94, CHB:1.0;0.95, JPT:1.0;0.949 LEAD_SNP rs10767664 chr11 27725986 Intron 6 ASSOCIATION 20935630 Body mass index 25.3010299957 BDNF FUNCTIONAL_SNP rs6265 chr11 27679916 Coding 6 46070 CEU:1.0;0.818, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs4074134 chr11 27647285 Intron 5a 78701 CEU:1.0;0.877, CHB:0.885;0.674, JPT:0.945;0.846 FUNCTIONAL_SNP rs11030084 chr11 27643725 Intron 5a 82261 CEU:1.0;0.86, CHB:0.88;0.695, JPT:0.943;0.841 FUNCTIONAL_SNP rs6416056 chr11 27646745 Intron 5a 79241 CEU:1.0;0.832, CHB:0.771;0.564, JPT:0.926;0.582 FUNCTIONAL_SNP rs1488830 chr11 27636885 Intron 5a 89101 CEU:1.0;0.877, CHB:0.78;0.578, JPT:0.871;0.559 FUNCTIONAL_SNP rs4923457 chr11 27648580 Intron 5a 77406 CEU:1.0;0.879, CHB:0.891;0.718, JPT:0.946;0.85 FUNCTIONAL_SNP rs988748 chr11 27724745 Intron 5a 1241 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2049045 chr11 27694241 Intron 5b 31745 CEU:1.0;0.82 FUNCTIONAL_SNP rs7103411 chr11 27700125 Intron 5b 25861 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6484320 chr11 27703188 Intron 5b 22798 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.826 FUNCTIONAL_SNP rs879048 chr11 27638934 Intron 6 87052 CEU:1.0;0.877, CHB:0.78;0.578, JPT:0.871;0.559 FUNCTIONAL_SNP rs12419948 chr11 27666984 Intron 6 59002 CEU:1.0;0.879, CHB:0.947;0.812, JPT:1.0;0.95 FUNCTIONAL_SNP rs11030104 chr11 27684517 Intron 7 41469 CEU:1.0;0.877, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs4923460 chr11 27656789 Intron 7 69197 CEU:1.0;0.877, CHB:0.89;0.683, JPT:0.945;0.846 FUNCTIONAL_SNP rs4923461 chr11 27656910 Intron 7 69076 CEU:1.0;0.877, CHB:0.885;0.674, JPT:0.945;0.846 FUNCTIONAL_SNP rs10501087 chr11 27670108 Intron 7 55878 CEU:1.0;0.877, CHB:0.945;0.807, JPT:1.0;0.949 FUNCTIONAL_SNP rs2030323 chr11 27728539 Intron 7 2553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16917237 chr11 27702383 Intron 7 23603 CEU:1.0;0.871, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs925947 chr11 27667367 Intron 7 58619 CEU:1.0;0.876, CHB:0.947;0.898, JPT:1.0;0.95 LEAD_SNP rs1602565 chr11 29162136 Intergenic 7 ASSOCIATION 18677311 Schizophrenia 5.52287874528 OR2BH1P - RPL7AP58 FUNCTIONAL_SNP rs12366025 chr11 29148890 Intergenic 6 13246 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11030597 chr11 29190528 Intron 7 28392 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3925584 chr11 30760335 Intergenic 7 ASSOCIATION 20700443 Serum magnesium levels 15.3010299957 MPPED2 - DCDC5 FUNCTIONAL_SNP rs963837 chr11 30749090 Intergenic 6 11245 CEU:1.0;0.961, CHB:0.889;0.749, JPT:1.0;0.741, YRI:1.0;0.589 FUNCTIONAL_SNP rs10767873 chr11 30768678 Intergenic 7 8343 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs16921914 chr11 31210771 Intron 7 ASSOCIATION 19801982 Bone mineral density (spine) 8.69897000434 LOC100288976 LEAD_SNP rs10767942 chr11 32522007 Intergenic 7 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.09691001301 WT1AS - EIF3M LEAD_SNP rs10767971 chr11 32895664 Intergenic 3a ASSOCIATION 19772629 Parkinson's disease (age of onset) 6.30102999566 PRRG4 - QSER1 FUNCTIONAL_SNP rs9943661 chr11 32893777 Intergenic 6 1887 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10437629 chr11 33588210 Intron 7 ASSOCIATION 21423239 Suicide attempts in bipolar disorder 5.39794000867 C11orf41 FUNCTIONAL_SNP rs7117353 chr11 33562973 Intergenic 5b 25237 CEU:1.0;0.848, CHB:0.943;0.843, JPT:0.941;0.886 FUNCTIONAL_SNP rs716844 chr11 33514688 Intergenic 5b 73522 CEU:1.0;0.866, CHB:0.842;0.674, JPT:0.89;0.792 FUNCTIONAL_SNP rs16924378 chr11 33519523 Intergenic 6 68687 CEU:1.0;0.848, CHB:0.829;0.688, JPT:0.882;0.736 FUNCTIONAL_SNP rs2076624 chr11 33563598 Intergenic 7 24612 CEU:1.0;0.848, CHB:0.943;0.843, JPT:0.941;0.886 FUNCTIONAL_SNP rs16924377 chr11 33517880 Intergenic 7 70330 CEU:1.0;1.0 FUNCTIONAL_SNP rs11822320 chr11 33585826 Intron 7 2384 CEU:1.0;0.849, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs12576242 chr11 33587649 Intron 7 561 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs11032297 chr11 33585978 Intron 7 2232 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs5028798 chr11 34605435 Intergenic 5a ASSOCIATION 17903297 Volumetric brain MRI 5.52287874528 ELF5 - EHF FUNCTIONAL_SNP rs1947395 chr11 34607890 Intergenic 4 2455 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.826, YRI:1.0;0.896 FUNCTIONAL_SNP rs896858 chr11 34607021 Intergenic 4 1586 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 LEAD_SNP rs286913 chr11 34655363 Intron 4 ASSOCIATION 21107309 Response to antipsychotic treatment 7.15490195999 EHF LEAD_SNP rs12793173 chr11 34834204 Intergenic 7 ASSOCIATION 21602797 Cystic fibrosis severity 9.0 NDUFB8P3 - APIP FUNCTIONAL_SNP rs11605381 chr11 34847193 Intergenic 2b 12989 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11603640 chr11 34832907 Intergenic 4 1297 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12803664 chr11 34851929 Intergenic 5a 17725 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10501136 chr11 34846516 Intergenic 5b 12312 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11600239 chr11 34821699 Intergenic 7 12505 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1897203 chr11 34821988 Intergenic 7 12216 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7928794 chr11 35701236 Intron 7 ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 5.09691001301 TRIM44 LEAD_SNP rs16930685 chr11 37870981 Intergenic 7 ASSOCIATION 21478494 Cutaneous nevi 5.69897000434 RPL7AP56 - RPL18P8 FUNCTIONAL_SNP rs1515042 chr11 37871392 Intergenic 5b 411 CEU:1.0;1.0, CHB:1.0;0.756, JPT:1.0;0.851 FUNCTIONAL_SNP rs11034450 chr11 37866895 Intergenic 5b 4086 CEU:1.0;1.0, CHB:1.0;0.754, JPT:1.0;0.842 FUNCTIONAL_SNP rs715853 chr11 37866242 Intergenic 6 4739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;0.577 FUNCTIONAL_SNP rs1588836 chr11 37876644 Intergenic 6 5663 CEU:1.0;1.0, CHB:1.0;0.754, JPT:1.0;0.842 FUNCTIONAL_SNP rs12276421 chr11 37873121 Intergenic 6 2140 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs167125 chr11 37872793 Intergenic 6 1812 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.918;0.843 FUNCTIONAL_SNP rs11034449 chr11 37866671 Intergenic 6 4310 CEU:1.0;1.0, CHB:1.0;0.791, JPT:1.0;0.928 FUNCTIONAL_SNP rs292733 chr11 37860110 Intergenic 6 10871 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.928 FUNCTIONAL_SNP rs292774 chr11 37873350 Intergenic 6 2369 CEU:1.0;0.865, CHB:1.0;0.92, JPT:1.0;0.92 FUNCTIONAL_SNP rs10768329 chr11 37857088 Intergenic 6 13893 CEU:1.0;1.0, CHB:1.0;0.756, JPT:0.917;0.776 FUNCTIONAL_SNP rs641565 chr11 37864444 Intergenic 7 6537 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7938154 chr11 37851515 Intergenic 7 19466 CEU:1.0;0.866, CHB:1.0;0.756, JPT:1.0;0.924 FUNCTIONAL_SNP rs16930679 chr11 37870552 Intergenic 7 429 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1399588 chr11 37857857 Intergenic 7 13124 CEU:1.0;0.848, CHB:1.0;0.754, JPT:0.911;0.764 FUNCTIONAL_SNP rs11034433 chr11 37844260 Intergenic 7 26721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924 FUNCTIONAL_SNP rs11034436 chr11 37849799 Intergenic 7 21182 CEU:1.0;0.866, CHB:1.0;0.756, JPT:1.0;0.851 FUNCTIONAL_SNP rs11034452 chr11 37869613 Intergenic 7 1368 CEU:1.0;0.866, CHB:0.74;0.548, JPT:1.0;0.851 FUNCTIONAL_SNP rs11034453 chr11 37869692 Intergenic 7 1289 CEU:1.0;0.848, CHB:1.0;0.754, JPT:1.0;0.842 FUNCTIONAL_SNP rs11034454 chr11 37869859 Intergenic 7 1122 CEU:1.0;1.0, CHB:0.739;0.546, JPT:1.0;0.808 FUNCTIONAL_SNP rs292732 chr11 37860933 Intergenic 7 10048 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;0.924 FUNCTIONAL_SNP rs10836873 chr11 37859556 Intergenic 7 11425 CEU:1.0;0.848, CHB:1.0;0.754, JPT:0.911;0.764 FUNCTIONAL_SNP rs10836874 chr11 37859934 Intergenic 7 11047 CEU:1.0;0.866, CHB:0.811;0.602, JPT:0.915;0.774 FUNCTIONAL_SNP rs292754 chr11 37848312 Intergenic 7 22669 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924 FUNCTIONAL_SNP rs292757 chr11 37842924 Intergenic 7 28057 CEU:1.0;1.0, CHB:1.0;0.601, JPT:1.0;0.924 FUNCTIONAL_SNP rs292769 chr11 37876846 Intergenic 7 5865 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;0.924, YRI:1.0;0.534 FUNCTIONAL_SNP rs292773 chr11 37873453 Intergenic 7 2472 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.928 FUNCTIONAL_SNP rs292778 chr11 37871905 Intergenic 7 924 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909 FUNCTIONAL_SNP rs292782 chr11 37870103 Intergenic 7 878 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;0.577 FUNCTIONAL_SNP rs292784 chr11 37869212 Intergenic 7 1769 CEU:1.0;1.0, CHB:1.0;0.791, JPT:1.0;0.928 FUNCTIONAL_SNP rs1813963 chr11 37863675 Intergenic 7 7306 CEU:1.0;1.0, CHB:1.0;0.754, JPT:0.911;0.764 LEAD_SNP rs12808199 chr11 39327959 Intergenic 5b ASSOCIATION 20548944 Osteoporosis 6.04575749056 RPL18P8 - LRRC4C FUNCTIONAL_SNP rs2088544 chr11 39328525 Intergenic 5b 566 CEU:0.957;0.879, CHB:0.838;0.61, JPT:0.948;0.817 FUNCTIONAL_SNP rs12807582 chr11 39327563 Intergenic 6 396 CEU:1.0;1.0, CHB:0.949;0.821, JPT:1.0;0.953 FUNCTIONAL_SNP rs10734472 chr11 39325576 Intergenic 7 2383 CEU:1.0;1.0, CHB:0.947;0.78, JPT:1.0;0.953 FUNCTIONAL_SNP rs7936529 chr11 39327125 Intergenic 7 834 CEU:1.0;1.0, CHB:1.0;0.87, JPT:1.0;0.953 FUNCTIONAL_SNP rs6485076 chr11 39323021 Intergenic 7 4938 CEU:1.0;0.874, CHB:1.0;0.657, JPT:1.0;0.645 FUNCTIONAL_SNP rs10768470 chr11 39326486 Intergenic 7 1473 CEU:1.0;1.0, CHB:0.947;0.78, JPT:1.0;0.953 LEAD_SNP rs4611189 chr11 40837713 Intron 7 ASSOCIATION 21107309 Reasoning 6.22184874962 LRRC4C - RPL9P23 LEAD_SNP rs1484948 chr11 41852664 Intergenic 6 ASSOCIATION 20031603 RR interval (heart rate) 5.69897000434 RPL9P23 - API5 FUNCTIONAL_SNP rs10837748 chr11 41830523 Exon,non-coding 7 22141 CEU:1.0;0.861, YRI:0.862;0.53 FUNCTIONAL_SNP rs11036607 chr11 41883776 Exon,non-coding 5b 31112 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs291713 chr11 41894587 Intergenic 3a 41923 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1484969 chr11 41828550 Intron 5a 24114 CEU:1.0;0.831, YRI:1.0;0.564 FUNCTIONAL_SNP rs291712 chr11 41894463 Intergenic 5a 41799 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11036588 chr11 41849393 Intergenic 5a 3271 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs12786406 chr11 41879876 Intergenic 5b 27212 CEU:1.0;0.953 FUNCTIONAL_SNP rs1531934 chr11 41824339 Intron 6 28325 CEU:1.0;0.831, YRI:1.0;0.543 FUNCTIONAL_SNP rs7946020 chr11 41829882 Intron 6 22782 CEU:1.0;0.831, YRI:1.0;0.585 FUNCTIONAL_SNP rs7103550 chr11 41879455 Intergenic 6 26791 CEU:1.0;0.953 FUNCTIONAL_SNP rs12787638 chr11 41858841 Intergenic 6 6177 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs16936027 chr11 41884290 Intergenic 6 31626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.522 FUNCTIONAL_SNP rs1484959 chr11 41880193 Intergenic 6 27529 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.938;0.676 FUNCTIONAL_SNP rs10837749 chr11 41831260 Intron 6 21404 CEU:1.0;0.831, YRI:1.0;0.644 FUNCTIONAL_SNP rs1531175 chr11 41824736 Intron 6 27928 CEU:1.0;0.825, YRI:1.0;0.541 FUNCTIONAL_SNP rs291720 chr11 41840775 Intron 6 11889 CEU:1.0;0.831, YRI:1.0;0.697 FUNCTIONAL_SNP rs1385379 chr11 41819536 Intron 6 33128 CEU:1.0;0.831 FUNCTIONAL_SNP rs11036606 chr11 41881984 Intron 6 29320 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.731 FUNCTIONAL_SNP rs11036612 chr11 41887901 Intergenic 6 35237 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7946203 chr11 41829785 Intron 6 22879 CEU:1.0;0.831, YRI:1.0;0.534 FUNCTIONAL_SNP rs4369392 chr11 41832145 Intron 6 20519 CEU:1.0;0.862, YRI:1.0;0.663 FUNCTIONAL_SNP rs12417544 chr11 41832680 Intron 7 19984 CEU:1.0;0.826, YRI:1.0;0.669 FUNCTIONAL_SNP rs7936535 chr11 41869742 Intergenic 7 17078 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs11822106 chr11 41840385 Intron 7 12279 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1531931 chr11 41824562 Intron 7 28102 CEU:1.0;0.831, YRI:1.0;0.543 FUNCTIONAL_SNP rs1531932 chr11 41824482 Intron 7 28182 CEU:1.0;0.831, YRI:1.0;0.543 FUNCTIONAL_SNP rs1510464 chr11 41848448 Intergenic 7 4216 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs1840739 chr11 41830637 Intron 7 22027 CEU:1.0;0.831, YRI:1.0;0.635 FUNCTIONAL_SNP rs1840741 chr11 41874054 Intergenic 7 21390 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.895 FUNCTIONAL_SNP rs11824752 chr11 41846379 Intron 7 6285 CEU:1.0;0.953, YRI:1.0;0.581 FUNCTIONAL_SNP rs11821682 chr11 41864663 Intergenic 7 11999 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs5016183 chr11 41833195 Intron 7 19469 CEU:1.0;0.831, YRI:1.0;0.644 FUNCTIONAL_SNP rs404089 chr11 41837481 Intron 7 15183 CEU:1.0;0.831, YRI:1.0;0.674 FUNCTIONAL_SNP rs1877022 chr11 41842944 Intron 7 9720 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs7127177 chr11 41872840 Intergenic 7 20176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs11036610 chr11 41887290 Intergenic 7 34626 CEU:1.0;0.869 FUNCTIONAL_SNP rs10501277 chr11 41843324 Intron 7 9340 CEU:1.0;0.951, YRI:1.0;0.598 FUNCTIONAL_SNP rs535733 chr11 41835361 Intron 7 17303 CEU:1.0;0.831, YRI:1.0;0.644 FUNCTIONAL_SNP rs4756677 chr11 41872586 Intergenic 7 19922 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2168535 chr11 41823268 Intron 7 29396 CEU:1.0;0.831, YRI:1.0;0.543 FUNCTIONAL_SNP rs1843246 chr11 41814850 Intron 7 37814 CEU:1.0;0.831, YRI:1.0;0.522 FUNCTIONAL_SNP rs437023 chr11 41837907 Intron 7 14757 CEU:1.0;0.831, YRI:1.0;0.644 FUNCTIONAL_SNP rs4533028 chr11 41817357 Intron 7 35307 CEU:1.0;0.831, YRI:1.0;0.541 FUNCTIONAL_SNP rs2862386 chr11 41831911 Intron 7 20753 CEU:1.0;0.831, YRI:1.0;0.644 FUNCTIONAL_SNP rs7945518 chr11 41889506 Intergenic 7 36842 CEU:1.0;0.869 FUNCTIONAL_SNP rs2862384 chr11 41831518 Intron 7 21146 CEU:1.0;0.831, YRI:1.0;0.644 FUNCTIONAL_SNP rs2862385 chr11 41831815 Intron 7 20849 CEU:1.0;0.831, YRI:1.0;0.644 FUNCTIONAL_SNP rs1601333 chr11 41814554 Intron 7 38110 CEU:1.0;0.831, YRI:1.0;0.522 FUNCTIONAL_SNP rs7113017 chr11 41881806 Intron 7 29142 CEU:1.0;0.953 FUNCTIONAL_SNP rs12807116 chr11 41833774 Intron 7 18890 CEU:1.0;0.831, YRI:1.0;0.644 FUNCTIONAL_SNP rs12787037 chr11 41858725 Intergenic 7 6061 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12788885 chr11 41858898 Intergenic 7 6234 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.936 FUNCTIONAL_SNP rs11036572 chr11 41832322 Intron 7 20342 CEU:1.0;0.826, YRI:1.0;0.635 FUNCTIONAL_SNP rs11036573 chr11 41832335 Intron 7 20329 CEU:1.0;0.826, YRI:1.0;0.644 FUNCTIONAL_SNP rs12418996 chr11 41832855 Intron 7 19809 CEU:1.0;0.866, YRI:1.0;0.67 FUNCTIONAL_SNP rs11036599 chr11 41865331 Intergenic 7 12667 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12576500 chr11 41845611 Intron 7 7053 CEU:1.0;0.952, YRI:1.0;0.571 FUNCTIONAL_SNP rs11036603 chr11 41879383 Intergenic 7 26719 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs11036609 chr11 41886491 Intergenic 7 33827 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11036613 chr11 41890590 Intergenic 7 37926 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.634 FUNCTIONAL_SNP rs11036615 chr11 41893605 Intergenic 7 40941 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7129507 chr11 41876372 Intergenic 7 23708 CEU:1.0;0.951 FUNCTIONAL_SNP rs7120856 chr11 41883445 Intron 7 30781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.727 FUNCTIONAL_SNP rs12803566 chr11 41848211 Intergenic 7 4453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 LEAD_SNP rs9300039 chr11 41915366 Intergenic 6 ASSOCIATION 17463248 Type 2 diabetes 7.22184874962 RPL9P23 - API5 LEAD_SNP rs10501293 chr11 43086094 Intergenic 7 ASSOCIATION 19734545 Cognitive performance 5.30102999566 RPL9P23 - API5 FUNCTIONAL_SNP rs10838010 chr11 43122962 Intergenic 5b 36868 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4495880 chr11 43133626 Intergenic 6 47532 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10768913 chr11 43060750 Intergenic 6 25344 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs11037235 chr11 43100381 Intergenic 6 14287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1425850 chr11 43109833 Intergenic 6 23739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10837999 chr11 43068860 Intergenic 6 17234 CEU:1.0;1.0, CHB:1.0;0.915, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs12222341 chr11 43126722 Intergenic 7 40628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2862694 chr11 43064753 Intergenic 7 21341 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs2114087 chr11 43133002 Intergenic 7 46908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11605924 chr11 45873091 Intron 7 ASSOCIATION 20081858 Fasting glucose-related traits 14.0 CRY2 FUNCTIONAL_SNP rs6485644 chr11 45855998 Intergenic 4 17093 CEU:0.96;0.921, CHB:0.935;0.823, JPT:0.899;0.629, YRI:1.0;0.849 FUNCTIONAL_SNP rs7112505 chr11 45840939 Intron 4 32152 CEU:0.96;0.922, CHB:0.935;0.823, JPT:0.899;0.629, YRI:1.0;0.849 FUNCTIONAL_SNP rs6485646 chr11 45865764 Intergenic 5a 7327 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs7105751 chr11 45856973 Intergenic 6 16118 CEU:0.958;0.918, CHB:0.93;0.81, JPT:0.897;0.623, YRI:1.0;0.848 FUNCTIONAL_SNP rs7945565 chr11 45878992 Intron 6 5901 CEU:1.0;0.961, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs11607883 chr11 45839709 Intron 7 33382 CEU:0.96;0.921, CHB:0.855;0.644, JPT:1.0;0.708, YRI:1.0;0.849 FUNCTIONAL_SNP rs7121611 chr11 45864142 Intergenic 7 8949 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs11038672 chr11 45846498 Intron 7 26593 CEU:0.962;0.925, CHB:0.935;0.823, JPT:0.899;0.629, YRI:1.0;0.849 LEAD_SNP rs16938437 chr11 46052575 Intron 5b ASSOCIATION 21102462 Menarche (age at onset) 7.22184874962 PHF21A FUNCTIONAL_SNP rs2863714 chr11 45952311 Exon,non-coding 4 100264 CEU:1.0;1.0, YRI:1.0;0.698 FUNCTIONAL_SNP rs2959095 chr11 46004763 Intron 2b 47812 CEU:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs4756058 chr11 46144668 Intergenic 2b 92093 CEU:1.0;1.0 FUNCTIONAL_SNP rs4756042 chr11 45957478 Intron 3a 95097 CEU:1.0;1.0, YRI:1.0;0.738 FUNCTIONAL_SNP rs7106689 chr11 46122653 Intron 4 70078 CEU:1.0;1.0 FUNCTIONAL_SNP rs2946009 chr11 46015106 Intron 4 37469 CEU:1.0;1.0, YRI:1.0;0.773 FUNCTIONAL_SNP rs2959082 chr11 46072962 Intron 4 20387 CEU:1.0;1.0 FUNCTIONAL_SNP rs7924996 chr11 46118182 Intron 5a 65607 CEU:1.0;1.0 FUNCTIONAL_SNP rs2946006 chr11 46005057 Intron 5a 47518 CEU:1.0;1.0, YRI:1.0;0.529 FUNCTIONAL_SNP rs7942246 chr11 46126373 Intron 5a 73798 CEU:1.0;1.0 FUNCTIONAL_SNP rs7937896 chr11 46117960 Intron 5a 65385 CEU:1.0;1.0 FUNCTIONAL_SNP rs7129942 chr11 46071823 Intron 5b 19248 CEU:1.0;1.0 FUNCTIONAL_SNP rs2959085 chr11 46094361 Intron 5b 41786 CEU:1.0;1.0 FUNCTIONAL_SNP rs6485660 chr11 46071727 Intron 5b 19152 CEU:1.0;1.0 FUNCTIONAL_SNP rs7946524 chr11 46144455 Intergenic 5b 91880 CEU:1.0;1.0 FUNCTIONAL_SNP rs7397035 chr11 46099203 Intron 5b 46628 CEU:1.0;1.0 FUNCTIONAL_SNP rs1401421 chr11 46005829 Intron 5b 46746 CEU:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs2932515 chr11 46105688 Intron 5b 53113 CEU:1.0;1.0 FUNCTIONAL_SNP rs2959103 chr11 45970084 Intron 5b 82491 CEU:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs4756057 chr11 46133493 Intron 6 80918 CEU:1.0;1.0 FUNCTIONAL_SNP rs2932510 chr11 46101718 Intron 6 49143 CEU:1.0;1.0 FUNCTIONAL_SNP rs6485663 chr11 46111576 Intron 6 59001 CEU:1.0;1.0 FUNCTIONAL_SNP rs2932512 chr11 46080899 Intron 6 28324 CEU:1.0;1.0 FUNCTIONAL_SNP rs2932516 chr11 46078384 Intron 6 25809 CEU:1.0;1.0 FUNCTIONAL_SNP rs1490087 chr11 46108410 Intron 6 55835 CEU:1.0;1.0 FUNCTIONAL_SNP rs1907003 chr11 46088495 Intron 6 35920 CEU:1.0;1.0 FUNCTIONAL_SNP rs6485664 chr11 46113140 Intron 6 60565 CEU:1.0;1.0 FUNCTIONAL_SNP rs7103299 chr11 46057427 Intron 6 4852 CEU:1.0;1.0 FUNCTIONAL_SNP rs4756048 chr11 46011088 Intron 6 41487 CEU:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs4756059 chr11 46150619 Intergenic 6 98044 CEU:1.0;1.0 FUNCTIONAL_SNP rs4237661 chr11 46133366 Intron 6 80791 CEU:1.0;1.0 FUNCTIONAL_SNP rs7120227 chr11 46061038 Intron 6 8463 CEU:1.0;1.0 FUNCTIONAL_SNP rs1565412 chr11 46086147 Intron 6 33572 CEU:1.0;1.0 FUNCTIONAL_SNP rs2130471 chr11 46112974 Intron 6 60399 CEU:1.0;1.0 FUNCTIONAL_SNP rs10742773 chr11 45959669 Intron 6 92906 CEU:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs2171895 chr11 46113115 Intron 6 60540 CEU:1.0;1.0 FUNCTIONAL_SNP rs3929339 chr11 46086727 Intron 6 34152 CEU:1.0;1.0 FUNCTIONAL_SNP rs2959104 chr11 46065036 Intron 7 12461 CEU:1.0;1.0 FUNCTIONAL_SNP rs2959083 chr11 46076775 Intron 7 24200 CEU:1.0;1.0 FUNCTIONAL_SNP rs7934681 chr11 45958637 Intron 7 93938 CEU:1.0;1.0, YRI:1.0;0.908 FUNCTIONAL_SNP rs1038733 chr11 46097418 Intron 7 44843 CEU:1.0;1.0 FUNCTIONAL_SNP rs2860433 chr11 45998596 Intron 7 53979 CEU:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs7942083 chr11 46126072 Intron 7 73497 CEU:1.0;1.0 FUNCTIONAL_SNP rs11827687 chr11 46028684 Intron 7 23891 CEU:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs2130469 chr11 46108932 Intron 7 56357 CEU:1.0;1.0 FUNCTIONAL_SNP rs11820849 chr11 46063637 Intron 7 11062 CEU:1.0;1.0 FUNCTIONAL_SNP rs10838558 chr11 46100072 Intron 7 47497 CEU:1.0;1.0 FUNCTIONAL_SNP rs16938429 chr11 46021656 Intron 7 30919 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7934407 chr11 46083743 Intron 7 31168 CEU:1.0;1.0 FUNCTIONAL_SNP rs2945998 chr11 45977617 Intron 7 74958 CEU:1.0;1.0 FUNCTIONAL_SNP rs10838564 chr11 46127313 Intron 7 74738 CEU:1.0;1.0 FUNCTIONAL_SNP rs2013010 chr11 46081258 Intron 7 28683 CEU:1.0;1.0 FUNCTIONAL_SNP rs2946005 chr11 46001229 Intron 7 51346 CEU:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs4756056 chr11 46125575 Intron 7 73000 CEU:1.0;1.0 FUNCTIONAL_SNP rs939106 chr11 45976260 Intron 7 76315 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1994599 chr11 46090423 Intron 7 37848 CEU:1.0;1.0 FUNCTIONAL_SNP rs7934572 chr11 45958648 Intron 7 93927 CEU:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs2946002 chr11 45987895 Intron 7 64680 CEU:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs2959096 chr11 45972868 Intron 7 79707 CEU:1.0;1.0, YRI:1.0;0.773 FUNCTIONAL_SNP rs2959097 chr11 46007377 Intron 7 45198 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11038871 chr11 46379442 Intron 4 ASSOCIATION 20694011 Immunoglobulin A 5.69897000434 DGKZ FUNCTIONAL_SNP rs7476 chr11 46342834 Exon,non-coding 6 36608 CEU:0.953;0.83 FUNCTIONAL_SNP rs10838596 chr11 46336995 Intron 4 42447 CEU:1.0;0.875 FUNCTIONAL_SNP rs3802890 chr11 46534546 Intron 4 155104 CEU:1.0;1.0, CHB:1.0;0.535, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs7949282 chr11 46522306 Intron 5b 142864 CEU:1.0;1.0, CHB:1.0;0.535, JPT:1.0;0.91, YRI:1.0;0.825 FUNCTIONAL_SNP rs11038866 chr11 46355932 Intron 5b 23510 CEU:1.0;1.0, JPT:0.902;0.632, YRI:1.0;0.792 FUNCTIONAL_SNP rs7949371 chr11 46522304 Intron 5b 142862 CEU:1.0;1.0, CHB:1.0;0.535, JPT:1.0;0.91, YRI:1.0;0.825 FUNCTIONAL_SNP rs7925678 chr11 46570859 Intron 6 191417 CEU:1.0;1.0, CHB:1.0;0.516, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs11038910 chr11 46543524 Intron 7 164082 CEU:1.0;0.955, CHB:1.0;0.535, JPT:1.0;0.91, YRI:1.0;0.825 FUNCTIONAL_SNP rs17787804 chr11 46506885 Intron 7 127443 CEU:1.0;0.955, CHB:1.0;0.535, JPT:1.0;0.91, YRI:1.0;0.825 LEAD_SNP rs7932354 chr11 46722221 Intergenic 2b ASSOCIATION 19801982 Bone mineral density (hip) 8.39794000867 ARHGAP1;ZNF408 FUNCTIONAL_SNP rs13448 chr11 46695414 Exon,non-coding 5b 26807 CEU:1.0;0.879, CHB:0.947;0.777, JPT:0.943;0.733 FUNCTIONAL_SNP rs4606447 chr11 46691737 Intron 2b 30484 CEU:1.0;0.939, CHB:0.892;0.66, JPT:0.94;0.72, YRI:1.0;1.0 FUNCTIONAL_SNP rs6485690 chr11 46798631 Intron 3b 76410 CEU:1.0;0.835, CHB:0.95;0.821, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2070852 chr11 46744925 Intron 5b 22704 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12361673 chr11 46723937 Intron 7 1716 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10769205 chr11 46723603 Intron 7 1382 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1007738 chr11 46849360 Intron 5b ASSOCIATION 19079262 Bone mineral density (hip) 6.15490195999 CKAP5 FUNCTIONAL_SNP rs3816614 chr11 46890165 Coding 5b 40805 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.912 FUNCTIONAL_SNP rs6485692 chr11 46804583 Intron 3a 44777 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs964551 chr11 46897995 Intron 5b 48635 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.913 FUNCTIONAL_SNP rs10734548 chr11 46787573 Intron 5b 61787 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.913 FUNCTIONAL_SNP rs10734549 chr11 46822686 Intron 5b 26674 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7943866 chr11 46881954 Intron 6 32594 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.913 FUNCTIONAL_SNP rs7107778 chr11 46860855 Intron 6 11495 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs10769208 chr11 46822240 Intron 6 27120 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs10769211 chr11 46872873 Intron 6 23513 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.913 FUNCTIONAL_SNP rs7480140 chr11 46856335 Intron 6 6975 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs1551744 chr11 46865000 Intron 6 15640 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7101374 chr11 46824241 Intron 6 25119 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7929294 chr11 46776176 Intron 6 73184 CEU:1.0;0.846, CHB:1.0;0.952, JPT:1.0;0.906, YRI:1.0;0.954 FUNCTIONAL_SNP rs7940578 chr11 46812227 Intron 6 37133 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs2306026 chr11 46889713 Intron 6 40353 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.956;0.913 FUNCTIONAL_SNP rs4294527 chr11 46828799 Intron 7 20561 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2306029 chr11 46893108 Coding 5b ASSOCIATION 21502573 D-dimer levels 5.09691001301 LRP4 FUNCTIONAL_SNP rs3136516 chr11 46760756 Intron 4 132352 CEU:0.957;0.843, CHB:0.936;0.641 FUNCTIONAL_SNP rs11038993 chr11 46810916 Intron 7 82192 CEU:0.956;0.84, CHB:1.0;0.692, YRI:1.0;0.577 FUNCTIONAL_SNP rs4506602 chr11 46815633 Intron 7 77475 CEU:1.0;0.838, CHB:1.0;0.581, YRI:1.0;0.577 LEAD_SNP rs7117404 chr11 47127153 Intron 5b ASSOCIATION 21502573 D-dimer levels 5.04575749056 C11orf49 LEAD_SNP rs7120118 chr11 47286290 Intron 5b ASSOCIATION 19060910 HDL cholesterol 7.39794000867 NR1H3 FUNCTIONAL_SNP rs3758673 chr11 47278917 Intron 4 7373 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.963;0.927 FUNCTIONAL_SNP rs830085 chr11 47251199 Intron 6 35091 CEU:1.0;1.0, CHB:1.0;0.901, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2013867 chr11 47260272 Intron 6 26018 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs7395581 chr11 47246397 Intron 6 39893 CEU:1.0;0.945, CHB:1.0;0.897, JPT:1.0;0.939, YRI:1.0;0.963 LEAD_SNP rs7944584 chr11 47336320 Intron 5b ASSOCIATION 20081858 Fasting glucose-related traits 17.6989700043 MADD FUNCTIONAL_SNP rs11039149 chr11 47276675 Intron 2b 59645 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10501320 chr11 47293799 Intron 2b 42521 CEU:1.0;0.908 FUNCTIONAL_SNP rs11039165 chr11 47312689 Intron 2c 23631 CEU:0.949;0.858, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11039182 chr11 47346723 Intron 5b 10403 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs3817334 chr11 47650993 Intron 6 ASSOCIATION 20935630 Body mass index 11.6989700043 MTCH2 FUNCTIONAL_SNP rs1064608 chr11 47640429 Coding 6 10564 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9909 chr11 47799775 Exon,non-coding 6 148782 CEU:1.0;0.85, CHB:1.0;0.901, JPT:0.947;0.898 FUNCTIONAL_SNP rs12419692 chr11 47624714 Intergenic 5b 26279 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs34958982 chr11 47547046 Intron 5b 103947 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7124681 chr11 47529947 Intron 5b 121046 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1317149 chr11 47486885 Intergenic 5b 164108 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs17788930 chr11 47752775 Intron 6 101782 CEU:1.0;0.853, CHB:1.0;0.95, JPT:1.0;0.952 FUNCTIONAL_SNP rs7928842 chr11 47566352 Intron 6 84641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs7105282 chr11 47805614 Intron 6 154621 CEU:1.0;0.853, CHB:1.0;0.901, JPT:1.0;0.859 FUNCTIONAL_SNP rs2290850 chr11 47807774 Intron 6 156781 CEU:1.0;0.853, CHB:1.0;0.901, JPT:0.947;0.853 FUNCTIONAL_SNP rs12794570 chr11 47658314 Intron 6 7321 CEU:1.0;0.81, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10838738 chr11 47663049 Intron 6 12056 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10838747 chr11 47716324 Intron 6 65331 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs10838757 chr11 47763016 Intron 6 112023 CEU:1.0;0.853, CHB:1.0;0.95, JPT:1.0;0.952 FUNCTIONAL_SNP rs3817335 chr11 47643891 Intron 6 7102 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs12787112 chr11 47687147 Intron 6 36154 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs4752845 chr11 47539697 Intron 6 111296 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7947730 chr11 47786184 Intron 6 135191 CEU:1.0;0.853, CHB:1.0;0.901, JPT:0.947;0.853 FUNCTIONAL_SNP rs4752856 chr11 47648042 Intron 6 2951 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4752857 chr11 47655752 Intron 6 4759 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7927771 chr11 47781306 Intron 6 130313 CEU:1.0;0.853 FUNCTIONAL_SNP rs10838748 chr11 47716381 Intron 7 65388 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs12798346 chr11 47583121 Intergenic 7 67872 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;0.951 LEAD_SNP rs10838738 chr11 47663049 Intron 6 ASSOCIATION 19079261 Body mass index 8.30102999566 MTCH2 FUNCTIONAL_SNP rs1064608 chr11 47640429 Coding 6 22620 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs34958982 chr11 47547046 Intron 5b 116003 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1317149 chr11 47486885 Intergenic 5b 176164 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs12419692 chr11 47624714 Intergenic 5b 38335 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2290850 chr11 47807774 Intron 6 144725 CEU:1.0;1.0, CHB:1.0;0.901, JPT:0.947;0.853, YRI:1.0;1.0 FUNCTIONAL_SNP rs12787112 chr11 47687147 Intron 6 24098 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs17788930 chr11 47752775 Intron 6 89726 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs10838747 chr11 47716324 Intron 6 53275 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs12794570 chr11 47658314 Intron 6 4735 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4752845 chr11 47539697 Intron 6 123352 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4752856 chr11 47648042 Intron 6 15007 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4752857 chr11 47655752 Intron 6 7297 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7947730 chr11 47786184 Intron 6 123135 CEU:1.0;1.0, CHB:1.0;0.901, JPT:0.947;0.853, YRI:1.0;1.0 FUNCTIONAL_SNP rs12798346 chr11 47583121 Intergenic 7 79928 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;1.0 LEAD_SNP rs11039571 chr11 48207259 Intergenic 6 ASSOCIATION 21502573 D-dimer levels 5.04575749056 PTPRJ - OR4B1 FUNCTIONAL_SNP rs16905753 chr11 48285906 Coding 7 78647 CEU:1.0;1.0, CHB:1.0;0.845, JPT:1.0;1.0, YRI:1.0;0.72 FUNCTIONAL_SNP rs10838881 chr11 48387275 Coding 7 180016 CEU:1.0;1.0, CHB:1.0;0.845, JPT:1.0;1.0, YRI:1.0;0.72 FUNCTIONAL_SNP rs2270993 chr11 48145166 Coding 2b 62093 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs10838833 chr11 48238880 Coding 5b 31621 CEU:1.0;1.0, CHB:1.0;0.845, JPT:1.0;1.0, YRI:1.0;0.72 FUNCTIONAL_SNP rs7120775 chr11 48266736 Coding 7 59477 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.69 FUNCTIONAL_SNP rs17198607 chr11 48028343 Intron 4 178916 CEU:1.0;0.878 FUNCTIONAL_SNP rs3741410 chr11 48168664 Intron 5a 38595 CEU:1.0;0.889, CHB:0.818;0.669, JPT:1.0;1.0 FUNCTIONAL_SNP rs17198985 chr11 48183565 Intron 5a 23694 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs7945174 chr11 48365757 Intron 5b 158498 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.69 FUNCTIONAL_SNP rs7113857 chr11 48141859 Intron 6 65400 CEU:1.0;1.0, CHB:0.818;0.669, JPT:1.0;1.0 FUNCTIONAL_SNP rs624348 chr11 48400795 Intergenic 6 193536 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs10838835 chr11 48246457 Intergenic 6 39198 CEU:1.0;1.0, CHB:1.0;0.845, JPT:1.0;1.0, YRI:0.952;0.68 FUNCTIONAL_SNP rs1351696 chr11 48382471 Intron 7 175212 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.718 FUNCTIONAL_SNP rs7949865 chr11 48346202 Intergenic 7 138943 CEU:1.0;1.0, CHB:1.0;0.845, JPT:1.0;1.0, YRI:1.0;0.72 FUNCTIONAL_SNP rs2200183 chr11 48388394 Intron 7 181135 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.718 FUNCTIONAL_SNP rs7129364 chr11 48150576 Intron 7 56683 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;1.0 FUNCTIONAL_SNP rs7952205 chr11 48199227 Intergenic 7 8032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10838880 chr11 48386988 Intron 7 179729 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.69 FUNCTIONAL_SNP rs12289516 chr11 48234680 Intergenic 7 27421 CEU:1.0;1.0, CHB:0.818;0.669, JPT:1.0;1.0 FUNCTIONAL_SNP rs7121333 chr11 48332138 Intergenic 7 124879 CEU:1.0;1.0, CHB:1.0;0.672, JPT:1.0;0.762 FUNCTIONAL_SNP rs11039674 chr11 48336116 Intergenic 7 128857 CEU:1.0;1.0, CHB:1.0;0.67, JPT:1.0;0.752 FUNCTIONAL_SNP rs1316604 chr11 48279796 Intergenic 7 72537 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.72 LEAD_SNP rs1351696 chr11 48382471 Intron 7 ASSOCIATION 21502573 D-dimer levels 5.09691001301 OR4C17P - OR4C5 FUNCTIONAL_SNP rs7120775 chr11 48266736 Coding 7 115735 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs16905753 chr11 48285906 Coding 7 96565 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10838833 chr11 48238880 Coding 5b 143591 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10838881 chr11 48387275 Coding 7 4804 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17198985 chr11 48183565 Intron 5a 198906 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.697 FUNCTIONAL_SNP rs7945174 chr11 48365757 Intron 5b 16714 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6485831 chr11 48455031 Intergenic 6 72560 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs10838835 chr11 48246457 Intergenic 6 136014 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs11039571 chr11 48207259 Intergenic 6 175212 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.718 FUNCTIONAL_SNP rs10769370 chr11 48515430 Intergenic 6 132959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.918;0.843, YRI:1.0;0.963 FUNCTIONAL_SNP rs624348 chr11 48400795 Intergenic 6 18324 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10838913 chr11 48497700 Intergenic 7 115229 CEU:1.0;1.0, CHB:1.0;0.905, JPT:1.0;0.924 FUNCTIONAL_SNP rs11039760 chr11 48479009 Intergenic 7 96538 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;0.925 FUNCTIONAL_SNP rs7121333 chr11 48332138 Intergenic 7 50333 CEU:1.0;1.0, CHB:1.0;0.835, JPT:1.0;0.804 FUNCTIONAL_SNP rs7942284 chr11 48520424 Intergenic 7 137953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;0.85 FUNCTIONAL_SNP rs7102865 chr11 48458361 Intergenic 7 75890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:0.96;0.823 FUNCTIONAL_SNP rs7942042 chr11 48520270 Intergenic 7 137799 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.925, YRI:0.959;0.738 FUNCTIONAL_SNP rs7949865 chr11 48346202 Intergenic 7 36269 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9667626 chr11 48485877 Intergenic 7 103406 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.922;0.85, YRI:1.0;0.85 FUNCTIONAL_SNP rs11039798 chr11 48540223 Intergenic 7 157752 CEU:1.0;0.913 FUNCTIONAL_SNP rs11039674 chr11 48336116 Intergenic 7 46355 CEU:1.0;1.0, CHB:1.0;0.834, JPT:1.0;0.798 FUNCTIONAL_SNP rs10838880 chr11 48386988 Intron 7 4517 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs7952205 chr11 48199227 Intergenic 7 183244 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.661 FUNCTIONAL_SNP rs6485848 chr11 48541517 Intergenic 7 159046 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.922;0.85, YRI:1.0;0.85 FUNCTIONAL_SNP rs6485856 chr11 48556298 Intergenic 7 173827 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.923;0.851, YRI:0.96;0.796 FUNCTIONAL_SNP rs12221667 chr11 48548549 Intergenic 7 166078 CEU:1.0;0.907, CHB:1.0;1.0 FUNCTIONAL_SNP rs12289516 chr11 48234680 Intergenic 7 147791 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;0.759 FUNCTIONAL_SNP rs2200183 chr11 48388394 Intron 7 5923 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7924372 chr11 48556319 Intergenic 7 173848 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;0.861 FUNCTIONAL_SNP rs7105402 chr11 48411023 Intergenic 7 28552 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1316604 chr11 48279796 Intergenic 7 102675 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7395662 chr11 48518893 Intergenic 6 ASSOCIATION 19060911 HDL cholesterol 10.2218487496 OR4A46P FUNCTIONAL_SNP rs7103557 chr11 48510654 Coding 7 8239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.964 FUNCTIONAL_SNP rs4882016 chr11 48570125 Intergenic 6 51232 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs11039851 chr11 48600839 Intergenic 6 81946 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs4882141 chr11 48627525 Intergenic 6 108632 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs7924481 chr11 48582457 Intergenic 6 63564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs6485882 chr11 48592435 Intergenic 6 73542 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10838954 chr11 48579323 Intergenic 6 60430 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs10769382 chr11 48590415 Intergenic 6 71522 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs11039779 chr11 48517895 Intergenic 7 998 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.926 FUNCTIONAL_SNP rs11039800 chr11 48542579 Intergenic 7 23686 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs7121992 chr11 48592582 Intergenic 7 73689 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs11039819 chr11 48562181 Intergenic 7 43288 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs11039820 chr11 48562252 Intergenic 7 43359 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs11039871 chr11 48626620 Intergenic 7 107727 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4882096 chr11 48534102 Intergenic 7 15209 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4882130 chr11 48588954 Intergenic 7 70061 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4882132 chr11 48593125 Intergenic 7 74232 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs12365014 chr11 48629434 Intergenic 7 110541 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4882129 chr11 48588774 Intergenic 7 69881 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs7951432 chr11 48591280 Intergenic 7 72387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs7479134 chr11 48625409 Intergenic 7 106516 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs10838921 chr11 48531452 Intergenic 7 12559 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;0.958 FUNCTIONAL_SNP rs10838932 chr11 48541001 Intergenic 7 22108 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10838943 chr11 48557442 Intergenic 7 38549 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs12365220 chr11 48555957 Intergenic 7 37064 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs10838956 chr11 48581765 Intergenic 7 62872 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs12363679 chr11 48556023 Intergenic 7 37130 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 LEAD_SNP rs7927370 chr11 55136219 Coding 7 ASSOCIATION 21408207 Systemic lupus erythematosus 5.15490195999 OR4A15 FUNCTIONAL_SNP rs17581700 chr11 55322606 Coding 7 186387 CEU:1.0;1.0 FUNCTIONAL_SNP rs7121804 chr11 55111222 Coding 7 24997 CEU:1.0;1.0 FUNCTIONAL_SNP rs17581532 chr11 55321823 Coding 7 185604 CEU:1.0;1.0 FUNCTIONAL_SNP rs11821230 chr11 55064967 Exon,non-coding 7 71252 CEU:1.0;1.0 FUNCTIONAL_SNP rs11823212 chr11 55159844 Intergenic 5a 23625 CEU:1.0;1.0 FUNCTIONAL_SNP rs7952701 chr11 55289006 Intergenic 5a 152787 CEU:1.0;1.0 FUNCTIONAL_SNP rs4316524 chr11 55159965 Intergenic 5a 23746 CEU:1.0;1.0 FUNCTIONAL_SNP rs7109010 chr11 55137386 Intergenic 5a 1167 CEU:1.0;1.0 FUNCTIONAL_SNP rs7935445 chr11 55288780 Intergenic 5a 152561 CEU:1.0;1.0 FUNCTIONAL_SNP rs7101448 chr11 55133222 Intergenic 6 2997 CEU:1.0;1.0 FUNCTIONAL_SNP rs17492508 chr11 55091619 Intergenic 6 44600 CEU:1.0;1.0 FUNCTIONAL_SNP rs2216993 chr11 55236954 Intergenic 6 100735 CEU:1.0;1.0 FUNCTIONAL_SNP rs17580581 chr11 55303299 Intergenic 6 167080 CEU:1.0;1.0 FUNCTIONAL_SNP rs11826609 chr11 55297635 Intergenic 6 161416 CEU:1.0;1.0 FUNCTIONAL_SNP rs17492571 chr11 55129994 Intergenic 6 6225 CEU:1.0;1.0 FUNCTIONAL_SNP rs17496160 chr11 55314073 Intergenic 6 177854 CEU:1.0;1.0 FUNCTIONAL_SNP rs17495142 chr11 55282594 Intergenic 6 146375 CEU:1.0;1.0 FUNCTIONAL_SNP rs7121555 chr11 55268934 Intergenic 6 132715 CEU:1.0;1.0 FUNCTIONAL_SNP rs7938739 chr11 55206830 Intergenic 6 70611 CEU:1.0;1.0 FUNCTIONAL_SNP rs9666744 chr11 55276602 Intergenic 6 140383 CEU:1.0;1.0 FUNCTIONAL_SNP rs7950542 chr11 55292605 Intergenic 6 156386 CEU:1.0;1.0 FUNCTIONAL_SNP rs17581261 chr11 55318210 Intergenic 6 181991 CEU:1.0;1.0 FUNCTIONAL_SNP rs10501335 chr11 55306577 Intergenic 6 170358 CEU:1.0;1.0 FUNCTIONAL_SNP rs7946976 chr11 55206920 Intergenic 6 70701 CEU:1.0;1.0 FUNCTIONAL_SNP rs7941860 chr11 55270188 Intergenic 6 133969 CEU:1.0;1.0 FUNCTIONAL_SNP rs17494249 chr11 55258881 Intergenic 6 122662 CEU:1.0;1.0 FUNCTIONAL_SNP rs7112469 chr11 55266600 Intergenic 6 130381 CEU:1.0;1.0 FUNCTIONAL_SNP rs17581337 chr11 55319882 Intergenic 6 183663 CEU:1.0;1.0 FUNCTIONAL_SNP rs1364762 chr11 55197913 Intergenic 6 61694 CEU:1.0;1.0 FUNCTIONAL_SNP rs11823401 chr11 55274744 Intergenic 6 138525 CEU:1.0;1.0 FUNCTIONAL_SNP rs7109436 chr11 55141349 Intergenic 6 5130 CEU:1.0;1.0 FUNCTIONAL_SNP rs2113916 chr11 55197672 Intergenic 6 61453 CEU:1.0;1.0 FUNCTIONAL_SNP rs17580938 chr11 55311980 Intergenic 6 175761 CEU:1.0;1.0 FUNCTIONAL_SNP rs17493401 chr11 55171930 Intergenic 6 35711 CEU:1.0;1.0 FUNCTIONAL_SNP rs1504670 chr11 55321254 Intergenic 6 185035 CEU:1.0;1.0 FUNCTIONAL_SNP rs1504671 chr11 55321156 Intergenic 6 184937 CEU:1.0;1.0 FUNCTIONAL_SNP rs11827117 chr11 55315605 Intergenic 6 179386 CEU:1.0;1.0 FUNCTIONAL_SNP rs7116208 chr11 55212816 Intergenic 6 76597 CEU:1.0;1.0 FUNCTIONAL_SNP rs4537777 chr11 55241556 Intergenic 6 105337 CEU:1.0;1.0 FUNCTIONAL_SNP rs4567485 chr11 55087615 Intergenic 6 48604 CEU:1.0;1.0 FUNCTIONAL_SNP rs7943624 chr11 55079850 Intergenic 6 56369 CEU:1.0;1.0 FUNCTIONAL_SNP rs7943639 chr11 55079897 Intergenic 6 56322 CEU:1.0;1.0 FUNCTIONAL_SNP rs11828727 chr11 55273890 Intergenic 6 137671 CEU:1.0;1.0 FUNCTIONAL_SNP rs17581051 chr11 55314303 Intergenic 6 178084 CEU:1.0;1.0 FUNCTIONAL_SNP rs11827201 chr11 55238296 Intergenic 7 102077 CEU:1.0;1.0 FUNCTIONAL_SNP rs7103234 chr11 55141298 Intergenic 7 5079 CEU:1.0;1.0 FUNCTIONAL_SNP rs2155029 chr11 55211811 Intergenic 7 75592 CEU:1.0;1.0 FUNCTIONAL_SNP rs17495071 chr11 55278447 Intergenic 7 142228 CEU:1.0;1.0 FUNCTIONAL_SNP rs7128617 chr11 55245650 Intergenic 7 109431 CEU:1.0;1.0 FUNCTIONAL_SNP rs17495303 chr11 55290011 Intergenic 7 153792 CEU:1.0;1.0 FUNCTIONAL_SNP rs17494536 chr11 55261272 Intergenic 7 125053 CEU:1.0;1.0 FUNCTIONAL_SNP rs7106100 chr11 55219382 Intergenic 7 83163 CEU:1.0;1.0 FUNCTIONAL_SNP rs9666121 chr11 55272448 Intergenic 7 136229 CEU:1.0;1.0 FUNCTIONAL_SNP rs17580623 chr11 55303486 Intergenic 7 167267 CEU:1.0;1.0 FUNCTIONAL_SNP rs17492564 chr11 55129798 Intergenic 7 6421 CEU:1.0;1.0 FUNCTIONAL_SNP rs17496444 chr11 55319012 Intergenic 7 182793 CEU:1.0;1.0 FUNCTIONAL_SNP rs17493596 chr11 55200610 Intergenic 7 64391 CEU:1.0;1.0 FUNCTIONAL_SNP rs7950956 chr11 55270137 Intergenic 7 133918 CEU:1.0;0.866 FUNCTIONAL_SNP rs488213 chr11 55271407 Intergenic 7 135188 CEU:1.0;1.0 FUNCTIONAL_SNP rs17581191 chr11 55316023 Intergenic 7 179804 CEU:1.0;1.0 FUNCTIONAL_SNP rs7121552 chr11 55141150 Intergenic 7 4931 CEU:1.0;1.0 FUNCTIONAL_SNP rs9667732 chr11 55272520 Intergenic 7 136301 CEU:1.0;1.0 FUNCTIONAL_SNP rs17580694 chr11 55304199 Intergenic 7 167980 CEU:1.0;1.0 FUNCTIONAL_SNP rs7941275 chr11 55269686 Intergenic 7 133467 CEU:1.0;1.0 FUNCTIONAL_SNP rs17581742 chr11 55326524 Intergenic 7 190305 CEU:1.0;1.0 FUNCTIONAL_SNP rs17578661 chr11 55205325 Intergenic 7 69106 CEU:1.0;1.0 FUNCTIONAL_SNP rs979111 chr11 55171027 Intergenic 7 34808 CEU:1.0;1.0 FUNCTIONAL_SNP rs7110861 chr11 55270679 Intergenic 7 134460 CEU:1.0;0.865 FUNCTIONAL_SNP rs9666260 chr11 55272410 Intergenic 7 136191 CEU:1.0;1.0 FUNCTIONAL_SNP rs17493710 chr11 55204758 Intergenic 7 68539 CEU:1.0;1.0 FUNCTIONAL_SNP rs10501336 chr11 55315519 Intergenic 7 179300 CEU:1.0;1.0 FUNCTIONAL_SNP rs2042591 chr11 55222990 Intergenic 7 86771 CEU:1.0;1.0 FUNCTIONAL_SNP rs7125031 chr11 55215074 Intergenic 7 78855 CEU:1.0;0.866 FUNCTIONAL_SNP rs11823346 chr11 55214688 Intergenic 7 78469 CEU:1.0;1.0 FUNCTIONAL_SNP rs530679 chr11 55271372 Intergenic 7 135153 CEU:1.0;1.0 FUNCTIONAL_SNP rs11819779 chr11 55065192 Intron 7 71027 CEU:1.0;1.0 FUNCTIONAL_SNP rs982276 chr11 55320099 Intergenic 7 183880 CEU:1.0;1.0 FUNCTIONAL_SNP rs17580294 chr11 55296106 Intergenic 7 159887 CEU:1.0;1.0 FUNCTIONAL_SNP rs7115527 chr11 55268855 Intergenic 7 132636 CEU:1.0;1.0 FUNCTIONAL_SNP rs1216215 chr11 55184504 Intergenic 7 48285 CEU:1.0;1.0 FUNCTIONAL_SNP rs17580301 chr11 55296148 Intergenic 7 159929 CEU:1.0;1.0 FUNCTIONAL_SNP rs1364765 chr11 55196818 Intergenic 7 60599 CEU:1.0;1.0 FUNCTIONAL_SNP rs1425195 chr11 55195255 Intergenic 7 59036 CEU:1.0;1.0 FUNCTIONAL_SNP rs17579825 chr11 55277617 Intergenic 7 141398 CEU:1.0;1.0 FUNCTIONAL_SNP rs17579334 chr11 55261146 Intergenic 7 124927 CEU:1.0;1.0 FUNCTIONAL_SNP rs17579348 chr11 55261238 Intergenic 7 125019 CEU:1.0;1.0 FUNCTIONAL_SNP rs11828054 chr11 55297562 Intergenic 7 161343 CEU:1.0;1.0 FUNCTIONAL_SNP rs6591332 chr11 55030270 Intron 7 105949 CEU:1.0;1.0 FUNCTIONAL_SNP rs7127405 chr11 55132783 Intergenic 7 3436 CEU:1.0;1.0 FUNCTIONAL_SNP rs7103342 chr11 55268805 Intergenic 7 132586 CEU:1.0;1.0 FUNCTIONAL_SNP rs17579895 chr11 55278100 Intergenic 7 141881 CEU:1.0;1.0 FUNCTIONAL_SNP rs2196203 chr11 54995757 Intergenic 7 140462 CEU:1.0;0.866 FUNCTIONAL_SNP rs17579755 chr11 55273190 Intergenic 7 136971 CEU:1.0;1.0 FUNCTIONAL_SNP rs17495950 chr11 55306548 Intergenic 7 170329 CEU:1.0;1.0 FUNCTIONAL_SNP rs2194835 chr11 55237265 Intergenic 7 101046 CEU:1.0;1.0 FUNCTIONAL_SNP rs17578388 chr11 55200433 Intergenic 7 64214 CEU:1.0;1.0 FUNCTIONAL_SNP rs548768 chr11 55269362 Intergenic 7 133143 CEU:1.0;1.0 FUNCTIONAL_SNP rs1459105 chr11 55317617 Intergenic 7 181398 CEU:1.0;1.0 FUNCTIONAL_SNP rs1459106 chr11 55317814 Intergenic 7 181595 CEU:1.0;1.0 FUNCTIONAL_SNP rs7950755 chr11 55269990 Intergenic 7 133771 CEU:1.0;1.0 FUNCTIONAL_SNP rs17580966 chr11 55312550 Intergenic 7 176331 CEU:1.0;1.0 FUNCTIONAL_SNP rs11819957 chr11 55304262 Intergenic 7 168043 CEU:1.0;1.0 FUNCTIONAL_SNP rs17580994 chr11 55312897 Intergenic 7 176678 CEU:1.0;1.0 FUNCTIONAL_SNP rs17581303 chr11 55318698 Intergenic 7 182479 CEU:1.0;1.0 FUNCTIONAL_SNP rs11819980 chr11 55304399 Intergenic 7 168180 CEU:1.0;1.0 FUNCTIONAL_SNP rs17494990 chr11 55277761 Intergenic 7 141542 CEU:1.0;1.0 FUNCTIONAL_SNP rs6591439 chr11 55179208 Intergenic 7 42989 CEU:1.0;1.0 FUNCTIONAL_SNP rs7930341 chr11 55269816 Intergenic 7 133597 CEU:1.0;1.0 FUNCTIONAL_SNP rs11822057 chr11 55242495 Intergenic 7 106276 CEU:1.0;1.0 FUNCTIONAL_SNP rs6591466 chr11 55213206 Intergenic 7 76987 CEU:1.0;1.0 FUNCTIONAL_SNP rs7102958 chr11 55298631 Intergenic 7 162412 CEU:1.0;1.0 FUNCTIONAL_SNP rs17578479 chr11 55203672 Intergenic 7 67453 CEU:1.0;1.0 FUNCTIONAL_SNP rs17496054 chr11 55310280 Intergenic 7 174061 CEU:1.0;1.0 FUNCTIONAL_SNP rs505338 chr11 55320583 Intergenic 7 184364 CEU:1.0;1.0 LEAD_SNP rs1397048 chr11 56466099 Intergenic 7 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 7.15490195999 OR9G1;OR9G9 FUNCTIONAL_SNP rs532637 chr11 56468020 Coding 5b 1921 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7109249 chr11 56453126 Intergenic 7 12973 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.944 FUNCTIONAL_SNP rs7113794 chr11 56454288 Intergenic 7 11811 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.944 FUNCTIONAL_SNP rs10896513 chr11 56467085 Intergenic 7 986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.945 FUNCTIONAL_SNP rs7130569 chr11 56441125 Intergenic 7 24974 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;0.944 FUNCTIONAL_SNP rs1509995 chr11 56465305 Intergenic 7 794 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs526934 chr11 59633493 Intron 6 ASSOCIATION 19303062 Folate pathway vitamin levels 5.69897000434 TCN1 LEAD_SNP rs610932 chr11 59939307 Exon,non-coding 7 ASSOCIATION 21460840 Alzheimer's disease 13.6989700043 MS4A6A FUNCTIONAL_SNP rs583791 chr11 59947252 Coding 7 7945 CEU:1.0;1.0, CHB:1.0;0.896, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs12453 chr11 59945745 Coding 5b 6438 CEU:1.0;0.889 FUNCTIONAL_SNP rs667897 chr11 59936979 Intergenic 2b 2328 CEU:1.0;0.849, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs7933202 chr11 59936926 Intergenic 2b 2381 CEU:1.0;0.887 FUNCTIONAL_SNP rs7926344 chr11 59962166 Intergenic 3a 22859 CEU:0.959;0.849 FUNCTIONAL_SNP rs10897011 chr11 59961427 Intergenic 4 22120 CEU:0.956;0.84 FUNCTIONAL_SNP rs502419 chr11 59866175 Intergenic 4 73132 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888 FUNCTIONAL_SNP rs617135 chr11 59936757 Intergenic 4 2550 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs564912 chr11 59885888 Intergenic 4 53419 CEU:0.958;0.881, JPT:1.0;0.632 FUNCTIONAL_SNP rs107903 chr11 59926256 Intergenic 4 13051 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888, YRI:0.885;0.755 FUNCTIONAL_SNP rs602396 chr11 59927484 Intron 4 11823 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888 FUNCTIONAL_SNP rs11230180 chr11 59961486 Intergenic 4 22179 CEU:0.959;0.849 FUNCTIONAL_SNP rs2847663 chr11 59858036 Intron 5a 81271 CEU:1.0;0.849 FUNCTIONAL_SNP rs11605427 chr11 59928672 Intergenic 5a 10635 CEU:1.0;0.889 FUNCTIONAL_SNP rs1303615 chr11 59885120 Intergenic 5b 54187 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888, YRI:0.885;0.755 FUNCTIONAL_SNP rs17529983 chr11 59927039 Intergenic 5b 12268 CEU:0.957;0.811 FUNCTIONAL_SNP rs2123314 chr11 59966295 Intergenic 5b 26988 CEU:0.959;0.849 FUNCTIONAL_SNP rs502581 chr11 59860178 Intron 5b 79129 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888 FUNCTIONAL_SNP rs632185 chr11 59951433 Intron 5b 12126 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.944, YRI:0.915;0.693 FUNCTIONAL_SNP rs580064 chr11 59869119 Intergenic 5b 70188 CEU:1.0;0.822, JPT:0.927;0.563 FUNCTIONAL_SNP rs17602572 chr11 59948374 Intron 6 9067 CEU:1.0;0.889 FUNCTIONAL_SNP rs581133 chr11 59882306 Intergenic 6 57001 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888 FUNCTIONAL_SNP rs624663 chr11 59945065 Intron 6 5758 CEU:1.0;1.0, CHB:1.0;0.889, JPT:1.0;1.0 FUNCTIONAL_SNP rs652354 chr11 59923991 Intergenic 6 15316 CEU:1.0;0.889, CHB:0.883;0.701, JPT:0.942;0.888, YRI:0.849;0.722 FUNCTIONAL_SNP rs1303621 chr11 59890674 Intergenic 6 48633 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888, YRI:1.0;0.802 FUNCTIONAL_SNP rs574695 chr11 59881524 Intergenic 6 57783 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888 FUNCTIONAL_SNP rs1441586 chr11 59856028 Intergenic 6 83279 CEU:1.0;0.925, CHB:0.879;0.693, JPT:0.942;0.888, YRI:0.957;0.709 FUNCTIONAL_SNP rs7935829 chr11 59942815 Intron 6 3508 CEU:1.0;0.889 FUNCTIONAL_SNP rs556917 chr11 59858712 Intron 6 80595 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.887 FUNCTIONAL_SNP rs684961 chr11 59918837 Intergenic 6 20470 CEU:1.0;0.92, CHB:0.887;0.787, JPT:1.0;1.0, YRI:0.87;0.725 FUNCTIONAL_SNP rs2278867 chr11 59943109 Intron 6 3802 CEU:1.0;0.884 FUNCTIONAL_SNP rs11230183 chr11 59965725 Intergenic 6 26418 CEU:0.959;0.849 FUNCTIONAL_SNP rs1125357 chr11 59885493 Intergenic 6 53814 CEU:0.956;0.808 FUNCTIONAL_SNP rs540170 chr11 59880038 Intergenic 7 59269 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888 FUNCTIONAL_SNP rs595481 chr11 59914267 Intergenic 7 25040 CEU:1.0;0.916 FUNCTIONAL_SNP rs631853 chr11 59944898 Intron 7 5591 CEU:1.0;1.0, CHB:1.0;0.889, JPT:1.0;1.0, YRI:1.0;0.729 FUNCTIONAL_SNP rs476722 chr11 59913806 Intergenic 7 25501 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888 FUNCTIONAL_SNP rs2847667 chr11 59859609 Intron 7 79698 CEU:0.958;0.881 FUNCTIONAL_SNP rs1834550 chr11 59959843 Intergenic 7 20536 CEU:0.957;0.843 FUNCTIONAL_SNP rs555635 chr11 59877143 Intergenic 7 62164 CEU:1.0;0.923 FUNCTIONAL_SNP rs583296 chr11 59914726 Intergenic 7 24581 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888 FUNCTIONAL_SNP rs662196 chr11 59942757 Intron 7 3450 CEU:1.0;1.0, CHB:1.0;0.896, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs569046 chr11 59911161 Intergenic 7 28146 CEU:1.0;0.916, CHB:0.934;0.733, JPT:0.93;0.865, YRI:0.822;0.676 FUNCTIONAL_SNP rs521952 chr11 59870196 Intergenic 7 69111 CEU:1.0;0.923, CHB:0.883;0.701, JPT:0.942;0.888 FUNCTIONAL_SNP rs574704 chr11 59867913 Intergenic 7 71394 CEU:1.0;0.92, CHB:0.882;0.698, JPT:0.942;0.888 FUNCTIONAL_SNP rs525794 chr11 59903287 Intergenic 7 36020 CEU:1.0;0.925, CHB:0.883;0.701, JPT:0.942;0.888, YRI:1.0;0.746 FUNCTIONAL_SNP rs606588 chr11 59916905 Intergenic 7 22402 CEU:1.0;0.955, CHB:0.862;0.696, JPT:1.0;0.864 FUNCTIONAL_SNP rs516478 chr11 59870788 Intergenic 7 68519 CEU:1.0;1.0, CHB:0.852;0.637, JPT:0.936;0.876 FUNCTIONAL_SNP rs688030 chr11 59918162 Intergenic 7 21145 CEU:1.0;0.92, CHB:0.872;0.677, JPT:0.942;0.888, YRI:0.849;0.721 FUNCTIONAL_SNP rs636147 chr11 59957092 Intergenic 7 17785 CEU:1.0;0.962, CHB:1.0;0.846, JPT:1.0;1.0, YRI:0.923;0.821 FUNCTIONAL_SNP rs617916 chr11 59916749 Intergenic 7 22558 CEU:1.0;0.918, CHB:0.867;0.668, JPT:0.936;0.876, YRI:0.845;0.715 LEAD_SNP rs1562990 chr11 60023087 Intergenic 6 ASSOCIATION 21627779 Alzheimer's disease 10.3979400087 MS4A4E - MS4A4A FUNCTIONAL_SNP rs2081547 chr11 59989430 Intron 4 33657 CEU:0.958;0.881, CHB:1.0;1.0, JPT:1.0;0.895 FUNCTIONAL_SNP rs1582763 chr11 60021948 Intergenic 5a 1139 CEU:1.0;0.814, JPT:1.0;0.729 FUNCTIONAL_SNP rs655231 chr11 60013857 Intergenic 5a 9230 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.536 FUNCTIONAL_SNP rs718376 chr11 60002935 Intron 5b 20152 CEU:0.956;0.841, CHB:1.0;0.933, JPT:0.937;0.827 FUNCTIONAL_SNP rs1530914 chr11 60028940 Intergenic 6 5853 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs7107627 chr11 60041296 Intergenic 6 18209 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs7108663 chr11 60028142 Intergenic 6 5055 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs4939320 chr11 59981801 Intron 6 41286 CEU:0.953;0.869, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs6591559 chr11 60025565 Intergenic 6 2478 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.787 FUNCTIONAL_SNP rs4938931 chr11 60026613 Intergenic 6 3526 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.642 FUNCTIONAL_SNP rs1026254 chr11 60030457 Intergenic 6 7370 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.914 FUNCTIONAL_SNP rs1026255 chr11 60029949 Intergenic 6 6862 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs2015475 chr11 59998963 Intron 6 24124 CEU:0.913;0.833, CHB:1.0;1.0, JPT:1.0;0.895, YRI:0.897;0.666 FUNCTIONAL_SNP rs11601689 chr11 59996266 Intron 6 26821 CEU:0.957;0.879, CHB:1.0;1.0, JPT:1.0;0.895, YRI:1.0;0.746 FUNCTIONAL_SNP rs603648 chr11 60012673 Intergenic 7 10414 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.603 FUNCTIONAL_SNP rs611418 chr11 60011013 Intergenic 7 12074 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.787 FUNCTIONAL_SNP rs672399 chr11 60020112 Intergenic 7 2975 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4938933 chr11 60034429 Intergenic 7 11342 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs4492839 chr11 59986399 Intron 7 36688 CEU:0.958;0.881, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.727 FUNCTIONAL_SNP rs7929589 chr11 59975078 Intron 7 48009 CEU:0.958;0.881, CHB:1.0;1.0, JPT:1.0;0.895 FUNCTIONAL_SNP rs1426250 chr11 60001325 Intron 7 21762 CEU:0.913;0.833, CHB:1.0;0.933, JPT:1.0;0.895, YRI:0.897;0.666 FUNCTIONAL_SNP rs11230201 chr11 59996994 Intron 7 26093 CEU:0.958;0.881, CHB:1.0;1.0, JPT:1.0;0.895, YRI:1.0;0.746 LEAD_SNP rs4938933 chr11 60034429 Intergenic 7 ASSOCIATION 21460841 Alzheimer's disease (late onset) 11.096910013 MS4A4E - MS4A4A FUNCTIONAL_SNP rs2081547 chr11 59989430 Intron 4 44999 CEU:0.959;0.884, CHB:1.0;1.0, JPT:1.0;0.844 FUNCTIONAL_SNP rs1582763 chr11 60021948 Intergenic 5a 12481 CEU:1.0;0.818, JPT:1.0;0.774 FUNCTIONAL_SNP rs655231 chr11 60013857 Intergenic 5a 20572 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.944, YRI:0.935;0.557 FUNCTIONAL_SNP rs718376 chr11 60002935 Intron 5b 31494 CEU:0.957;0.844, CHB:1.0;0.933, JPT:0.933;0.771 FUNCTIONAL_SNP rs1530914 chr11 60028940 Intergenic 6 5489 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7107627 chr11 60041296 Intergenic 6 6867 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7108663 chr11 60028142 Intergenic 6 6287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs4939320 chr11 59981801 Intron 6 52628 CEU:0.955;0.872, CHB:1.0;1.0, JPT:1.0;0.835 FUNCTIONAL_SNP rs6591559 chr11 60025565 Intergenic 6 8864 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs4938931 chr11 60026613 Intergenic 6 7816 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.532 FUNCTIONAL_SNP rs1026254 chr11 60030457 Intergenic 6 3972 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1026255 chr11 60029949 Intergenic 6 4480 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2015475 chr11 59998963 Intron 6 35466 CEU:0.915;0.837, CHB:1.0;1.0, JPT:1.0;0.844 FUNCTIONAL_SNP rs11601689 chr11 59996266 Intron 6 38163 CEU:0.958;0.882, CHB:1.0;1.0, JPT:1.0;0.844 FUNCTIONAL_SNP rs1562990 chr11 60023087 Intergenic 6 11342 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs603648 chr11 60012673 Intergenic 7 21756 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.566 FUNCTIONAL_SNP rs611418 chr11 60011013 Intergenic 7 23416 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs672399 chr11 60020112 Intergenic 7 14317 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs4492839 chr11 59986399 Intron 7 48030 CEU:0.959;0.884, CHB:1.0;1.0, JPT:1.0;0.892 FUNCTIONAL_SNP rs7929589 chr11 59975078 Intron 7 59351 CEU:0.959;0.884, CHB:1.0;1.0, JPT:1.0;0.844 FUNCTIONAL_SNP rs1426250 chr11 60001325 Intron 7 33104 CEU:0.915;0.837, CHB:1.0;0.933, JPT:1.0;0.844 FUNCTIONAL_SNP rs11230201 chr11 59996994 Intron 7 37435 CEU:0.959;0.884, CHB:1.0;1.0, JPT:1.0;0.844 LEAD_SNP rs7930940 chr11 60525786 Intron 5a ASSOCIATION 20595579 Longevity 9.69897000434 MS4A15 LEAD_SNP rs17824933 chr11 60760612 Intron 4 ASSOCIATION 19525953 Multiple sclerosis 8.39794000867 CD6 LEAD_SNP rs4939490 chr11 60793651 Intergenic 3a ASSOCIATION 21244703 Multiple sclerosis 9.0 TRNAA45P - CD5 LEAD_SNP rs102275 chr11 61557803 Intron 7 ASSOCIATION 21102463 Crohn's disease 10.6989700043 C11orf10 ASSOCIATION 20694148 Metabolic syndrome 6.22184874962 C11orf10 FUNCTIONAL_SNP rs174535 chr11 61551356 Coding 4 6447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174568 chr11 61593816 Coding 5b 36013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4246215 chr11 61564299 Exon,non-coding 5a 6496 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174538 chr11 61560081 Exon,non-coding 4 2278 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174545 chr11 61569306 Exon,non-coding 7 11503 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174546 chr11 61569830 Exon,non-coding 5b 12027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174548 chr11 61571348 Exon,non-coding 5a 13545 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174549 chr11 61571382 Exon,non-coding 6 13579 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174550 chr11 61571478 Exon,non-coding 5a 13675 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1535 chr11 61597972 Intron 2b 40169 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174541 chr11 61565908 Intergenic 3a 8105 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174528 chr11 61543499 Intron 4 14304 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174574 chr11 61600342 Intron 4 42539 CEU:1.0;0.918, CHB:1.0;0.949, JPT:1.0;0.946 FUNCTIONAL_SNP rs174583 chr11 61609750 Intron 4 51947 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174556 chr11 61580635 Intron 5a 22832 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174577 chr11 61604814 Intron 5a 47011 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174578 chr11 61605499 Intron 5a 47696 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174536 chr11 61551927 Intron 5b 5876 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174537 chr11 61552680 Intron 5b 5123 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174576 chr11 61603510 Intron 5b 45707 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174601 chr11 61623140 Intron 6 65337 CEU:0.956;0.877, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs174547 chr11 61570783 Intron 6 12980 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174555 chr11 61579760 Intron 6 21957 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174566 chr11 61592362 Intron 6 34559 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs174546 chr11 61569830 Exon,non-coding 5b ASSOCIATION 20694148 Metabolic syndrome 6.22184874962 FADS1 ASSOCIATION 19060910 LDL cholesterol 7.0 FADS1 FUNCTIONAL_SNP rs174568 chr11 61593816 Coding 5b 23986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4246215 chr11 61564299 Exon,non-coding 5a 5531 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174545 chr11 61569306 Exon,non-coding 7 524 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174549 chr11 61571382 Exon,non-coding 6 1552 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174550 chr11 61571478 Exon,non-coding 5a 1648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174541 chr11 61565908 Intergenic 3a 3922 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174556 chr11 61580635 Intron 5a 10805 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174536 chr11 61551927 Intron 5b 17903 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174537 chr11 61552680 Intron 5b 17150 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174547 chr11 61570783 Intron 6 953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174555 chr11 61579760 Intron 6 9930 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs174547 chr11 61570783 Intron 6 ASSOCIATION 20639392 Resting heart rate 8.69897000434 FADS1 ASSOCIATION 20037589 Serum metabolites 178.15490196 FADS1 ASSOCIATION 19060906 HDL cholesterol 11.6989700043 FADS1 ASSOCIATION 19060906 Triglycerides 13.6989700043 FADS1 FUNCTIONAL_SNP rs174535 chr11 61551356 Coding 4 19427 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174568 chr11 61593816 Coding 5b 23033 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4246215 chr11 61564299 Exon,non-coding 5a 6484 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174538 chr11 61560081 Exon,non-coding 4 10702 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174545 chr11 61569306 Exon,non-coding 7 1477 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174546 chr11 61569830 Exon,non-coding 5b 953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174548 chr11 61571348 Exon,non-coding 5a 565 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174549 chr11 61571382 Exon,non-coding 6 599 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174550 chr11 61571478 Exon,non-coding 5a 695 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1535 chr11 61597972 Intron 2b 27189 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174541 chr11 61565908 Intergenic 3a 4875 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174528 chr11 61543499 Intron 4 27284 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174574 chr11 61600342 Intron 4 29559 CEU:1.0;0.92, CHB:1.0;0.949, JPT:1.0;0.946 FUNCTIONAL_SNP rs174583 chr11 61609750 Intron 4 38967 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174577 chr11 61604814 Intron 5a 34031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174556 chr11 61580635 Intron 5a 9852 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174578 chr11 61605499 Intron 5a 34716 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174576 chr11 61603510 Intron 5b 32727 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174536 chr11 61551927 Intron 5b 18856 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174537 chr11 61552680 Intron 5b 18103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174601 chr11 61623140 Intron 6 52357 CEU:0.957;0.879, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs174555 chr11 61579760 Intron 6 8977 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174566 chr11 61592362 Intron 6 21579 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs102275 chr11 61557803 Intron 7 12980 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs174548 chr11 61571348 Exon,non-coding 5a ASSOCIATION 20864672 HDL cholesterol 12.0 FADS1 ASSOCIATION 20864672 Triglycerides 13.3010299957 FADS1 ASSOCIATION 19043545 Serum metabolites 7.30102999566 FADS1 FUNCTIONAL_SNP rs174535 chr11 61551356 Coding 4 19992 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.653 FUNCTIONAL_SNP rs174568 chr11 61593816 Coding 5b 22468 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174546 chr11 61569830 Exon,non-coding 5b 1518 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174549 chr11 61571382 Exon,non-coding 6 34 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174550 chr11 61571478 Exon,non-coding 5a 130 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1535 chr11 61597972 Intron 2b 26624 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174583 chr11 61609750 Intron 4 38402 CEU:1.0;0.808, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174556 chr11 61580635 Intron 5a 9287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174577 chr11 61604814 Intron 5a 33466 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174578 chr11 61605499 Intron 5a 34151 CEU:1.0;0.802, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174536 chr11 61551927 Intron 5b 19421 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174537 chr11 61552680 Intron 5b 18668 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174576 chr11 61603510 Intron 5b 32162 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174547 chr11 61570783 Intron 6 565 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174555 chr11 61579760 Intron 6 8412 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174566 chr11 61592362 Intron 6 21014 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.644 FUNCTIONAL_SNP rs102275 chr11 61557803 Intron 7 13545 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs174550 chr11 61571478 Exon,non-coding 5a ASSOCIATION 20081858 Fasting glucose-related traits 14.6989700043 FADS1 ASSOCIATION 20081858 Fasting glucose-related traits 12.3010299957 FADS1 FUNCTIONAL_SNP rs174535 chr11 61551356 Coding 4 20122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174568 chr11 61593816 Coding 5b 22338 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4246215 chr11 61564299 Exon,non-coding 5a 7179 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174538 chr11 61560081 Exon,non-coding 4 11397 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174545 chr11 61569306 Exon,non-coding 7 2172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174546 chr11 61569830 Exon,non-coding 5b 1648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174548 chr11 61571348 Exon,non-coding 5a 130 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174549 chr11 61571382 Exon,non-coding 6 96 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1535 chr11 61597972 Intron 2b 26494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174541 chr11 61565908 Intergenic 3a 5570 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174528 chr11 61543499 Intron 4 27979 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174574 chr11 61600342 Intron 4 28864 CEU:1.0;0.92, CHB:1.0;0.949, JPT:1.0;0.946 FUNCTIONAL_SNP rs174583 chr11 61609750 Intron 4 38272 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174556 chr11 61580635 Intron 5a 9157 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174577 chr11 61604814 Intron 5a 33336 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174578 chr11 61605499 Intron 5a 34021 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.902 FUNCTIONAL_SNP rs174536 chr11 61551927 Intron 5b 19551 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174537 chr11 61552680 Intron 5b 18798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174576 chr11 61603510 Intron 5b 32032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174601 chr11 61623140 Intron 6 51662 CEU:0.959;0.852, CHB:1.0;1.0, JPT:1.0;0.778 FUNCTIONAL_SNP rs174547 chr11 61570783 Intron 6 695 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174555 chr11 61579760 Intron 6 8282 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs174566 chr11 61592362 Intron 6 20884 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs102275 chr11 61557803 Intron 7 13675 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs174570 chr11 61597212 Intron 2b ASSOCIATION 19060911 Cholesterol, total 9.69897000434 FADS2 ASSOCIATION 19060911 HDL cholesterol 5.39794000867 FADS2 ASSOCIATION 19060911 LDL cholesterol 12.3979400087 FADS2 LEAD_SNP rs1535 chr11 61597972 Intron 2b ASSOCIATION 20694148 Metabolic syndrome 6.39794000867 FADS2 ASSOCIATION 20339536 Response to statin therapy 5.15490195999 FADS2 FUNCTIONAL_SNP rs174535 chr11 61551356 Coding 4 46616 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174568 chr11 61593816 Coding 5b 4156 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4246215 chr11 61564299 Exon,non-coding 5a 33673 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174538 chr11 61560081 Exon,non-coding 4 37891 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174545 chr11 61569306 Exon,non-coding 7 28666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174546 chr11 61569830 Exon,non-coding 5b 28142 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174548 chr11 61571348 Exon,non-coding 5a 26624 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174549 chr11 61571382 Exon,non-coding 6 26590 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174550 chr11 61571478 Exon,non-coding 5a 26494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174541 chr11 61565908 Intergenic 3a 32064 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174528 chr11 61543499 Intron 4 54473 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174574 chr11 61600342 Intron 4 2370 CEU:1.0;0.92, CHB:1.0;0.949, JPT:1.0;0.946 FUNCTIONAL_SNP rs174583 chr11 61609750 Intron 4 11778 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174577 chr11 61604814 Intron 5a 6842 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174556 chr11 61580635 Intron 5a 17337 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174578 chr11 61605499 Intron 5a 7527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174576 chr11 61603510 Intron 5b 5538 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947 FUNCTIONAL_SNP rs174536 chr11 61551927 Intron 5b 46045 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174537 chr11 61552680 Intron 5b 45292 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174601 chr11 61623140 Intron 6 25168 CEU:0.957;0.879, CHB:1.0;1.0, JPT:1.0;0.81 FUNCTIONAL_SNP rs174547 chr11 61570783 Intron 6 27189 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174555 chr11 61579760 Intron 6 18212 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs174566 chr11 61592362 Intron 6 5610 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.597 FUNCTIONAL_SNP rs102275 chr11 61557803 Intron 7 40169 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs174583 chr11 61609750 Intron 4 ASSOCIATION 20339536 Response to statin therapy 5.52287874528 FADS2 FUNCTIONAL_SNP rs174535 chr11 61551356 Coding 4 58394 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174568 chr11 61593816 Coding 5b 15934 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs4246215 chr11 61564299 Exon,non-coding 5a 45451 CEU:1.0;0.884, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174538 chr11 61560081 Exon,non-coding 4 49669 CEU:1.0;0.88, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174545 chr11 61569306 Exon,non-coding 7 40444 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.729 FUNCTIONAL_SNP rs174546 chr11 61569830 Exon,non-coding 5b 39920 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174548 chr11 61571348 Exon,non-coding 5a 38402 CEU:1.0;0.808, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174549 chr11 61571382 Exon,non-coding 6 38368 CEU:1.0;0.808, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174550 chr11 61571478 Exon,non-coding 5a 38272 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs1535 chr11 61597972 Intron 2b 11778 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174541 chr11 61565908 Intergenic 3a 43842 CEU:1.0;0.882, CHB:1.0;0.948, JPT:1.0;0.729 FUNCTIONAL_SNP rs174528 chr11 61543499 Intron 4 66251 CEU:1.0;0.884, CHB:1.0;0.949, JPT:1.0;0.722 FUNCTIONAL_SNP rs174574 chr11 61600342 Intron 4 9408 CEU:1.0;0.92, CHB:0.948;0.898, JPT:0.935;0.668 FUNCTIONAL_SNP rs174577 chr11 61604814 Intron 5a 4936 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.77, YRI:1.0;0.714 FUNCTIONAL_SNP rs174556 chr11 61580635 Intron 5a 29115 CEU:1.0;0.808, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174578 chr11 61605499 Intron 5a 4251 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.77, YRI:1.0;0.704 FUNCTIONAL_SNP rs174576 chr11 61603510 Intron 5b 6240 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.77, YRI:1.0;0.916 FUNCTIONAL_SNP rs174536 chr11 61551927 Intron 5b 57823 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174537 chr11 61552680 Intron 5b 57070 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174601 chr11 61623140 Intron 6 13390 CEU:0.957;0.879, CHB:1.0;0.95, JPT:0.888;0.711 FUNCTIONAL_SNP rs174547 chr11 61570783 Intron 6 38967 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174555 chr11 61579760 Intron 6 29990 CEU:1.0;0.808, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs174566 chr11 61592362 Intron 6 17388 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 FUNCTIONAL_SNP rs102275 chr11 61557803 Intron 7 51947 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.729 LEAD_SNP rs1000778 chr11 61655305 Intron 5b ASSOCIATION 19798445 Sphingolipid levels 12.15490196 FADS3 FUNCTIONAL_SNP rs174464 chr11 61657926 Intron 4 2621 CEU:1.0;0.952, CHB:1.0;0.846, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs174454 chr11 61650747 Intron 4 4558 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.95 FUNCTIONAL_SNP rs174634 chr11 61647387 Intron 5b 7918 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.95 FUNCTIONAL_SNP rs174456 chr11 61656182 Intron 5b 877 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs174460 chr11 61657110 Intron 5b 1805 CEU:1.0;0.826, CHB:1.0;0.893, JPT:1.0;1.0, YRI:1.0;0.908 FUNCTIONAL_SNP rs1295988 chr11 61656658 Intron 6 1353 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 LEAD_SNP rs2244621 chr11 64026219 Intron 5b ASSOCIATION 20595579 Longevity 9.30102999566 PLCB3 FUNCTIONAL_SNP rs953778 chr11 64066999 Coding 5b 40780 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs10792429 chr11 64106727 Intergenic 3a 80508 CEU:1.0;1.0, CHB:1.0;0.657, JPT:0.944;0.733 FUNCTIONAL_SNP rs11231745 chr11 64063659 Intron 5b 37440 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs34499953 chr11 64060976 Intron 5b 34757 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4930702 chr11 64089874 Intergenic 6 63655 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.777 LEAD_SNP rs694739 chr11 64097233 Intergenic 5b ASSOCIATION 21102463 Crohn's disease 9.22184874962 PRDX5 - CCDC88B ASSOCIATION 20596022 Alopecia areata 6.39794000867 PRDX5 - CCDC88B FUNCTIONAL_SNP rs647152 chr11 64109118 Coding 5b 11885 CEU:1.0;0.805, JPT:1.0;0.555 FUNCTIONAL_SNP rs663743 chr11 64107735 Exon,non-coding 4 10502 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs2510066 chr11 64052447 Exon,non-coding 4 44786 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;0.555 FUNCTIONAL_SNP rs574087 chr11 64102948 Intergenic 4 5715 CEU:0.957;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs479777 chr11 64107477 Intergenic 4 10244 CEU:1.0;0.842, CHB:1.0;0.811, JPT:1.0;0.863, YRI:1.0;0.555 FUNCTIONAL_SNP rs499425 chr11 64105929 Intergenic 5b 8696 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.654 LEAD_SNP rs538147 chr11 64129722 Intron 4 ASSOCIATION 21399635 Primary biliary cirrhosis 9.69897000434 RPS6KA4 FUNCTIONAL_SNP rs475032 chr11 64140737 Intergenic 4 11015 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0 FUNCTIONAL_SNP rs10897487 chr11 64140704 Intergenic 4 10982 CEU:1.0;1.0, CHB:1.0;0.927, JPT:1.0;1.0, YRI:1.0;0.791 FUNCTIONAL_SNP rs10897488 chr11 64140806 Intergenic 4 11084 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs508168 chr11 64135435 Intron 5b 5713 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs516124 chr11 64128423 Intron 5b 1299 CEU:0.956;0.876, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11606081 chr11 64137875 Intron 5b 8153 CEU:1.0;1.0, CHB:1.0;0.927, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs645078 chr11 64135298 Intron 5b 5576 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17300741 chr11 64331462 Intron 5b ASSOCIATION 19503597 Serum uric acid 13.15490196 SLC22A11 FUNCTIONAL_SNP rs3759053 chr11 64323080 Intergenic 2b 8382 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.891;0.507 FUNCTIONAL_SNP rs2078267 chr11 64334114 Intron 4 2652 CEU:1.0;0.961 FUNCTIONAL_SNP rs7124676 chr11 64313291 Intergenic 4 18171 CEU:1.0;0.924 FUNCTIONAL_SNP rs7940321 chr11 64324120 Intron 4 7342 CEU:1.0;0.955, CHB:1.0;0.846, JPT:1.0;1.0, YRI:0.944;0.545 FUNCTIONAL_SNP rs17372915 chr11 64331568 Intron 5b 106 CEU:1.0;1.0 FUNCTIONAL_SNP rs3782099 chr11 64327710 Intron 5b 3752 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7943154 chr11 64327844 Intron 5b 3618 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;0.74, YRI:1.0;0.532 FUNCTIONAL_SNP rs4930426 chr11 64315914 Intergenic 7 15548 CEU:1.0;0.924 LEAD_SNP rs2078267 chr11 64334114 Intron 4 ASSOCIATION 20884846 Serum urate 6.0 SLC22A11 ASSOCIATION 20884846 Serum urate 25.6989700043 SLC22A11 FUNCTIONAL_SNP rs3759053 chr11 64323080 Intergenic 2b 11034 CEU:0.959;0.885 FUNCTIONAL_SNP rs7940321 chr11 64324120 Intron 4 9994 CEU:0.953;0.909 FUNCTIONAL_SNP rs7124676 chr11 64313291 Intergenic 4 20823 CEU:0.959;0.885, CHB:1.0;1.0 FUNCTIONAL_SNP rs17300741 chr11 64331462 Intron 5b 2652 CEU:1.0;0.961 FUNCTIONAL_SNP rs17372915 chr11 64331568 Intron 5b 2546 CEU:1.0;0.954, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7943154 chr11 64327844 Intron 5b 6270 CEU:0.959;0.883 FUNCTIONAL_SNP rs3782099 chr11 64327710 Intron 5b 6404 CEU:0.959;0.883 FUNCTIONAL_SNP rs4930426 chr11 64315914 Intergenic 7 18200 CEU:0.959;0.885, CHB:1.0;1.0 LEAD_SNP rs505802 chr11 64357072 Intergenic 5b ASSOCIATION 19503597 Serum uric acid 8.69897000434 SLC22A12 FUNCTIONAL_SNP rs526338 chr11 64418900 Coding 4 61828 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs11231825 chr11 64360274 Coding 5b 3202 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs3825016 chr11 64359286 Coding 5b 2214 CEU:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs9734313 chr11 64358311 Exon,non-coding 5b 1239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs3825018 chr11 64358809 Exon,non-coding 5b 1737 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.506 FUNCTIONAL_SNP rs524023 chr11 64358265 Exon,non-coding 5b 1193 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs519090 chr11 64456240 Intron 2b 99168 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs2277311 chr11 64387932 Intron 2b 30860 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs11606370 chr11 64378452 Intron 2b 21380 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs492175 chr11 64433078 Intron 4 76006 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.552 FUNCTIONAL_SNP rs475642 chr11 64424691 Intron 4 67619 CEU:1.0;0.951, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs7105665 chr11 64396568 Intron 5b 39496 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs7932437 chr11 64373504 Intergenic 5b 16432 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.552 FUNCTIONAL_SNP rs500531 chr11 64487019 Intron 5b 129947 CEU:0.945;0.847, CHB:0.935;0.821, JPT:1.0;0.842 FUNCTIONAL_SNP rs2360873 chr11 64391157 Intron 5b 34085 CEU:1.0;0.951, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs10897518 chr11 64360705 Intron 5b 3633 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs555456 chr11 64418259 Intron 5b 61187 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs544838 chr11 64429059 Intron 5b 71987 CEU:1.0;0.952, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.552 FUNCTIONAL_SNP rs893006 chr11 64365796 Intron 5b 8724 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs528211 chr11 64351721 Intergenic 5b 5351 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs506338 chr11 64440920 Intron 5b 83848 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.552 FUNCTIONAL_SNP rs10792443 chr11 64395252 Intron 5b 38180 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs11231845 chr11 64407419 Intron 5b 50347 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.552 FUNCTIONAL_SNP rs2360872 chr11 64353405 Intergenic 5b 3667 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs538737 chr11 64355772 Intergenic 5b 1300 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs504915 chr11 64464085 Intron 5b 107013 CEU:1.0;0.953, CHB:1.0;0.941, JPT:1.0;1.0 FUNCTIONAL_SNP rs2666559 chr11 64439227 Intron 5b 82155 CEU:1.0;0.953, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs4930556 chr11 64377726 Intron 5b 20654 CEU:1.0;0.952, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;0.535 LEAD_SNP rs17146964 chr11 65249145 Intergenic 4 ASSOCIATION 20548946 Vertical cup-disc ratio 8.39794000867 NEAT1 - MALAT1 FUNCTIONAL_SNP rs10896009 chr11 65246054 Intergenic 2b 3091 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1152619 chr11 65255589 Intergenic 4 6444 CEU:1.0;0.86 FUNCTIONAL_SNP rs11227199 chr11 65238121 Intergenic 5b 11024 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs12360896 chr11 65238306 Intergenic 7 10839 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3782089 chr11 65336819 Intergenic 5b ASSOCIATION 20881960 Height 12.3979400087 SSSCA1 LEAD_SNP rs6591182 chr11 65349756 Coding 5b ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 6.04575749056 EHBP1L1 FUNCTIONAL_SNP rs11227229 chr11 65354150 Intron 5b 4394 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.827 LEAD_SNP rs4014195 chr11 65506822 Intergenic 6 ASSOCIATION 20383146 Chronic kidney disease 7.0 KRT8P26 - DKFZp761E198 FUNCTIONAL_SNP rs6591188 chr11 65467953 Intergenic 3a 38869 CEU:1.0;0.875, CHB:0.936;0.877, JPT:1.0;0.699 FUNCTIONAL_SNP rs10896032 chr11 65459419 Intergenic 5a 47403 CEU:1.0;0.874, CHB:0.936;0.877, JPT:1.0;0.699 FUNCTIONAL_SNP rs948494 chr11 65552118 Intergenic 5b 45296 CEU:1.0;0.956, CHB:1.0;0.938, JPT:1.0;1.0 FUNCTIONAL_SNP rs4645933 chr11 65485120 Intron 5b 21702 CEU:1.0;0.872, CHB:0.936;0.877, JPT:1.0;0.699 FUNCTIONAL_SNP rs11227299 chr11 65549570 Intergenic 5b 42748 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4645927 chr11 65482827 Intron 5b 23995 CEU:1.0;0.875, CHB:0.935;0.821, JPT:1.0;0.699 FUNCTIONAL_SNP rs7934036 chr11 65451020 Intergenic 5b 55802 CEU:1.0;0.875, CHB:0.936;0.877, JPT:1.0;0.699 FUNCTIONAL_SNP rs12289836 chr11 65436888 Intergenic 6 69934 CEU:1.0;0.875, CHB:0.936;0.877, JPT:1.0;0.699 FUNCTIONAL_SNP rs1074155 chr11 65458197 Intergenic 6 48625 CEU:1.0;0.875, CHB:0.936;0.877, JPT:1.0;0.699 FUNCTIONAL_SNP rs7947604 chr11 65442059 Intergenic 7 64763 CEU:1.0;0.875 FUNCTIONAL_SNP rs11227281 chr11 65496558 Intergenic 7 10264 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9666878 chr11 65475816 Intergenic 7 31006 CEU:1.0;0.875, CHB:0.936;0.877, JPT:1.0;0.699 FUNCTIONAL_SNP rs7115734 chr11 65458964 Intergenic 7 47858 CEU:1.0;0.874, CHB:0.936;0.877, JPT:1.0;0.672 FUNCTIONAL_SNP rs11227279 chr11 65495211 Intergenic 7 11611 CEU:0.95;0.823, CHB:1.0;0.867, JPT:1.0;1.0 FUNCTIONAL_SNP rs1074156 chr11 65458169 Intergenic 7 48653 CEU:1.0;0.875, CHB:0.936;0.877, JPT:1.0;0.699 LEAD_SNP rs2242663 chr11 66335308 Intron 5b ASSOCIATION 19416921 Bipolar disorder 6.0 CTSF LEAD_SNP rs599083 chr11 68192346 Intron 5b ASSOCIATION 19801982 Bone mineral density (spine) 7.30102999566 LRP5 FUNCTIONAL_SNP rs556442 chr11 68192690 Coding 5b 344 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;0.905 FUNCTIONAL_SNP rs608343 chr11 68196830 Intron 5b 4484 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;0.905, YRI:1.0;0.645 FUNCTIONAL_SNP rs607887 chr11 68196961 Intron 5b 4615 CEU:1.0;0.949, CHB:1.0;1.0, JPT:0.894;0.799 FUNCTIONAL_SNP rs901823 chr11 68205578 Intron 5b 13232 CEU:1.0;0.949, CHB:1.0;0.928, JPT:0.947;0.854, YRI:0.878;0.666 FUNCTIONAL_SNP rs531163 chr11 68194496 Intron 5b 2150 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;0.905, YRI:0.843;0.66 FUNCTIONAL_SNP rs630225 chr11 68194611 Intron 5b 2265 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;0.905, YRI:1.0;0.771 FUNCTIONAL_SNP rs638076 chr11 68202580 Intron 5b 10234 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;0.905, YRI:0.87;0.586 FUNCTIONAL_SNP rs554734 chr11 68192518 Intron 5b 172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs314750 chr11 68182028 Intron 5b 10318 CEU:1.0;0.902, CHB:1.0;0.928, JPT:1.0;0.857 LEAD_SNP rs3736228 chr11 68201295 Coding 5b ASSOCIATION 18455228 Bone mineral density 11.2218487496 LRP5 LEAD_SNP rs3750965 chr11 68840160 Coding 4 ASSOCIATION 20585627 Hair color 6.52287874528 TPCN2 FUNCTIONAL_SNP rs731974 chr11 68847156 Exon,non-coding 5b 6996 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.674 FUNCTIONAL_SNP rs4930265 chr11 68855954 Exon,non-coding 5b 15794 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2253658 chr11 68856804 Exon,non-coding 2a 16644 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3168115 chr11 68858090 Exon,non-coding 5b 17930 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.522 FUNCTIONAL_SNP rs12285865 chr11 68821862 Intron 2b 18298 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4930644 chr11 68819097 Intron 2b 21063 CEU:1.0;0.884, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs11604251 chr11 68820429 Intron 4 19731 CEU:1.0;0.854, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs12285715 chr11 68821648 Intron 5b 18512 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs921670 chr11 68871639 Intergenic 5b 31479 CEU:0.948;0.856, CHB:0.842;0.58, JPT:1.0;0.867, YRI:0.879;0.571 FUNCTIONAL_SNP rs11228490 chr11 68860872 Intergenic 5b 20712 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs896978 chr11 68828929 Intron 5b 11231 CEU:1.0;0.902, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs4930643 chr11 68818936 Intron 5b 21224 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7107680 chr11 68859894 Intergenic 5b 19734 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.893 FUNCTIONAL_SNP rs12280942 chr11 68859683 Intergenic 5b 19523 CEU:0.949;0.901 LEAD_SNP rs35264875 chr11 68846399 Coding 5b ASSOCIATION 18488028 Blond vs. brown hair color 29.3979400087 TPCN2 LEAD_SNP rs11228565 chr11 68978580 Intergenic 5b ASSOCIATION 19767754 Prostate cancer 11.15490196 TPCN2 - MYEOV FUNCTIONAL_SNP rs12281017 chr11 68977501 Intergenic 4 1079 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.741, YRI:1.0;1.0 FUNCTIONAL_SNP rs7117034 chr11 68975142 Intergenic 4 3438 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7931342 chr11 68994497 Intergenic 7 ASSOCIATION 18264097 Prostate cancer 11.6989700043 TPCN2 - MYEOV FUNCTIONAL_SNP rs4644650 chr11 68998118 Intergenic 5a 3621 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4451736 chr11 68982703 Intergenic 5b 11794 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7109672 chr11 68991110 Intergenic 6 3387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7122190 chr11 68993788 Intergenic 6 709 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12362678 chr11 68996170 Intergenic 7 1673 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10896449 chr11 68994667 Intergenic 7 ASSOCIATION 18264096 Prostate cancer 8.69897000434 TPCN2 - MYEOV FUNCTIONAL_SNP rs7929962 chr11 68985583 Intergenic 4 9084 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6591374 chr11 68993832 Intergenic 6 835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9787877 chr11 68996509 Intergenic 7 1842 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7130881 chr11 68995958 Intergenic 7 ASSOCIATION 21743057 Prostate cancer 8.04575749056 TPCN2 - MYEOV ASSOCIATION 19767753 Prostate cancer 12.096910013 TPCN2 - MYEOV FUNCTIONAL_SNP rs11228580 chr11 69002342 Intergenic 4 6384 CEU:1.0;0.939, YRI:1.0;1.0 FUNCTIONAL_SNP rs12795301 chr11 68992285 Intergenic 7 3673 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12417087 chr11 69003979 Intergenic 7 8021 CEU:1.0;0.936, YRI:1.0;0.937 LEAD_SNP rs7105934 chr11 69239741 Intergenic 3a ASSOCIATION 21131975 Renal cell carcinoma 13.096910013 IFITM9P - CCND1 FUNCTIONAL_SNP rs11263429 chr11 69244027 Exon,non-coding 5b 4286 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12286718 chr11 69243114 Exon,non-coding 5b 3373 CEU:1.0;0.824, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs4576847 chr11 69250375 Intergenic 3a 10634 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10796817 chr11 69241032 Intron 4 1291 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.689 FUNCTIONAL_SNP rs17136556 chr11 69251852 Intergenic 4 12111 CEU:1.0;0.848 FUNCTIONAL_SNP rs11263442 chr11 69252200 Intergenic 4 12459 CEU:1.0;1.0 FUNCTIONAL_SNP rs11263441 chr11 69252000 Intergenic 4 12259 CEU:1.0;1.0 FUNCTIONAL_SNP rs10908258 chr11 69237539 Intergenic 5b 2202 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7943577 chr11 69231876 Intergenic 5b 7865 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.554 FUNCTIONAL_SNP rs7939454 chr11 69234390 Intergenic 5b 5351 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.554 LEAD_SNP rs614367 chr11 69328764 Intergenic 5b ASSOCIATION 20453838 Breast cancer 14.5228787453 IFITM9P - CCND1 FUNCTIONAL_SNP rs657686 chr11 69332670 Intergenic 2b 3906 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.913 FUNCTIONAL_SNP rs17136641 chr11 69328512 Intergenic 5b 252 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs554219 chr11 69331642 Intergenic 5b 2878 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs661204 chr11 69330983 Intergenic 7 2219 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.919 LEAD_SNP rs12785878 chr11 71167449 Intron 7 ASSOCIATION 20541252 Vitamin D insufficiency 26.6989700043 NADSYN1 FUNCTIONAL_SNP rs1044482 chr11 71155171 Coding 7 12278 CEU:1.0;0.946, CHB:0.948;0.856, JPT:1.0;0.937 FUNCTIONAL_SNP rs2276360 chr11 71169547 Coding 7 2098 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0 FUNCTIONAL_SNP rs12797951 chr11 71143266 Intergenic 2b 24183 CEU:1.0;0.95, CHB:1.0;0.955, JPT:1.0;0.892, YRI:0.884;0.634 FUNCTIONAL_SNP rs7928249 chr11 71161063 Intron 2b 6386 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0 FUNCTIONAL_SNP rs3750997 chr11 71158841 Intron 4 8608 CEU:1.0;0.95, CHB:0.893;0.694, JPT:1.0;0.618 FUNCTIONAL_SNP rs12791871 chr11 71164544 Intron 4 2905 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7935125 chr11 71184190 Intron 4 16741 CEU:1.0;1.0, CHB:0.945;0.893, JPT:1.0;1.0, YRI:0.921;0.689 FUNCTIONAL_SNP rs12790558 chr11 71170905 Intron 5a 3456 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs12808368 chr11 71170817 Intron 5a 3368 CEU:1.0;1.0, CHB:0.952;0.905, JPT:1.0;1.0, YRI:1.0;0.895 FUNCTIONAL_SNP rs11603330 chr11 71153459 Intron 5a 13990 CEU:1.0;0.95, CHB:0.951;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs3794060 chr11 71187679 Intron 5b 20230 CEU:1.0;1.0, CHB:0.953;0.908, JPT:1.0;1.0, YRI:1.0;0.74 FUNCTIONAL_SNP rs12800438 chr11 71171003 Intron 5b 3554 CEU:1.0;1.0, CHB:0.953;0.908, JPT:1.0;1.0 FUNCTIONAL_SNP rs4944062 chr11 71187294 Intron 5b 19845 CEU:1.0;1.0, CHB:0.948;0.898, JPT:1.0;1.0 FUNCTIONAL_SNP rs4944959 chr11 71168234 Intron 5b 785 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0 FUNCTIONAL_SNP rs7938885 chr11 71170043 Intron 5b 2594 CEU:1.0;1.0, CHB:0.953;0.908, JPT:1.0;1.0 FUNCTIONAL_SNP rs7944926 chr11 71165625 Intron 5b 1824 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4944958 chr11 71168073 Intron 5b 624 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.884 FUNCTIONAL_SNP rs2282620 chr11 71183477 Intron 5b 16028 CEU:1.0;1.0, CHB:0.945;0.742, JPT:1.0;0.618 FUNCTIONAL_SNP rs2282621 chr11 71183474 Intron 5b 16025 CEU:1.0;1.0, CHB:0.945;0.742, JPT:1.0;0.618 FUNCTIONAL_SNP rs11606033 chr11 71154204 Intron 6 13245 CEU:1.0;0.95, CHB:0.951;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs12419279 chr11 71139061 Intergenic 6 28388 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.821, YRI:1.0;0.525 FUNCTIONAL_SNP rs2040323 chr11 71172783 Intron 7 5334 CEU:1.0;1.0, CHB:0.952;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs12419334 chr11 71139472 Intergenic 7 27977 CEU:1.0;0.947, CHB:1.0;0.952, JPT:1.0;0.892, YRI:1.0;0.543 FUNCTIONAL_SNP rs2276362 chr11 71174452 Intron 7 7003 CEU:1.0;1.0, CHB:0.953;0.908, JPT:1.0;1.0 FUNCTIONAL_SNP rs12422045 chr11 71154820 Intron 7 12629 CEU:1.0;0.95, CHB:0.951;0.863, JPT:1.0;1.0 FUNCTIONAL_SNP rs4423214 chr11 71173254 Intron 7 5805 CEU:1.0;1.0, CHB:0.948;0.898, JPT:1.0;1.0 FUNCTIONAL_SNP rs4944957 chr11 71168035 Intron 7 586 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs11600569 chr11 71173747 Intron 7 6298 CEU:1.0;1.0, CHB:0.949;0.901, JPT:1.0;1.0, YRI:1.0;0.79 FUNCTIONAL_SNP rs4945008 chr11 71221248 Intergenic 7 53799 CEU:1.0;0.95, CHB:0.952;0.906, JPT:1.0;1.0, YRI:1.0;0.74 FUNCTIONAL_SNP rs2852853 chr11 71150217 Intron 7 17232 CEU:1.0;0.942, CHB:1.0;0.909, JPT:1.0;0.892, YRI:0.882;0.631 LEAD_SNP rs12418204 chr11 72250123 Intergenic 5b ASSOCIATION 20395239 Optic disc size (cup) 5.30102999566 ART2P - PDE2A LEAD_SNP rs1552224 chr11 72433098 Exon,non-coding 2b ASSOCIATION 20581827 Type 2 diabetes 22.0 ARAP1 FUNCTIONAL_SNP rs11603334 chr11 72432985 Exon,non-coding 2b 113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7129793 chr11 72455885 Intron 5b 22787 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs634552 chr11 75282052 Intron 5b ASSOCIATION 20881960 Height 12.3979400087 SERPINH1 FUNCTIONAL_SNP rs606452 chr11 75276178 Intron 5b 5874 CEU:1.0;1.0, CHB:1.0;0.714, JPT:1.0;0.952, YRI:0.954;0.87 LEAD_SNP rs4944092 chr11 75909619 Intron 5b ASSOCIATION 20062060 PR interval 7.52287874528 WNT11 FUNCTIONAL_SNP rs608747 chr11 75916477 Intron 4 6858 CEU:0.948;0.854, CHB:0.839;0.654, JPT:1.0;0.846, YRI:0.845;0.663 FUNCTIONAL_SNP rs94111 chr11 75915139 Intron 5b 5520 CEU:0.951;0.862, CHB:0.918;0.728, JPT:1.0;1.0, YRI:0.852;0.726 LEAD_SNP rs2155219 chr11 76299194 Intergenic 5b ASSOCIATION 21297633 Ulcerative colitis 15.3010299957 C11orf30 - LRRC32 LEAD_SNP rs7927894 chr11 76301316 Intergenic 5b ASSOCIATION 19349984 Atopic dermatitis 9.09691001301 C11orf30 - LRRC32 ASSOCIATION 18587394 Crohn's disease 9.0 C11orf30 - LRRC32 LEAD_SNP rs3781684 chr11 76823484 Intron 5b ASSOCIATION 19734545 Cognitive performance 5.15490195999 CAPN5 LEAD_SNP rs2373115 chr11 78091150 Intron 7 ASSOCIATION 17553421 Alzheimer's disease (late onset) 10.0 GAB2 FUNCTIONAL_SNP rs11237471 chr11 78082604 Intron 5b 8546 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7112234 chr11 78102470 Intron 6 11320 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs10899489 chr11 78095373 Intron 7 4223 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10899490 chr11 78105879 Intron 7 14729 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.909, YRI:1.0;1.0 FUNCTIONAL_SNP rs10793309 chr11 78093799 Intron 7 2649 CEU:1.0;0.907, CHB:1.0;0.824, JPT:1.0;0.8, YRI:0.944;0.805 FUNCTIONAL_SNP rs11237477 chr11 78095069 Intron 7 3919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 LEAD_SNP rs10899489 chr11 78095373 Intron 7 ASSOCIATION 21102462 Menarche (age at onset) 8.09691001301 GAB2 FUNCTIONAL_SNP rs1385600 chr11 77936166 Coding 5a 159207 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.893;0.507 FUNCTIONAL_SNP rs2450122 chr11 77930345 Coding 7 165028 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2510044 chr11 77909014 Coding 4 186359 CEU:1.0;0.828, CHB:0.885;0.674, JPT:1.0;1.0 FUNCTIONAL_SNP rs2510045 chr11 77920563 Coding 5b 174810 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2248407 chr11 77937800 Coding 6 157573 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs1485483 chr11 77930138 Exon,non-coding 7 165235 CEU:1.0;0.814, CHB:1.0;0.947, JPT:1.0;1.0 FUNCTIONAL_SNP rs2292572 chr11 78052864 Exon,non-coding 7 42509 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.898;0.552 FUNCTIONAL_SNP rs7113042 chr11 78035832 Exon,non-coding 6 59541 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.912;0.711 FUNCTIONAL_SNP rs10899483 chr11 78061057 Intron 2b 34316 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs7104222 chr11 78007169 Intron 3a 88204 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2063730 chr11 78048524 Intron 3a 46849 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs4944195 chr11 78003499 Intron 3a 91874 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs4291702 chr11 78001248 Intron 4 94125 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.591 FUNCTIONAL_SNP rs2512522 chr11 77925855 Intergenic 4 169518 CEU:1.0;0.827, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs2510033 chr11 77941771 Intron 4 153602 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs4245459 chr11 78065959 Intron 4 29414 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899476 chr11 78051794 Intron 5a 43579 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899485 chr11 78072383 Intron 5a 22990 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899486 chr11 78072398 Intron 5a 22975 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs9651769 chr11 77996166 Intron 5a 99207 CEU:1.0;0.827, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs1893448 chr11 77969180 Intron 5a 126193 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs11237469 chr11 78072875 Intron 5a 22498 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs1385601 chr11 77936064 Intron 5a 159309 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.893;0.507 FUNCTIONAL_SNP rs1567890 chr11 78101700 Intron 5a 6327 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2512519 chr11 77953015 Intron 5a 142358 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2450123 chr11 77952771 Intron 5a 142602 CEU:1.0;0.827, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2510047 chr11 77988668 Intron 5a 106705 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.898;0.552 FUNCTIONAL_SNP rs2511171 chr11 77930935 Intron 5a 164438 CEU:1.0;0.815, CHB:0.941;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs10751287 chr11 78072476 Intron 5a 22897 CEU:1.0;0.906, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.898;0.552 FUNCTIONAL_SNP rs10793295 chr11 77996521 Intron 5a 98852 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs1318241 chr11 77930792 Intron 5a 164581 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899475 chr11 78051610 Intron 5b 43763 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10793308 chr11 78086005 Intron 5b 9368 CEU:1.0;0.907, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.676 FUNCTIONAL_SNP rs1017908 chr11 77948095 Intron 5b 147278 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs11237471 chr11 78082604 Intron 5b 12769 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1893447 chr11 77973182 Intron 5b 122191 CEU:1.0;0.828, CHB:1.0;0.951, JPT:1.0;1.0, YRI:0.898;0.552 FUNCTIONAL_SNP rs2256464 chr11 77917305 Intron 5b 178068 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs4945261 chr11 77990260 Intron 5b 105113 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs7116611 chr11 78030046 Intron 5b 65327 CEU:1.0;0.828, CHB:0.948;0.855, JPT:1.0;1.0 FUNCTIONAL_SNP rs2450139 chr11 77924544 Intron 5b 170829 CEU:1.0;0.906, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs6592772 chr11 78015563 Intron 5b 79810 CEU:1.0;0.828, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs729354 chr11 77962453 Intron 5b 132920 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10501426 chr11 78057122 Intron 5b 38251 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.898;0.552 FUNCTIONAL_SNP rs2511158 chr11 77973980 Intron 5b 121393 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2511159 chr11 77974193 Intron 5b 121180 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2256187 chr11 77919768 Intron 5b 175605 CEU:1.0;0.828 FUNCTIONAL_SNP rs948662 chr11 77979829 Intron 5b 115544 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs11237458 chr11 78050849 Intron 5b 44524 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.63 FUNCTIONAL_SNP rs4128206 chr11 78015952 Intron 5b 79421 CEU:1.0;0.8, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs7939352 chr11 78003151 Intron 5b 92222 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.554 FUNCTIONAL_SNP rs10899487 chr11 78085474 Intron 6 9899 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs7112234 chr11 78102470 Intron 6 7097 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs4492844 chr11 78026516 Intron 6 68857 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs1017907 chr11 77959124 Intron 6 136249 CEU:1.0;0.827, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs11601161 chr11 78073280 Intron 6 22093 CEU:1.0;0.899, CHB:0.94;0.835, JPT:1.0;0.884 FUNCTIONAL_SNP rs7119933 chr11 78049750 Intron 6 45623 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.618 FUNCTIONAL_SNP rs7939646 chr11 78111613 Intron 6 16240 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.679 FUNCTIONAL_SNP rs7115850 chr11 78045071 Intron 6 50302 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;0.613 FUNCTIONAL_SNP rs4945265 chr11 78027458 Intron 6 67915 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899467 chr11 78014057 Intron 6 81316 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs11602622 chr11 78010830 Intron 6 84543 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs1007837 chr11 77941076 Intron 6 154297 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2511175 chr11 77975081 Intron 6 120292 CEU:1.0;0.828, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs10793302 chr11 78040961 Intron 6 54412 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2292573 chr11 78053139 Intron 6 42234 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10793311 chr11 78104399 Intron 6 9026 CEU:1.0;0.89, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs4945270 chr11 78068216 Intron 6 27157 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2244508 chr11 77948515 Intron 6 146858 CEU:1.0;0.906, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899456 chr11 78000155 Intron 7 95218 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899468 chr11 78016650 Intron 7 78723 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899469 chr11 78018313 Intron 7 77060 CEU:1.0;0.828, CHB:0.946;0.851, JPT:1.0;0.951 FUNCTIONAL_SNP rs10899477 chr11 78052104 Intron 7 43269 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899479 chr11 78052539 Intron 7 42834 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899481 chr11 78058721 Intron 7 36652 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899490 chr11 78105879 Intron 7 10506 CEU:1.0;0.906, CHB:1.0;0.952, JPT:1.0;0.909, YRI:1.0;1.0 FUNCTIONAL_SNP rs10899492 chr11 78109810 Intron 7 14437 CEU:1.0;0.907, CHB:1.0;0.945, JPT:1.0;1.0, YRI:0.851;0.609 FUNCTIONAL_SNP rs9651768 chr11 77996020 Intron 7 99353 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs11237441 chr11 78005070 Intron 7 90303 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs7117238 chr11 78040259 Intron 7 55114 CEU:1.0;0.906, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899470 chr11 78020052 Intron 7 75321 CEU:1.0;0.827 FUNCTIONAL_SNP rs2512545 chr11 77957120 Intron 7 138253 CEU:1.0;0.828 FUNCTIONAL_SNP rs2512546 chr11 77957276 Intron 7 138097 CEU:1.0;0.827, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2512549 chr11 77940163 Intron 7 155210 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2512550 chr11 77943848 Intron 7 151525 CEU:1.0;0.827, CHB:1.0;0.952, JPT:1.0;0.953 FUNCTIONAL_SNP rs2450128 chr11 77940075 Intron 7 155298 CEU:1.0;0.815, CHB:1.0;0.935, JPT:1.0;1.0 FUNCTIONAL_SNP rs2450129 chr11 77940385 Intron 7 154988 CEU:1.0;0.827, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs2450131 chr11 77944568 Intron 7 150805 CEU:1.0;0.814, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs2510038 chr11 77966034 Intron 7 129339 CEU:1.0;0.828, CHB:1.0;0.95, JPT:1.0;0.953 FUNCTIONAL_SNP rs2510039 chr11 77944480 Intron 7 150893 CEU:1.0;0.828, CHB:0.948;0.855, JPT:1.0;1.0 FUNCTIONAL_SNP rs2510040 chr11 77944548 Intron 7 150825 CEU:1.0;0.827, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs2510054 chr11 77959659 Intron 7 135714 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs4417308 chr11 78013492 Intron 7 81881 CEU:1.0;0.815, CHB:1.0;0.952, JPT:1.0;0.953 FUNCTIONAL_SNP rs7105835 chr11 78075725 Intron 7 19648 CEU:1.0;0.907, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs2511169 chr11 77965321 Intron 7 130052 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2511170 chr11 77980582 Intron 7 114791 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs4944198 chr11 78032605 Intron 7 62768 CEU:1.0;0.907, CHB:1.0;0.905, JPT:1.0;1.0 FUNCTIONAL_SNP rs2511178 chr11 77923220 Intron 7 172153 CEU:1.0;0.826, CHB:1.0;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs2511187 chr11 77985849 Intron 7 109524 CEU:1.0;0.827, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10793304 chr11 78064907 Intron 7 30466 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10793310 chr11 78099014 Intron 7 3641 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs1006441 chr11 77932126 Intron 7 163247 CEU:1.0;0.828, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs10793309 chr11 78093799 Intron 7 1574 CEU:0.898;0.806, CHB:0.927;0.753, JPT:1.0;0.8, YRI:0.944;0.805 FUNCTIONAL_SNP rs11237442 chr11 78005078 Intron 7 90295 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs12277648 chr11 78054336 Intron 7 41037 CEU:1.0;0.906, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.944;0.574 FUNCTIONAL_SNP rs7116698 chr11 77995191 Intron 7 100182 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs11237477 chr11 78095069 Intron 7 304 CEU:1.0;0.879, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs731600 chr11 77963133 Intron 7 132240 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10899451 chr11 77991222 Intron 7 104151 CEU:1.0;0.827, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs4134379 chr11 77992588 Intron 7 102785 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs901104 chr11 77930499 Intron 7 164874 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs10793299 chr11 78018954 Intron 7 76419 CEU:1.0;0.827, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs7101429 chr11 77992967 Intron 7 102406 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;0.953 FUNCTIONAL_SNP rs10793300 chr11 78019582 Intron 7 75791 CEU:1.0;0.899 FUNCTIONAL_SNP rs2373115 chr11 78091150 Intron 7 4223 CEU:1.0;0.907, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10899452 chr11 77995143 Intron 7 100230 CEU:1.0;0.828, CHB:1.0;0.952, JPT:1.0;1.0 LEAD_SNP rs530965 chr11 79065101 Intron 2b ASSOCIATION 17903297 Cognitive test performance 5.39794000867 ODZ4 LEAD_SNP rs12290811 chr11 79083620 Intron 5b ASSOCIATION 18711365 Bipolar disorder 5.39794000867 ODZ4 FUNCTIONAL_SNP rs10501439 chr11 79085846 Intron 5b 2226 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1944449 chr11 79083249 Intron 6 371 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1357339 chr11 80854375 Intergenic 7 ASSOCIATION 20205591 HIV-1 control 5.30102999566 ODZ4 - RPS28P7 LEAD_SNP rs1458095 chr11 80985548 Intergenic 6 ASSOCIATION 19851299 Body mass index 5.15490195999 ODZ4 - RPS28P7 LEAD_SNP rs3885683 chr11 83455707 Intron 7 ASSOCIATION 18464913 Protein quantitative trait loci 5.09691001301 DLG2 LEAD_SNP rs10501570 chr11 84417846 Intron 7 ASSOCIATION 17052657 Parkinson's disease 5.15490195999 DLG2 LEAD_SNP rs1452928 chr11 84822321 Intron 7 ASSOCIATION 17903296 Hip geometry 6.15490195999 DLG2 LEAD_SNP rs10898392 chr11 85164751 Intron 7 ASSOCIATION 19570815 Height 5.52287874528 DLG2 FUNCTIONAL_SNP rs575050 chr11 85339542 Intergenic 2a 174791 CEU:0.919;0.813, CHB:1.0;0.954, YRI:0.952;0.73 LEAD_SNP rs536841 chr11 85787824 Intergenic 5a ASSOCIATION 21627779 Alzheimer's disease 8.52287874528 PICALM - FNTAL1 FUNCTIONAL_SNP rs561646 chr11 85746037 Intron 4 41787 CEU:1.0;0.958, CHB:1.0;0.627, JPT:1.0;0.588 FUNCTIONAL_SNP rs493254 chr11 85765298 Intron 5b 22526 CEU:1.0;1.0, CHB:1.0;0.621, JPT:1.0;0.609, YRI:1.0;1.0 FUNCTIONAL_SNP rs541458 chr11 85788351 Intergenic 5b 527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs867611 chr11 85776544 Intron 5b 11280 CEU:1.0;0.946, CHB:1.0;0.639, JPT:1.0;0.558, YRI:1.0;0.587 FUNCTIONAL_SNP rs561655 chr11 85800279 Intergenic 5b 12455 CEU:1.0;0.844, CHB:0.946;0.742, JPT:1.0;0.953 FUNCTIONAL_SNP rs602222 chr11 85718231 Intron 6 69593 CEU:1.0;0.955, CHB:0.934;0.615, JPT:1.0;0.555 FUNCTIONAL_SNP rs2508696 chr11 85717923 Intron 6 69901 CEU:1.0;0.957, CHB:0.935;0.575, JPT:1.0;0.588, YRI:1.0;0.825 FUNCTIONAL_SNP rs609903 chr11 85740409 Intron 7 47415 CEU:1.0;0.958, CHB:0.935;0.575, JPT:1.0;0.588 FUNCTIONAL_SNP rs669813 chr11 85762244 Intron 7 25580 CEU:1.0;0.914, CHB:1.0;0.605, JPT:1.0;0.589, YRI:1.0;1.0 FUNCTIONAL_SNP rs677909 chr11 85757589 Intron 7 30235 CEU:1.0;0.958, CHB:1.0;0.612, JPT:1.0;0.588, YRI:1.0;1.0 FUNCTIONAL_SNP rs645299 chr11 85691810 Intron 7 96014 CEU:1.0;0.953, CHB:0.921;0.542, JPT:1.0;0.538, YRI:1.0;0.606 FUNCTIONAL_SNP rs694011 chr11 85760028 Intron 7 27796 CEU:1.0;0.955, CHB:1.0;0.602, JPT:1.0;0.551, YRI:1.0;0.825 FUNCTIONAL_SNP rs676733 chr11 85734010 Intron 7 53814 CEU:0.956;0.915, CHB:0.933;0.566, JPT:1.0;0.538, YRI:1.0;0.701 FUNCTIONAL_SNP rs2508691 chr11 85750671 Intron 7 37153 CEU:1.0;0.957, CHB:1.0;0.627, JPT:1.0;0.582, YRI:1.0;1.0 FUNCTIONAL_SNP rs682928 chr11 85741130 Intron 7 46694 CEU:1.0;0.958, CHB:0.935;0.642, JPT:1.0;0.572, YRI:1.0;1.0 LEAD_SNP rs561655 chr11 85800279 Intergenic 5b ASSOCIATION 21460841 Alzheimer's disease (late onset) 10.15490196 PICALM - FNTAL1 FUNCTIONAL_SNP rs1237999 chr11 85815030 Intergenic 2a 14751 CEU:0.916;0.84, CHB:1.0;0.83, JPT:1.0;0.617, YRI:1.0;1.0 FUNCTIONAL_SNP rs526904 chr11 85811364 Intergenic 4 11085 CEU:0.916;0.84, CHB:1.0;0.792, JPT:1.0;0.617, YRI:1.0;1.0 FUNCTIONAL_SNP rs561646 chr11 85746037 Intron 4 54242 CEU:0.954;0.803, CHB:1.0;0.756, JPT:1.0;0.617 FUNCTIONAL_SNP rs536841 chr11 85787824 Intergenic 5a 12455 CEU:1.0;0.844, CHB:0.946;0.742, JPT:1.0;0.953 FUNCTIONAL_SNP rs543293 chr11 85820077 Intergenic 5b 19798 CEU:0.914;0.801, CHB:1.0;0.83, JPT:1.0;0.587 FUNCTIONAL_SNP rs493254 chr11 85765298 Intron 5b 34981 CEU:1.0;0.8, CHB:1.0;0.834, JPT:1.0;0.643 FUNCTIONAL_SNP rs541458 chr11 85788351 Intergenic 5b 11928 CEU:1.0;0.844, CHB:0.946;0.742, JPT:1.0;0.953 FUNCTIONAL_SNP rs586274 chr11 85814486 Intergenic 6 14207 CEU:0.914;0.801, CHB:1.0;0.792, JPT:1.0;0.617 FUNCTIONAL_SNP rs2508696 chr11 85717923 Intron 6 82356 CEU:0.954;0.8, CHB:0.945;0.707, JPT:1.0;0.617 FUNCTIONAL_SNP rs609903 chr11 85740409 Intron 7 59870 CEU:0.954;0.803, CHB:0.945;0.707, JPT:1.0;0.617 FUNCTIONAL_SNP rs677909 chr11 85757589 Intron 7 42690 CEU:0.954;0.803, CHB:1.0;0.783, JPT:1.0;0.617 FUNCTIONAL_SNP rs497816 chr11 85812210 Intergenic 7 11931 CEU:0.913;0.834, CHB:1.0;0.771, JPT:1.0;0.61, YRI:1.0;1.0 FUNCTIONAL_SNP rs567075 chr11 85830157 Intergenic 7 29878 CEU:1.0;0.881, CHB:1.0;0.792, JPT:1.0;0.617 FUNCTIONAL_SNP rs2508691 chr11 85750671 Intron 7 49608 CEU:0.954;0.8, CHB:1.0;0.756, JPT:1.0;0.611 FUNCTIONAL_SNP rs682928 chr11 85741130 Intron 7 59149 CEU:0.954;0.803, CHB:0.946;0.85, JPT:1.0;0.602 LEAD_SNP rs3851179 chr11 85868640 Intergenic 7 ASSOCIATION 19734902 Alzheimer's disease 9.0 PICALM - FNTAL1 FUNCTIONAL_SNP rs10792832 chr11 85867875 Intergenic 5b 765 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs7110631 chr11 85856187 Intergenic 5b 12453 CEU:1.0;0.815, CHB:1.0;0.91, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7941541 chr11 85858538 Intergenic 7 10102 CEU:1.0;0.811, CHB:1.0;0.91, JPT:1.0;1.0, YRI:1.0;0.849 LEAD_SNP rs6592284 chr11 86055901 Exon,non-coding 7 ASSOCIATION 19734545 Cognitive performance 5.69897000434 C11orf73 LEAD_SNP rs1386330 chr11 87819427 Intron 4 ASSOCIATION 19010793 Multiple sclerosis (age of onset) 5.69897000434 TMEM135 - RAB38 LEAD_SNP rs16914280 chr11 88321724 Intron 7 ASSOCIATION 20041166 HIV-1 control 6.52287874528 GRM5 LEAD_SNP rs10831496 chr11 88557991 Intron 7 ASSOCIATION 19340012 Tanning 8.30102999566 GRM5 FUNCTIONAL_SNP rs6483483 chr11 88553111 Intron 6 4880 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7109255 chr11 88552381 Intron 6 5610 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11021475 chr11 88559928 Intron 6 1937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs480015 chr11 88564533 Intron 6 6542 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs10765794 chr11 88551881 Intron 6 6110 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10501686 chr11 88531777 Intron 7 26214 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs6483475 chr11 88543756 Intron 7 14235 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10765797 chr11 88557196 Intron 7 795 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1042602 chr11 88911696 Coding 7 ASSOCIATION 17952075 Freckles 10.6989700043 TYR ASSOCIATION 17999355 Skin pigmentation 9.39794000867 TYR LEAD_SNP rs1847134 chr11 89005253 Intron 7 ASSOCIATION 20585627 Eye color 15.0 TYR FUNCTIONAL_SNP rs1126809 chr11 89017961 Coding 7 12708 CEU:1.0;0.943 FUNCTIONAL_SNP rs3900053 chr11 89021065 Intron 6 15812 CEU:0.914;0.836, CHB:1.0;0.719, JPT:1.0;1.0 FUNCTIONAL_SNP rs1847140 chr11 89037064 Intergenic 6 31811 CEU:1.0;0.887, CHB:1.0;0.766, JPT:1.0;0.842, YRI:0.935;0.734 FUNCTIONAL_SNP rs10830253 chr11 89028043 Intron 7 22790 CEU:1.0;1.0, CHB:1.0;0.768, JPT:1.0;1.0, YRI:0.928;0.509 FUNCTIONAL_SNP rs4121403 chr11 89024455 Intron 7 19202 CEU:1.0;1.0, CHB:1.0;0.768, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs7101897 chr11 89007922 Intron 7 2669 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:0.934;0.658 FUNCTIONAL_SNP rs1847142 chr11 89021574 Intron 7 16321 CEU:1.0;1.0, CHB:1.0;0.768, JPT:1.0;0.92, YRI:1.0;0.88 LEAD_SNP rs1393350 chr11 89011046 Intron 7 ASSOCIATION 20585627 Eye color 8.52287874528 TYR ASSOCIATION 20410501 Vitiligo 17.6989700043 TYR ASSOCIATION 19578364 Melanoma 13.6989700043 TYR ASSOCIATION 19340012 Tanning 12.6989700043 TYR ASSOCIATION 17952075 Blue vs. green eyes 11.5228787453 TYR ASSOCIATION 17952075 Skin sensitivity to sun 5.69897000434 TYR FUNCTIONAL_SNP rs1126809 chr11 89017961 Coding 7 6915 CEU:1.0;0.827 FUNCTIONAL_SNP rs12791412 chr11 88930581 Intron 6 80465 CEU:1.0;0.936 FUNCTIONAL_SNP rs12270717 chr11 88912190 Intron 6 98856 CEU:1.0;0.872 FUNCTIONAL_SNP rs10765196 chr11 88925242 Intron 7 85804 CEU:1.0;1.0 FUNCTIONAL_SNP rs10765198 chr11 88969774 Intron 7 41272 CEU:1.0;1.0 FUNCTIONAL_SNP rs10765200 chr11 88971684 Intron 7 39362 CEU:1.0;0.932 FUNCTIONAL_SNP rs10765201 chr11 88971704 Intron 7 39342 CEU:1.0;0.933 FUNCTIONAL_SNP rs11018528 chr11 88930377 Intron 7 80669 CEU:1.0;1.0 FUNCTIONAL_SNP rs4512823 chr11 88966584 Intron 7 44462 CEU:1.0;0.87 FUNCTIONAL_SNP rs10501698 chr11 88977364 Intron 7 33682 CEU:1.0;0.868 FUNCTIONAL_SNP rs7107143 chr11 88931487 Intron 7 79559 CEU:1.0;0.827 FUNCTIONAL_SNP rs7358418 chr11 88970138 Intron 7 40908 CEU:1.0;0.936 FUNCTIONAL_SNP rs17793678 chr11 88921524 Intron 7 89522 CEU:1.0;1.0 LEAD_SNP rs1488902 chr11 89345025 Intergenic 7 ASSOCIATION 20801717 Amyotrophic lateral sclerosis 5.52287874528 NOX4 - FOLH1B LEAD_SNP rs11018874 chr11 89875437 Intron 6 ASSOCIATION 21738478 White blood cell types 8.69897000434 NAALAD2 LEAD_SNP rs12274302 chr11 90586900 Intergenic 7 ASSOCIATION 20041166 HIV-1 control 6.39794000867 CHORDC1 - RPL7AP57 LEAD_SNP rs1528753 chr11 90884339 Intergenic 7 ASSOCIATION 17903295 Aging traits 7.09691001301 CHORDC1 - RPL7AP57 FUNCTIONAL_SNP rs1528738 chr11 90879295 Intergenic 3b 5044 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.865, YRI:1.0;1.0 FUNCTIONAL_SNP rs1406392 chr11 90871691 Intergenic 6 12648 CEU:1.0;1.0, CHB:1.0;0.852, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7947336 chr11 90869326 Intergenic 7 15013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2388789 chr11 90868586 Intergenic 7 15753 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1547595 chr11 90874779 Intergenic 7 9560 CEU:1.0;1.0, CHB:1.0;0.836, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1350445 chr11 91952154 Intergenic 6 ASSOCIATION 17903303 Subclinical atherosclerosis traits (other) 5.04575749056 RPL7AP57 - NDUFB11P1 FUNCTIONAL_SNP rs10765542 chr11 91952283 Intergenic 6 129 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10501784 chr11 91952544 Intergenic 7 390 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1379801 chr11 91949035 Intergenic 7 3119 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7950811 chr11 92651002 Intergenic 7 ASSOCIATION 20585324 Conduct disorder (case status) 6.04575749056 RPS3AP42 - MTNR1B ASSOCIATION 20585324 Conduct disorder (symptom count) 8.0 RPS3AP42 - MTNR1B FUNCTIONAL_SNP rs1838977 chr11 92652638 Intergenic 7 1636 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2028979 chr11 92652273 Intergenic 7 1271 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1387153 chr11 92673828 Intergenic 5b ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 8.69897000434 RPS3AP42 - MTNR1B ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 8.09691001301 RPS3AP42 - MTNR1B ASSOCIATION 20858683 Glycated hemoglobin levels 10.3979400087 RPS3AP42 - MTNR1B ASSOCIATION 20581827 Type 2 diabetes 14.096910013 RPS3AP42 - MTNR1B ASSOCIATION 19060909 Fasting plasma glucose 35.6989700043 RPS3AP42 - MTNR1B FUNCTIONAL_SNP rs10765573 chr11 92683332 Intergenic 5b 9504 CEU:1.0;0.867, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.814 FUNCTIONAL_SNP rs10830956 chr11 92681013 Intergenic 6 7185 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.953, YRI:1.0;0.964 FUNCTIONAL_SNP rs7936247 chr11 92690032 Intergenic 7 16204 CEU:1.0;0.856, CHB:1.0;0.95, JPT:1.0;0.949, YRI:1.0;0.879 FUNCTIONAL_SNP rs11523890 chr11 92679778 Intergenic 7 5950 CEU:1.0;0.866, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.832 FUNCTIONAL_SNP rs11020124 chr11 92690661 Intergenic 7 16833 CEU:1.0;0.949, CHB:1.0;0.951, JPT:1.0;0.902, YRI:1.0;0.881 FUNCTIONAL_SNP rs7112766 chr11 92672021 Intergenic 7 1807 CEU:0.944;0.843, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10830956 chr11 92681013 Intergenic 6 ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 10.3010299957 RPS3AP42 - MTNR1B FUNCTIONAL_SNP rs10765573 chr11 92683332 Intergenic 5b 2319 CEU:1.0;0.874, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs1387153 chr11 92673828 Intergenic 5b 7185 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.953, YRI:1.0;0.964 FUNCTIONAL_SNP rs7936247 chr11 92690032 Intergenic 7 9019 CEU:1.0;0.865, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.856 FUNCTIONAL_SNP rs11523890 chr11 92679778 Intergenic 7 1235 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs11020124 chr11 92690661 Intergenic 7 9648 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.857 FUNCTIONAL_SNP rs7112766 chr11 92672021 Intergenic 7 8992 CEU:0.945;0.846, CHB:1.0;0.948, JPT:1.0;0.943 LEAD_SNP rs2166706 chr11 92691532 Intergenic 7 ASSOCIATION 19651812 Fasting plasma glucose 8.69897000434 RPS3AP42 - MTNR1B FUNCTIONAL_SNP rs10830961 chr11 92694757 Intergenic 6 3225 CEU:0.957;0.917, CHB:0.95;0.86, JPT:1.0;0.909 FUNCTIONAL_SNP rs10830962 chr11 92698427 Intergenic 6 6895 CEU:0.957;0.917, CHB:0.832;0.602, JPT:0.899;0.771 FUNCTIONAL_SNP rs7933855 chr11 92684322 Intergenic 7 7210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10830963 chr11 92708710 Intron 4 ASSOCIATION 20081858 Fasting glucose-related traits 174.22184875 MTNR1B ASSOCIATION 20081858 Fasting glucose-related traits 42.5228787453 MTNR1B ASSOCIATION 19060907 Fasting plasma glucose 49.5228787453 MTNR1B LEAD_SNP rs1447352 chr11 92722761 Intergenic 7 ASSOCIATION 19060910 Other metabolic traits 7.22184874962 MTNR1B - RPL26P31 FUNCTIONAL_SNP rs1562444 chr11 92715849 Exon,non-coding 7 6912 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs7121092 chr11 92724351 Intergenic 5a 1590 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6483213 chr11 92725321 Intergenic 5a 2560 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs4753072 chr11 92717405 Intergenic 5b 5356 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4406791 chr11 92721787 Intergenic 7 974 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4611171 chr11 92719207 Intergenic 7 3554 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1447351 chr11 92718163 Intergenic 7 4598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1597023 chr11 92721319 Intergenic 7 1442 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2212361 chr11 94312323 Intron 7 ASSOCIATION 18846501 Attention deficit hyperactivity disorder symptoms (interaction) 6.04575749056 PIWIL4 FUNCTIONAL_SNP rs2186624 chr11 94311318 Intron 3a 1005 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11020836 chr11 94308892 Intron 5a 3431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12574292 chr11 94319818 Intron 6 7495 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10831284 chr11 94667964 Intergenic 6 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.69897000434 ST13P11 - CWC15 LEAD_SNP rs1939875 chr11 95422867 Intergenic 7 ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 5.52287874528 SESN3 - FAM76B FUNCTIONAL_SNP rs4237575 chr11 95417293 Intergenic 6 5574 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;0.753 LEAD_SNP rs10765792 chr11 95866700 Intron 5b ASSOCIATION 21658281 Sudden cardiac arrest 12.096910013 MAML2 FUNCTIONAL_SNP rs557233 chr11 95931859 Intron 2b 65159 CEU:1.0;1.0 FUNCTIONAL_SNP rs570792 chr11 95936837 Intron 4 70137 CEU:1.0;1.0 FUNCTIONAL_SNP rs477049 chr11 95931794 Intron 4 65094 CEU:1.0;1.0 FUNCTIONAL_SNP rs488964 chr11 95927699 Intron 5b 60999 CEU:1.0;0.897 FUNCTIONAL_SNP rs578661 chr11 95934652 Intron 7 67952 CEU:1.0;1.0 FUNCTIONAL_SNP rs511797 chr11 95895139 Intron 7 28439 CEU:1.0;0.846 LEAD_SNP rs7115578 chr11 96000100 Intron 7 ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 5.09691001301 MAML2 LEAD_SNP rs11212364 chr11 97574984 Intergenic 6 ASSOCIATION 21130836 Information processing speed 5.52287874528 JRKL - CNTN5 FUNCTIONAL_SNP rs11211995 chr11 97495679 Intergenic 5b 79305 CEU:1.0;1.0 FUNCTIONAL_SNP rs627611 chr11 97560081 Intergenic 6 14903 CEU:1.0;1.0, CHB:1.0;0.549 FUNCTIONAL_SNP rs1849139 chr11 97560262 Intergenic 6 14722 CEU:1.0;1.0, CHB:1.0;0.55 FUNCTIONAL_SNP rs11212342 chr11 97570960 Intergenic 6 4024 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.527 FUNCTIONAL_SNP rs12225350 chr11 97500252 Intergenic 6 74732 CEU:1.0;1.0 FUNCTIONAL_SNP rs12221937 chr11 97572294 Intergenic 6 2690 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.526 FUNCTIONAL_SNP rs11212415 chr11 97584877 Intergenic 6 9893 CEU:1.0;1.0, CHB:0.842;0.71, JPT:1.0;0.569 FUNCTIONAL_SNP rs11212290 chr11 97556389 Intergenic 7 18595 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.569 FUNCTIONAL_SNP rs11212344 chr11 97571686 Intergenic 7 3298 CEU:1.0;1.0, CHB:1.0;0.846 FUNCTIONAL_SNP rs12786105 chr11 97567834 Intergenic 7 7150 CEU:1.0;1.0 FUNCTIONAL_SNP rs12226488 chr11 97573387 Intergenic 7 1597 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17130211 chr11 97584174 Intergenic 7 9190 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.569 FUNCTIONAL_SNP rs11212399 chr11 97580643 Intergenic 7 5659 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.569 LEAD_SNP rs2405657 chr11 97682564 Intergenic 6 ASSOCIATION 19734901 Amyotrophic lateral sclerosis 5.52287874528 JRKL - CNTN5 FUNCTIONAL_SNP rs10749930 chr11 97685829 Intergenic 5b 3265 CEU:0.951;0.824, CHB:1.0;0.738, JPT:1.0;0.951, YRI:1.0;0.795 FUNCTIONAL_SNP rs7109674 chr11 97681945 Intergenic 6 619 CEU:1.0;0.828, CHB:1.0;0.867, JPT:1.0;0.861, YRI:1.0;0.68 FUNCTIONAL_SNP rs10890892 chr11 97676449 Intergenic 7 6115 CEU:1.0;0.884, CHB:1.0;0.891, JPT:1.0;0.896, YRI:0.937;0.671 FUNCTIONAL_SNP rs10789687 chr11 97680206 Intergenic 7 2358 CEU:1.0;0.828, CHB:1.0;0.867, JPT:1.0;0.863 FUNCTIONAL_SNP rs10789690 chr11 97683887 Intergenic 7 1323 CEU:1.0;0.823, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.795 LEAD_SNP rs2509843 chr11 98125404 Intergenic 6 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.69897000434 JRKL - CNTN5 FUNCTIONAL_SNP rs2848520 chr11 98098071 Intergenic 5b 27333 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.916;0.839 FUNCTIONAL_SNP rs11214292 chr11 98062032 Intergenic 5b 63372 CEU:1.0;0.835, CHB:1.0;0.857, JPT:1.0;0.857, YRI:0.955;0.838 FUNCTIONAL_SNP rs4590842 chr11 98079239 Intergenic 5b 46165 CEU:1.0;0.918, CHB:1.0;0.857, JPT:1.0;0.86, YRI:0.915;0.802 FUNCTIONAL_SNP rs2848523 chr11 98132507 Intergenic 6 7103 CEU:1.0;0.84, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.918 FUNCTIONAL_SNP rs7934938 chr11 98076707 Intergenic 6 48697 CEU:1.0;0.906, CHB:1.0;0.841, JPT:1.0;0.846, YRI:0.953;0.867 FUNCTIONAL_SNP rs2848519 chr11 98113179 Intergenic 6 12225 CEU:1.0;0.84, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.879 FUNCTIONAL_SNP rs11214294 chr11 98062389 Intergenic 6 63015 CEU:1.0;0.915, CHB:1.0;0.853, JPT:1.0;0.86, YRI:0.908;0.727 FUNCTIONAL_SNP rs2155907 chr11 98094673 Intergenic 7 30731 CEU:1.0;0.84, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.915;0.838 FUNCTIONAL_SNP rs1941765 chr11 98102558 Intergenic 7 22846 CEU:1.0;0.837, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.916;0.839 FUNCTIONAL_SNP rs1941776 chr11 98104605 Intergenic 7 20799 CEU:1.0;0.84, CHB:1.0;0.95, JPT:1.0;1.0, YRI:0.957;0.879 FUNCTIONAL_SNP rs1941782 chr11 98141930 Intergenic 7 16526 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:0.916;0.839 FUNCTIONAL_SNP rs1941784 chr11 98140562 Intergenic 7 15158 CEU:1.0;0.837, JPT:1.0;0.901 FUNCTIONAL_SNP rs1941790 chr11 98123818 Intergenic 7 1586 CEU:1.0;0.837, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs10891440 chr11 98077522 Intergenic 7 47882 CEU:1.0;0.911, CHB:1.0;0.894, JPT:1.0;0.901, YRI:0.954;0.832 FUNCTIONAL_SNP rs2848546 chr11 98124120 Intergenic 7 1284 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.674 FUNCTIONAL_SNP rs2848497 chr11 98119560 Intergenic 7 5844 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.903 FUNCTIONAL_SNP rs1941803 chr11 98121752 Intergenic 7 3652 CEU:1.0;0.839, CHB:1.0;1.0, JPT:1.0;0.95, YRI:0.958;0.917 FUNCTIONAL_SNP rs11214383 chr11 98080379 Intergenic 7 45025 CEU:1.0;0.918, CHB:1.0;0.857, JPT:1.0;0.86, YRI:0.915;0.802 FUNCTIONAL_SNP rs10891442 chr11 98077700 Intergenic 7 47704 CEU:1.0;0.909, CHB:1.0;0.851, JPT:1.0;0.883, YRI:0.953;0.83 FUNCTIONAL_SNP rs11827747 chr11 98070505 Intergenic 7 54899 CEU:1.0;0.918, CHB:1.0;0.857, JPT:1.0;0.86 FUNCTIONAL_SNP rs723513 chr11 98083543 Intergenic 7 41861 CEU:1.0;0.918, CHB:1.0;0.857, JPT:1.0;0.86, YRI:0.915;0.802 FUNCTIONAL_SNP rs723515 chr11 98083345 Intergenic 7 42059 CEU:1.0;0.918, CHB:1.0;0.857, JPT:1.0;0.86, YRI:0.957;0.843 FUNCTIONAL_SNP rs2852034 chr11 98112493 Intergenic 7 12911 CEU:1.0;0.84, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.918 FUNCTIONAL_SNP rs2848547 chr11 98123504 Intergenic 7 1900 CEU:1.0;0.84, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.918 FUNCTIONAL_SNP rs2848479 chr11 98087599 Intergenic 7 37805 CEU:1.0;0.918, CHB:1.0;0.857, JPT:1.0;0.86, YRI:0.916;0.839 LEAD_SNP rs4237591 chr11 98466268 Intergenic 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 5.69897000434 JRKL - CNTN5 FUNCTIONAL_SNP rs10128544 chr11 98461972 Intergenic 5a 4296 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.901, YRI:1.0;0.593 FUNCTIONAL_SNP rs4310577 chr11 98463315 Intergenic 6 2953 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;0.569 FUNCTIONAL_SNP rs4754531 chr11 98466496 Intergenic 6 228 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs11216039 chr11 98459127 Intergenic 6 7141 CEU:0.957;0.917, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.721 FUNCTIONAL_SNP rs4326764 chr11 98463122 Intergenic 6 3146 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs10750094 chr11 98465358 Intergenic 7 910 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs4572109 chr11 98463019 Intergenic 7 3249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.587 LEAD_SNP rs10501920 chr11 99493173 Intron 6 ASSOCIATION 17903304 Atrial fibrillation 5.04575749056 CNTN5 FUNCTIONAL_SNP rs7107325 chr11 99499110 Intron 6 5937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.945 FUNCTIONAL_SNP rs11220671 chr11 99492475 Intron 7 698 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 LEAD_SNP rs952700 chr11 99585736 Intron 7 ASSOCIATION 17903297 Volumetric brain MRI 5.22184874962 CNTN5 FUNCTIONAL_SNP rs6590280 chr11 99581113 Intron 6 4623 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.931;0.813, YRI:1.0;0.877 FUNCTIONAL_SNP rs6590287 chr11 99586888 Intron 7 1152 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7942623 chr11 99584531 Intron 7 1205 CEU:1.0;0.93, CHB:1.0;1.0, JPT:0.931;0.813, YRI:1.0;0.915 LEAD_SNP rs2852894 chr11 102155474 Intergenic 7 ASSOCIATION 21116278 MRI atrophy measures 6.0 YAP1 - RPS6P17 FUNCTIONAL_SNP rs2852889 chr11 102156221 Intergenic 5a 747 CEU:1.0;1.0 FUNCTIONAL_SNP rs2852886 chr11 102157890 Intergenic 5a 2416 CEU:1.0;0.824 LEAD_SNP rs11225434 chr11 102691482 Intron 5b ASSOCIATION 20031604 Serum matrix metalloproteinase 28.0457574906 CSNK1A1P2 - MMP3 FUNCTIONAL_SNP rs602128 chr11 102713465 Coding 7 21983 CEU:1.0;0.923, CHB:1.0;1.0, JPT:0.939;0.882, YRI:0.96;0.795 FUNCTIONAL_SNP rs679620 chr11 102713620 Coding 7 22138 CEU:0.956;0.876, CHB:1.0;1.0, JPT:0.939;0.882, YRI:0.862;0.631 FUNCTIONAL_SNP rs520540 chr11 102709425 Coding 7 17943 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.923;0.791 FUNCTIONAL_SNP rs639752 chr11 102707339 Exon,non-coding 4 15857 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.959;0.765 FUNCTIONAL_SNP rs4754884 chr11 102702263 Exon,non-coding 4 10781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.924;0.823 FUNCTIONAL_SNP rs635746 chr11 102703628 Exon,non-coding 7 12146 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.919;0.755 FUNCTIONAL_SNP rs2097248 chr11 102690501 Intron 4 981 CEU:1.0;0.923, CHB:0.927;0.802, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs1010698 chr11 102701021 Intron 5b 9539 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.962;0.892 FUNCTIONAL_SNP rs678815 chr11 102713777 Intron 5b 22295 CEU:1.0;0.923, CHB:1.0;1.0, JPT:0.939;0.882, YRI:0.913;0.666 FUNCTIONAL_SNP rs2155013 chr11 102701858 Intron 6 10376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.926;0.857 FUNCTIONAL_SNP rs10895365 chr11 102694193 Intron 6 2711 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.929 FUNCTIONAL_SNP rs12792871 chr11 102698336 Intron 6 6854 CEU:1.0;0.961 FUNCTIONAL_SNP rs12804136 chr11 102691390 Intron 6 92 CEU:1.0;0.955, CHB:1.0;0.862, JPT:1.0;0.934, YRI:0.909;0.759 FUNCTIONAL_SNP rs7926920 chr11 102698724 Intron 6 7242 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.921;0.759 FUNCTIONAL_SNP rs591058 chr11 102711338 Intron 6 19856 CEU:1.0;0.923, CHB:1.0;1.0, JPT:0.939;0.882, YRI:0.911;0.638 FUNCTIONAL_SNP rs595840 chr11 102704897 Intron 7 13415 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.953;0.646 FUNCTIONAL_SNP rs645419 chr11 102716321 Intergenic 7 24839 CEU:1.0;0.923, CHB:1.0;1.0, JPT:0.937;0.878, YRI:0.911;0.659 FUNCTIONAL_SNP rs756544 chr11 102691162 Intron 7 320 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.711 FUNCTIONAL_SNP rs7126392 chr11 102697121 Intron 7 5639 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;0.938, YRI:1.0;0.921 FUNCTIONAL_SNP rs12801529 chr11 102693610 Intron 7 2128 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.962;0.892 LEAD_SNP rs495366 chr11 102695108 Intron 7 ASSOCIATION 20031604 Serum matrix metalloproteinase 33.2218487496 CSNK1A1P2 - MMP3 FUNCTIONAL_SNP rs529381 chr11 102680837 Intron 4 14271 CEU:1.0;0.891, CHB:1.0;0.95, JPT:1.0;0.947 FUNCTIONAL_SNP rs603050 chr11 102680229 Intron 7 14879 CEU:1.0;0.813, CHB:0.948;0.855, JPT:1.0;0.951, YRI:0.848;0.522 FUNCTIONAL_SNP rs683878 chr11 102705658 Intron 7 10550 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.958;0.789 FUNCTIONAL_SNP rs479095 chr11 102691894 Intron 7 3214 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.697 FUNCTIONAL_SNP rs650108 chr11 102708787 Intron 7 13679 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.697 LEAD_SNP rs716274 chr11 103418158 Intergenic 7 ASSOCIATION 21118971 Small-cell lung cancer 7.04575749056 DYNC2H1 - PDGFD FUNCTIONAL_SNP rs7125730 chr11 103419945 Intergenic 5b 1787 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs716273 chr11 103417868 Intergenic 5b 290 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7121346 chr11 103418935 Intergenic 6 777 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1917445 chr11 103589094 Intron 7 ASSOCIATION 21507922 Neutrophil count 6.22184874962 DYNC2H1 - PDGFD LEAD_SNP rs974819 chr11 103660567 Intron 7 ASSOCIATION 21378988 Coronary heart disease 8.69897000434 DYNC2H1 - PDGFD FUNCTIONAL_SNP rs2019090 chr11 103668962 Intron 4 8395 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.889 FUNCTIONAL_SNP rs2839812 chr11 103673294 Intron 7 12727 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11226029 chr11 103693627 Intron 7 33060 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.95 FUNCTIONAL_SNP rs2128739 chr11 103673277 Intron 7 12710 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10895547 chr11 103808152 Intron 7 ASSOCIATION 21347282 Coronary heart disease 5.52287874528 PDGFD FUNCTIONAL_SNP rs4145958 chr11 103817645 Intron 5b 9493 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs719619 chr11 103800978 Intron 6 7174 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.924 LEAD_SNP rs11226373 chr11 104334239 Intron 7 ASSOCIATION 20031604 Serum matrix metalloproteinase 17.6989700043 DDI1 - CASP12 FUNCTIONAL_SNP rs12225597 chr11 104338480 Intron 3a 4241 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1352283 chr11 104338340 Intron 4 4101 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17432191 chr11 104405081 Intron 4 70842 CEU:1.0;0.918, CHB:1.0;0.885, JPT:1.0;0.937 FUNCTIONAL_SNP rs7131338 chr11 104338562 Intron 5a 4323 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17102636 chr11 104417374 Intron 5b 83135 CEU:1.0;0.918, CHB:1.0;0.885, JPT:1.0;0.937 FUNCTIONAL_SNP rs1487694 chr11 104356169 Intron 5b 21930 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7947270 chr11 104407595 Intron 5b 73356 CEU:1.0;0.918, CHB:1.0;0.885, JPT:1.0;0.937 FUNCTIONAL_SNP rs1487715 chr11 104436389 Intron 5b 102150 CEU:1.0;0.918, CHB:1.0;1.0, JPT:0.936;0.876 FUNCTIONAL_SNP rs4558140 chr11 104372156 Intron 5b 37917 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7103622 chr11 104412986 Intron 6 78747 CEU:1.0;0.918, CHB:1.0;0.885, JPT:1.0;0.937 FUNCTIONAL_SNP rs11226381 chr11 104353043 Intron 6 18804 CEU:1.0;0.918, CHB:1.0;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs10791706 chr11 104362272 Intron 6 28033 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2101423 chr11 104351875 Intron 6 17636 CEU:1.0;0.898, CHB:1.0;0.87, JPT:1.0;1.0, YRI:1.0;0.516 FUNCTIONAL_SNP rs11226394 chr11 104375412 Intron 6 41173 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11226374 chr11 104335956 Intron 6 1717 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs2046652 chr11 104360654 Intron 6 26415 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1487692 chr11 104349863 Intron 6 15624 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1565131 chr11 104388262 Intron 6 54023 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs901715 chr11 104366089 Intron 6 31850 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10895697 chr11 104365086 Intron 6 30847 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7930608 chr11 104383926 Intron 6 49687 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11226416 chr11 104404920 Intron 6 70681 CEU:1.0;0.913, CHB:1.0;0.942, JPT:1.0;1.0 FUNCTIONAL_SNP rs10502035 chr11 104403209 Intron 6 68970 CEU:1.0;0.918, CHB:1.0;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs11226367 chr11 104321634 Intron 6 12605 CEU:1.0;0.855, CHB:0.936;0.826, JPT:1.0;1.0 FUNCTIONAL_SNP rs1906308 chr11 104333651 Intron 7 588 CEU:1.0;1.0, CHB:1.0;0.885, JPT:1.0;1.0, YRI:1.0;0.586 FUNCTIONAL_SNP rs7944328 chr11 104334328 Intron 7 89 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11226403 chr11 104385628 Intron 7 51389 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11226392 chr11 104375055 Intron 7 40816 CEU:1.0;0.918, CHB:1.0;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs10895694 chr11 104354790 Intron 7 20551 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10466649 chr11 104411945 Intron 7 77706 CEU:1.0;0.905, CHB:1.0;0.881, JPT:1.0;0.937 FUNCTIONAL_SNP rs7926936 chr11 104465910 Intron 7 131671 CEU:1.0;0.918, CHB:1.0;0.885, JPT:0.936;0.876 FUNCTIONAL_SNP rs7939484 chr11 104348130 Intron 7 13891 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10791716 chr11 104392750 Intron 7 58511 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11226404 chr11 104385669 Intron 7 51430 CEU:1.0;0.918, CHB:1.0;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs1386666 chr11 104339069 Intron 7 4830 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs931375 chr11 104383531 Intron 7 49292 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11226383 chr11 104355411 Intron 7 21172 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10750707 chr11 104386359 Intron 7 52120 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2220349 chr11 104412288 Intron 7 78049 CEU:1.0;0.918, CHB:1.0;0.885, JPT:1.0;0.937 FUNCTIONAL_SNP rs1487681 chr11 104387567 Intron 7 53328 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1487683 chr11 104388714 Intron 7 54475 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4754117 chr11 104368709 Intron 7 34470 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1565130 chr11 104388020 Intron 7 53781 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1565132 chr11 104388329 Intron 7 54090 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11226402 chr11 104385371 Intron 7 51132 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs994385 chr11 104343566 Intron 7 9327 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4573652 chr11 104376956 Intron 7 42717 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1487704 chr11 104380904 Intron 7 46665 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7114728 chr11 104369761 Intron 7 35522 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11226407 chr11 104388759 Intron 7 54520 CEU:1.0;0.918, CHB:1.0;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs7943789 chr11 104367507 Intron 7 33268 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2408942 chr11 104383714 Intron 7 49475 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10895701 chr11 104379660 Intron 7 45421 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10895959 chr11 106330162 Intergenic 5b ASSOCIATION 18821565 Inattentive symptoms 5.52287874528 AASDHPPT - GUCY1A2 FUNCTIONAL_SNP rs7110120 chr11 106322665 Intergenic 7 7497 CEU:1.0;0.848, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs10431058 chr11 107481518 Intron 7 ASSOCIATION 20585627 Common traits (Other) 6.09691001301 ELMOD1 FUNCTIONAL_SNP rs11212297 chr11 107475371 Intron 7 6147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.745 FUNCTIONAL_SNP rs1939895 chr11 107483469 Intron 7 1951 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10890742 chr11 107474795 Intron 7 6723 CEU:1.0;0.905, YRI:0.903;0.684 LEAD_SNP rs11212617 chr11 108283161 Intron 6 ASSOCIATION 21186350 Response to metformin 8.52287874528 C11orf65 FUNCTIONAL_SNP rs227092 chr11 108236783 Exon,non-coding 6 46378 CEU:1.0;0.92, CHB:0.935;0.643, JPT:1.0;0.907 FUNCTIONAL_SNP rs4585 chr11 108239628 Exon,non-coding 5b 43533 CEU:1.0;0.925, CHB:1.0;0.636, JPT:0.897;0.804 FUNCTIONAL_SNP rs228590 chr11 108096141 Intron 2a 187020 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs2118309 chr11 108367453 Intron 2b 84292 CEU:1.0;0.922, JPT:0.932;0.538 FUNCTIONAL_SNP rs592955 chr11 108156473 Intron 3b 126688 CEU:1.0;1.0, CHB:0.811;0.534, JPT:0.877;0.598 FUNCTIONAL_SNP rs652311 chr11 108240069 Intron 4 43092 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs228589 chr11 108093208 Intron 4 189953 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.824 FUNCTIONAL_SNP rs228591 chr11 108097333 Intron 4 185828 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.901 FUNCTIONAL_SNP rs228599 chr11 108107660 Intron 4 175501 CEU:1.0;1.0, CHB:1.0;0.663, JPT:1.0;0.907 FUNCTIONAL_SNP rs227072 chr11 108212093 Intron 4 71068 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs227073 chr11 108212692 Intron 4 70469 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907, YRI:1.0;0.642 FUNCTIONAL_SNP rs227058 chr11 108265213 Intron 5a 17948 CEU:1.0;1.0, CHB:1.0;0.735, JPT:1.0;0.907 FUNCTIONAL_SNP rs600931 chr11 108117335 Intron 5a 165826 CEU:1.0;1.0, CHB:0.935;0.642, JPT:1.0;0.907 FUNCTIONAL_SNP rs609655 chr11 108204253 Intron 5a 78908 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs573890 chr11 108251363 Intron 5a 31798 CEU:1.0;1.0, CHB:1.0;0.697, JPT:1.0;0.865 FUNCTIONAL_SNP rs227070 chr11 108211412 Intron 5a 71749 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs662578 chr11 108194557 Intron 5b 88604 CEU:1.0;1.0, CHB:1.0;0.693, JPT:1.0;0.907 FUNCTIONAL_SNP rs183460 chr11 108090710 Intron 5b 192451 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.824 FUNCTIONAL_SNP rs662218 chr11 108194528 Intron 5b 88633 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs228592 chr11 108123189 Intron 5b 159972 CEU:1.0;1.0, CHB:0.935;0.642, JPT:1.0;0.907 FUNCTIONAL_SNP rs227087 chr11 108244114 Intron 5b 39047 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs1583598 chr11 108305989 Intron 5b 22828 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs673281 chr11 108182069 Intron 6 101092 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs618499 chr11 108148839 Intron 6 134322 CEU:1.0;1.0, CHB:0.806;0.502, JPT:0.877;0.598 FUNCTIONAL_SNP rs599558 chr11 108177538 Intron 6 105623 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs7931930 chr11 108268286 Intron 6 14875 CEU:1.0;1.0, CHB:1.0;0.772, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9667658 chr11 108276091 Intron 6 7070 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs664143 chr11 108225661 Intron 6 57500 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs6589019 chr11 108324961 Intron 6 41800 CEU:1.0;1.0, CHB:1.0;0.729, JPT:1.0;0.859 FUNCTIONAL_SNP rs1003624 chr11 108152645 Intron 6 130516 CEU:1.0;1.0, CHB:0.795;0.505, JPT:0.848;0.562 FUNCTIONAL_SNP rs183459 chr11 108089197 Intron 6 193964 CEU:1.0;1.0, CHB:1.0;0.636, JPT:1.0;0.824 FUNCTIONAL_SNP rs654005 chr11 108155397 Intron 6 127764 CEU:1.0;1.0, CHB:0.811;0.534, JPT:0.877;0.598 FUNCTIONAL_SNP rs627418 chr11 108131225 Intron 6 151936 CEU:1.0;1.0, CHB:1.0;0.667, JPT:0.9;0.81 FUNCTIONAL_SNP rs227040 chr11 108223391 Intron 6 59770 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs227041 chr11 108222801 Intron 6 60360 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs624366 chr11 108154097 Intron 6 129064 CEU:1.0;1.0, CHB:0.811;0.534, JPT:0.879;0.629 FUNCTIONAL_SNP rs623860 chr11 108106782 Intron 6 176379 CEU:1.0;1.0, CHB:1.0;0.636, JPT:1.0;0.865 FUNCTIONAL_SNP rs652541 chr11 108226025 Intron 6 57136 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs227075 chr11 108218196 Intron 6 64965 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs227077 chr11 108253252 Intron 6 29909 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs609557 chr11 108084513 Intron 6 198648 CEU:1.0;0.962, CHB:1.0;0.667, JPT:1.0;0.824 FUNCTIONAL_SNP rs5023001 chr11 108335538 Intron 6 52377 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs172894 chr11 108262090 Intron 6 21071 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.786 FUNCTIONAL_SNP rs172896 chr11 108217049 Intron 6 66112 CEU:1.0;1.0, CHB:1.0;0.693, JPT:1.0;0.907 FUNCTIONAL_SNP rs645485 chr11 108168863 Intron 6 114298 CEU:1.0;1.0, CHB:0.811;0.534, JPT:0.877;0.598 FUNCTIONAL_SNP rs3765632 chr11 108353018 Intron 6 69857 CEU:1.0;1.0, JPT:1.0;0.649 FUNCTIONAL_SNP rs227053 chr11 108226855 Intron 6 56306 CEU:1.0;1.0 FUNCTIONAL_SNP rs419716 chr11 108221099 Intron 6 62062 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs672655 chr11 108129657 Intron 6 153504 CEU:1.0;1.0, CHB:1.0;0.735, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs620613 chr11 108185478 Intron 6 97683 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907, YRI:1.0;0.642 FUNCTIONAL_SNP rs227055 chr11 108261261 Intron 6 21900 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs660429 chr11 108181511 Intron 6 101650 CEU:1.0;1.0 FUNCTIONAL_SNP rs609261 chr11 108158134 Intron 6 125027 CEU:1.0;1.0, CHB:0.811;0.534, JPT:0.877;0.598 FUNCTIONAL_SNP rs2356801 chr11 108281999 Intron 7 1162 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs425538 chr11 108219339 Intron 7 63822 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs641605 chr11 108101919 Intron 7 181242 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs4987982 chr11 108151269 Intron 7 131892 CEU:1.0;1.0, CHB:0.806;0.502, JPT:0.877;0.598 FUNCTIONAL_SNP rs10890834 chr11 108286443 Intron 7 3282 CEU:1.0;0.962, CHB:1.0;0.732, JPT:1.0;0.907 FUNCTIONAL_SNP rs664677 chr11 108143182 Intron 7 139979 CEU:1.0;1.0, CHB:0.806;0.502, JPT:0.877;0.598 FUNCTIONAL_SNP rs694376 chr11 108119048 Intron 7 164113 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs599164 chr11 108120439 Intron 7 162722 CEU:1.0;1.0, CHB:0.933;0.609, JPT:1.0;0.907 FUNCTIONAL_SNP rs374443 chr11 108221665 Intron 7 61496 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs186595 chr11 108251211 Intron 7 31950 CEU:1.0;1.0, CHB:1.0;0.697, JPT:1.0;0.907 FUNCTIONAL_SNP rs227061 chr11 108205329 Intron 7 77832 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs227062 chr11 108205383 Intron 7 77778 CEU:1.0;1.0, CHB:1.0;0.655, JPT:1.0;0.906 FUNCTIONAL_SNP rs227064 chr11 108207393 Intron 7 75768 CEU:1.0;1.0, CHB:1.0;0.667, JPT:1.0;0.907 FUNCTIONAL_SNP rs227068 chr11 108210109 Intron 7 73052 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs227074 chr11 108215095 Intron 7 68066 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs10789659 chr11 108255828 Intron 7 27333 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;0.907 FUNCTIONAL_SNP rs595747 chr11 108194073 Intron 7 89088 CEU:1.0;1.0, CHB:1.0;0.636, JPT:1.0;0.907 FUNCTIONAL_SNP rs113995 chr11 108256837 Intron 7 26324 CEU:1.0;1.0, CHB:1.0;0.693, JPT:1.0;0.907 FUNCTIONAL_SNP rs599406 chr11 108118234 Intron 7 164927 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.907 FUNCTIONAL_SNP rs7942014 chr11 108326174 Intron 7 43013 CEU:1.0;1.0, CHB:1.0;0.7, JPT:1.0;0.865 FUNCTIONAL_SNP rs4754324 chr11 108325448 Intron 7 42287 CEU:1.0;1.0 FUNCTIONAL_SNP rs3901851 chr11 108352335 Intron 7 69174 CEU:1.0;1.0 FUNCTIONAL_SNP rs619972 chr11 108169619 Intron 7 113542 CEU:1.0;1.0, CHB:0.81;0.532, JPT:1.0;0.7, YRI:1.0;0.675 LEAD_SNP rs746463 chr11 109995944 Intron 6 ASSOCIATION 17903301 Exercise treadmill test traits 5.30102999566 ZC3H12C FUNCTIONAL_SNP rs601154 chr11 109996706 Intron 4 762 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs616436 chr11 109996646 Intron 4 702 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs644996 chr11 109994794 Intron 5a 1150 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs626461 chr11 109994838 Intron 5a 1106 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs615947 chr11 109996773 Intron 5b 829 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs588313 chr11 109998804 Intron 5b 2860 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs630839 chr11 109995704 Intron 5b 240 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1789369 chr11 109995287 Intron 5b 657 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4554858 chr11 109971229 Intron 5b 24715 CEU:1.0;0.946, CHB:1.0;0.915, JPT:1.0;1.0, YRI:0.95;0.86 FUNCTIONAL_SNP rs7119100 chr11 109990636 Intron 5b 5308 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs583763 chr11 109992727 Intron 6 3217 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2187390 chr11 109975655 Intron 6 20289 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.86 FUNCTIONAL_SNP rs10749953 chr11 109979575 Intron 7 16369 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.86 FUNCTIONAL_SNP rs587027 chr11 109998521 Intron 7 2577 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2156583 chr11 109981606 Intron 7 14338 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.86 FUNCTIONAL_SNP rs10789749 chr11 109977178 Intron 7 18766 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.837 FUNCTIONAL_SNP rs1675979 chr11 109991510 Intron 7 4434 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs612320 chr11 109989972 Intron 7 5972 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4754421 chr11 109987884 Intron 7 8060 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10789751 chr11 109979717 Intron 7 16227 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.819 FUNCTIONAL_SNP rs10789752 chr11 109979945 Intron 7 15999 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;0.846, YRI:0.95;0.86 LEAD_SNP rs3802842 chr11 111171709 Intron 5b ASSOCIATION 18372901 Colorectal cancer 9.22184874962 C11orf93;C11orf92 FUNCTIONAL_SNP rs12296076 chr11 111166504 Exon,non-coding 5b 5205 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.814 FUNCTIONAL_SNP rs6589218 chr11 111167557 Exon,non-coding 5b 4152 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs6589220 chr11 111173290 Intron 5b 1581 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3802840 chr11 111171646 Intron 5b 63 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4477469 chr11 111160753 Intergenic 7 10956 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:0.957;0.812 LEAD_SNP rs1834481 chr11 112023827 Intron 5b ASSOCIATION 20150558 Interleukin-18 levels 8.0 IL18 FUNCTIONAL_SNP rs5744258 chr11 112021767 Exon,non-coding 7 2060 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5744222 chr11 112037014 Intron 4 13187 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5744256 chr11 112022848 Intron 5b 979 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12420140 chr11 112071294 Intron 5b 47467 CEU:1.0;0.838 FUNCTIONAL_SNP rs7121554 chr11 112048051 Intron 5b 24224 CEU:1.0;0.859, CHB:1.0;1.0 FUNCTIONAL_SNP rs12796114 chr11 112049140 Intron 6 25313 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs7131094 chr11 112044917 Intron 7 21090 CEU:1.0;0.938, CHB:1.0;1.0 FUNCTIONAL_SNP rs5744276 chr11 112016871 Intron 7 6956 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12797880 chr11 112049191 Intron 7 25364 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs2115763 chr11 112051169 Intron 7 ASSOCIATION 20150558 Interleukin-18 levels 8.39794000867 BCO2 FUNCTIONAL_SNP rs2518356 chr11 112082493 Intron 4 31324 CEU:0.952;0.865, CHB:0.894;0.8, JPT:0.873;0.718 FUNCTIONAL_SNP rs10891334 chr11 112057100 Intron 5b 5931 CEU:0.961;0.888, CHB:0.95;0.86, JPT:0.898;0.735 FUNCTIONAL_SNP rs7106524 chr11 112033636 Intron 5b 17533 CEU:1.0;0.885, CHB:0.901;0.811, JPT:0.9;0.81 FUNCTIONAL_SNP rs7123686 chr11 112065483 Intron 5b 14314 CEU:0.958;0.881, CHB:0.898;0.768, JPT:0.893;0.723 FUNCTIONAL_SNP rs10891329 chr11 112009892 Intron 6 41277 CEU:0.913;0.8, CHB:0.901;0.811, JPT:0.769;0.512 FUNCTIONAL_SNP rs10789863 chr11 112077378 Intron 6 26209 CEU:0.959;0.883, CHB:0.9;0.771, JPT:0.898;0.734 FUNCTIONAL_SNP rs5744280 chr11 112016514 Intron 7 34655 CEU:0.915;0.804, CHB:0.901;0.811, JPT:0.893;0.723 FUNCTIONAL_SNP rs2043055 chr11 112031624 Intron 7 19545 CEU:1.0;0.885, CHB:0.901;0.811, JPT:0.939;0.661 FUNCTIONAL_SNP rs4935984 chr11 112072930 Intron 7 21761 CEU:0.958;0.881, CHB:0.898;0.768, JPT:0.89;0.718 FUNCTIONAL_SNP rs1972421 chr11 112078120 Intron 7 26951 CEU:0.961;0.888, CHB:0.947;0.813, JPT:0.895;0.729 FUNCTIONAL_SNP rs4937176 chr11 112068973 Intron 7 17804 CEU:0.961;0.888, CHB:0.901;0.775, JPT:0.895;0.729 LEAD_SNP rs2250417 chr11 112085316 Intron 5b ASSOCIATION 18464913 Protein quantitative trait loci 12.15490196 BCO2 FUNCTIONAL_SNP rs10891343 chr11 112080384 Intron 7 4932 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.893 LEAD_SNP rs7105881 chr11 112456221 Intergenic 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.52287874528 RPL23AP62 - NCAM1 FUNCTIONAL_SNP rs10749999 chr11 112394430 Intron 2b 61791 CEU:0.955;0.873 FUNCTIONAL_SNP rs1945120 chr11 112417320 Intron 3a 38901 CEU:1.0;1.0, CHB:0.948;0.855, JPT:0.936;0.678 FUNCTIONAL_SNP rs7109000 chr11 112435333 Intergenic 4 20888 CEU:0.955;0.804, CHB:0.943;0.732, JPT:1.0;0.62 FUNCTIONAL_SNP rs10891380 chr11 112397104 Intron 4 59117 CEU:1.0;0.958, CHB:0.831;0.624, JPT:0.939;0.662 FUNCTIONAL_SNP rs7101495 chr11 112396795 Intron 4 59426 CEU:1.0;0.957, CHB:0.831;0.624, JPT:0.939;0.662 FUNCTIONAL_SNP rs7124639 chr11 112450073 Intergenic 4 6148 CEU:1.0;0.958, CHB:1.0;0.951, JPT:1.0;1.0, YRI:0.951;0.576 FUNCTIONAL_SNP rs10750000 chr11 112395318 Intron 5a 60903 CEU:1.0;0.957, CHB:0.831;0.655, JPT:0.932;0.639 FUNCTIONAL_SNP rs7125827 chr11 112398446 Intron 5b 57775 CEU:1.0;0.958, CHB:0.831;0.624, JPT:0.939;0.662 FUNCTIONAL_SNP rs7121746 chr11 112437007 Intergenic 5b 19214 CEU:1.0;0.957, CHB:0.948;0.855, JPT:1.0;0.826 FUNCTIONAL_SNP rs7952251 chr11 112433438 Intergenic 6 22783 CEU:1.0;0.825 FUNCTIONAL_SNP rs7111561 chr11 112424128 Intron 7 32093 CEU:1.0;0.958, CHB:0.948;0.855, JPT:0.939;0.662 FUNCTIONAL_SNP rs7928088 chr11 112418431 Intron 7 37790 CEU:1.0;0.958, CHB:0.883;0.67, JPT:0.939;0.662 FUNCTIONAL_SNP rs1945114 chr11 112402907 Intron 7 53314 CEU:1.0;0.958, CHB:0.948;0.855, JPT:0.939;0.662 FUNCTIONAL_SNP rs7119817 chr11 112455924 Intergenic 7 297 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7108821 chr11 112456462 Intergenic 7 241 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7105119 chr11 112427367 Intergenic 7 28854 CEU:1.0;0.958, CHB:0.948;0.855, JPT:0.939;0.662 FUNCTIONAL_SNP rs7947242 chr11 112407771 Intron 7 48450 CEU:1.0;0.958, CHB:0.883;0.67, JPT:0.939;0.662 FUNCTIONAL_SNP rs6589303 chr11 112428108 Intergenic 7 28113 CEU:1.0;0.958, CHB:0.883;0.67, JPT:0.939;0.662 LEAD_SNP rs1436109 chr11 112991618 Intron 7 ASSOCIATION 21212386 Left ventricular mass 8.39794000867 NCAM1 ASSOCIATION 21212386 Left ventricular mass 6.04575749056 NCAM1 ASSOCIATION 21212386 Left ventricular mass 6.52287874528 NCAM1 FUNCTIONAL_SNP rs2155289 chr11 112885081 Intron 2b 106537 CEU:0.905;0.82 FUNCTIONAL_SNP rs750350 chr11 112885342 Intron 4 106276 CEU:0.897;0.805 FUNCTIONAL_SNP rs11214523 chr11 113034374 Intron 4 42756 CEU:1.0;0.913, JPT:1.0;0.555 FUNCTIONAL_SNP rs10891511 chr11 113009718 Intron 4 18100 CEU:1.0;0.913, JPT:1.0;0.54 FUNCTIONAL_SNP rs1940717 chr11 112859894 Intron 5a 131724 CEU:0.905;0.82, CHB:0.885;0.784, JPT:0.909;0.702 FUNCTIONAL_SNP rs10502161 chr11 112843425 Intron 5b 148193 CEU:0.905;0.82, CHB:0.885;0.784, JPT:0.909;0.702 FUNCTIONAL_SNP rs10502170 chr11 113040118 Intron 5b 48500 CEU:1.0;0.838 FUNCTIONAL_SNP rs11214508 chr11 112998484 Intron 5b 6866 CEU:1.0;0.913, JPT:1.0;0.768 FUNCTIONAL_SNP rs11214511 chr11 113008772 Intron 5b 17154 CEU:1.0;0.913, JPT:1.0;0.525 FUNCTIONAL_SNP rs11214531 chr11 113047583 Intron 5b 55965 CEU:1.0;0.913, JPT:1.0;0.555 FUNCTIONAL_SNP rs11214533 chr11 113048466 Intron 5b 56848 CEU:1.0;0.838, JPT:1.0;0.555 FUNCTIONAL_SNP rs17114718 chr11 112905589 Intron 5b 86029 CEU:1.0;0.913, CHB:0.885;0.784, JPT:0.909;0.702 FUNCTIONAL_SNP rs13328864 chr11 112843410 Intron 5b 148208 CEU:0.905;0.82, CHB:0.885;0.784, JPT:0.909;0.702 FUNCTIONAL_SNP rs10891515 chr11 113017470 Intron 5b 25852 CEU:1.0;0.913, JPT:1.0;0.555 FUNCTIONAL_SNP rs12099332 chr11 112847712 Intron 6 143906 CEU:0.905;0.82, CHB:0.885;0.784, JPT:0.903;0.686 FUNCTIONAL_SNP rs17114689 chr11 112894450 Intron 6 97168 CEU:0.905;0.82, CHB:0.885;0.784, JPT:0.909;0.702 FUNCTIONAL_SNP rs10502164 chr11 112907421 Intron 6 84197 CEU:1.0;0.913, CHB:0.885;0.784, JPT:0.909;0.702 FUNCTIONAL_SNP rs17114646 chr11 112854075 Intron 6 137543 CEU:0.898;0.806, CHB:0.885;0.784, JPT:0.909;0.702 FUNCTIONAL_SNP rs2155291 chr11 112851369 Intron 6 140249 CEU:0.905;0.819, CHB:0.885;0.784, JPT:0.909;0.702 FUNCTIONAL_SNP rs7112370 chr11 113014058 Intron 6 22440 CEU:1.0;0.913, JPT:1.0;0.555 FUNCTIONAL_SNP rs17114705 chr11 112899832 Intron 6 91786 CEU:0.905;0.82 FUNCTIONAL_SNP rs9651679 chr11 113023162 Intron 6 31544 CEU:1.0;0.906, JPT:1.0;0.564 FUNCTIONAL_SNP rs7128705 chr11 112858917 Intron 7 132701 CEU:0.905;0.819, CHB:0.885;0.784, JPT:0.909;0.702 FUNCTIONAL_SNP rs17114757 chr11 112951637 Intron 7 39981 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12288908 chr11 112898995 Intron 7 92623 CEU:0.905;0.819 FUNCTIONAL_SNP rs17582738 chr11 112840745 Intron 7 150873 CEU:0.905;0.82 FUNCTIONAL_SNP rs2155287 chr11 112847206 Intron 7 144412 CEU:0.905;0.82, CHB:0.885;0.784, JPT:0.909;0.702 FUNCTIONAL_SNP rs2155293 chr11 112901094 Intron 7 90524 CEU:0.905;0.82 FUNCTIONAL_SNP rs11214512 chr11 113009421 Intron 7 17803 CEU:1.0;0.913, JPT:1.0;0.553 FUNCTIONAL_SNP rs17114801 chr11 112963439 Intron 7 28179 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11214518 chr11 113025146 Intron 7 33528 CEU:1.0;0.913, JPT:1.0;0.555 FUNCTIONAL_SNP rs4366519 chr11 113020582 Intron 7 28964 CEU:1.0;0.913, JPT:1.0;0.555 FUNCTIONAL_SNP rs11214520 chr11 113027945 Intron 7 36327 CEU:1.0;0.913, JPT:1.0;0.622 FUNCTIONAL_SNP rs4143165 chr11 113040818 Intron 7 49200 CEU:1.0;0.838 FUNCTIONAL_SNP rs17114687 chr11 112889357 Intron 7 102261 CEU:0.905;0.819, CHB:1.0;0.888, JPT:0.907;0.697 FUNCTIONAL_SNP rs7129926 chr11 112862901 Intron 7 128717 CEU:0.905;0.82 FUNCTIONAL_SNP rs4936265 chr11 113038005 Intron 7 46387 CEU:1.0;0.838 FUNCTIONAL_SNP rs17114702 chr11 112899735 Intron 7 91883 CEU:0.905;0.82 FUNCTIONAL_SNP rs17114821 chr11 112967822 Intron 7 23796 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10502168 chr11 112995432 Intron 7 3814 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7110628 chr11 112842988 Intron 7 148630 CEU:0.905;0.82, CHB:1.0;0.811, JPT:0.909;0.702 FUNCTIONAL_SNP rs10891493 chr11 112909871 Intron 7 81747 CEU:1.0;0.899 FUNCTIONAL_SNP rs17114685 chr11 112889330 Intron 7 102288 CEU:0.905;0.82, CHB:0.885;0.784, JPT:0.909;0.702 FUNCTIONAL_SNP rs2011507 chr11 112988280 Intron 7 3338 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10502169 chr11 113018408 Intron 7 26790 CEU:1.0;0.913, JPT:1.0;0.555 FUNCTIONAL_SNP rs4595575 chr11 113036501 Intron 7 44883 CEU:1.0;0.838 FUNCTIONAL_SNP rs4595579 chr11 112878995 Intron 7 112623 CEU:0.905;0.82 FUNCTIONAL_SNP rs10891517 chr11 113017850 Intron 7 26232 CEU:1.0;0.912, JPT:1.0;0.581 LEAD_SNP rs12279261 chr11 113106455 Intron 7 ASSOCIATION 21116278 Entorhinal cortical thickness 5.04575749056 NCAM1 LEAD_SNP rs1079596 chr11 113296619 Intron 7 ASSOCIATION 17903293 Select biomarker traits 5.52287874528 DRD2 FUNCTIONAL_SNP rs1079597 chr11 113296286 Intron 5b 333 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs1125394 chr11 113297185 Intron 7 566 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11214606 chr11 113309869 Intron 7 ASSOCIATION 21107309 Working memory 6.30102999566 DRD2 LEAD_SNP rs17116334 chr11 113961762 Intron 6 ASSOCIATION 18846501 Conduct disorder (interaction) 5.04575749056 ZBTB16 LEAD_SNP rs2847476 chr11 114191016 Intron 7 ASSOCIATION 17903297 Volumetric brain MRI 5.52287874528 NNMT - C11orf71 LEAD_SNP rs678170 chr11 114431956 Intergenic 5a ASSOCIATION 21297633 Ulcerative colitis 13.3010299957 FAM55A FUNCTIONAL_SNP rs524911 chr11 114401577 Coding 7 30379 CEU:1.0;0.91, CHB:1.0;0.903, JPT:1.0;0.951 FUNCTIONAL_SNP rs10891692 chr11 114393652 Coding 5b 38304 CEU:1.0;0.954, CHB:1.0;0.95, JPT:1.0;0.952 FUNCTIONAL_SNP rs10891705 chr11 114441943 Coding 7 9987 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11600618 chr11 114432070 Intergenic 4 114 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.593 FUNCTIONAL_SNP rs661946 chr11 114430609 Intergenic 4 1347 CEU:1.0;0.954, CHB:1.0;0.95, JPT:1.0;0.952, YRI:0.944;0.522 FUNCTIONAL_SNP rs11215037 chr11 114403674 Intron 5b 28282 CEU:0.954;0.909, CHB:1.0;0.946, JPT:1.0;0.952 FUNCTIONAL_SNP rs7117324 chr11 114387956 Intergenic 6 44000 CEU:1.0;0.954, CHB:1.0;0.95, JPT:0.95;0.903 FUNCTIONAL_SNP rs561722 chr11 114386830 Intergenic 6 45126 CEU:1.0;0.954, CHB:1.0;0.95, JPT:1.0;0.952 FUNCTIONAL_SNP rs560174 chr11 114431554 Intergenic 7 402 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;0.639 FUNCTIONAL_SNP rs511590 chr11 114441248 Intergenic 7 9292 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs513152 chr11 114441123 Intergenic 7 9167 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10790025 chr11 114439662 Intergenic 7 7706 CEU:1.0;0.863, JPT:1.0;0.648 FUNCTIONAL_SNP rs494754 chr11 114402572 Intron 7 29384 CEU:0.944;0.891, CHB:1.0;0.948, JPT:1.0;0.95 FUNCTIONAL_SNP rs2045241 chr11 114428783 Intron 7 3173 CEU:1.0;0.953, CHB:1.0;0.95, JPT:1.0;0.952 FUNCTIONAL_SNP rs534912 chr11 114413446 Intron 7 18510 CEU:1.0;0.954, CHB:1.0;0.95, JPT:1.0;0.952 LEAD_SNP rs1712790 chr11 114621469 Intergenic 7 ASSOCIATION 17903292 Urinary albumin excretion 5.69897000434 FAM55B - CADM1 FUNCTIONAL_SNP rs1712789 chr11 114620709 Intergenic 5a 760 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10790034 chr11 114629890 Intergenic 5b 8421 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs1517700 chr11 114621985 Intergenic 7 516 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10891744 chr11 114630067 Intergenic 7 8598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs638882 chr11 115764045 Intergenic 7 ASSOCIATION 17903296 Hip geometry 5.39794000867 FTLP7 - RPL15P15 LEAD_SNP rs490592 chr11 116298367 Intergenic 4 ASSOCIATION 20171287 Brain structure 6.0 RPL15P15 - BUD13 LEAD_SNP rs1240773 chr11 116520527 Intron 7 ASSOCIATION 21160409 HIV-1 susceptibility 5.09691001301 RPL15P15 - BUD13 LEAD_SNP rs4938303 chr11 116584987 Intergenic 7 ASSOCIATION 20864672 Triglycerides 20.3979400087 RPL15P15 - BUD13 FUNCTIONAL_SNP rs12799766 chr11 116558427 Intergenic 4 26560 CEU:0.934;0.819 FUNCTIONAL_SNP rs17092642 chr11 116557248 Intergenic 5a 27739 CEU:0.935;0.821 FUNCTIONAL_SNP rs11826999 chr11 116553778 Intergenic 7 31209 CEU:0.935;0.822 FUNCTIONAL_SNP rs12805061 chr11 116553025 Intergenic 7 31962 CEU:0.934;0.819 LEAD_SNP rs7350481 chr11 116586283 Intergenic 4 ASSOCIATION 20139978 Hematological and biochemical traits 49.0 RPL15P15 - BUD13 LEAD_SNP rs180358 chr11 116599392 Intergenic 5b ASSOCIATION 19010793 Multiple sclerosis (severity) 5.22184874962 RPL15P15 - BUD13 LEAD_SNP rs12272004 chr11 116603724 Intergenic 4 ASSOCIATION 19185284 Plasma carotenoid and tocopherol levels 9.09691001301 RPL15P15 - BUD13 ASSOCIATION 19060911 Cholesterol, total 6.15490195999 RPL15P15 - BUD13 ASSOCIATION 19060911 LDL cholesterol 12.3010299957 RPL15P15 - BUD13 ASSOCIATION 19060911 Triglycerides 12.3010299957 RPL15P15 - BUD13 LEAD_SNP rs1558861 chr11 116607437 Intergenic 5b ASSOCIATION 20864672 LDL cholesterol 5.69897000434 RPL15P15 - BUD13 ASSOCIATION 18193046 Triglycerides 25.6989700043 RPL15P15 - BUD13 LEAD_SNP rs12280753 chr11 116613660 Intergenic 4 ASSOCIATION 20838585 Cardiovascular disease risk factors 5.09691001301 RPL15P15 - BUD13 FUNCTIONAL_SNP rs28927680 chr11 116619073 Exon,non-coding 7 5413 CEU:1.0;0.866, YRI:1.0;0.563 FUNCTIONAL_SNP rs11823543 chr11 116649135 Exon,non-coding 7 35475 CEU:1.0;0.866, YRI:1.0;0.674 FUNCTIONAL_SNP rs12292921 chr11 116621963 Intron 4 8303 CEU:1.0;0.866, YRI:1.0;0.601 FUNCTIONAL_SNP rs17120029 chr11 116650118 Intron 6 36458 CEU:1.0;0.866, YRI:1.0;0.674 FUNCTIONAL_SNP rs12286037 chr11 116652207 Intron 7 38547 CEU:1.0;0.866, YRI:1.0;0.674 LEAD_SNP rs28927680 chr11 116619073 Exon,non-coding 7 ASSOCIATION 18193044 Triglycerides 16.6989700043 BUD13 LEAD_SNP rs11825181 chr11 116626258 Intron 7 ASSOCIATION 21386085 Triglycerides-Blood Pressure (TG-BP) 8.52287874528 BUD13 FUNCTIONAL_SNP rs11820589 chr11 116633862 Coding 7 7604 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs28927680 chr11 116619073 Exon,non-coding 7 7185 CEU:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs11823543 chr11 116649135 Exon,non-coding 7 22877 CEU:1.0;1.0, YRI:0.775;0.525 FUNCTIONAL_SNP rs10466589 chr11 116611985 Intergenic 3b 14273 CEU:1.0;1.0, YRI:1.0;0.684 FUNCTIONAL_SNP rs12272004 chr11 116603724 Intergenic 4 22534 CEU:1.0;1.0, YRI:0.919;0.728 FUNCTIONAL_SNP rs12292921 chr11 116621963 Intron 4 4295 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11216103 chr11 116574488 Intergenic 4 51770 CEU:1.0;1.0 FUNCTIONAL_SNP rs10488699 chr11 116632500 Intron 5a 6242 CEU:1.0;1.0, YRI:0.929;0.863 FUNCTIONAL_SNP rs12285095 chr11 116658031 Intron 5b 31773 CEU:1.0;1.0 FUNCTIONAL_SNP rs12279373 chr11 116600400 Intergenic 5b 25858 CEU:1.0;1.0, YRI:0.919;0.728 FUNCTIONAL_SNP rs1892948 chr11 116572089 Intergenic 5b 54169 CEU:1.0;1.0 FUNCTIONAL_SNP rs17120029 chr11 116650118 Intron 6 23860 CEU:1.0;1.0, YRI:0.775;0.525 FUNCTIONAL_SNP rs12294259 chr11 116637146 Intron 6 10888 CEU:1.0;1.0, YRI:0.924;0.699 FUNCTIONAL_SNP rs17119878 chr11 116531479 Intergenic 7 94779 CEU:1.0;1.0 FUNCTIONAL_SNP rs7952043 chr11 116552562 Intergenic 7 73696 CEU:1.0;1.0 FUNCTIONAL_SNP rs12286037 chr11 116652207 Intron 7 25949 CEU:1.0;1.0, YRI:0.775;0.525 FUNCTIONAL_SNP rs12280724 chr11 116613423 Intergenic 7 12835 CEU:1.0;1.0, YRI:1.0;0.687 LEAD_SNP rs11820589 chr11 116633862 Coding 7 ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 8.22184874962 BUD13 FUNCTIONAL_SNP rs28927680 chr11 116619073 Exon,non-coding 7 14789 CEU:1.0;0.825, YRI:1.0;0.941 FUNCTIONAL_SNP rs11823543 chr11 116649135 Exon,non-coding 7 15273 CEU:1.0;0.825, YRI:0.814;0.591 FUNCTIONAL_SNP rs10466589 chr11 116611985 Intergenic 3b 21877 CEU:1.0;1.0, YRI:1.0;0.717 FUNCTIONAL_SNP rs12272004 chr11 116603724 Intergenic 4 30138 CEU:1.0;1.0, YRI:0.93;0.717 FUNCTIONAL_SNP rs12292921 chr11 116621963 Intron 4 11899 CEU:1.0;0.825, YRI:1.0;1.0 FUNCTIONAL_SNP rs11216103 chr11 116574488 Intergenic 4 59374 CEU:1.0;1.0 FUNCTIONAL_SNP rs10488699 chr11 116632500 Intron 5a 1362 CEU:1.0;1.0, YRI:0.941;0.885 FUNCTIONAL_SNP rs12279373 chr11 116600400 Intergenic 5b 33462 CEU:1.0;1.0, YRI:0.93;0.717 FUNCTIONAL_SNP rs1892948 chr11 116572089 Intergenic 5b 61773 CEU:1.0;1.0 FUNCTIONAL_SNP rs12294259 chr11 116637146 Intron 6 3284 CEU:1.0;1.0, YRI:0.937;0.741 FUNCTIONAL_SNP rs17120029 chr11 116650118 Intron 6 16256 CEU:1.0;0.825, YRI:0.814;0.591 FUNCTIONAL_SNP rs17119878 chr11 116531479 Intergenic 7 102383 CEU:1.0;0.825 FUNCTIONAL_SNP rs7952043 chr11 116552562 Intergenic 7 81300 CEU:1.0;1.0 FUNCTIONAL_SNP rs11825181 chr11 116626258 Intron 7 7604 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12286037 chr11 116652207 Intron 7 18345 CEU:1.0;0.825, YRI:0.814;0.591 FUNCTIONAL_SNP rs12280724 chr11 116613423 Intergenic 7 20439 CEU:1.0;1.0, YRI:1.0;0.724 LEAD_SNP rs10790162 chr11 116639104 Intron 7 ASSOCIATION 21386085 HDL Cholesterol - Triglycerides (HDLC-TG) 14.5228787453 BUD13 ASSOCIATION 21386085 Metabolic syndrome 8.30102999566 BUD13 ASSOCIATION 21386085 Waist Circumference - Triglycerides (WC-TG) 15.15490196 BUD13 FUNCTIONAL_SNP rs2266788 chr11 116660686 Exon,non-coding 5b 21582 CEU:1.0;0.825, CHB:1.0;0.938, JPT:1.0;0.937 FUNCTIONAL_SNP rs7350481 chr11 116586283 Intergenic 4 52821 CEU:1.0;0.825, CHB:0.857;0.648, JPT:0.787;0.58 FUNCTIONAL_SNP rs2160669 chr11 116647607 Intergenic 5a 8503 CEU:1.0;1.0, CHB:0.937;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs9326246 chr11 116611733 Intergenic 5a 27371 CEU:1.0;1.0, CHB:1.0;0.93, JPT:1.0;1.0 FUNCTIONAL_SNP rs6589566 chr11 116652423 Intron 6 13319 CEU:1.0;1.0, CHB:1.0;0.938, JPT:0.932;0.869 FUNCTIONAL_SNP rs3825041 chr11 116631707 Intron 7 7397 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939 FUNCTIONAL_SNP rs2075290 chr11 116653296 Intron 7 14192 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;0.94 FUNCTIONAL_SNP rs7930786 chr11 116624727 Intron 7 14377 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;0.942 FUNCTIONAL_SNP rs6589564 chr11 116624153 Intron 7 14951 CEU:1.0;1.0, CHB:1.0;0.939, JPT:1.0;0.837 FUNCTIONAL_SNP rs6589565 chr11 116640237 Intron 7 1133 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs964184 chr11 116648917 Exon,non-coding 5b ASSOCIATION 21729881 Vitamin E levels 11.096910013 ZNF259 ASSOCIATION 21378990 Coronary heart disease 17.0 ZNF259 ASSOCIATION 20864672 HDL cholesterol 10.6989700043 ZNF259 ASSOCIATION 20657596 Hypertriglyceridemia 23.3010299957 ZNF259 ASSOCIATION 19060906 HDL cholesterol 12.0 ZNF259 ASSOCIATION 19060906 Triglycerides 61.3979400087 ZNF259 LEAD_SNP rs11823543 chr11 116649135 Exon,non-coding 7 ASSOCIATION 21386085 Triglycerides-Blood Pressure (TG-BP) 8.52287874528 ZNF259 FUNCTIONAL_SNP rs11820589 chr11 116633862 Coding 7 15273 CEU:1.0;0.825, YRI:0.814;0.591 FUNCTIONAL_SNP rs28927680 chr11 116619073 Exon,non-coding 7 30062 CEU:1.0;1.0, YRI:0.869;0.634 FUNCTIONAL_SNP rs10466589 chr11 116611985 Intergenic 3b 37150 CEU:1.0;0.848, YRI:1.0;0.813 FUNCTIONAL_SNP rs12272004 chr11 116603724 Intergenic 4 45411 CEU:1.0;0.848, YRI:0.857;0.543 FUNCTIONAL_SNP rs12280753 chr11 116613660 Intergenic 4 35475 CEU:1.0;0.866, YRI:1.0;0.674 FUNCTIONAL_SNP rs12292921 chr11 116621963 Intron 4 27172 CEU:1.0;1.0, YRI:0.816;0.594 FUNCTIONAL_SNP rs10488699 chr11 116632500 Intron 5a 16635 CEU:1.0;0.848, YRI:0.816;0.594 FUNCTIONAL_SNP rs12285095 chr11 116658031 Intron 5b 8896 CEU:1.0;0.866 FUNCTIONAL_SNP rs12279373 chr11 116600400 Intergenic 5b 48735 CEU:1.0;0.848, YRI:0.857;0.543 FUNCTIONAL_SNP rs1892948 chr11 116572089 Intergenic 5b 77046 CEU:1.0;0.848 FUNCTIONAL_SNP rs17120029 chr11 116650118 Intron 6 983 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17119878 chr11 116531479 Intergenic 7 117656 CEU:1.0;0.848 FUNCTIONAL_SNP rs12280724 chr11 116613423 Intergenic 7 35712 CEU:1.0;0.848, YRI:1.0;0.813 FUNCTIONAL_SNP rs11825181 chr11 116626258 Intron 7 22877 CEU:1.0;1.0, YRI:0.775;0.525 FUNCTIONAL_SNP rs12286037 chr11 116652207 Intron 7 3072 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12286037 chr11 116652207 Intron 7 ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 8.0 ZNF259 ASSOCIATION 20442857 Lipoprotein-associated phospholipase A2 activity and mass 7.39794000867 ZNF259 ASSOCIATION 18193043 Triglycerides 26.0 ZNF259 FUNCTIONAL_SNP rs11820589 chr11 116633862 Coding 7 18345 CEU:1.0;0.825, YRI:0.814;0.591 FUNCTIONAL_SNP rs11823543 chr11 116649135 Exon,non-coding 7 3072 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs28927680 chr11 116619073 Exon,non-coding 7 33134 CEU:1.0;1.0, YRI:0.869;0.634 FUNCTIONAL_SNP rs10466589 chr11 116611985 Intergenic 3b 40222 CEU:1.0;0.848, YRI:1.0;0.813 FUNCTIONAL_SNP rs12272004 chr11 116603724 Intergenic 4 48483 CEU:1.0;0.848, YRI:0.857;0.543 FUNCTIONAL_SNP rs12280753 chr11 116613660 Intergenic 4 38547 CEU:1.0;0.866, YRI:1.0;0.674 FUNCTIONAL_SNP rs12292921 chr11 116621963 Intron 4 30244 CEU:1.0;1.0, YRI:0.816;0.594 FUNCTIONAL_SNP rs10488699 chr11 116632500 Intron 5a 19707 CEU:1.0;0.848, YRI:0.816;0.594 FUNCTIONAL_SNP rs12285095 chr11 116658031 Intron 5b 5824 CEU:1.0;0.866 FUNCTIONAL_SNP rs12279373 chr11 116600400 Intergenic 5b 51807 CEU:1.0;0.848, YRI:0.857;0.543 FUNCTIONAL_SNP rs1892948 chr11 116572089 Intergenic 5b 80118 CEU:1.0;0.848 FUNCTIONAL_SNP rs17120029 chr11 116650118 Intron 6 2089 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17119878 chr11 116531479 Intergenic 7 120728 CEU:1.0;0.848 FUNCTIONAL_SNP rs12280724 chr11 116613423 Intergenic 7 38784 CEU:1.0;0.848, YRI:1.0;0.813 FUNCTIONAL_SNP rs11825181 chr11 116626258 Intron 7 25949 CEU:1.0;1.0, YRI:0.775;0.525 LEAD_SNP rs6589566 chr11 116652423 Intron 6 ASSOCIATION 18179892 LDL cholesterol 10.5228787453 ZNF259 LEAD_SNP rs2075290 chr11 116653296 Intron 7 ASSOCIATION 21386085 HDL Cholesterol - Triglycerides (HDLC-TG) 13.6989700043 ZNF259 ASSOCIATION 21386085 Metabolic syndrome 8.69897000434 ZNF259 ASSOCIATION 21386085 Waist Circumference - Triglycerides (WC-TG) 16.0 ZNF259 FUNCTIONAL_SNP rs2266788 chr11 116660686 Exon,non-coding 5b 7390 CEU:1.0;0.824, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7350481 chr11 116586283 Intergenic 4 67013 CEU:1.0;0.824, CHB:0.796;0.595, JPT:0.731;0.535 FUNCTIONAL_SNP rs2160669 chr11 116647607 Intergenic 5a 5689 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;0.94, YRI:1.0;1.0 FUNCTIONAL_SNP rs9326246 chr11 116611733 Intergenic 5a 41563 CEU:1.0;1.0, CHB:1.0;0.812, JPT:1.0;0.932 FUNCTIONAL_SNP rs6589566 chr11 116652423 Intron 6 873 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs3825041 chr11 116631707 Intron 7 21589 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;0.884 FUNCTIONAL_SNP rs10790162 chr11 116639104 Intron 7 14192 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;0.94 FUNCTIONAL_SNP rs7930786 chr11 116624727 Intron 7 28569 CEU:1.0;1.0, CHB:1.0;0.832, JPT:1.0;0.889, YRI:1.0;0.826 FUNCTIONAL_SNP rs6589564 chr11 116624153 Intron 7 29143 CEU:1.0;1.0, CHB:1.0;0.832, JPT:1.0;0.792 FUNCTIONAL_SNP rs6589565 chr11 116640237 Intron 7 13059 CEU:1.0;0.824, CHB:1.0;0.887, JPT:1.0;0.942 LEAD_SNP rs2266788 chr11 116660686 Exon,non-coding 5b ASSOCIATION 21386085 HDL Cholesterol - Triglycerides (HDLC-TG) 12.3010299957 ZNF259;APOA5 ASSOCIATION 21386085 Metabolic syndrome 8.69897000434 ZNF259;APOA5 ASSOCIATION 21386085 Triglycerides-Blood Pressure (TG-BP) 7.39794000867 ZNF259;APOA5 ASSOCIATION 21386085 Waist Circumference - Triglycerides (WC-TG) 15.6989700043 ZNF259;APOA5 FUNCTIONAL_SNP rs2160669 chr11 116647607 Intergenic 5a 13079 CEU:1.0;0.825, CHB:1.0;0.938, JPT:1.0;0.937 FUNCTIONAL_SNP rs6589566 chr11 116652423 Intron 6 8263 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs3825041 chr11 116631707 Intron 7 28979 CEU:1.0;0.825, CHB:1.0;0.938, JPT:1.0;0.884 FUNCTIONAL_SNP rs2075290 chr11 116653296 Intron 7 7390 CEU:1.0;0.824, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7930786 chr11 116624727 Intron 7 35959 CEU:1.0;0.825, CHB:1.0;0.878, JPT:1.0;0.884 FUNCTIONAL_SNP rs10790162 chr11 116639104 Intron 7 21582 CEU:1.0;0.825, CHB:1.0;0.938, JPT:1.0;0.937 FUNCTIONAL_SNP rs6589564 chr11 116624153 Intron 7 36533 CEU:1.0;0.825, CHB:1.0;0.878, JPT:1.0;0.831 LEAD_SNP rs1263173 chr11 116681008 Intergenic 5b ASSOCIATION 21347282 Coronary heart disease 6.69897000434 APOA5 - APOA4 LEAD_SNP rs7396835 chr11 116684028 Exon,non-coding 5a ASSOCIATION 19197348 Quantitative traits 9.0 APOA5 - APOA4 LEAD_SNP rs10047462 chr11 116722041 Intron 5b ASSOCIATION 21149283 Serum markers of iron status 24.3979400087 SIK3 LEAD_SNP rs2075292 chr11 116732512 Intron 4 ASSOCIATION 18193046 Triglycerides 7.30102999566 SIK3 FUNCTIONAL_SNP rs511676 chr11 116824884 Intron 5a 92372 CEU:1.0;1.0, CHB:1.0;0.867, JPT:0.948;0.817, YRI:1.0;1.0 FUNCTIONAL_SNP rs718847 chr11 116734146 Intron 5a 1634 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17174502 chr11 116759655 Intron 5b 27143 CEU:1.0;1.0, CHB:1.0;0.951, JPT:0.952;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs10732856 chr11 116907113 Intron 6 174601 CEU:1.0;1.0, CHB:1.0;0.909, JPT:0.948;0.817, YRI:1.0;1.0 FUNCTIONAL_SNP rs17120139 chr11 116774201 Intron 7 41689 CEU:1.0;1.0, CHB:1.0;0.909, JPT:0.95;0.903, YRI:1.0;1.0 FUNCTIONAL_SNP rs6589589 chr11 116932428 Intron 7 199916 CEU:1.0;1.0, CHB:1.0;0.907, JPT:0.95;0.86, YRI:1.0;1.0 FUNCTIONAL_SNP rs7950364 chr11 116898886 Intron 7 166374 CEU:1.0;1.0, CHB:1.0;0.909, JPT:0.95;0.86, YRI:1.0;1.0 FUNCTIONAL_SNP rs2000615 chr11 116915819 Intron 7 183307 CEU:1.0;1.0, CHB:1.0;0.909, JPT:0.95;0.86, YRI:1.0;1.0 LEAD_SNP rs12269901 chr11 116973929 Intron 7 ASSOCIATION 21347282 Coronary heart disease 5.69897000434 RPS27P19 - PAFAH1B2 LEAD_SNP rs7112513 chr11 117037361 Intron 5b ASSOCIATION 18464913 Protein quantitative trait loci 8.22184874962 PAFAH1B2 FUNCTIONAL_SNP rs10892082 chr11 117039325 Exon,non-coding 6 1964 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs7940310 chr11 117024481 Intron 7 12880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs236918 chr11 117091609 Intron 7 54248 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.944;0.805, YRI:0.93;0.865 LEAD_SNP rs236918 chr11 117091609 Intron 7 ASSOCIATION 21149283 Serum markers of iron status 27.0 PCSK7 FUNCTIONAL_SNP rs7112513 chr11 117037361 Intron 5b 54248 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.944;0.805, YRI:0.93;0.865 FUNCTIONAL_SNP rs7940310 chr11 117024481 Intron 7 67128 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.944;0.805, YRI:1.0;0.934 LEAD_SNP rs10892151 chr11 117531731 Intron 7 ASSOCIATION 19074352 Triglycerides 28.5228787453 DSCAML1 LEAD_SNP rs17122021 chr11 118145686 Intergenic 4 ASSOCIATION 19207018 Pain 6.15490195999 MPZL2 - CD3E FUNCTIONAL_SNP rs4938493 chr11 118144804 Intergenic 5a 882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7940554 chr11 118142930 Intergenic 5b 2756 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.908, YRI:1.0;1.0 FUNCTIONAL_SNP rs7940047 chr11 118142619 Intergenic 7 3067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs498872 chr11 118477367 Exon,non-coding 5b ASSOCIATION 21531791 Glioma 10.3010299957 PHLDB1 ASSOCIATION 19578367 Glioma 8.0 PHLDB1 LEAD_SNP rs4639966 chr11 118573519 Intron 5b ASSOCIATION 19838193 Systemic lupus erythematosus 16.0 TREH - DDX6 LEAD_SNP rs10892279 chr11 118611781 Intron 4 ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 12.0 TREH - DDX6 FUNCTIONAL_SNP rs2077579 chr11 118619047 Intron 4 7266 CEU:1.0;1.0, CHB:1.0;0.546, JPT:1.0;0.594 FUNCTIONAL_SNP rs10892280 chr11 118611817 Intron 4 36 CEU:1.0;1.0, CHB:1.0;0.546, JPT:1.0;0.573 FUNCTIONAL_SNP rs4936443 chr11 118740864 Intron 4 129083 CEU:1.0;0.943 FUNCTIONAL_SNP rs4936444 chr11 118743338 Intron 4 131557 CEU:1.0;0.943 FUNCTIONAL_SNP rs10892288 chr11 118644694 Intron 5b 32913 CEU:1.0;1.0, CHB:1.0;0.546, JPT:1.0;0.594 FUNCTIONAL_SNP rs10892294 chr11 118667357 Intron 5b 55576 CEU:1.0;0.894, CHB:1.0;0.546, JPT:1.0;0.594 FUNCTIONAL_SNP rs6421571 chr11 118743772 Intron 5b 131991 CEU:0.942;0.887 FUNCTIONAL_SNP rs4938573 chr11 118741842 Intron 5b 130061 CEU:1.0;0.943 FUNCTIONAL_SNP rs11826521 chr11 118610549 Intron 5b 1232 CEU:1.0;1.0, CHB:1.0;0.546, JPT:1.0;0.594 FUNCTIONAL_SNP rs6589684 chr11 118610957 Intron 5b 824 CEU:1.0;1.0, CHB:1.0;0.59, JPT:1.0;0.594, YRI:1.0;1.0 FUNCTIONAL_SNP rs4936441 chr11 118725660 Intron 5b 113879 CEU:1.0;0.942, CHB:1.0;0.502 FUNCTIONAL_SNP rs10892286 chr11 118642085 Intron 5b 30304 CEU:1.0;1.0, CHB:1.0;0.546, JPT:1.0;0.594 FUNCTIONAL_SNP rs7942535 chr11 118681464 Intron 6 69683 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11217033 chr11 118673706 Intron 6 61925 CEU:1.0;1.0, CHB:1.0;0.546, JPT:1.0;0.594 FUNCTIONAL_SNP rs2155433 chr11 118612921 Intron 6 1140 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.939;0.788 FUNCTIONAL_SNP rs11217020 chr11 118639353 Intron 6 27572 CEU:1.0;1.0, CHB:1.0;0.516, JPT:1.0;0.594 FUNCTIONAL_SNP rs10892287 chr11 118642999 Intron 6 31218 CEU:1.0;1.0, CHB:1.0;0.546, JPT:1.0;0.594 FUNCTIONAL_SNP rs10892293 chr11 118665575 Intron 7 53794 CEU:1.0;1.0, CHB:1.0;0.543, JPT:1.0;0.594 FUNCTIONAL_SNP rs715412 chr11 118684610 Intron 7 72829 CEU:1.0;1.0, CHB:1.0;0.546, JPT:1.0;0.594 FUNCTIONAL_SNP rs17122453 chr11 118683564 Intron 7 71783 CEU:1.0;0.865, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10892272 chr11 118602707 Intron 7 9074 CEU:1.0;0.804, JPT:1.0;0.594 LEAD_SNP rs6421571 chr11 118743772 Intron 5b ASSOCIATION 21399635 Primary biliary cirrhosis 11.5228787453 DDX6 - CXCR5 FUNCTIONAL_SNP rs2077579 chr11 118619047 Intron 4 124725 CEU:0.942;0.887, CHB:0.915;0.718, JPT:0.783;0.554 FUNCTIONAL_SNP rs10892279 chr11 118611781 Intron 4 131991 CEU:0.942;0.887 FUNCTIONAL_SNP rs10892280 chr11 118611817 Intron 4 131955 CEU:0.942;0.887, CHB:0.915;0.718, JPT:0.764;0.523 FUNCTIONAL_SNP rs4936443 chr11 118740864 Intron 4 2908 CEU:1.0;0.943, CHB:1.0;0.928, JPT:1.0;0.72 FUNCTIONAL_SNP rs4936444 chr11 118743338 Intron 4 434 CEU:1.0;0.943, CHB:1.0;0.928, JPT:1.0;0.72, YRI:1.0;0.896 FUNCTIONAL_SNP rs10892288 chr11 118644694 Intron 5b 99078 CEU:0.942;0.887, CHB:0.915;0.718, JPT:0.783;0.554 FUNCTIONAL_SNP rs4938573 chr11 118741842 Intron 5b 1930 CEU:1.0;0.943, CHB:1.0;0.928, JPT:1.0;0.72, YRI:1.0;0.858 FUNCTIONAL_SNP rs11826521 chr11 118610549 Intron 5b 133223 CEU:0.942;0.887, CHB:0.915;0.718, JPT:0.783;0.554 FUNCTIONAL_SNP rs6589684 chr11 118610957 Intron 5b 132815 CEU:0.942;0.887, CHB:0.84;0.655, JPT:0.783;0.554 FUNCTIONAL_SNP rs4936441 chr11 118725660 Intron 5b 18112 CEU:1.0;0.942, CHB:1.0;0.789, JPT:1.0;0.72, YRI:1.0;0.902 FUNCTIONAL_SNP rs10892286 chr11 118642085 Intron 5b 101687 CEU:0.942;0.887, CHB:0.915;0.718, JPT:0.783;0.554 FUNCTIONAL_SNP rs7942535 chr11 118681464 Intron 6 62308 CEU:0.942;0.887 FUNCTIONAL_SNP rs11217033 chr11 118673706 Intron 6 70066 CEU:0.942;0.887, CHB:0.915;0.718, JPT:0.783;0.554 FUNCTIONAL_SNP rs2155433 chr11 118612921 Intron 6 130851 CEU:0.942;0.887 FUNCTIONAL_SNP rs11217020 chr11 118639353 Intron 6 104419 CEU:0.942;0.887, CHB:0.903;0.688, JPT:0.783;0.554 FUNCTIONAL_SNP rs10892287 chr11 118642999 Intron 6 100773 CEU:0.942;0.887, CHB:0.915;0.718, JPT:0.783;0.554 FUNCTIONAL_SNP rs10892293 chr11 118665575 Intron 7 78197 CEU:0.942;0.887, CHB:0.914;0.716, JPT:0.783;0.554 FUNCTIONAL_SNP rs715412 chr11 118684610 Intron 7 59162 CEU:0.942;0.887, CHB:0.915;0.718, JPT:0.783;0.554 LEAD_SNP rs12797755 chr11 120809460 Intron 7 ASSOCIATION 20125193 Cognitive test performance 5.09691001301 GRIK4 LEAD_SNP rs7121446 chr11 121954657 Intergenic 5b ASSOCIATION 20838585 Cardiovascular disease risk factors 5.52287874528 SORL1 - BLID FUNCTIONAL_SNP rs3087678 chr11 121960257 Exon,non-coding 5b 5600 CEU:1.0;0.936, CHB:1.0;0.822, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11218519 chr11 121939553 Intergenic 5b 15104 CEU:1.0;0.861, JPT:1.0;0.585 FUNCTIONAL_SNP rs11218518 chr11 121939262 Intergenic 6 15395 CEU:1.0;0.873, JPT:1.0;0.585 FUNCTIONAL_SNP rs10502253 chr11 121949653 Intergenic 7 5004 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17337544 chr11 121946256 Intergenic 7 8401 CEU:1.0;0.873, JPT:1.0;0.585 FUNCTIONAL_SNP rs17337530 chr11 121937594 Intergenic 7 17063 CEU:1.0;0.873, JPT:1.0;0.584 FUNCTIONAL_SNP rs2155093 chr11 121937932 Intergenic 7 16725 CEU:1.0;0.873, JPT:1.0;0.584 LEAD_SNP rs577948 chr11 122030190 Intergenic 5b ASSOCIATION 19779542 Myopia (pathological) 6.69897000434 BLID - GLULP3 LEAD_SNP rs565229 chr11 122189465 Intron 7 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.39794000867 BLID - GLULP3 FUNCTIONAL_SNP rs660546 chr11 122185174 Intron 7 4291 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6589964 chr11 122870683 Intergenic 6 ASSOCIATION 21102462 Menarche (age at onset) 11.6989700043 BSX - RPL34P23 LEAD_SNP rs735665 chr11 123361397 Intergenic 4 ASSOCIATION 20639881 Follicular lymphoma 8.39794000867 ASAM - GRAMD1B ASSOCIATION 18758461 Chronic lymphocytic leukemia 11.3979400087 ASAM - GRAMD1B LEAD_SNP rs2126709 chr11 123595927 Exon,non-coding 5b ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 6.39794000867 ZNF202 LEAD_SNP rs544368 chr11 124537995 Intron 7 ASSOCIATION 18711365 Bipolar disorder 5.22184874962 SIAE LEAD_SNP rs12807809 chr11 124606285 Intergenic 5b ASSOCIATION 19571808 Schizophrenia 8.69897000434 SPA17 - NRGN FUNCTIONAL_SNP rs1939214 chr11 124605290 Intergenic 7 995 CEU:1.0;0.939, CHB:1.0;0.517, JPT:1.0;0.588, YRI:1.0;0.889 LEAD_SNP rs750338 chr11 125172593 Intron 5b ASSOCIATION 21703634 Alcohol dependence 6.0 PKNOX2 LEAD_SNP rs563519 chr11 126028717 Intergenic 2b ASSOCIATION 20445134 Heart failure 5.52287874528 NAP1L1P1 - RPUSD4 FUNCTIONAL_SNP rs563710 chr11 126028787 Intergenic 5b 70 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;0.945 LEAD_SNP rs1695739 chr11 126196175 Intron 4 ASSOCIATION 20595579 Longevity 6.30102999566 DCPS FUNCTIONAL_SNP rs7932766 chr11 126162862 Coding 5a 33313 CEU:1.0;0.947 FUNCTIONAL_SNP rs8177376 chr11 126163612 Coding 5a 32563 CEU:1.0;0.948 FUNCTIONAL_SNP rs529328 chr11 126133641 Exon,non-coding 5a 62534 CEU:1.0;0.948 FUNCTIONAL_SNP rs17656 chr11 126133182 Exon,non-coding 3a 62993 CEU:1.0;0.948 FUNCTIONAL_SNP rs667627 chr11 126147697 Exon,non-coding 5b 48478 CEU:1.0;0.946 FUNCTIONAL_SNP rs563011 chr11 126151422 Intergenic 5b 44753 CEU:1.0;0.948 FUNCTIONAL_SNP rs522486 chr11 126059949 Intergenic 5b 136226 CEU:0.945;0.894 FUNCTIONAL_SNP rs534804 chr11 126075768 Intron 6 120407 CEU:1.0;0.948 FUNCTIONAL_SNP rs8177365 chr11 126159860 Intron 6 36315 CEU:1.0;0.948 FUNCTIONAL_SNP rs8177380 chr11 126165566 Intron 6 30609 CEU:1.0;0.948 FUNCTIONAL_SNP rs598169 chr11 126089053 Intron 7 107122 CEU:1.0;0.943, CHB:1.0;0.741, JPT:1.0;1.0 LEAD_SNP rs4937126 chr11 126281897 Intron 2b ASSOCIATION 21378990 Coronary heart disease 5.30102999566 ST3GAL4 FUNCTIONAL_SNP rs2230278 chr11 126277216 Coding 5b 4681 CEU:1.0;1.0, CHB:1.0;0.869, JPT:0.89;0.717, YRI:0.946;0.638 FUNCTIONAL_SNP rs2230279 chr11 126278075 Coding 5b 3822 CEU:0.954;0.909, CHB:1.0;0.869, JPT:1.0;0.819, YRI:0.948;0.646 FUNCTIONAL_SNP rs1316361 chr11 126279365 Intron 5b 2532 CEU:1.0;1.0, CHB:1.0;0.866, JPT:0.943;0.766, YRI:0.816;0.638 LEAD_SNP rs4935969 chr11 126296589 Intron 5b ASSOCIATION 20585627 Hair color 6.39794000867 KIRREL3 LEAD_SNP rs1557488 chr11 126619190 Intron 5b ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.30102999566 KIRREL3 LEAD_SNP rs1939992 chr11 126809705 Intron 5a ASSOCIATION 18464913 Protein quantitative trait loci 6.0 KIRREL3 FUNCTIONAL_SNP rs1939990 chr11 126809014 Intron 7 691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1939991 chr11 126809077 Intron 7 628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs620875 chr11 126859157 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 5.52287874528 KIRREL3 FUNCTIONAL_SNP rs474504 chr11 126867324 Intron 2b 8167 CEU:1.0;1.0 FUNCTIONAL_SNP rs1784326 chr11 126812524 Intron 5b 46633 CEU:0.905;0.82 FUNCTIONAL_SNP rs1793673 chr11 126817556 Intron 5b 41601 CEU:0.905;0.82 FUNCTIONAL_SNP rs625987 chr11 126841665 Intron 5b 17492 CEU:1.0;1.0 FUNCTIONAL_SNP rs583795 chr11 126848207 Intron 5b 10950 CEU:1.0;1.0 FUNCTIONAL_SNP rs600903 chr11 126847667 Intron 6 11490 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs617957 chr11 126835502 Intron 6 23655 CEU:0.905;0.82, YRI:1.0;1.0 FUNCTIONAL_SNP rs1793662 chr11 126829897 Intron 6 29260 CEU:0.905;0.819, YRI:1.0;1.0 FUNCTIONAL_SNP rs1784335 chr11 126831726 Intron 7 27431 CEU:0.905;0.82 FUNCTIONAL_SNP rs615586 chr11 126848667 Intron 7 10490 CEU:1.0;1.0 FUNCTIONAL_SNP rs600947 chr11 126847694 Intron 7 11463 CEU:1.0;1.0 FUNCTIONAL_SNP rs619457 chr11 126859490 Intron 7 333 CEU:1.0;1.0 FUNCTIONAL_SNP rs646236 chr11 126851452 Intron 7 7705 CEU:1.0;1.0 FUNCTIONAL_SNP rs480493 chr11 126849576 Intron 7 9581 CEU:1.0;1.0 FUNCTIONAL_SNP rs1784309 chr11 126823276 Intron 7 35881 CEU:0.897;0.805, YRI:1.0;1.0 FUNCTIONAL_SNP rs585079 chr11 126846430 Intron 7 12727 CEU:1.0;1.0 LEAD_SNP rs6590322 chr11 128206410 Intergenic 4 ASSOCIATION 19668339 Hippocampal atrophy 5.04575749056 NCRNA00288 - ETS1 FUNCTIONAL_SNP rs4937324 chr11 128216839 Intergenic 4 10429 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 LEAD_SNP rs6590330 chr11 128311059 Intergenic 6 ASSOCIATION 19838193 Systemic lupus erythematosus 24.6989700043 NCRNA00288 - ETS1 FUNCTIONAL_SNP rs12293665 chr11 128308361 Intergenic 7 2698 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs1128334 chr11 128328959 Exon,non-coding 7 ASSOCIATION 20169177 Systemic lupus erythematosus 10.6989700043 ETS1 FUNCTIONAL_SNP rs12574073 chr11 128319478 Intergenic 3a 9481 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs12576753 chr11 128304141 Intergenic 5b 24818 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12575600 chr11 128324869 Intergenic 7 4090 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11221332 chr11 128380974 Intron 7 ASSOCIATION 20190752 Celiac disease 15.3010299957 ETS1 FUNCTIONAL_SNP rs11221335 chr11 128385906 Intron 5b 4932 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7117768 chr11 128383924 Intron 7 2950 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1550976 chr11 131320070 Intron 5b ASSOCIATION 21182207 Asperger disorder 5.52287874528 NTM LEAD_SNP rs992564 chr11 131336074 Intron 5b ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.39794000867 NTM FUNCTIONAL_SNP rs7933020 chr11 131338623 Intron 4 2549 CEU:1.0;0.879, JPT:0.925;0.546 FUNCTIONAL_SNP rs1448357 chr11 131337119 Intron 5b 1045 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.908, YRI:1.0;0.914 FUNCTIONAL_SNP rs1546587 chr11 131356250 Intron 5b 20176 CEU:1.0;1.0, CHB:0.74;0.523, JPT:0.867;0.538 FUNCTIONAL_SNP rs4937628 chr11 131353187 Intron 6 17113 CEU:1.0;1.0, CHB:0.795;0.603, JPT:0.812;0.519 FUNCTIONAL_SNP rs12576852 chr11 131342785 Intron 6 6711 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;0.953, YRI:1.0;0.914 FUNCTIONAL_SNP rs7951040 chr11 131355421 Intron 7 19347 CEU:1.0;1.0, CHB:0.844;0.679, JPT:0.929;0.602 FUNCTIONAL_SNP rs12577686 chr11 131345351 Intron 7 9277 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs4937630 chr11 131353445 Intron 7 17371 CEU:1.0;1.0, CHB:0.843;0.646, JPT:0.935;0.626 FUNCTIONAL_SNP rs1992896 chr11 131362647 Intron 7 26573 CEU:1.0;0.866 FUNCTIONAL_SNP rs10894403 chr11 131354861 Intron 7 18787 CEU:1.0;1.0, CHB:0.839;0.639, JPT:1.0;0.697 FUNCTIONAL_SNP rs7951332 chr11 131355411 Intron 7 19337 CEU:1.0;1.0, CHB:0.843;0.646, JPT:0.935;0.626 FUNCTIONAL_SNP rs7108990 chr11 131350655 Intron 7 14581 CEU:1.0;1.0, CHB:0.894;0.76, JPT:1.0;0.682 LEAD_SNP rs4397868 chr11 133566985 Intergenic 7 ASSOCIATION 19448619 Menopause (age at onset) 6.52287874528 OPCML - SPATA19 LEAD_SNP rs1031381 chr11 134088682 Intron 7 ASSOCIATION 17903297 Cognitive test performance 5.22184874962 NCAPD3 LEAD_SNP rs10774021 chr12 349298 Intergenic 6 ASSOCIATION 20383146 Chronic kidney disease 9.0 SLC6A13 FUNCTIONAL_SNP rs11062102 chr12 348785 Intergenic 5b 513 CEU:1.0;1.0 LEAD_SNP rs12425791 chr12 783484 Intergenic 4 ASSOCIATION 19369658 Stroke 9.0 NINJ2 - WNK1 LEAD_SNP rs1006737 chr12 2345295 Intergenic 7 ASSOCIATION 20351715 Bipolar disorder and major depressive disorder (combined) 7.52287874528 CACNA1C ASSOCIATION 18711365 Bipolar disorder 7.15490195999 CACNA1C FUNCTIONAL_SNP rs10774035 chr12 2368674 Intergenic 4 23379 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0 FUNCTIONAL_SNP rs2007044 chr12 2344960 Intergenic 5a 335 CEU:1.0;0.809 FUNCTIONAL_SNP rs1024582 chr12 2402246 Intergenic 5b 56951 CEU:1.0;0.918, CHB:1.0;0.65 FUNCTIONAL_SNP rs11062170 chr12 2348844 Intergenic 5b 3549 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4298967 chr12 2408194 Intergenic 5b 62899 CEU:1.0;0.918, CHB:1.0;0.65 FUNCTIONAL_SNP rs769087 chr12 2344644 Intergenic 6 651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs4765905 chr12 2349584 Intergenic 6 4289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs10774036 chr12 2386948 Intergenic 7 41653 CEU:1.0;0.958, CHB:0.819;0.67, JPT:1.0;1.0 FUNCTIONAL_SNP rs758170 chr12 2361460 Intergenic 7 16165 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0 FUNCTIONAL_SNP rs12315711 chr12 2346830 Intergenic 7 1535 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4765904 chr12 2332393 Intergenic 7 12902 CEU:0.907;0.822, CHB:1.0;1.0, JPT:1.0;0.821, YRI:0.893;0.61 FUNCTIONAL_SNP rs10744560 chr12 2387099 Intergenic 7 41804 CEU:1.0;0.958, CHB:0.819;0.671, JPT:1.0;1.0 FUNCTIONAL_SNP rs2159100 chr12 2346393 Intergenic 7 1098 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs216013 chr12 2729632 Intergenic 7 ASSOCIATION 18535201 Warfarin maintenance dose 6.04575749056 CACNA1C LEAD_SNP rs10848704 chr12 2882544 Intergenic 5b ASSOCIATION 19197348 Quantitative traits 5.69897000434 LOC283440 LEAD_SNP rs887304 chr12 3757548 Intergenic 6 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 6.09691001301 EFCAB4B LEAD_SNP rs10848911 chr12 3814238 Intergenic 5b ASSOCIATION 19478329 Male infertility 5.39794000867 EFCAB4B FUNCTIONAL_SNP rs241969 chr12 3838567 Intergenic 4 24329 CEU:1.0;0.855, CHB:1.0;0.938, JPT:1.0;1.0 FUNCTIONAL_SNP rs241972 chr12 3837845 Intergenic 4 23607 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs241974 chr12 3837202 Intergenic 4 22964 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11062763 chr12 3803104 Intergenic 7 11134 CEU:1.0;1.0, CHB:1.0;0.874, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10848910 chr12 3802683 Intergenic 7 11555 CEU:1.0;1.0, CHB:1.0;0.84, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10848912 chr12 3831684 Intergenic 7 17446 CEU:1.0;0.927, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4238010 chr12 4118317 Intergenic 7 ASSOCIATION 19107115 Major depressive disorder 5.22184874962 HIN1L - RPL18P9 LEAD_SNP rs11611647 chr12 4333919 Intergenic 4 ASSOCIATION 20139978 Hematological and biochemical traits 8.22184874962 RPL18P9 - CCND2 FUNCTIONAL_SNP rs7138216 chr12 4334308 Intergenic 5b 389 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;1.0 FUNCTIONAL_SNP rs7309743 chr12 4334295 Intergenic 5b 376 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;0.886, YRI:1.0;1.0 FUNCTIONAL_SNP rs12320749 chr12 4331647 Intergenic 6 2272 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;0.944 FUNCTIONAL_SNP rs4573764 chr12 4330215 Intergenic 7 3704 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.938;0.879, YRI:1.0;1.0 FUNCTIONAL_SNP rs10849020 chr12 4332009 Intergenic 7 1910 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs10849023 chr12 4332478 Intergenic 7 1441 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.881, YRI:1.0;1.0 LEAD_SNP rs10849033 chr12 4425122 Intergenic 5a ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 5.04575749056 CCND2 - C12orf5 FUNCTIONAL_SNP rs12304233 chr12 4465340 Intergenic 4 40218 CEU:1.0;1.0 FUNCTIONAL_SNP rs11829926 chr12 4425110 Intergenic 5a 12 CEU:1.0;1.0, JPT:1.0;0.62 FUNCTIONAL_SNP rs10849031 chr12 4423134 Intergenic 7 1988 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs10774217 chr12 4423612 Intergenic 7 1510 CEU:1.0;1.0, JPT:1.0;0.62, YRI:1.0;0.533 FUNCTIONAL_SNP rs11063088 chr12 4444742 Intergenic 7 19620 CEU:1.0;1.0 FUNCTIONAL_SNP rs17782421 chr12 4463650 Intergenic 7 38528 CEU:1.0;1.0 FUNCTIONAL_SNP rs10450716 chr12 4457682 Intergenic 7 32560 CEU:1.0;1.0 FUNCTIONAL_SNP rs4238015 chr12 4427983 Intergenic 7 2861 CEU:1.0;1.0 LEAD_SNP rs2970818 chr12 4606168 Intergenic 6 ASSOCIATION 20558539 Serum phosphorus levels 8.39794000867 C12orf4 FUNCTIONAL_SNP rs11063182 chr12 4581371 Intergenic 4 24797 CEU:1.0;0.899 FUNCTIONAL_SNP rs11063189 chr12 4588248 Intergenic 5a 17920 CEU:1.0;0.899 FUNCTIONAL_SNP rs11063181 chr12 4580657 Intergenic 5b 25511 CEU:1.0;0.816 FUNCTIONAL_SNP rs2970808 chr12 4640362 Intergenic 5b 34194 CEU:1.0;0.899, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12366731 chr12 4636095 Intergenic 5b 29927 CEU:1.0;0.816, CHB:1.0;1.0 FUNCTIONAL_SNP rs1029769 chr12 4645448 Intergenic 6 39280 CEU:1.0;0.899, CHB:1.0;1.0 FUNCTIONAL_SNP rs11063183 chr12 4583182 Intergenic 6 22986 CEU:1.0;0.816, CHB:1.0;1.0 FUNCTIONAL_SNP rs11063199 chr12 4591854 Intergenic 6 14314 CEU:1.0;0.899, CHB:1.0;1.0 FUNCTIONAL_SNP rs10849086 chr12 4645400 Intergenic 6 39232 CEU:1.0;0.899, CHB:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs11063205 chr12 4597745 Intergenic 6 8423 CEU:1.0;0.899, CHB:1.0;1.0 FUNCTIONAL_SNP rs11063207 chr12 4603698 Intergenic 6 2470 CEU:1.0;0.899, CHB:1.0;1.0 FUNCTIONAL_SNP rs4323977 chr12 4615481 Intergenic 6 9313 CEU:1.0;0.801, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2909381 chr12 4606527 Intergenic 6 359 CEU:1.0;0.816, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10849083 chr12 4642572 Intergenic 6 36404 CEU:1.0;0.899, CHB:1.0;1.0 FUNCTIONAL_SNP rs2907494 chr12 4642184 Intergenic 6 36016 CEU:1.0;0.899, CHB:1.0;1.0 FUNCTIONAL_SNP rs2907495 chr12 4638164 Intergenic 6 31996 CEU:1.0;0.899, CHB:1.0;1.0 FUNCTIONAL_SNP rs2907499 chr12 4616901 Intergenic 6 10733 CEU:1.0;0.899, CHB:1.0;1.0 FUNCTIONAL_SNP rs7304949 chr12 4609625 Intergenic 6 3457 CEU:1.0;0.899, CHB:1.0;1.0 FUNCTIONAL_SNP rs11063177 chr12 4579106 Intergenic 7 27062 CEU:1.0;0.816 FUNCTIONAL_SNP rs10849089 chr12 4661387 Intergenic 7 55219 CEU:1.0;0.816, CHB:1.0;1.0 FUNCTIONAL_SNP rs7958162 chr12 4600634 Intergenic 7 5534 CEU:1.0;0.816 FUNCTIONAL_SNP rs11063215 chr12 4636814 Intergenic 7 30646 CEU:1.0;0.816, CHB:1.0;1.0 FUNCTIONAL_SNP rs2970810 chr12 4608103 Intergenic 7 1935 CEU:1.0;0.816, CHB:1.0;1.0 FUNCTIONAL_SNP rs2970812 chr12 4625836 Intergenic 7 19668 CEU:1.0;0.816 FUNCTIONAL_SNP rs10849090 chr12 4669954 Intergenic 7 63786 CEU:1.0;1.0 FUNCTIONAL_SNP rs2909380 chr12 4607342 Intergenic 7 1174 CEU:1.0;0.816, CHB:1.0;1.0 FUNCTIONAL_SNP rs2907498 chr12 4628899 Intergenic 7 22731 CEU:1.0;0.816, CHB:1.0;1.0, YRI:1.0;0.764 FUNCTIONAL_SNP rs10849085 chr12 4644879 Intergenic 7 38711 CEU:1.0;0.816, CHB:1.0;1.0 LEAD_SNP rs12302829 chr12 5140484 Intergenic 6 ASSOCIATION 20585324 Conduct disorder (symptom count) 5.09691001301 KCNA1 - KCNA5 LEAD_SNP rs12579350 chr12 5797101 Intergenic 6 ASSOCIATION 19165232 Panic disorder 8.39794000867 ANO2 FUNCTIONAL_SNP rs4930791 chr12 5809999 Intergenic 5b 12898 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;0.915, YRI:1.0;0.943 FUNCTIONAL_SNP rs4930784 chr12 5798339 Intergenic 6 1238 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1860960 chr12 5844606 Intergenic 7 47505 CEU:1.0;0.866, CHB:1.0;0.888, JPT:1.0;0.91, YRI:1.0;1.0 LEAD_SNP rs1800693 chr12 6440009 Intergenic 5b ASSOCIATION 21399635 Primary biliary cirrhosis 8.69897000434 TNFRSF1A ASSOCIATION 19525953 Multiple sclerosis 10.6989700043 TNFRSF1A FUNCTIONAL_SNP rs4149576 chr12 6449115 Intergenic 4 9106 CEU:0.958;0.815, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1860545 chr12 6446777 Intergenic 4 6768 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4149584 chr12 6442643 Intergenic 5b ASSOCIATION 19525953 Multiple sclerosis 5.30102999566 TNFRSF1A LEAD_SNP rs11616188 chr12 6502742 Intergenic 5b ASSOCIATION 21743469 Ankylosing spondylitis 11.3979400087 LTBR - RPL31P10 LEAD_SNP rs10492096 chr12 6580582 Intergenic 4 ASSOCIATION 17903296 Hip geometry 5.52287874528 VAMP1 LEAD_SNP rs7136716 chr12 7691134 Intergenic 7 ASSOCIATION 20139978 Hematological and biochemical traits 25.5228787453 CD163 - GAPDHP31 FUNCTIONAL_SNP rs11054354 chr12 7689893 Intergenic 7 1241 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.922 FUNCTIONAL_SNP rs11054376 chr12 7693399 Intergenic 7 2265 CEU:1.0;0.907, CHB:1.0;0.954, JPT:1.0;0.865, YRI:1.0;0.962 FUNCTIONAL_SNP rs4883001 chr12 7692201 Intergenic 7 1067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6487679 chr12 9371332 Intergenic 6 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (AST) 6.0 PZP - A2MP1 FUNCTIONAL_SNP rs1017302 chr12 9367402 Intergenic 2b 3930 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;0.842 FUNCTIONAL_SNP rs7298108 chr12 9376168 Intergenic 7 4836 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846, YRI:1.0;0.879 LEAD_SNP rs3764021 chr12 9833628 Intergenic 7 ASSOCIATION 17554300 Type 1 diabetes 7.30102999566 CLEC2D LEAD_SNP rs11052552 chr12 9855958 Intergenic 6 ASSOCIATION 17554300 Type 1 diabetes 6.15490195999 NPM1P7 - CLECL1 LEAD_SNP rs4763879 chr12 9910164 Intergenic 5a ASSOCIATION 19430480 Type 1 diabetes 10.6989700043 CD69 LEAD_SNP rs2908835 chr12 11648418 Intergenic 6 ASSOCIATION 21130836 Information processing speed 5.15490195999 PRB2 - RNU7-60P FUNCTIONAL_SNP rs2908833 chr12 11651195 Intergenic 4 2777 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.923 FUNCTIONAL_SNP rs10845368 chr12 11645685 Intergenic 5b 2733 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10845354 chr12 11595999 Intergenic 6 52419 CEU:1.0;0.952, CHB:1.0;1.0, JPT:0.87;0.674 FUNCTIONAL_SNP rs2965741 chr12 11650062 Intergenic 6 1644 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4288846 chr12 11597015 Intergenic 7 51403 CEU:0.949;0.818 LEAD_SNP rs2187642 chr12 11855624 Intergenic 7 ASSOCIATION 18391951 Height 5.69897000434 ETV6 LEAD_SNP rs2856321 chr12 11855773 Intergenic 5b ASSOCIATION 20881960 Height 14.3010299957 ETV6 FUNCTIONAL_SNP rs11054424 chr12 11860170 Intergenic 3a 4397 CEU:0.95;0.861, CHB:1.0;0.827, JPT:1.0;0.939 FUNCTIONAL_SNP rs17818461 chr12 11864104 Intergenic 3b 8331 CEU:1.0;0.819, CHB:0.942;0.645, JPT:1.0;0.701 FUNCTIONAL_SNP rs17818624 chr12 11896846 Intergenic 4 41073 CEU:0.958;0.918, CHB:0.782;0.53, JPT:0.916;0.579 FUNCTIONAL_SNP rs2724616 chr12 11870768 Intergenic 4 14995 CEU:1.0;1.0, CHB:1.0;0.914, JPT:1.0;0.938 FUNCTIONAL_SNP rs1009953 chr12 11893128 Intergenic 4 37355 CEU:1.0;0.813, CHB:0.884;0.591 FUNCTIONAL_SNP rs2724648 chr12 11858191 Intergenic 4 2418 CEU:1.0;1.0, CHB:1.0;0.914, JPT:1.0;0.882 FUNCTIONAL_SNP rs11054423 chr12 11859731 Intergenic 4 3958 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;0.935 FUNCTIONAL_SNP rs2954980 chr12 11859548 Intergenic 4 3775 CEU:1.0;1.0, CHB:1.0;0.914, JPT:1.0;1.0 FUNCTIONAL_SNP rs17818498 chr12 11873288 Intergenic 5a 17515 CEU:1.0;0.959, CHB:1.0;0.679, JPT:0.916;0.579 FUNCTIONAL_SNP rs11054433 chr12 11887446 Intergenic 5a 31673 CEU:1.0;0.96, CHB:0.827;0.564, JPT:1.0;0.544 FUNCTIONAL_SNP rs1009954 chr12 11898099 Intergenic 5b 42326 CEU:0.958;0.918, CHB:0.884;0.591 FUNCTIONAL_SNP rs11615175 chr12 11898958 Intergenic 5b 43185 CEU:1.0;0.843, CHB:0.832;0.573 FUNCTIONAL_SNP rs10845408 chr12 11880581 Intergenic 5b 24808 CEU:1.0;0.959, JPT:1.0;0.585 FUNCTIONAL_SNP rs2724633 chr12 11902506 Intergenic 6 46733 CEU:0.955;0.806 FUNCTIONAL_SNP rs2724645 chr12 11892263 Intergenic 6 36490 CEU:1.0;0.822, CHB:0.944;0.652 FUNCTIONAL_SNP rs2051525 chr12 11888423 Intergenic 6 32650 CEU:1.0;0.959, CHB:0.884;0.591, JPT:1.0;0.526 FUNCTIONAL_SNP rs2856322 chr12 11856476 Intergenic 7 703 CEU:1.0;0.96, CHB:0.886;0.575, JPT:1.0;0.63 FUNCTIONAL_SNP rs2856324 chr12 11876589 Intergenic 7 20816 CEU:1.0;0.822, CHB:0.886;0.575 FUNCTIONAL_SNP rs2860431 chr12 11866063 Intergenic 7 10290 CEU:1.0;0.847, CHB:0.953;0.908, JPT:1.0;0.934 FUNCTIONAL_SNP rs2856344 chr12 11890771 Intergenic 7 34998 CEU:1.0;0.822, CHB:0.889;0.606 FUNCTIONAL_SNP rs1009951 chr12 11892896 Intergenic 7 37123 CEU:1.0;0.813, CHB:0.88;0.582, JPT:1.0;0.5 FUNCTIONAL_SNP rs4763719 chr12 11877420 Intergenic 7 21647 CEU:1.0;0.813, CHB:0.884;0.591, JPT:1.0;0.526, YRI:1.0;0.664 FUNCTIONAL_SNP rs11054421 chr12 11855093 Intergenic 7 680 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs762717 chr12 11868570 Intergenic 7 12797 CEU:1.0;0.813, CHB:0.937;0.599, JPT:1.0;0.585 FUNCTIONAL_SNP rs11054439 chr12 11895308 Intergenic 7 39535 CEU:0.958;0.847, CHB:0.785;0.514, JPT:0.916;0.531 FUNCTIONAL_SNP rs2724588 chr12 11862815 Intergenic 7 7042 CEU:1.0;1.0, CHB:1.0;0.868, JPT:1.0;1.0 FUNCTIONAL_SNP rs2900208 chr12 11878464 Intergenic 7 22691 CEU:1.0;0.923, JPT:1.0;0.541 FUNCTIONAL_SNP rs2416883 chr12 11876394 Intergenic 7 20621 CEU:0.955;0.805, CHB:1.0;0.679, JPT:0.919;0.617 FUNCTIONAL_SNP rs2187641 chr12 11855290 Intergenic 7 483 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;0.935 FUNCTIONAL_SNP rs2187642 chr12 11855624 Intergenic 7 149 CEU:1.0;0.959, CHB:1.0;0.657, JPT:1.0;0.652, YRI:1.0;0.746 LEAD_SNP rs2160519 chr12 13787846 Intergenic 7 ASSOCIATION 19734545 Cognitive performance 5.69897000434 GRIN2B LEAD_SNP rs4764039 chr12 14064461 Intergenic 5b ASSOCIATION 21116278 Total ventricular volume 5.52287874528 GRIN2B FUNCTIONAL_SNP rs766831 chr12 14109671 Intergenic 5a 45210 CEU:1.0;0.825 FUNCTIONAL_SNP rs10845858 chr12 14045718 Intergenic 6 18743 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11055663 chr12 14037888 Intergenic 6 26573 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11055671 chr12 14052983 Intergenic 6 11478 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs11055680 chr12 14057478 Intergenic 6 6983 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11055670 chr12 14051237 Intergenic 6 13224 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10492142 chr12 14045266 Intergenic 6 19195 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11055687 chr12 14072223 Intergenic 7 7762 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 LEAD_SNP rs2900333 chr12 14653867 Intergenic 7 ASSOCIATION 20543847 Testicular germ cell cancer 9.22184874962 ATF7IP - PLBD1 FUNCTIONAL_SNP rs7310929 chr12 14593902 Intergenic 5b 59965 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs7307092 chr12 14632257 Intergenic 5b 21610 CEU:1.0;0.866, CHB:1.0;0.533, JPT:0.941;0.836 FUNCTIONAL_SNP rs10772782 chr12 14592843 Intergenic 6 61024 CEU:1.0;0.866, CHB:1.0;0.533, JPT:0.941;0.836 FUNCTIONAL_SNP rs10846001 chr12 14623304 Intergenic 7 30563 CEU:1.0;0.826, CHB:1.0;0.594, JPT:0.94;0.834 FUNCTIONAL_SNP rs10846005 chr12 14640187 Intergenic 7 13680 CEU:1.0;0.866, CHB:1.0;0.533, JPT:0.937;0.828 FUNCTIONAL_SNP rs4492869 chr12 14628445 Intergenic 7 25422 CEU:1.0;0.865, CHB:1.0;0.529, JPT:0.934;0.82 FUNCTIONAL_SNP rs12370700 chr12 14570639 Intergenic 7 83228 CEU:1.0;0.862, CHB:1.0;0.513, JPT:0.922;0.79 FUNCTIONAL_SNP rs4444133 chr12 14580138 Intergenic 7 73729 CEU:1.0;0.89, JPT:0.913;0.833 FUNCTIONAL_SNP rs11055976 chr12 14604912 Intergenic 7 48955 CEU:1.0;0.907, JPT:0.939;0.831 LEAD_SNP rs17415853 chr12 15930805 Intergenic 5b ASSOCIATION 18464913 Protein quantitative trait loci 6.15490195999 EPS8 LEAD_SNP rs9971637 chr12 17373739 Intergenic 7 ASSOCIATION 19734901 Amyotrophic lateral sclerosis 5.69897000434 RPL7P40 - RERGL LEAD_SNP rs10770612 chr12 20230639 Intergenic 5b ASSOCIATION 19584346 Aortic root size 7.69897000434 TCP1P3 - PDE3A LEAD_SNP rs10841496 chr12 20521654 Intergenic 4 ASSOCIATION 19478329 Male infertility 6.30102999566 PDE3A LEAD_SNP rs1348582 chr12 20531756 Intergenic 5a ASSOCIATION 20031603 QT interval 6.0 PDE3A FUNCTIONAL_SNP rs1444642 chr12 20548751 Intergenic 6 16995 CEU:1.0;0.862, CHB:1.0;0.623, JPT:0.869;0.711 FUNCTIONAL_SNP rs10841506 chr12 20552783 Intergenic 6 21027 CEU:0.922;0.85, CHB:1.0;0.69, JPT:0.847;0.59 LEAD_SNP rs11611208 chr12 20758613 Intergenic 7 ASSOCIATION 18391951 Height 5.69897000434 PDE3A LEAD_SNP rs10770705 chr12 20857467 Intergenic 7 ASSOCIATION 20881960 Height 17.096910013 SLCO1C1 FUNCTIONAL_SNP rs4430560 chr12 20809889 Intergenic 4 47578 CEU:0.955;0.806 FUNCTIONAL_SNP rs954865 chr12 20834162 Intergenic 4 23305 CEU:1.0;1.0, CHB:0.881;0.696, JPT:0.893;0.798 FUNCTIONAL_SNP rs11045388 chr12 20840721 Intergenic 5a 16746 CEU:1.0;1.0, CHB:0.879;0.691, JPT:0.884;0.781, YRI:0.859;0.648 FUNCTIONAL_SNP rs7138018 chr12 20835179 Intergenic 5b 22288 CEU:1.0;1.0, CHB:0.88;0.693, JPT:0.884;0.781 FUNCTIONAL_SNP rs10770687 chr12 20810511 Intergenic 5b 46956 CEU:1.0;0.92, YRI:0.872;0.53 FUNCTIONAL_SNP rs4485156 chr12 20813524 Intergenic 6 43943 CEU:1.0;0.846 FUNCTIONAL_SNP rs3809209 chr12 20837585 Intergenic 6 19882 CEU:1.0;0.848, CHB:0.784;0.614, JPT:0.893;0.798 FUNCTIONAL_SNP rs7135818 chr12 20829775 Intergenic 6 27692 CEU:1.0;0.959, YRI:0.872;0.53 FUNCTIONAL_SNP rs10734707 chr12 20856355 Intergenic 6 1112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.932 FUNCTIONAL_SNP rs10770690 chr12 20818476 Intergenic 7 38991 CEU:1.0;0.92, YRI:0.865;0.514 FUNCTIONAL_SNP rs10505868 chr12 20858285 Intergenic 7 818 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7978643 chr12 20840223 Intergenic 7 17244 CEU:1.0;1.0, CHB:0.866;0.663, JPT:0.814;0.663, YRI:0.858;0.688 FUNCTIONAL_SNP rs7305275 chr12 20834635 Intergenic 7 22832 CEU:1.0;1.0, CHB:0.881;0.696, JPT:0.893;0.798, YRI:0.872;0.53 FUNCTIONAL_SNP rs6487125 chr12 20804160 Intergenic 7 53307 CEU:0.955;0.806 FUNCTIONAL_SNP rs6487133 chr12 20845152 Intergenic 7 12315 CEU:1.0;1.0, CHB:0.881;0.696, JPT:0.893;0.798, YRI:0.875;0.646 FUNCTIONAL_SNP rs10743390 chr12 20856579 Intergenic 7 888 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.941 FUNCTIONAL_SNP rs7137534 chr12 20831777 Intergenic 7 25690 CEU:1.0;0.959, CHB:0.866;0.597, JPT:0.758;0.515, YRI:0.875;0.588 LEAD_SNP rs2117032 chr12 21074122 Intergenic 7 ASSOCIATION 19419973 Bilirubin levels 13.5228787453 SLCO1B3 - LST-3TM12 FUNCTIONAL_SNP rs10841712 chr12 21086383 Intergenic 6 12261 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1910196 chr12 21117213 Intergenic 7 43091 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10770763 chr12 21118456 Intergenic 7 44334 CEU:1.0;0.958, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4149056 chr12 21331549 Intergenic 7 ASSOCIATION 19414484 Serum bilirubin levels 12.15490196 SLCO1B1 ASSOCIATION 18650507 Response to statin therapy 8.69897000434 SLCO1B1 FUNCTIONAL_SNP rs2900478 chr12 21368797 Intergenic 6 37248 CEU:1.0;0.812, CHB:1.0;0.81, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4363657 chr12 21368722 Intergenic 6 ASSOCIATION 21646302 Bilirubin levels 7.30102999566 SLCO1B1 FUNCTIONAL_SNP rs7969341 chr12 21385604 Intergenic 6 16882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12366582 chr12 21391608 Intergenic 6 22886 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.952, YRI:1.0;0.87 FUNCTIONAL_SNP rs2900478 chr12 21368797 Intergenic 6 75 CEU:1.0;1.0 FUNCTIONAL_SNP rs1871395 chr12 21352315 Intergenic 7 16407 CEU:1.0;0.82, CHB:1.0;0.911, JPT:1.0;0.817, YRI:1.0;0.815 FUNCTIONAL_SNP rs12317268 chr12 21352541 Intergenic 7 16181 CEU:1.0;0.82, CHB:1.0;0.826, JPT:1.0;0.802, YRI:1.0;1.0 FUNCTIONAL_SNP rs11519068 chr12 21412443 Intergenic 7 43721 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.95, YRI:0.917;0.841 FUNCTIONAL_SNP rs2199680 chr12 21415496 Intergenic 7 46774 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.951, YRI:0.927;0.859 FUNCTIONAL_SNP rs4149056 chr12 21331549 Intergenic 7 37173 CEU:1.0;0.82 FUNCTIONAL_SNP rs4149081 chr12 21378021 Intergenic 7 9299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs12369881 chr12 21391352 Intergenic 7 22630 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.952, YRI:1.0;0.87 FUNCTIONAL_SNP rs11045879 chr12 21382619 Intergenic 7 13897 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs11045885 chr12 21386018 Intergenic 7 17296 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs11568563 chr12 21457434 Intergenic 6 ASSOCIATION 21685912 Progressive supranuclear palsy 7.15490195999 SLCO1A2 FUNCTIONAL_SNP rs7966334 chr12 21467215 Intergenic 7 9781 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10743430 chr12 22151573 Intergenic 7 ASSOCIATION 21116278 Entorhinal cortical thickness 6.22184874962 ABCC9 - CMAS FUNCTIONAL_SNP rs3983516 chr12 22126314 Intergenic 5a 25259 CEU:1.0;1.0 FUNCTIONAL_SNP rs4074274 chr12 22154874 Intergenic 6 3301 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10841921 chr12 22157911 Intergenic 6 6338 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4350408 chr12 22152713 Intergenic 6 1140 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1517274 chr12 22122233 Intergenic 6 29340 CEU:1.0;1.0 FUNCTIONAL_SNP rs4394882 chr12 22154008 Intergenic 7 2435 CEU:1.0;1.0 FUNCTIONAL_SNP rs11615766 chr12 22162540 Intergenic 7 10967 CEU:1.0;1.0 FUNCTIONAL_SNP rs9645737 chr12 22133906 Intergenic 7 17667 CEU:1.0;1.0, YRI:0.926;0.747 FUNCTIONAL_SNP rs1400619 chr12 22122383 Intergenic 7 29190 CEU:1.0;1.0 FUNCTIONAL_SNP rs11611076 chr12 22133274 Intergenic 7 18299 CEU:1.0;1.0 FUNCTIONAL_SNP rs11608784 chr12 22146889 Intergenic 7 4684 CEU:1.0;1.0 LEAD_SNP rs2216228 chr12 22365835 Intergenic 5b ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 5.39794000867 ST8SIA1 FUNCTIONAL_SNP rs976709 chr12 22368590 Intergenic 4 2755 CEU:1.0;1.0 FUNCTIONAL_SNP rs16924749 chr12 22362345 Intergenic 5b 3490 CEU:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs1345412 chr12 22366098 Intergenic 6 263 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.917, YRI:1.0;0.803 FUNCTIONAL_SNP rs16924787 chr12 22375718 Intergenic 7 9883 CEU:1.0;1.0 FUNCTIONAL_SNP rs11838002 chr12 22363639 Intergenic 7 2196 CEU:1.0;1.0 FUNCTIONAL_SNP rs2268858 chr12 22366655 Intergenic 7 820 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.861 FUNCTIONAL_SNP rs16924767 chr12 22369567 Intergenic 7 3732 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.952;0.906 LEAD_SNP rs7979575 chr12 24278821 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 5.69897000434 SOX5 FUNCTIONAL_SNP rs2030130 chr12 24274071 Intergenic 6 4750 CEU:1.0;0.927, CHB:1.0;0.928, JPT:1.0;0.817, YRI:0.95;0.657 FUNCTIONAL_SNP rs2030129 chr12 24275387 Intergenic 7 3434 CEU:1.0;0.927, CHB:1.0;0.928, JPT:1.0;0.79, YRI:0.954;0.653 LEAD_SNP rs1464500 chr12 24389660 Intergenic 5b ASSOCIATION 20195266 Response to antipsychotic treatment 7.0 SOX5 LEAD_SNP rs1522232 chr12 24394372 Intergenic 7 ASSOCIATION 19754311 AIDS 5.69897000434 SOX5 FUNCTIONAL_SNP rs2030510 chr12 24395202 Intergenic 5b 830 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs2728834 chr12 24390304 Intergenic 7 4068 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;0.96 LEAD_SNP rs17287293 chr12 24770878 Intergenic 6 ASSOCIATION 20639392 Resting heart rate 9.69897000434 C12orf67 - RPL21P102 FUNCTIONAL_SNP rs4963779 chr12 24800775 Intergenic 7 29897 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4963778 chr12 24800607 Intergenic 7 29729 CEU:1.0;0.856, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4246224 chr12 24784139 Intergenic 7 13261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11047543 chr12 24788339 Intergenic 7 17461 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10842383 chr12 24771967 Intergenic 7 1089 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs11047543 chr12 24788339 Intergenic 7 ASSOCIATION 20062060 PR interval 12.5228787453 C12orf67 - RPL21P102 FUNCTIONAL_SNP rs17287293 chr12 24770878 Intergenic 6 17461 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4963778 chr12 24800607 Intergenic 7 12268 CEU:1.0;0.856, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4963779 chr12 24800775 Intergenic 7 12436 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4246224 chr12 24784139 Intergenic 7 4200 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10842383 chr12 24771967 Intergenic 7 16372 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs718314 chr12 26453283 Intergenic 7 ASSOCIATION 20935629 Waist-hip ratio 16.6989700043 SSPN - ITPR2 FUNCTIONAL_SNP rs7132434 chr12 26472562 Intergenic 2b 19279 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10842707 chr12 26471364 Intergenic 2b 18081 CEU:1.0;1.0 FUNCTIONAL_SNP rs4963975 chr12 26443030 Intergenic 4 10253 CEU:1.0;1.0, CHB:1.0;0.933, JPT:0.929;0.595 FUNCTIONAL_SNP rs10743579 chr12 26461145 Intergenic 5a 7862 CEU:1.0;1.0, CHB:1.0;0.919, JPT:0.862;0.697 FUNCTIONAL_SNP rs12814794 chr12 26440698 Intergenic 5b 12585 CEU:1.0;1.0, CHB:0.924;0.794, JPT:0.931;0.628 FUNCTIONAL_SNP rs11048456 chr12 26463082 Intergenic 6 9799 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;0.944 FUNCTIONAL_SNP rs1027087 chr12 26470850 Intergenic 7 17567 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs10842708 chr12 26474867 Intergenic 7 21584 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10842703 chr12 26456188 Intergenic 7 2905 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2137564 chr12 26473350 Intergenic 7 20067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.885, YRI:1.0;0.552 FUNCTIONAL_SNP rs1872992 chr12 26457190 Intergenic 7 3907 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1463679 chr12 26470169 Intergenic 7 16886 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846 LEAD_SNP rs2306677 chr12 26636386 Intergenic 7 ASSOCIATION 17827064 Amyotrophic lateral sclerosis 5.52287874528 ITPR2 FUNCTIONAL_SNP rs7979933 chr12 26632243 Intergenic 6 4143 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10128958 chr12 26639510 Intergenic 7 3124 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs905298 chr12 26641933 Intergenic 7 5547 CEU:1.0;0.879, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs522958 chr12 28228567 Intergenic 6 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 6.0 PTHLH - CCDC91 ASSOCIATION 18821565 Hyperactive-impulsive symptoms 6.09691001301 PTHLH - CCDC91 FUNCTIONAL_SNP rs526490 chr12 28228025 Intergenic 7 542 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2638953 chr12 28534415 Intergenic 7 ASSOCIATION 20881960 Height 16.15490196 CCDC91 FUNCTIONAL_SNP rs10506037 chr12 28651146 Intergenic 2a 116731 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843191 chr12 28660527 Intergenic 2b 126112 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049669 chr12 28651915 Intergenic 2b 117500 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1511549 chr12 28731901 Intergenic 3a 197486 CEU:0.915;0.804, JPT:1.0;1.0 FUNCTIONAL_SNP rs1355473 chr12 28616565 Intergenic 3a 82150 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843143 chr12 28406417 Intergenic 4 127998 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843184 chr12 28626272 Intergenic 4 91857 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11519331 chr12 28362928 Intergenic 4 171487 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1355474 chr12 28616532 Intergenic 4 82117 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7307078 chr12 28337578 Intergenic 4 196837 CEU:0.955;0.803, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12370271 chr12 28466773 Intergenic 4 67642 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843150 chr12 28457802 Intergenic 5a 76613 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843140 chr12 28380206 Intergenic 5a 154209 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049518 chr12 28456661 Intergenic 5a 77754 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843195 chr12 28666566 Intergenic 5a 132151 CEU:0.917;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843196 chr12 28666593 Intergenic 5a 132178 CEU:0.917;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7139060 chr12 28693144 Intergenic 5a 158729 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.789;0.597 FUNCTIONAL_SNP rs11049678 chr12 28658479 Intergenic 5a 124064 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843185 chr12 28626711 Intergenic 5a 92296 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049621 chr12 28609007 Intergenic 5a 74592 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.953;0.83 FUNCTIONAL_SNP rs7313862 chr12 28611779 Intergenic 5a 77364 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.853;0.611 FUNCTIONAL_SNP rs10771432 chr12 28660731 Intergenic 5a 126316 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.873;0.677 FUNCTIONAL_SNP rs12371974 chr12 28466902 Intergenic 5b 67513 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049511 chr12 28447326 Intergenic 5b 87089 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843178 chr12 28613434 Intergenic 5b 79019 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049524 chr12 28464889 Intergenic 5b 69526 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049533 chr12 28480404 Intergenic 5b 54011 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049537 chr12 28484172 Intergenic 5b 50243 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs11049543 chr12 28495057 Intergenic 5b 39358 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7306838 chr12 28337382 Intergenic 5b 197033 CEU:0.955;0.803, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049570 chr12 28543151 Intergenic 5b 8736 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049630 chr12 28613173 Intergenic 5b 78758 CEU:0.958;0.918, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049653 chr12 28632815 Intergenic 5b 98400 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049679 chr12 28661094 Intergenic 5b 126679 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10506038 chr12 28659172 Intergenic 5b 124757 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7969086 chr12 28660206 Intergenic 5b 125791 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.824 FUNCTIONAL_SNP rs17433981 chr12 28546567 Intergenic 5b 12152 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7957382 chr12 28356576 Intergenic 5b 177839 CEU:0.955;0.803, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843133 chr12 28358504 Intergenic 5b 175911 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843153 chr12 28472101 Intergenic 6 62314 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2141203 chr12 28614861 Intergenic 6 80446 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843159 chr12 28507530 Intergenic 6 26885 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843172 chr12 28605233 Intergenic 6 70818 CEU:1.0;0.844, JPT:1.0;0.545 FUNCTIONAL_SNP rs10843179 chr12 28615058 Intergenic 6 80643 CEU:0.956;0.84, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843180 chr12 28615154 Intergenic 6 80739 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843186 chr12 28635854 Intergenic 6 101439 CEU:0.955;0.839, CHB:1.0;1.0 FUNCTIONAL_SNP rs11049540 chr12 28490892 Intergenic 6 43523 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049556 chr12 28518559 Intergenic 6 15856 CEU:0.954;0.835, CHB:1.0;0.659, JPT:1.0;0.863 FUNCTIONAL_SNP rs2272361 chr12 28602970 Intergenic 6 68555 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.867;0.596 FUNCTIONAL_SNP rs11049583 chr12 28570171 Intergenic 6 35756 CEU:0.958;0.849, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049586 chr12 28570961 Intergenic 6 36546 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6487669 chr12 28363760 Intergenic 6 170655 CEU:0.957;0.813 FUNCTIONAL_SNP rs11049594 chr12 28583301 Intergenic 6 48886 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3911810 chr12 28614602 Intergenic 6 80187 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049608 chr12 28598461 Intergenic 6 64046 CEU:0.955;0.838, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049615 chr12 28605085 Intergenic 6 70670 CEU:1.0;0.881, JPT:1.0;0.545 FUNCTIONAL_SNP rs11049620 chr12 28607631 Intergenic 6 73216 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049521 chr12 28463909 Intergenic 6 70506 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049622 chr12 28610570 Intergenic 6 76155 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049632 chr12 28614063 Intergenic 6 79648 CEU:0.917;0.807, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12371059 chr12 28528308 Intergenic 6 6107 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049668 chr12 28650613 Intergenic 6 116198 CEU:0.917;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2348235 chr12 28566952 Intergenic 6 32537 CEU:1.0;0.841, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1355475 chr12 28635331 Intergenic 6 100916 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049438 chr12 28349138 Intergenic 6 185277 CEU:0.957;0.844, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12369144 chr12 28494042 Intergenic 6 40373 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049514 chr12 28452394 Intergenic 6 82021 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049685 chr12 28665708 Intergenic 6 131293 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.702 FUNCTIONAL_SNP rs11049525 chr12 28466160 Intergenic 6 68255 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12367657 chr12 28628749 Intergenic 6 94334 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1841962 chr12 28373852 Intergenic 6 160563 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.809;0.625 FUNCTIONAL_SNP rs10506032 chr12 28537110 Intergenic 6 2695 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10506034 chr12 28595296 Intergenic 6 60881 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049569 chr12 28539756 Intergenic 6 5341 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs11049527 chr12 28470600 Intergenic 6 63815 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049528 chr12 28470847 Intergenic 6 63568 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049531 chr12 28475730 Intergenic 6 58685 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1534340 chr12 28668483 Intergenic 6 134068 CEU:0.952;0.866, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2172299 chr12 28433113 Intergenic 6 101302 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7980441 chr12 28367681 Intergenic 6 166734 CEU:0.955;0.804, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11513465 chr12 28362416 Intergenic 6 171999 CEU:0.955;0.874, CHB:1.0;0.657, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049475 chr12 28392664 Intergenic 6 141751 CEU:0.956;0.875, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049420 chr12 28346112 Intergenic 6 188303 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049470 chr12 28374382 Intergenic 6 160033 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843146 chr12 28421285 Intergenic 7 113130 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843138 chr12 28372143 Intergenic 7 162272 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;0.864 FUNCTIONAL_SNP rs10843152 chr12 28472023 Intergenic 7 62392 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843154 chr12 28479757 Intergenic 7 54658 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843157 chr12 28499350 Intergenic 7 35065 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843158 chr12 28507192 Intergenic 7 27223 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3926041 chr12 28614709 Intergenic 7 80294 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843162 chr12 28563918 Intergenic 7 29503 CEU:0.957;0.844, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843163 chr12 28568474 Intergenic 7 34059 CEU:0.958;0.847, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843164 chr12 28569714 Intergenic 7 35299 CEU:0.958;0.849, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049517 chr12 28454560 Intergenic 7 79855 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843167 chr12 28582793 Intergenic 7 48378 CEU:0.958;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843169 chr12 28582984 Intergenic 7 48569 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049507 chr12 28442487 Intergenic 7 91928 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;0.864 FUNCTIONAL_SNP rs11049509 chr12 28442988 Intergenic 7 91427 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843177 chr12 28610670 Intergenic 7 76255 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7967281 chr12 28550776 Intergenic 7 16361 CEU:1.0;0.885 FUNCTIONAL_SNP rs10843189 chr12 28659918 Intergenic 7 125503 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049526 chr12 28467684 Intergenic 7 66731 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843192 chr12 28661689 Intergenic 7 127274 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.824 FUNCTIONAL_SNP rs10843194 chr12 28663170 Intergenic 7 128755 CEU:0.916;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049538 chr12 28488734 Intergenic 7 45681 CEU:1.0;0.876, CHB:1.0;0.657, JPT:1.0;0.863 FUNCTIONAL_SNP rs11049545 chr12 28497898 Intergenic 7 36517 CEU:1.0;0.879, CHB:1.0;0.658, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049549 chr12 28510741 Intergenic 7 23674 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049485 chr12 28405455 Intergenic 7 128960 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3825246 chr12 28463119 Intergenic 7 71296 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4357727 chr12 28444922 Intergenic 7 89493 CEU:1.0;0.89, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049488 chr12 28412372 Intergenic 7 122043 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049572 chr12 28550201 Intergenic 7 15786 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049582 chr12 28569325 Intergenic 7 34910 CEU:0.958;0.847, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049585 chr12 28570890 Intergenic 7 36475 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843155 chr12 28487853 Intergenic 7 46562 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6487671 chr12 28363835 Intergenic 7 170580 CEU:0.957;0.811, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7964793 chr12 28451709 Intergenic 7 82706 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.856;0.616 FUNCTIONAL_SNP rs1511550 chr12 28637115 Intergenic 7 102700 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049600 chr12 28591994 Intergenic 7 57579 CEU:0.958;0.849, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049604 chr12 28596025 Intergenic 7 61610 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs11049605 chr12 28596065 Intergenic 7 61650 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049606 chr12 28597146 Intergenic 7 62731 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;0.864 FUNCTIONAL_SNP rs7973516 chr12 28360456 Intergenic 7 173959 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049617 chr12 28606277 Intergenic 7 71862 CEU:0.957;0.844, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049618 chr12 28606304 Intergenic 7 71889 CEU:0.957;0.844, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049619 chr12 28606428 Intergenic 7 72013 CEU:0.958;0.849, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9645730 chr12 28470084 Intergenic 7 64331 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049635 chr12 28617226 Intergenic 7 82811 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049646 chr12 28629072 Intergenic 7 94657 CEU:0.916;0.806, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049471 chr12 28381192 Intergenic 7 153223 CEU:0.955;0.803, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049656 chr12 28634638 Intergenic 7 100223 CEU:0.916;0.839, CHB:1.0;0.658, JPT:1.0;0.846 FUNCTIONAL_SNP rs11049658 chr12 28634863 Intergenic 7 100448 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049670 chr12 28652275 Intergenic 7 117860 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12320545 chr12 28400980 Intergenic 7 133435 CEU:0.958;0.849, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.896;0.589 FUNCTIONAL_SNP rs11049677 chr12 28658039 Intergenic 7 123624 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049680 chr12 28661369 Intergenic 7 126954 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049472 chr12 28382705 Intergenic 7 151710 CEU:0.947;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7971033 chr12 28361353 Intergenic 7 173062 CEU:0.95;0.822, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049693 chr12 28677944 Intergenic 7 143529 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.938;0.745 FUNCTIONAL_SNP rs11049681 chr12 28661655 Intergenic 7 127240 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7485676 chr12 28663667 Intergenic 7 129252 CEU:0.916;0.806, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10843181 chr12 28615757 Intergenic 7 81342 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049710 chr12 28699164 Intergenic 7 164749 CEU:0.954;0.803, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049515 chr12 28452497 Intergenic 7 81918 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049516 chr12 28452582 Intergenic 7 81833 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17432330 chr12 28445269 Intergenic 7 89146 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10506029 chr12 28473235 Intergenic 7 61180 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049474 chr12 28388445 Intergenic 7 145970 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12366617 chr12 28548659 Intergenic 7 14244 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049520 chr12 28463589 Intergenic 7 70826 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7974701 chr12 28348512 Intergenic 7 185903 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10506033 chr12 28567965 Intergenic 7 33550 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10506035 chr12 28611092 Intergenic 7 76677 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10506036 chr12 28650565 Intergenic 7 116150 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7961407 chr12 28348415 Intergenic 7 186000 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049530 chr12 28475153 Intergenic 7 59262 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11519330 chr12 28362653 Intergenic 7 171762 CEU:0.957;0.813 FUNCTIONAL_SNP rs11049532 chr12 28476912 Intergenic 7 57503 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049682 chr12 28661995 Intergenic 7 127580 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7973241 chr12 28360516 Intergenic 7 173899 CEU:0.955;0.803, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11494780 chr12 28555202 Intergenic 7 20787 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs716687 chr12 28414450 Intergenic 7 119965 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049541 chr12 28494714 Intergenic 7 39701 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049627 chr12 28612322 Intergenic 7 77907 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049629 chr12 28612789 Intergenic 7 78374 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049419 chr12 28345884 Intergenic 7 188531 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049421 chr12 28346257 Intergenic 7 188158 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10771411 chr12 28371672 Intergenic 7 162743 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049429 chr12 28347265 Intergenic 7 187150 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049634 chr12 28614229 Intergenic 7 79814 CEU:0.956;0.84, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049439 chr12 28349302 Intergenic 7 185113 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12372448 chr12 28446889 Intergenic 7 87526 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049460 chr12 28358954 Intergenic 7 175461 CEU:0.954;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049464 chr12 28364570 Intergenic 7 169845 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049567 chr12 28538435 Intergenic 7 4020 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11049468 chr12 28368617 Intergenic 7 165798 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2046383 chr12 30104142 Intergenic 7 ASSOCIATION 20445134 Heart failure 5.52287874528 RPL21P99 - IPO8 FUNCTIONAL_SNP rs10771609 chr12 30104282 Intergenic 5b 140 CEU:1.0;0.813, CHB:1.0;0.896, JPT:1.0;0.724 LEAD_SNP rs1463605 chr12 30113883 Intergenic 7 ASSOCIATION 17903295 Aging traits 7.15490195999 RPL21P99 - IPO8 LEAD_SNP rs10844154 chr12 32380501 Intergenic 7 ASSOCIATION 20709820 Emphysema-related traits 6.22184874962 BICD1 ASSOCIATION 19851299 Weight 5.39794000867 BICD1 FUNCTIONAL_SNP rs161973 chr12 32371865 Intergenic 7 8636 CEU:1.0;0.953, YRI:0.946;0.632 LEAD_SNP rs708224 chr12 32436409 Intergenic 7 ASSOCIATION 20686608 Pancreatic cancer 6.52287874528 BICD1 FUNCTIONAL_SNP rs1239402 chr12 32440167 Intergenic 6 3758 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 LEAD_SNP rs261902 chr12 32476727 Intergenic 6 ASSOCIATION 19010793 Normalized brain volume 5.39794000867 BICD1 FUNCTIONAL_SNP rs261903 chr12 32475822 Intergenic 5b 905 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs261889 chr12 32480056 Intergenic 7 3329 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs261901 chr12 32476906 Intergenic 7 179 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9300212 chr12 33701166 Intergenic 7 ASSOCIATION 17903297 Cognitive test performance 5.09691001301 ST13P9 - ALG10 FUNCTIONAL_SNP rs10444398 chr12 33701333 Intergenic 6 167 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.887 FUNCTIONAL_SNP rs6488170 chr12 33702068 Intergenic 7 902 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6582630 chr12 38743508 Intergenic 4 ASSOCIATION 19483685 Drug-induced liver injury (flucloxacillin) 6.0 ALG10B - CPNE8 FUNCTIONAL_SNP rs4882284 chr12 38710459 Intergenic 4 33049 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2387843 chr12 38711203 Intergenic 5a 32305 CEU:1.0;0.903, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.942 FUNCTIONAL_SNP rs10748433 chr12 38696352 Intergenic 6 47156 CEU:1.0;0.882, CHB:1.0;0.904, JPT:1.0;0.877, YRI:1.0;1.0 FUNCTIONAL_SNP rs10748446 chr12 38745270 Intergenic 6 1762 CEU:0.957;0.879, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1973292 chr12 38679626 Intergenic 6 63882 CEU:1.0;0.909, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1817649 chr12 38682351 Intergenic 6 61157 CEU:1.0;0.905, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;0.934 FUNCTIONAL_SNP rs4550281 chr12 38689937 Intergenic 6 53571 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7301258 chr12 38706942 Intergenic 6 36566 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.873 FUNCTIONAL_SNP rs1843876 chr12 38708549 Intergenic 6 34959 CEU:0.957;0.844, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1813392 chr12 38692203 Intergenic 6 51305 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1825806 chr12 38692547 Intergenic 7 50961 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1825808 chr12 38736725 Intergenic 7 6783 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7977200 chr12 38713745 Intergenic 7 29763 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10785590 chr12 38694145 Intergenic 7 49363 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.941;0.886 LEAD_SNP rs1994090 chr12 40428561 Intergenic 7 ASSOCIATION 19915576 Parkinson's disease 7.52287874528 SLC2A13 LEAD_SNP rs11175593 chr12 40601940 Intergenic 7 ASSOCIATION 18587394 Crohn's disease 9.52287874528 RPL30P13 - LRRK2 LEAD_SNP rs1491942 chr12 40620808 Intergenic 3a ASSOCIATION 21292315 Parkinson's disease 13.2218487496 LRRK2 LEAD_SNP rs34637584 chr12 40734202 Intergenic 7 ASSOCIATION 21738487 Parkinson's disease 27.6989700043 LRRK2 LEAD_SNP rs11564258 chr12 40792300 Intergenic 7 ASSOCIATION 21102463 Crohn's disease 20.2218487496 MUC19 FUNCTIONAL_SNP rs12427245 chr12 40707113 Intergenic 2b 85187 CEU:1.0;1.0 FUNCTIONAL_SNP rs11564169 chr12 40826021 Intergenic 5a 33721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564238 chr12 40827822 Intergenic 5a 35522 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564241 chr12 40825217 Intergenic 5a 32917 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564242 chr12 40825108 Intergenic 5a 32808 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4628750 chr12 40670056 Intergenic 5a 122244 CEU:1.0;1.0 FUNCTIONAL_SNP rs12422527 chr12 40768905 Intergenic 5a 23395 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs10506160 chr12 40825715 Intergenic 5a 33415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17444903 chr12 40821745 Intergenic 5b 29445 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1388597 chr12 40618097 Intergenic 5b 174203 CEU:1.0;1.0 FUNCTIONAL_SNP rs17466969 chr12 40786828 Intergenic 5b 5472 CEU:1.0;1.0 FUNCTIONAL_SNP rs11176553 chr12 40815560 Intergenic 5b 23260 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564210 chr12 40634819 Intergenic 5b 157481 CEU:1.0;1.0 FUNCTIONAL_SNP rs11564266 chr12 40750195 Intergenic 5b 42105 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs971615 chr12 40792703 Intergenic 5b 403 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17466738 chr12 40772751 Intergenic 5b 19549 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs4768260 chr12 40814852 Intergenic 6 22552 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17466626 chr12 40760631 Intergenic 6 31669 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17444966 chr12 40827891 Intergenic 6 35591 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564145 chr12 40811665 Intergenic 6 19365 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2017917 chr12 40793899 Intergenic 6 1599 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12422796 chr12 40646534 Intergenic 6 145766 CEU:1.0;1.0 FUNCTIONAL_SNP rs17492152 chr12 40807727 Intergenic 6 15427 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17467081 chr12 40804533 Intergenic 6 12233 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11564237 chr12 40828019 Intergenic 6 35719 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17484493 chr12 40740873 Intergenic 6 51427 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0 FUNCTIONAL_SNP rs17467102 chr12 40806594 Intergenic 6 14294 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564259 chr12 40792197 Intergenic 6 103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7487209 chr12 40812310 Intergenic 6 20010 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1365762 chr12 40789962 Intergenic 6 2338 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17444751 chr12 40807930 Intergenic 6 15630 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs971616 chr12 40792856 Intergenic 6 556 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12424424 chr12 40807129 Intergenic 6 14829 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17444744 chr12 40807876 Intergenic 6 15576 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11176849 chr12 40885406 Intergenic 6 93106 CEU:1.0;1.0 FUNCTIONAL_SNP rs10506154 chr12 40731013 Intergenic 6 61287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10506163 chr12 40827081 Intergenic 6 34781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12425677 chr12 40818450 Intergenic 6 26150 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12425211 chr12 40816744 Intergenic 6 24444 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4768254 chr12 40808799 Intergenic 6 16499 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4768258 chr12 40814584 Intergenic 7 22284 CEU:1.0;1.0 FUNCTIONAL_SNP rs4768259 chr12 40814661 Intergenic 7 22361 CEU:1.0;1.0 FUNCTIONAL_SNP rs2114566 chr12 40814107 Intergenic 7 21807 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs28365229 chr12 40727145 Intergenic 7 65155 CEU:1.0;1.0 FUNCTIONAL_SNP rs3789329 chr12 40760764 Intergenic 7 31536 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs17466907 chr12 40784574 Intergenic 7 7726 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0 FUNCTIONAL_SNP rs17467144 chr12 40810161 Intergenic 7 17861 CEU:1.0;1.0, CHB:1.0;0.79 FUNCTIONAL_SNP rs11564104 chr12 40826535 Intergenic 7 34235 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564107 chr12 40609750 Intergenic 7 182550 CEU:1.0;1.0 FUNCTIONAL_SNP rs11564111 chr12 40823218 Intergenic 7 30918 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564114 chr12 40825335 Intergenic 7 33035 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3909731 chr12 40791930 Intergenic 7 370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564126 chr12 40820001 Intergenic 7 27701 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5015149 chr12 40812494 Intergenic 7 20194 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564143 chr12 40821435 Intergenic 7 29135 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564144 chr12 40817995 Intergenic 7 25695 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564152 chr12 40654873 Intergenic 7 137427 CEU:1.0;1.0 FUNCTIONAL_SNP rs11564153 chr12 40634991 Intergenic 7 157309 CEU:1.0;1.0 FUNCTIONAL_SNP rs12426903 chr12 40801530 Intergenic 7 9230 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564185 chr12 40650717 Intergenic 7 141583 CEU:1.0;1.0 FUNCTIONAL_SNP rs11564187 chr12 40634203 Intergenic 7 158097 CEU:1.0;1.0 FUNCTIONAL_SNP rs17467039 chr12 40797038 Intergenic 7 4738 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17466016 chr12 40667663 Intergenic 7 124637 CEU:1.0;1.0 FUNCTIONAL_SNP rs11175593 chr12 40601940 Intergenic 7 190360 CEU:1.0;1.0 FUNCTIONAL_SNP rs11564209 chr12 40650875 Intergenic 7 141425 CEU:1.0;1.0 FUNCTIONAL_SNP rs11564236 chr12 40828306 Intergenic 7 36006 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564240 chr12 40825542 Intergenic 7 33242 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564244 chr12 40824376 Intergenic 7 32076 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564246 chr12 40822346 Intergenic 7 30046 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564247 chr12 40821478 Intergenic 7 29178 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564248 chr12 40820570 Intergenic 7 28270 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564249 chr12 40820403 Intergenic 7 28103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564250 chr12 40819724 Intergenic 7 27424 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4767965 chr12 40592340 Intergenic 7 199960 CEU:1.0;1.0 FUNCTIONAL_SNP rs11564255 chr12 40805147 Intergenic 7 12847 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564256 chr12 40798413 Intergenic 7 6113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17467088 chr12 40804713 Intergenic 7 12413 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564262 chr12 40790924 Intergenic 7 1376 CEU:1.0;1.0 FUNCTIONAL_SNP rs11564264 chr12 40790530 Intergenic 7 1770 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17467116 chr12 40806737 Intergenic 7 14437 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11564271 chr12 40673524 Intergenic 7 118776 CEU:1.0;1.0 FUNCTIONAL_SNP rs12422390 chr12 40803129 Intergenic 7 10829 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17467137 chr12 40809502 Intergenic 7 17202 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3751174 chr12 40952143 Intergenic 7 159843 CEU:1.0;1.0 FUNCTIONAL_SNP rs17444103 chr12 40721159 Intergenic 7 71141 CEU:1.0;1.0 FUNCTIONAL_SNP rs1365768 chr12 40755215 Intergenic 7 37085 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1365769 chr12 40755289 Intergenic 7 37011 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17443600 chr12 40658867 Intergenic 7 133433 CEU:1.0;1.0 FUNCTIONAL_SNP rs17467157 chr12 40813815 Intergenic 7 21515 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17444646 chr12 40797205 Intergenic 7 4905 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12424494 chr12 40777658 Intergenic 7 14642 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11564253 chr12 40809750 Intergenic 7 17450 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12423986 chr12 40803194 Intergenic 7 10894 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17444667 chr12 40799277 Intergenic 7 6977 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0 FUNCTIONAL_SNP rs17461575 chr12 40609580 Intergenic 7 182720 CEU:1.0;1.0 FUNCTIONAL_SNP rs17443656 chr12 40666737 Intergenic 7 125563 CEU:1.0;1.0 FUNCTIONAL_SNP rs17467213 chr12 40820124 Intergenic 7 27824 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17444688 chr12 40804093 Intergenic 7 11793 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs971617 chr12 40792977 Intergenic 7 677 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17445098 chr12 40839382 Intergenic 7 47082 CEU:1.0;1.0 FUNCTIONAL_SNP rs12427134 chr12 40807097 Intergenic 7 14797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12426639 chr12 40745777 Intergenic 7 46523 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10506147 chr12 40599398 Intergenic 7 192902 CEU:1.0;1.0 FUNCTIONAL_SNP rs1463717 chr12 40647645 Intergenic 7 144655 CEU:1.0;1.0 FUNCTIONAL_SNP rs10506157 chr12 40823493 Intergenic 7 31193 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs10506158 chr12 40824154 Intergenic 7 31854 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10506159 chr12 40824948 Intergenic 7 32648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10506161 chr12 40826322 Intergenic 7 34022 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3899331 chr12 40794293 Intergenic 7 1993 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12425678 chr12 40818462 Intergenic 7 26162 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7485401 chr12 40812207 Intergenic 7 19907 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4768226 chr12 40688497 Intergenic 7 103803 CEU:1.0;1.0 FUNCTIONAL_SNP rs17444840 chr12 40819949 Intergenic 7 27649 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4768248 chr12 40796286 Intergenic 7 3986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4768249 chr12 40796334 Intergenic 7 4034 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4768251 chr12 40796365 Intergenic 7 4065 CEU:1.0;1.0 LEAD_SNP rs1880887 chr12 41721430 Intergenic 5b ASSOCIATION 18464913 Protein quantitative trait loci 10.0 CNTN1 - PDZRN4 FUNCTIONAL_SNP rs1880889 chr12 41721235 Intergenic 7 195 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1458175 chr12 41965861 Intergenic 7 ASSOCIATION 19010793 Multiple sclerosis 5.69897000434 PDZRN4 FUNCTIONAL_SNP rs7975094 chr12 41962908 Intergenic 6 2953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs871392 chr12 42171982 Intergenic 5b ASSOCIATION 19260141 Biochemical measures 5.52287874528 PDZRN4 - GXYLT1 FUNCTIONAL_SNP rs10880158 chr12 42167509 Intergenic 6 4473 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2731006 chr12 43160825 Intergenic 5b ASSOCIATION 19165232 Panic disorder 5.39794000867 RPS27P21 - MRPS36P5 LEAD_SNP rs1520832 chr12 43253415 Intergenic 5b ASSOCIATION 20445134 Heart failure 6.0 RPS27P21 - MRPS36P5 FUNCTIONAL_SNP rs1033264 chr12 43251518 Intergenic 6 1897 CEU:1.0;1.0 FUNCTIONAL_SNP rs2407117 chr12 43219273 Intergenic 6 34142 CEU:1.0;1.0 FUNCTIONAL_SNP rs2037411 chr12 43248672 Intergenic 7 4743 CEU:1.0;1.0 FUNCTIONAL_SNP rs908665 chr12 43217939 Intergenic 7 35476 CEU:1.0;1.0 LEAD_SNP rs1373549 chr12 46485838 Intergenic 7 ASSOCIATION 19668339 Hippocampal atrophy 5.09691001301 RPL13AP21 - SLC38A1 LEAD_SNP rs11610206 chr12 47639526 Intergenic 4 ASSOCIATION 19118814 Alzheimer's disease 6.52287874528 FAM113B - RPAP3 LEAD_SNP rs7138803 chr12 50247468 Intergenic 6 ASSOCIATION 20935630 Body mass index 16.6989700043 BCDIN3D - RPL35AP28 ASSOCIATION 19557197 Waist circumference 6.09691001301 BCDIN3D - RPL35AP28 ASSOCIATION 19079260 Body mass index 7.0 BCDIN3D - RPL35AP28 ASSOCIATION 19079260 Weight 6.69897000434 BCDIN3D - RPL35AP28 FUNCTIONAL_SNP rs7132908 chr12 50263148 Intergenic 4 15680 CEU:1.0;0.924, JPT:0.803;0.5, YRI:0.773;0.52 FUNCTIONAL_SNP rs10875980 chr12 50244767 Intergenic 5b 2701 CEU:1.0;0.855, CHB:1.0;0.667, JPT:1.0;0.713 FUNCTIONAL_SNP rs10875982 chr12 50245706 Intergenic 6 1762 CEU:1.0;0.855, CHB:1.0;0.667, JPT:1.0;0.748 FUNCTIONAL_SNP rs11169176 chr12 50241013 Intergenic 7 6455 CEU:1.0;0.849, CHB:0.869;0.555, JPT:1.0;0.748 LEAD_SNP rs11169552 chr12 51155663 Intergenic 3a ASSOCIATION 20972440 Colorectal cancer 9.69897000434 DIP2B - ATF1 FUNCTIONAL_SNP rs4768922 chr12 51179340 Intergenic 5b 23677 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3809319 chr12 51173733 Intergenic 5b 18070 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11169560 chr12 51185764 Intergenic 6 30101 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10876095 chr12 51202862 Intergenic 6 47199 CEU:1.0;0.94, CHB:1.0;0.94, JPT:1.0;1.0 FUNCTIONAL_SNP rs4768866 chr12 51156580 Intergenic 6 917 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10876096 chr12 51203953 Intergenic 7 48290 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11169544 chr12 51144749 Intergenic 7 10914 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11169561 chr12 51185950 Intergenic 7 30287 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4768924 chr12 51218114 Intergenic 7 62451 CEU:0.927;0.802, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4768925 chr12 51218323 Intergenic 7 62660 CEU:1.0;0.929, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1344958 chr12 51197717 Intergenic 7 42054 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10783389 chr12 51190606 Intergenic 7 34943 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10876097 chr12 51209636 Intergenic 7 53973 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17291650 chr12 51213433 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 6.52287874528 ATF1 LEAD_SNP rs12304921 chr12 51357542 Intergenic 6 ASSOCIATION 17554300 Type 2 diabetes 5.15490195999 HIGD1C FUNCTIONAL_SNP rs4768941 chr12 51355601 Intergenic 5b 1941 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12304878 chr12 51353851 Intergenic 5b 3691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12318464 chr12 51357346 Intergenic 7 196 CEU:0.937;0.878, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12306808 chr12 51354803 Intergenic 7 2739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17126180 chr12 52263956 Intergenic 5b ASSOCIATION 21107309 Reasoning 6.04575749056 FIGNL2 - ANKRD33 LEAD_SNP rs902774 chr12 53273904 Intergenic 2a ASSOCIATION 21743057 Prostate cancer 8.30102999566 KRT78 - RPL7P41 FUNCTIONAL_SNP rs17746508 chr12 53273085 Intergenic 4 819 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs902772 chr12 53273773 Intergenic 4 131 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4919707 chr12 53289648 Intergenic 4 15744 CEU:1.0;0.906 FUNCTIONAL_SNP rs4919743 chr12 53309584 Intergenic 4 35680 CEU:1.0;0.907 FUNCTIONAL_SNP rs17120257 chr12 53303331 Intergenic 5b 29427 CEU:1.0;0.907 FUNCTIONAL_SNP rs4919742 chr12 53272964 Intergenic 5b 940 CEU:1.0;0.906 FUNCTIONAL_SNP rs7301750 chr12 53274727 Intergenic 7 823 CEU:1.0;1.0, JPT:1.0;0.741, YRI:1.0;1.0 LEAD_SNP rs2016266 chr12 53727955 Intron 7 ASSOCIATION 19801982 Bone mineral density (spine) 8.0 SP7 FUNCTIONAL_SNP rs1110720 chr12 53682326 Coding 5b 45629 CEU:1.0;0.919, CHB:0.918;0.728 FUNCTIONAL_SNP rs6580942 chr12 53662624 Coding 4 65331 CEU:0.914;0.835 FUNCTIONAL_SNP rs1318648 chr12 53670545 Coding 5b 57410 CEU:0.913;0.833, CHB:0.924;0.794 FUNCTIONAL_SNP rs1056692 chr12 53687387 Exon,non-coding 7 40568 CEU:0.956;0.876 FUNCTIONAL_SNP rs6580941 chr12 53662199 Intron 2b 65756 CEU:0.914;0.835 FUNCTIONAL_SNP rs4759021 chr12 53714868 Intron 4 13087 CEU:0.954;0.835 FUNCTIONAL_SNP rs10876433 chr12 53734114 Intergenic 4 6159 CEU:1.0;0.917 FUNCTIONAL_SNP rs10876432 chr12 53731891 Intergenic 4 3936 CEU:1.0;0.917 FUNCTIONAL_SNP rs1976938 chr12 53661925 Intergenic 4 66030 CEU:0.914;0.835 FUNCTIONAL_SNP rs2886129 chr12 53731984 Intergenic 4 4029 CEU:1.0;0.917 FUNCTIONAL_SNP rs10783575 chr12 53742885 Intergenic 5a 14930 CEU:1.0;0.917 FUNCTIONAL_SNP rs11170496 chr12 53666195 Intron 5b 61760 CEU:0.914;0.835 FUNCTIONAL_SNP rs4759061 chr12 53738214 Intergenic 5b 10259 CEU:1.0;0.917 FUNCTIONAL_SNP rs4759086 chr12 53666713 Intron 5b 61242 CEU:0.914;0.835 FUNCTIONAL_SNP rs4758965 chr12 53662735 Intron 5b 65220 CEU:0.914;0.835 FUNCTIONAL_SNP rs2272313 chr12 53671549 Intron 5b 56406 CEU:0.956;0.876, CHB:0.924;0.794 FUNCTIONAL_SNP rs11170506 chr12 53730759 Intergenic 5b 2804 CEU:1.0;0.917 FUNCTIONAL_SNP rs10783573 chr12 53728369 Intron 5b 414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11170495 chr12 53665202 Intron 6 62753 CEU:0.902;0.814 FUNCTIONAL_SNP rs7308162 chr12 53654956 Intergenic 6 72999 CEU:0.949;0.857 FUNCTIONAL_SNP rs7398228 chr12 53660285 Intergenic 6 67670 CEU:0.911;0.829 FUNCTIONAL_SNP rs1609474 chr12 53676814 Intron 7 51141 CEU:0.956;0.876, CHB:0.856;0.733 FUNCTIONAL_SNP rs10747666 chr12 53716836 Intergenic 7 11119 CEU:1.0;0.919, YRI:0.848;0.601 FUNCTIONAL_SNP rs930900 chr12 53727545 Intron 7 410 CEU:1.0;0.958 FUNCTIONAL_SNP rs7399003 chr12 53659536 Intergenic 7 68419 CEU:0.956;0.876, CHB:0.923;0.793 LEAD_SNP rs10876432 chr12 53731891 Intergenic 4 ASSOCIATION 19079262 Bone mineral density (spine) 7.0 SP7 - SP1 LEAD_SNP rs11170631 chr12 54041192 Intergenic 7 ASSOCIATION 20189936 Height 6.04575749056 RPL31P51 - ATP5G2 LEAD_SNP rs941184 chr12 54114158 Intron 6 ASSOCIATION 19165232 Panic disorder 6.52287874528 CALCOCO1 LEAD_SNP rs7969151 chr12 54159277 Intergenic 5b ASSOCIATION 19340012 Tanning 5.69897000434 CALCOCO1 - HOXC13 LEAD_SNP rs2120991 chr12 54270228 Intergenic 6 ASSOCIATION 20460270 Biliary atresia 5.04575749056 CALCOCO1 - HOXC13 FUNCTIONAL_SNP rs7133819 chr12 54262756 Intergenic 4 7472 CEU:0.957;0.915, CHB:1.0;1.0, JPT:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs11170725 chr12 54246522 Intergenic 7 23706 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;1.0 FUNCTIONAL_SNP rs10783610 chr12 54252875 Intergenic 7 17353 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;1.0 LEAD_SNP rs1443512 chr12 54342684 Intergenic 4 ASSOCIATION 20935629 Waist-hip ratio 15.2218487496 HOXC13 - HOXC12 FUNCTIONAL_SNP rs9804784 chr12 54343472 Intergenic 4 788 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2366149 chr12 54347698 Intergenic 5b 5014 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs1822438 chr12 54342326 Intergenic 5b 358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.882 LEAD_SNP rs10506328 chr12 54687232 Intron 6 ASSOCIATION 19820697 Mean platelet volume 6.30102999566 NFE2 FUNCTIONAL_SNP rs7967622 chr12 54677980 Intron 5b 9252 CEU:1.0;0.958 LEAD_SNP rs1153188 chr12 55098996 Intergenic 7 ASSOCIATION 18372903 Type 2 diabetes 6.69897000434 DCD - VDAC1P5 LEAD_SNP rs1701704 chr12 56412487 Intergenic 6 ASSOCIATION 20596022 Alopecia areata 7.52287874528 SUOX - IKZF4 ASSOCIATION 18198356 Type 1 diabetes 9.04575749056 SUOX - IKZF4 FUNCTIONAL_SNP rs773109 chr12 56374695 Coding 5b 37792 CEU:0.953;0.908, CHB:0.941;0.838, JPT:0.938;0.879 FUNCTIONAL_SNP rs2292239 chr12 56482180 Intron 4 69693 CEU:0.952;0.865, CHB:0.933;0.73, JPT:0.938;0.879 FUNCTIONAL_SNP rs705702 chr12 56390636 Intergenic 4 21851 CEU:0.953;0.908, CHB:0.939;0.79, JPT:0.934;0.819 FUNCTIONAL_SNP rs705704 chr12 56435412 Intergenic 4 22925 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs3741499 chr12 56474379 Intron 4 61892 CEU:0.952;0.865, CHB:0.94;0.834, JPT:1.0;0.941 FUNCTIONAL_SNP rs4759229 chr12 56474480 Intron 4 61993 CEU:0.952;0.865, CHB:0.94;0.834, JPT:1.0;0.941 FUNCTIONAL_SNP rs772921 chr12 56403577 Intergenic 5a 8910 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs705698 chr12 56384687 Intron 6 27800 CEU:0.953;0.908, CHB:0.94;0.791, JPT:0.934;0.819 FUNCTIONAL_SNP rs773107 chr12 56369506 Intron 6 42981 CEU:0.951;0.862 FUNCTIONAL_SNP rs773108 chr12 56369911 Intron 6 42576 CEU:0.95;0.903, CHB:0.941;0.838, JPT:0.934;0.819 FUNCTIONAL_SNP rs2456973 chr12 56416928 Intron 7 4441 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.745 FUNCTIONAL_SNP rs877636 chr12 56480583 Intron 7 68096 CEU:0.95;0.858, CHB:0.94;0.834, JPT:1.0;0.941 LEAD_SNP rs12580100 chr12 56439209 Intergenic 3a ASSOCIATION 20953189 Psoriasis 6.0 RPS26 - ERBB3 LEAD_SNP rs11171739 chr12 56470625 Intergenic 6 ASSOCIATION 17554300 Type 1 diabetes 11.0 RPS26 - ERBB3 FUNCTIONAL_SNP rs1131017 chr12 56435929 Exon,non-coding 4 34696 CEU:0.956;0.914, CHB:0.94;0.834, JPT:1.0;0.941, YRI:1.0;0.934 LEAD_SNP rs2292239 chr12 56482180 Intron 4 ASSOCIATION 19430480 Type 1 diabetes 24.6989700043 ERBB3 ASSOCIATION 18978792 Type 1 diabetes 15.5228787453 ERBB3 ASSOCIATION 17554260 Type 1 diabetes 19.6989700043 ERBB3 LEAD_SNP rs2066808 chr12 56737973 Intron 7 ASSOCIATION 20953190 Psoriasis 6.69897000434 STAT2 ASSOCIATION 19169254 Psoriasis 9.0 STAT2 FUNCTIONAL_SNP rs17118409 chr12 56630764 Coding 5b 107209 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs808919 chr12 56647911 Coding 5a 90062 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs11171803 chr12 56718422 Coding 6 19551 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11171806 chr12 56733531 Coding 5a 4442 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2066807 chr12 56740682 Coding 4 2709 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2066818 chr12 56753822 Intron 2b 15849 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864 FUNCTIONAL_SNP rs2695789 chr12 56694261 Intergenic 2b 43712 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2306694 chr12 56680636 Intron 4 57337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs41423244 chr12 56693520 Intron 4 44453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs773652 chr12 56674766 Intron 4 63207 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2371494 chr12 56728000 Intergenic 4 9973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs773665 chr12 56717466 Intron 5a 20507 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs41363748 chr12 56696056 Intergenic 5a 41917 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs2629447 chr12 56700809 Intergenic 5a 37164 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2291361 chr12 56717805 Intron 5a 20168 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2371454 chr12 56647243 Intron 5a 90730 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2306693 chr12 56680531 Intron 5b 57442 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2643626 chr12 56726518 Intron 5b 11455 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17118403 chr12 56630067 Intron 5b 107906 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17118439 chr12 56667604 Intron 5b 70369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2020854 chr12 56743367 Intron 5b 5394 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864, YRI:0.962;0.891 FUNCTIONAL_SNP rs10876882 chr12 56699623 Intergenic 6 38350 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs871130 chr12 56648777 Intron 6 89196 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs744051 chr12 56667298 Intron 6 70675 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2066819 chr12 56750204 Intron 7 12231 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.864 FUNCTIONAL_SNP rs11575229 chr12 56750737 Intron 7 12764 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs17118431 chr12 56667100 Intron 7 70873 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2695782 chr12 56722830 Intron 7 15143 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs41392645 chr12 56696742 Intergenic 7 41231 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1274493 chr12 56682371 Intron 7 55602 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;1.0 LEAD_SNP rs2958154 chr12 57065713 Intron 6 ASSOCIATION 20385819 Age-related macular degeneration 5.69897000434 PTGES3 FUNCTIONAL_SNP rs11171951 chr12 57112637 Coding 7 46924 CEU:1.0;0.893, CHB:1.0;0.933, JPT:1.0;0.805 FUNCTIONAL_SNP rs2958127 chr12 57114307 Coding 4 48594 CEU:1.0;0.899, CHB:1.0;0.933, JPT:1.0;0.738 FUNCTIONAL_SNP rs2255074 chr12 57030026 Exon,non-coding 4 35687 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3214051 chr12 57119236 Exon,non-coding 4 53523 CEU:1.0;0.899, CHB:1.0;0.933, JPT:1.0;0.738 FUNCTIONAL_SNP rs1107479 chr12 57030686 Intergenic 4 35027 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7980317 chr12 57158183 Intron 4 92470 CEU:1.0;0.899, CHB:1.0;0.933, JPT:1.0;0.738 FUNCTIONAL_SNP rs1563896 chr12 57093096 Intergenic 4 27383 CEU:1.0;0.946, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs2926741 chr12 57098597 Intergenic 5a 32884 CEU:1.0;0.899, CHB:1.0;0.929, JPT:1.0;0.77 FUNCTIONAL_SNP rs2958123 chr12 57062225 Intron 5a 3488 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2950390 chr12 57055291 Intergenic 5a 10422 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7295862 chr12 57169158 Intron 5b 103445 CEU:1.0;1.0 FUNCTIONAL_SNP rs2958155 chr12 57064545 Intron 5b 1168 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2290893 chr12 57078620 Intron 5b 12907 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2290894 chr12 57108695 Intron 5b 42982 CEU:1.0;0.899, CHB:1.0;0.933, JPT:1.0;0.738 FUNCTIONAL_SNP rs1026565 chr12 57137828 Intron 6 72115 CEU:1.0;0.899, CHB:0.932;0.868, JPT:1.0;0.738 FUNCTIONAL_SNP rs2035081 chr12 57125879 Intron 6 60166 CEU:1.0;0.899, CHB:0.932;0.868, JPT:1.0;0.732 FUNCTIONAL_SNP rs7973157 chr12 57049193 Intergenic 6 16520 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs898611 chr12 57163316 Intron 6 97603 CEU:1.0;0.899, CHB:1.0;0.933, JPT:1.0;0.738 FUNCTIONAL_SNP rs12229709 chr12 57166499 Intron 6 100786 CEU:1.0;0.855, CHB:0.917;0.841, JPT:1.0;0.738 FUNCTIONAL_SNP rs4759254 chr12 57096674 Intergenic 6 30961 CEU:0.927;0.802, CHB:1.0;0.907, JPT:1.0;0.94 FUNCTIONAL_SNP rs898609 chr12 57106810 Intron 7 41097 CEU:1.0;0.899, CHB:1.0;0.933, JPT:1.0;0.738 FUNCTIONAL_SNP rs2958130 chr12 57140506 Intron 7 74793 CEU:1.0;0.899, CHB:1.0;0.933, JPT:1.0;0.738 FUNCTIONAL_SNP rs2958148 chr12 57103937 Intergenic 7 38224 CEU:1.0;0.888 FUNCTIONAL_SNP rs12229457 chr12 57033680 Intron 7 32033 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11171914 chr12 57043246 Intergenic 7 22467 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7967600 chr12 57161992 Intron 7 96279 CEU:1.0;0.899, CHB:1.0;0.933, JPT:1.0;0.738 FUNCTIONAL_SNP rs10876916 chr12 57086512 Intergenic 7 20799 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs12367822 chr12 57204160 Intergenic 7 ASSOCIATION 20526338 Platelet aggregation 6.0 HSD17B6 - YWHAQP3 FUNCTIONAL_SNP rs4277148 chr12 57180855 Intron 5b 23305 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.828 FUNCTIONAL_SNP rs6581103 chr12 57184425 Intergenic 5b 19735 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs1903370 chr12 57206684 Intergenic 6 2524 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.904 FUNCTIONAL_SNP rs12370142 chr12 57184585 Intergenic 6 19575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs11171986 chr12 57212827 Intergenic 6 8667 CEU:1.0;1.0, CHB:1.0;0.926, JPT:1.0;1.0 FUNCTIONAL_SNP rs10459247 chr12 57171516 Intron 6 32644 CEU:1.0;0.826, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.889 FUNCTIONAL_SNP rs7315786 chr12 57195379 Intergenic 6 8781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11171979 chr12 57195983 Intergenic 6 8177 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs11171978 chr12 57193799 Intergenic 6 10361 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs6581106 chr12 57190543 Intergenic 6 13617 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs1870673 chr12 57199354 Intergenic 7 4806 CEU:1.0;0.882 FUNCTIONAL_SNP rs1813109 chr12 57191863 Intergenic 7 12297 CEU:1.0;1.0 LEAD_SNP rs167769 chr12 57503775 Intron 5b ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 5.69897000434 STAT6 FUNCTIONAL_SNP rs11172106 chr12 57512875 Intergenic 3a 9100 CEU:1.0;0.816, CHB:0.836;0.698, JPT:0.911;0.763 FUNCTIONAL_SNP rs12368672 chr12 57512470 Intergenic 6 8695 CEU:1.0;0.921, CHB:0.941;0.796, JPT:0.911;0.763 FUNCTIONAL_SNP rs324011 chr12 57502182 Intron 7 1593 CEU:1.0;0.919, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.867 LEAD_SNP rs11172113 chr12 57527283 Intron 4 ASSOCIATION 21666692 Migraine 8.39794000867 LRP1 FUNCTIONAL_SNP rs4759276 chr12 57526646 Intron 5b 637 CEU:1.0;0.838, CHB:0.855;0.502, YRI:0.832;0.597 LEAD_SNP rs1106766 chr12 57809456 Intron 7 ASSOCIATION 20884846 Serum urate 10.6989700043 R3HDM2 - INHBC FUNCTIONAL_SNP rs3741414 chr12 57844049 Exon,non-coding 7 34593 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs11609805 chr12 57735045 Exon,non-coding 7 74411 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs7964492 chr12 57823585 Intron 2b 14129 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4760278 chr12 57771153 Intron 4 38303 CEU:1.0;0.952, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs4760254 chr12 57766392 Intron 5b 43064 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4760355 chr12 57725197 Intron 6 84259 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs11172134 chr12 57645789 Intron 6 163667 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.731, YRI:1.0;1.0 FUNCTIONAL_SNP rs11613352 chr12 57792580 Intron 6 16876 CEU:1.0;1.0, YRI:1.0;0.742 FUNCTIONAL_SNP rs11614506 chr12 57815675 Intron 6 6219 CEU:1.0;0.952, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs11172147 chr12 57696677 Intron 7 112779 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs540730 chr12 57807114 Intron 7 2342 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1678542 chr12 57968715 Intron 6 ASSOCIATION 18794853 Rheumatoid arthritis 7.04575749056 KIF5A FUNCTIONAL_SNP rs775322 chr12 57958313 Intron 7 10402 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10876993 chr12 58062667 Intergenic 5b ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 5.39794000867 B4GALNT1 - RPL13AP23 FUNCTIONAL_SNP rs2277322 chr12 58009202 Exon,non-coding 5b 53465 CEU:0.914;0.834, CHB:1.0;0.75, JPT:0.932;0.769 FUNCTIONAL_SNP rs4760168 chr12 58087737 Intergenic 2a 25070 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.939, YRI:0.923;0.792 FUNCTIONAL_SNP rs7314152 chr12 58017701 Intron 4 44966 CEU:0.957;0.916 FUNCTIONAL_SNP rs10083154 chr12 58020933 Intron 4 41734 CEU:0.957;0.916, CHB:1.0;0.786, JPT:0.934;0.82 FUNCTIONAL_SNP rs1628552 chr12 58082142 Intergenic 5a 19475 CEU:0.954;0.91, CHB:1.0;1.0, JPT:1.0;0.939, YRI:0.95;0.595 FUNCTIONAL_SNP rs7979246 chr12 58092554 Intron 5a 29887 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;0.939 FUNCTIONAL_SNP rs1082502 chr12 58035706 Intergenic 5b 26961 CEU:1.0;0.958, CHB:1.0;0.865, JPT:1.0;0.884, YRI:0.871;0.608 FUNCTIONAL_SNP rs1871417 chr12 58018979 Intron 5b 43688 CEU:0.957;0.916, CHB:1.0;0.786, JPT:0.932;0.769 FUNCTIONAL_SNP rs1678514 chr12 58046717 Intergenic 6 15950 CEU:1.0;0.958, CHB:1.0;0.865, JPT:1.0;0.884, YRI:0.871;0.608 FUNCTIONAL_SNP rs1678520 chr12 58049319 Intergenic 6 13348 CEU:1.0;0.958, CHB:1.0;0.782, JPT:1.0;0.821, YRI:0.868;0.601 FUNCTIONAL_SNP rs1678540 chr12 58065002 Intergenic 6 2335 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:0.945;0.608 FUNCTIONAL_SNP rs10877008 chr12 58103592 Intron 6 40925 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.939 FUNCTIONAL_SNP rs10783844 chr12 58098425 Intron 6 35758 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.939 FUNCTIONAL_SNP rs774887 chr12 58034835 Intergenic 6 27832 CEU:1.0;0.958, CHB:1.0;0.858, JPT:1.0;0.884, YRI:0.906;0.549 FUNCTIONAL_SNP rs1689585 chr12 58080140 Intergenic 6 17473 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.884, YRI:1.0;0.615 FUNCTIONAL_SNP rs2640629 chr12 58065448 Intergenic 6 2781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:0.96;0.825 FUNCTIONAL_SNP rs2640631 chr12 58067532 Intergenic 6 4865 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;0.664 FUNCTIONAL_SNP rs1689595 chr12 58056763 Intergenic 6 5904 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;0.963 FUNCTIONAL_SNP rs7976852 chr12 58100551 Intron 7 37884 CEU:0.953;0.908 FUNCTIONAL_SNP rs1678504 chr12 58085498 Intergenic 7 22831 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;0.931, YRI:0.918;0.78 FUNCTIONAL_SNP rs10877001 chr12 58083077 Intergenic 7 20410 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;0.621 FUNCTIONAL_SNP rs3825078 chr12 58089413 Intron 7 26746 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.939 FUNCTIONAL_SNP rs1678516 chr12 58047458 Intergenic 7 15209 CEU:1.0;0.958, CHB:1.0;0.865, JPT:1.0;0.884, YRI:0.871;0.588 FUNCTIONAL_SNP rs10082911 chr12 58104104 Intron 7 41437 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.939 FUNCTIONAL_SNP rs1629032 chr12 58038686 Intergenic 7 23981 CEU:1.0;0.957, YRI:0.912;0.622 FUNCTIONAL_SNP rs774890 chr12 58068388 Intergenic 7 5721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:0.954;0.632 FUNCTIONAL_SNP rs1689587 chr12 58075398 Intergenic 7 12731 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:0.961;0.828 FUNCTIONAL_SNP rs1689592 chr12 58057773 Intergenic 7 4894 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:0.963;0.927 FUNCTIONAL_SNP rs2640637 chr12 58077586 Intergenic 7 14919 CEU:1.0;0.948, YRI:0.957;0.811 LEAD_SNP rs703842 chr12 58162739 Exon,non-coding 6 ASSOCIATION 19525955 Multiple sclerosis 10.3010299957 CYP27B1;METTL1 FUNCTIONAL_SNP rs923829 chr12 58174306 Coding 6 11567 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.58 FUNCTIONAL_SNP rs10747783 chr12 58176614 Coding 4 13875 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10783847 chr12 58196447 Exon,non-coding 6 33708 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.58 FUNCTIONAL_SNP rs10783848 chr12 58196528 Exon,non-coding 6 33789 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2291617 chr12 58166403 Exon,non-coding 4 3664 CEU:1.0;1.0, CHB:1.0;0.758, JPT:1.0;0.698 FUNCTIONAL_SNP rs11172335 chr12 58175201 Exon,non-coding 5b 12462 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1021469 chr12 58208164 Intron 4 45425 CEU:0.958;0.918, CHB:0.884;0.782, JPT:1.0;0.943 FUNCTIONAL_SNP rs10877013 chr12 58165085 Intron 4 2346 CEU:1.0;0.959, CHB:1.0;0.891, JPT:1.0;0.939, YRI:1.0;0.74 FUNCTIONAL_SNP rs2072052 chr12 58146719 Intergenic 4 16020 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs2069502 chr12 58144665 Intron 4 18074 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs10877011 chr12 58124992 Intron 5b 37747 CEU:1.0;0.848, JPT:0.854;0.604 FUNCTIONAL_SNP rs11172343 chr12 58188157 Intron 5b 25418 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11172349 chr12 58212528 Intergenic 5b 49789 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs11172351 chr12 58213485 Intergenic 5b 50746 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs10431552 chr12 58178148 Intron 6 15409 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10877014 chr12 58167661 Intron 6 4922 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.74 FUNCTIONAL_SNP rs10877015 chr12 58167788 Intron 6 5049 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10877019 chr12 58172929 Intron 6 10190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4646536 chr12 58157988 Intron 6 4751 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.706 FUNCTIONAL_SNP rs1875124 chr12 58196802 Intron 6 34063 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs724834 chr12 58180416 Intron 6 17677 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8181644 chr12 58173466 Intron 6 10727 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6581155 chr12 58178162 Intron 6 15423 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.774 FUNCTIONAL_SNP rs3825079 chr12 58203354 Intron 6 40615 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs11172333 chr12 58170335 Intron 6 7596 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11172344 chr12 58193448 Intron 6 30709 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.58 FUNCTIONAL_SNP rs10877012 chr12 58162085 Intergenic 7 654 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10877016 chr12 58167992 Intron 7 5253 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs11172782 chr12 59259628 Intergenic 6 ASSOCIATION 20445134 Heart failure 7.15490195999 RPL21P103 - LRIG3 LEAD_SNP rs10506410 chr12 60797703 Intergenic 6 ASSOCIATION 21348951 Cardiac hypertrophy 5.69897000434 SLC16A7 - PGBD3P1 FUNCTIONAL_SNP rs4448720 chr12 60831139 Intergenic 5a 33436 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs4547136 chr12 60822008 Intergenic 6 24305 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;0.73 FUNCTIONAL_SNP rs7958861 chr12 60810184 Intergenic 6 12481 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.506 FUNCTIONAL_SNP rs4639967 chr12 60840543 Intergenic 6 42840 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs7978104 chr12 60823772 Intergenic 6 26069 CEU:0.939;0.83, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.745 FUNCTIONAL_SNP rs7299843 chr12 60833197 Intergenic 7 35494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.745 FUNCTIONAL_SNP rs12422791 chr12 60810585 Intergenic 7 12882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.87 FUNCTIONAL_SNP rs7300123 chr12 60833283 Intergenic 7 35580 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.745 FUNCTIONAL_SNP rs7958827 chr12 60810104 Intergenic 7 12401 CEU:1.0;1.0, CHB:1.0;0.697, JPT:0.91;0.762, YRI:0.854;0.511 FUNCTIONAL_SNP rs4462385 chr12 60831791 Intergenic 7 34088 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;0.915, YRI:1.0;0.745 FUNCTIONAL_SNP rs1986503 chr12 60815272 Intergenic 7 17569 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs12581330 chr12 60832133 Intergenic 7 34430 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.745 FUNCTIONAL_SNP rs11173474 chr12 60852465 Intergenic 7 54762 CEU:1.0;1.0 FUNCTIONAL_SNP rs10506411 chr12 60800078 Intergenic 7 2375 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;0.934 LEAD_SNP rs7302017 chr12 63004583 Intergenic 6 ASSOCIATION 20966902 Waist circumference 5.30102999566 C12orf61 - PPM1H LEAD_SNP rs10506458 chr12 63445092 Intergenic 7 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.30102999566 RPL14P1 - RSL24D1P5 FUNCTIONAL_SNP rs12580997 chr12 63433420 Intergenic 7 11672 CEU:1.0;1.0, CHB:0.914;0.835, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs12426308 chr12 63405778 Intergenic 7 39314 CEU:1.0;1.0, CHB:1.0;0.834, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs1495013 chr12 63428188 Intergenic 7 16904 CEU:1.0;1.0, CHB:0.914;0.835, JPT:1.0;0.822, YRI:1.0;1.0 LEAD_SNP rs939876 chr12 65252118 Intron 7 ASSOCIATION 20125193 Cognitive test performance 5.69897000434 TBC1D30 LEAD_SNP rs10506525 chr12 65783378 Intron 7 ASSOCIATION 20195514 Primary tooth development (number of teeth) 6.04575749056 MSRB3 ASSOCIATION 20195514 Primary tooth development (time to first tooth eruption) 8.22184874962 MSRB3 FUNCTIONAL_SNP rs1389799 chr12 65824846 Intron 4 41468 CEU:1.0;1.0, CHB:0.947;0.814, JPT:1.0;0.78 FUNCTIONAL_SNP rs10784449 chr12 65788409 Intron 5a 5031 CEU:1.0;0.958, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7973013 chr12 65767528 Intron 5b 15850 CEU:1.0;1.0, YRI:0.957;0.916 FUNCTIONAL_SNP rs12229918 chr12 65762058 Intron 5b 21320 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;0.825 FUNCTIONAL_SNP rs7315374 chr12 65814891 Intron 5b 31513 CEU:1.0;1.0, CHB:1.0;0.867, JPT:1.0;0.909, YRI:1.0;0.686 FUNCTIONAL_SNP rs10784447 chr12 65766498 Intron 5b 16880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs2270547 chr12 65831114 Intron 5b 47736 CEU:1.0;1.0, CHB:0.947;0.814, JPT:1.0;0.825 FUNCTIONAL_SNP rs10735928 chr12 65769626 Intron 6 13752 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.545 FUNCTIONAL_SNP rs7964169 chr12 65781052 Intron 6 2326 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10878268 chr12 65779193 Intron 6 4185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs9668058 chr12 65785867 Intron 6 2489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs1908325 chr12 65784325 Intron 6 947 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs7973042 chr12 65770709 Intron 7 12669 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11175746 chr12 65791358 Intron 7 7980 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs2336715 chr12 65780528 Intron 7 2850 CEU:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs1976273 chr12 65787136 Intron 7 3758 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs1976274 chr12 65787098 Intron 7 3720 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11175762 chr12 65824224 Intron 7 40846 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:0.944;0.649 FUNCTIONAL_SNP rs12810744 chr12 65782040 Intron 7 1338 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2358944 chr12 66117558 Intergenic 6 ASSOCIATION 21150874 Diabetic nephropathy 5.39794000867 MSRB3 - RPSAP52 LEAD_SNP rs10784496 chr12 66160971 Intron 6 ASSOCIATION 20932310 AB1-42 6.52287874528 RPSAP52 LEAD_SNP rs1531343 chr12 66174894 Intron 7 ASSOCIATION 20581827 Type 2 diabetes 8.39794000867 RPSAP52 FUNCTIONAL_SNP rs1154590 chr12 66179161 Intron 5a 4267 CEU:0.898;0.806, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2358949 chr12 66171055 Intron 5a 3839 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.883 FUNCTIONAL_SNP rs2612067 chr12 66170163 Intron 5a 4731 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2884592 chr12 66175743 Intron 5b 849 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs971780 chr12 66182413 Intron 6 7519 CEU:0.898;0.806, CHB:1.0;0.844, JPT:1.0;1.0, YRI:1.0;0.908 FUNCTIONAL_SNP rs2612035 chr12 66192667 Intron 6 17773 CEU:0.898;0.806, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.51 FUNCTIONAL_SNP rs2261070 chr12 66175178 Intron 6 284 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2583922 chr12 66170577 Intron 6 4317 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.724 FUNCTIONAL_SNP rs1122590 chr12 66174856 Intron 7 38 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1993669 chr12 66190153 Intron 7 15259 CEU:0.898;0.806, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.654 LEAD_SNP rs1042725 chr12 66358347 Exon,non-coding 4 ASSOCIATION 18391950 Height 19.5228787453 HMGA2 ASSOCIATION 18391952 Height 17.5228787453 HMGA2 ASSOCIATION 17767157 Height 15.2218487496 HMGA2 FUNCTIONAL_SNP rs7970350 chr12 66360164 Intergenic 7 1817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8756 chr12 66359752 Exon,non-coding 5a ASSOCIATION 20397748 Height 6.39794000867 HMGA2 ASSOCIATION 19343178 Height 13.3010299957 HMGA2 ASSOCIATION 18391951 Height 15.6989700043 HMGA2 FUNCTIONAL_SNP rs1351394 chr12 66351826 Exon,non-coding 5b 7926 CEU:1.0;0.961, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;0.964 FUNCTIONAL_SNP rs1042725 chr12 66358347 Exon,non-coding 4 1405 CEU:1.0;0.854 FUNCTIONAL_SNP rs10784502 chr12 66343810 Intron 5b 15942 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.833, YRI:0.955;0.656 FUNCTIONAL_SNP rs1038196 chr12 66343400 Intron 6 16352 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.833, YRI:0.955;0.656 FUNCTIONAL_SNP rs7970350 chr12 66360164 Intergenic 7 412 CEU:1.0;0.849 FUNCTIONAL_SNP rs7968682 chr12 66371880 Intergenic 7 12128 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;0.897 LEAD_SNP rs12424086 chr12 66364509 Intergenic 6 ASSOCIATION 20195514 Primary tooth development (number of teeth) 5.39794000867 HMGA2 - RPL21P18 ASSOCIATION 20195514 Primary tooth development (time to first tooth eruption) 5.09691001301 HMGA2 - RPL21P18 FUNCTIONAL_SNP rs17179670 chr12 66349812 Exon,non-coding 5b 14697 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1871674 chr12 66348134 Exon,non-coding 7 16375 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7487625 chr12 66319996 Intron 2b 44513 CEU:1.0;0.874 FUNCTIONAL_SNP rs7966340 chr12 66331365 Intron 4 33144 CEU:1.0;0.873 FUNCTIONAL_SNP rs12422370 chr12 66363539 Intergenic 5b 970 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17101923 chr12 66338202 Intron 5b 26307 CEU:1.0;0.93 FUNCTIONAL_SNP rs10878346 chr12 66320873 Intron 5b 43636 CEU:1.0;0.874 LEAD_SNP rs4026608 chr12 66394664 Intergenic 7 ASSOCIATION 19584346 Aortic root size 8.69897000434 HMGA2 - RPL21P18 FUNCTIONAL_SNP rs7979034 chr12 66409715 Intergenic 5b 15051 CEU:1.0;0.889, CHB:1.0;0.945, JPT:1.0;0.948, YRI:1.0;0.732 FUNCTIONAL_SNP rs1871675 chr12 66411692 Intergenic 5b 17028 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs899844 chr12 66398933 Intergenic 6 4269 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs10878359 chr12 66404624 Intergenic 7 9960 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 LEAD_SNP rs1082714 chr12 67628831 Intergenic 6 ASSOCIATION 19668339 Hippocampal atrophy 5.30102999566 GRIP1 - GGTA2P FUNCTIONAL_SNP rs1370716 chr12 67636921 Intergenic 7 8090 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7134599 chr12 68500075 Intergenic 5b ASSOCIATION 21297633 Ulcerative colitis 16.0 RPL39P28 - IFNG FUNCTIONAL_SNP rs12825700 chr12 68492980 Intergenic 4 7095 CEU:1.0;1.0 FUNCTIONAL_SNP rs11177059 chr12 68507468 Intergenic 4 7393 CEU:1.0;1.0 FUNCTIONAL_SNP rs12318183 chr12 68503836 Intergenic 4 3761 CEU:1.0;1.0 FUNCTIONAL_SNP rs12816181 chr12 68504049 Intergenic 5a 3974 CEU:1.0;1.0 FUNCTIONAL_SNP rs12818107 chr12 68483259 Intergenic 5a 16816 CEU:1.0;1.0 FUNCTIONAL_SNP rs1558744 chr12 68504592 Intergenic 5a 4517 CEU:1.0;1.0 FUNCTIONAL_SNP rs7134472 chr12 68499986 Intergenic 5b 89 CEU:1.0;0.958, YRI:1.0;1.0 FUNCTIONAL_SNP rs10878748 chr12 68507093 Intergenic 5b 7018 CEU:1.0;1.0 FUNCTIONAL_SNP rs10878749 chr12 68507139 Intergenic 5b 7064 CEU:1.0;1.0 FUNCTIONAL_SNP rs722749 chr12 68500638 Intergenic 5b 563 CEU:1.0;1.0 FUNCTIONAL_SNP rs723403 chr12 68501454 Intergenic 5b 1379 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1005048 chr12 68500239 Intergenic 5b 164 CEU:1.0;1.0 FUNCTIONAL_SNP rs2193041 chr12 68502110 Intergenic 6 2035 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2870955 chr12 68502325 Intergenic 6 2250 CEU:1.0;1.0 FUNCTIONAL_SNP rs11177060 chr12 68508276 Intergenic 6 8201 CEU:0.955;0.913 FUNCTIONAL_SNP rs11614309 chr12 68503005 Intergenic 6 2930 CEU:1.0;1.0 FUNCTIONAL_SNP rs7138407 chr12 68500862 Intergenic 6 787 CEU:1.0;1.0, YRI:1.0;0.753 FUNCTIONAL_SNP rs12810476 chr12 68481756 Intergenic 6 18319 CEU:1.0;0.956 FUNCTIONAL_SNP rs11610754 chr12 68486587 Intergenic 7 13488 CEU:1.0;1.0 FUNCTIONAL_SNP rs12815372 chr12 68479213 Intergenic 7 20862 CEU:1.0;1.0 FUNCTIONAL_SNP rs11610401 chr12 68487317 Intergenic 7 12758 CEU:1.0;1.0 FUNCTIONAL_SNP rs7301797 chr12 68502890 Intergenic 7 2815 CEU:1.0;1.0 FUNCTIONAL_SNP rs12831020 chr12 68499491 Intergenic 7 584 CEU:1.0;1.0 FUNCTIONAL_SNP rs7304878 chr12 68485984 Intergenic 7 14091 CEU:1.0;1.0 FUNCTIONAL_SNP rs12811446 chr12 68490782 Intergenic 7 9293 CEU:1.0;1.0 FUNCTIONAL_SNP rs722748 chr12 68500524 Intergenic 7 449 CEU:1.0;1.0 FUNCTIONAL_SNP rs11177050 chr12 68497985 Intergenic 7 2090 CEU:1.0;1.0 FUNCTIONAL_SNP rs11177053 chr12 68499237 Intergenic 7 838 CEU:1.0;1.0 FUNCTIONAL_SNP rs11614178 chr12 68508122 Intergenic 7 8047 CEU:0.958;0.88 FUNCTIONAL_SNP rs4255613 chr12 68498670 Intergenic 7 1405 CEU:1.0;1.0 LEAD_SNP rs1558744 chr12 68504592 Intergenic 5a ASSOCIATION 20228799 Ulcerative colitis 11.3979400087 RPL39P28 - IFNG ASSOCIATION 19122664 Ulcerative colitis 11.5228787453 RPL39P28 - IFNG FUNCTIONAL_SNP rs12825700 chr12 68492980 Intergenic 4 11612 CEU:1.0;1.0 FUNCTIONAL_SNP rs11177059 chr12 68507468 Intergenic 4 2876 CEU:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs12318183 chr12 68503836 Intergenic 4 756 CEU:1.0;1.0 FUNCTIONAL_SNP rs12816181 chr12 68504049 Intergenic 5a 543 CEU:1.0;1.0 FUNCTIONAL_SNP rs12818107 chr12 68483259 Intergenic 5a 21333 CEU:1.0;1.0 FUNCTIONAL_SNP rs7134599 chr12 68500075 Intergenic 5b 4517 CEU:1.0;1.0 FUNCTIONAL_SNP rs7134472 chr12 68499986 Intergenic 5b 4606 CEU:1.0;0.958 FUNCTIONAL_SNP rs10878748 chr12 68507093 Intergenic 5b 2501 CEU:1.0;1.0, YRI:1.0;0.793 FUNCTIONAL_SNP rs10878749 chr12 68507139 Intergenic 5b 2547 CEU:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs722749 chr12 68500638 Intergenic 5b 3954 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;1.0, YRI:1.0;0.89 FUNCTIONAL_SNP rs723403 chr12 68501454 Intergenic 5b 3138 CEU:1.0;1.0 FUNCTIONAL_SNP rs1005048 chr12 68500239 Intergenic 5b 4353 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs2193041 chr12 68502110 Intergenic 6 2482 CEU:1.0;1.0 FUNCTIONAL_SNP rs2870955 chr12 68502325 Intergenic 6 2267 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs11177060 chr12 68508276 Intergenic 6 3684 CEU:0.955;0.913 FUNCTIONAL_SNP rs11614309 chr12 68503005 Intergenic 6 1587 CEU:1.0;1.0 FUNCTIONAL_SNP rs7138407 chr12 68500862 Intergenic 6 3730 CEU:1.0;1.0 FUNCTIONAL_SNP rs12810476 chr12 68481756 Intergenic 6 22836 CEU:1.0;0.956 FUNCTIONAL_SNP rs11610754 chr12 68486587 Intergenic 7 18005 CEU:1.0;1.0 FUNCTIONAL_SNP rs12815372 chr12 68479213 Intergenic 7 25379 CEU:1.0;1.0 FUNCTIONAL_SNP rs11610401 chr12 68487317 Intergenic 7 17275 CEU:1.0;1.0 FUNCTIONAL_SNP rs7301797 chr12 68502890 Intergenic 7 1702 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.857 FUNCTIONAL_SNP rs12831020 chr12 68499491 Intergenic 7 5101 CEU:1.0;1.0 FUNCTIONAL_SNP rs7304878 chr12 68485984 Intergenic 7 18608 CEU:1.0;1.0 FUNCTIONAL_SNP rs12811446 chr12 68490782 Intergenic 7 13810 CEU:1.0;1.0 FUNCTIONAL_SNP rs722748 chr12 68500524 Intergenic 7 4068 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs11177050 chr12 68497985 Intergenic 7 6607 CEU:1.0;1.0 FUNCTIONAL_SNP rs11177053 chr12 68499237 Intergenic 7 5355 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs11614178 chr12 68508122 Intergenic 7 3530 CEU:0.958;0.88 FUNCTIONAL_SNP rs4255613 chr12 68498670 Intergenic 7 5922 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.797 LEAD_SNP rs2870946 chr12 68596661 Intron 7 ASSOCIATION 19122664 Ulcerative colitis 6.30102999566 IL26 LEAD_SNP rs12313946 chr12 68961584 Intergenic 7 ASSOCIATION 20139978 Hematological and biochemical traits 7.52287874528 RPSAP12 - RAP1B FUNCTIONAL_SNP rs2956532 chr12 68967492 Intergenic 5b 5908 CEU:1.0;0.919, CHB:1.0;0.91, JPT:0.951;0.905, YRI:1.0;0.864 FUNCTIONAL_SNP rs1550566 chr12 68971561 Intergenic 7 9977 CEU:1.0;0.919, CHB:1.0;0.908, JPT:0.951;0.905, YRI:0.949;0.818 LEAD_SNP rs9943849 chr12 69370756 Intergenic 7 ASSOCIATION 20673876 Major depressive disorder 5.52287874528 RNU7-4P - CPSF6 LEAD_SNP rs10748128 chr12 69827658 Intergenic 5b ASSOCIATION 20881960 Height 19.6989700043 RPS26P45 - FRS2 FUNCTIONAL_SNP rs10878986 chr12 69831694 Intergenic 6 4036 CEU:0.949;0.901, CHB:1.0;0.947, JPT:1.0;1.0 LEAD_SNP rs11177669 chr12 69828681 Intergenic 7 ASSOCIATION 18391951 Height 5.52287874528 RPS26P45 - FRS2 LEAD_SNP rs789560 chr12 70331827 Intron 6 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.15490195999 C12orf28 LEAD_SNP rs1495377 chr12 71577101 Intron 4 ASSOCIATION 17554300 Type 2 diabetes 5.15490195999 TSPAN8 - LGR5 FUNCTIONAL_SNP rs1603232 chr12 71571834 Intron 5a 5267 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1495376 chr12 71577582 Intron 5b 481 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1603231 chr12 71575256 Intron 7 1845 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1798069 chr12 71575733 Intron 7 1368 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4760790 chr12 71634794 Intron 5b ASSOCIATION 20581827 Type 2 diabetes 5.39794000867 TSPAN8 - LGR5 FUNCTIONAL_SNP rs7961581 chr12 71663102 Intron 5a 28308 CEU:1.0;0.945, CHB:1.0;0.77, JPT:0.91;0.66 FUNCTIONAL_SNP rs1353362 chr12 71613276 Intron 5b 21518 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1353361 chr12 71608199 Intron 7 26595 CEU:1.0;0.95, CHB:1.0;0.796, JPT:1.0;0.708 FUNCTIONAL_SNP rs1510940 chr12 71645945 Intron 7 11151 CEU:1.0;0.802, CHB:0.929;0.716, JPT:1.0;0.708, YRI:0.905;0.749 FUNCTIONAL_SNP rs7306184 chr12 71618203 Intron 7 16591 CEU:1.0;1.0, CHB:1.0;0.796, JPT:1.0;0.708, YRI:1.0;0.818 FUNCTIONAL_SNP rs4760915 chr12 71634112 Intron 7 682 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6581998 chr12 71656723 Intron 7 21929 CEU:1.0;1.0, CHB:1.0;0.72, JPT:1.0;0.697 LEAD_SNP rs7961581 chr12 71663102 Intron 5a ASSOCIATION 18372903 Type 2 diabetes 9.0 TSPAN8 - LGR5 LEAD_SNP rs12831974 chr12 72724034 Intron 3a ASSOCIATION 21452313 Rheumatoid arthritis 5.22184874962 TRHDE ASSOCIATION 21452313 Rheumatoid arthritis 5.22184874962 TRHDE LEAD_SNP rs10879517 chr12 73307582 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 5.39794000867 TRHDE - RPL31P48 FUNCTIONAL_SNP rs12305575 chr12 73312224 Intergenic 5b 4642 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs992786 chr12 73311767 Intergenic 6 4185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs961511 chr12 73308563 Intergenic 6 981 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12306579 chr12 73317695 Intergenic 7 10113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs7311145 chr12 73316391 Intergenic 7 8809 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.89 FUNCTIONAL_SNP rs11179453 chr12 73296907 Intergenic 7 10675 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs4544073 chr12 73313705 Intergenic 7 6123 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1516277 chr12 73296140 Intergenic 7 11442 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs7969535 chr12 73298701 Intergenic 7 8881 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.948 LEAD_SNP rs7963521 chr12 73828956 Intergenic 6 ASSOCIATION 20237162 Plasma chemerin levels 5.04575749056 TRHDE - RPL31P48 FUNCTIONAL_SNP rs10785031 chr12 73818580 Intergenic 5a 10376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10785030 chr12 73807964 Intergenic 5a 20992 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs7304704 chr12 73795646 Intergenic 6 33310 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.862 FUNCTIONAL_SNP rs7955005 chr12 73809682 Intergenic 6 19274 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10459281 chr12 73853531 Intergenic 6 24575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.918;0.81 FUNCTIONAL_SNP rs1851042 chr12 73808672 Intergenic 6 20284 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1520552 chr12 73815363 Intergenic 6 13593 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1520567 chr12 73808448 Intergenic 6 20508 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1818723 chr12 73825519 Intergenic 7 3437 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7965850 chr12 73787425 Intergenic 7 41531 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs1829547 chr12 73837424 Intergenic 7 8468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.842 FUNCTIONAL_SNP rs1996684 chr12 73853145 Intergenic 7 24189 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.921;0.817 FUNCTIONAL_SNP rs1915300 chr12 73795345 Intergenic 7 33611 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.856 FUNCTIONAL_SNP rs10459282 chr12 73853622 Intergenic 7 24666 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0, YRI:0.921;0.817 FUNCTIONAL_SNP rs7138633 chr12 73795869 Intergenic 7 33087 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1154865 chr12 73989837 Intergenic 7 ASSOCIATION 17903305 Breast cancer 6.15490195999 TRHDE - RPL31P48 FUNCTIONAL_SNP rs1373221 chr12 73977824 Intergenic 7 12013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.909 FUNCTIONAL_SNP rs10879642 chr12 73981404 Intergenic 7 8433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.838 FUNCTIONAL_SNP rs2363698 chr12 73965043 Intergenic 7 24794 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 LEAD_SNP rs10506701 chr12 74586210 Intergenic 7 ASSOCIATION 17903296 Bone mineral density 6.0 RPL31P48 - VENTXP3 LEAD_SNP rs7307780 chr12 76220618 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 14.3010299957 RPL10P13 - PHLDA1 FUNCTIONAL_SNP rs10879986 chr12 76210363 Intergenic 5b 10255 CEU:1.0;1.0, YRI:0.718;0.515 FUNCTIONAL_SNP rs2367302 chr12 76215754 Intergenic 6 4864 CEU:1.0;0.907, YRI:0.914;0.666 LEAD_SNP rs2669010 chr12 77009060 Intergenic 6 ASSOCIATION 21408207 Systemic lupus erythematosus 5.30102999566 RPL7AP9 - RPL21P98 FUNCTIONAL_SNP rs4432068 chr12 76982825 Intergenic 4 26235 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1402279 chr12 77729385 Intergenic 7 ASSOCIATION 19247474 Smoking behavior 5.30102999566 E2F7 - NAV3 LEAD_SNP rs300489 chr12 78485994 Intron 7 ASSOCIATION 20707712 Self-rated health 5.30102999566 NAV3 LEAD_SNP rs7297018 chr12 80062230 Intron 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.39794000867 PAWR LEAD_SNP rs10506821 chr12 80496923 Intergenic 6 ASSOCIATION 17903296 Hip geometry 6.69897000434 RPL26P32 LEAD_SNP rs2403106 chr12 84008275 Intergenic 7 ASSOCIATION 20662065 Neonatal lupus 5.52287874528 RPL6P25 - SLC6A15 LEAD_SNP rs1545843 chr12 84564068 Intergenic 6 ASSOCIATION 21521612 Major depressive disorder 9.0 RPL6P25 - SLC6A15 FUNCTIONAL_SNP rs1384320 chr12 84568175 Intergenic 5b 4107 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.872 FUNCTIONAL_SNP rs2170539 chr12 84522670 Intergenic 5b 41398 CEU:1.0;0.925, CHB:1.0;0.748, JPT:0.917;0.508 FUNCTIONAL_SNP rs1384321 chr12 84568301 Intergenic 6 4233 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.926 FUNCTIONAL_SNP rs10862831 chr12 84570126 Intergenic 6 6058 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.939, YRI:1.0;0.924 FUNCTIONAL_SNP rs10779075 chr12 84525754 Intergenic 6 38314 CEU:1.0;0.925, CHB:1.0;0.753, JPT:0.917;0.508 FUNCTIONAL_SNP rs7977536 chr12 84539243 Intergenic 6 24825 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.939, YRI:0.877;0.739 FUNCTIONAL_SNP rs1032003 chr12 84528201 Intergenic 6 35867 CEU:1.0;0.925, CHB:1.0;0.764, JPT:0.915;0.545 FUNCTIONAL_SNP rs1482441 chr12 84569019 Intergenic 6 4951 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.928 FUNCTIONAL_SNP rs10779083 chr12 84573381 Intergenic 6 9313 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.941 FUNCTIONAL_SNP rs716114 chr12 84531457 Intergenic 6 32611 CEU:1.0;0.923, CHB:1.0;0.748, JPT:0.917;0.508 FUNCTIONAL_SNP rs10862823 chr12 84525374 Intergenic 6 38694 CEU:1.0;0.922, CHB:1.0;0.753, JPT:0.913;0.538 FUNCTIONAL_SNP rs936659 chr12 84753162 Intergenic 6 189094 CEU:0.953;0.831 FUNCTIONAL_SNP rs10506904 chr12 84517402 Intergenic 7 46666 CEU:1.0;0.889, CHB:0.768;0.51 FUNCTIONAL_SNP rs7959110 chr12 84544702 Intergenic 7 19366 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.939, YRI:1.0;0.657 FUNCTIONAL_SNP rs10746313 chr12 84564694 Intergenic 7 626 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:0.955;0.838 FUNCTIONAL_SNP rs1482430 chr12 84478793 Intergenic 7 85275 CEU:1.0;0.889, CHB:0.768;0.51 FUNCTIONAL_SNP rs1482438 chr12 84578089 Intergenic 7 14021 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.941, YRI:0.951;0.702 FUNCTIONAL_SNP rs936657 chr12 84752889 Intergenic 7 188821 CEU:0.957;0.811 FUNCTIONAL_SNP rs2403183 chr12 84567611 Intergenic 7 3543 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.941 LEAD_SNP rs995030 chr12 88890671 Exon,non-coding 5b ASSOCIATION 19483681 Testicular germ cell tumor 29.5228787453 KITLG ASSOCIATION 19483681 Testicular germ cell tumor 31.0 KITLG FUNCTIONAL_SNP rs4284478 chr12 88907563 Intron 6 16892 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:0.953;0.869 FUNCTIONAL_SNP rs10777123 chr12 88864690 Intergenic 7 25981 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.872 LEAD_SNP rs3782181 chr12 88953561 Intron 5b ASSOCIATION 20543847 Testicular germ cell cancer 25.6989700043 KITLG FUNCTIONAL_SNP rs4842625 chr12 88888247 Exon,non-coding 6 65314 CEU:1.0;0.939, CHB:0.943;0.889, JPT:0.952;0.906 FUNCTIONAL_SNP rs995030 chr12 88890671 Exon,non-coding 5b 62890 CEU:1.0;0.939, CHB:0.943;0.889, JPT:0.952;0.906, YRI:0.941;0.659 FUNCTIONAL_SNP rs1907699 chr12 88889977 Exon,non-coding 7 63584 CEU:1.0;0.938, CHB:0.943;0.889, JPT:0.952;0.906, YRI:1.0;0.947 FUNCTIONAL_SNP rs1352947 chr12 88960727 Intron 4 7166 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs1000788 chr12 88946777 Intron 4 6784 CEU:1.0;0.939, CHB:1.0;0.884, JPT:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs2046971 chr12 88959510 Intron 5a 5949 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs869408 chr12 88974755 Intergenic 5b 21194 CEU:1.0;0.877, CHB:1.0;0.839, YRI:1.0;0.949 FUNCTIONAL_SNP rs10506957 chr12 88967007 Intron 5b 13446 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2407205 chr12 88943596 Intron 5b 9965 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs1355062 chr12 88906789 Intron 5b 46772 CEU:1.0;0.939, CHB:1.0;0.891, JPT:0.95;0.86, YRI:0.944;0.891 FUNCTIONAL_SNP rs1492351 chr12 88944009 Intron 5b 9552 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs3782180 chr12 88953399 Intron 6 162 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.949 FUNCTIONAL_SNP rs7312974 chr12 88948872 Intron 6 4689 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;0.852 FUNCTIONAL_SNP rs4474514 chr12 88953959 Intron 6 398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs11104952 chr12 88956400 Intron 6 2839 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs7486184 chr12 88847001 Intergenic 6 106560 CEU:1.0;0.879, JPT:0.902;0.814 FUNCTIONAL_SNP rs2407206 chr12 88943323 Intron 6 10238 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.773 FUNCTIONAL_SNP rs4284478 chr12 88907563 Intron 6 45998 CEU:1.0;0.939, CHB:1.0;0.945, JPT:0.952;0.906, YRI:0.94;0.629 FUNCTIONAL_SNP rs3782179 chr12 88953326 Intron 7 235 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs1022034 chr12 88918743 Intron 7 34818 CEU:1.0;0.939, CHB:1.0;0.945, JPT:0.952;0.906, YRI:1.0;0.947 FUNCTIONAL_SNP rs10777123 chr12 88864690 Intergenic 7 88871 CEU:1.0;0.939, CHB:0.943;0.889, JPT:0.952;0.906, YRI:0.936;0.563 FUNCTIONAL_SNP rs2639101 chr12 89012852 Intergenic 7 59291 CEU:1.0;0.82, CHB:0.943;0.889, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10858758 chr12 88944518 Intron 7 9043 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.779 FUNCTIONAL_SNP rs1472899 chr12 88951485 Intron 7 2076 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1492355 chr12 89013142 Intergenic 7 59581 CEU:1.0;0.82, CHB:0.942;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3907470 chr12 88958350 Intron 7 4789 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs7313826 chr12 88861682 Intergenic 7 91879 CEU:1.0;0.939, CHB:0.943;0.889, JPT:0.952;0.906, YRI:0.83;0.653 FUNCTIONAL_SNP rs1508595 chr12 88986016 Intergenic 7 32455 CEU:1.0;0.82, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.858 FUNCTIONAL_SNP rs7313352 chr12 88949124 Intron 7 4437 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs1907702 chr12 88955469 Intron 7 1908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4474514 chr12 88953959 Intron 6 ASSOCIATION 19483682 Testicular cancer 14.2218487496 KITLG FUNCTIONAL_SNP rs4842625 chr12 88888247 Exon,non-coding 6 65712 CEU:1.0;0.939, CHB:0.943;0.889, JPT:0.952;0.906 FUNCTIONAL_SNP rs995030 chr12 88890671 Exon,non-coding 5b 63288 CEU:1.0;0.939, CHB:0.943;0.889, JPT:0.952;0.906, YRI:0.944;0.699 FUNCTIONAL_SNP rs1907699 chr12 88889977 Exon,non-coding 7 63982 CEU:1.0;0.938, CHB:0.943;0.889, JPT:0.952;0.906, YRI:1.0;0.899 FUNCTIONAL_SNP rs1352947 chr12 88960727 Intron 4 6768 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1000788 chr12 88946777 Intron 4 7182 CEU:1.0;0.939, CHB:1.0;0.884, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs2046971 chr12 88959510 Intron 5a 5551 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs869408 chr12 88974755 Intergenic 5b 20796 CEU:1.0;0.877, CHB:1.0;0.839, YRI:1.0;1.0 FUNCTIONAL_SNP rs3782181 chr12 88953561 Intron 5b 398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs10506957 chr12 88967007 Intron 5b 13048 CEU:1.0;0.879, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2407205 chr12 88943596 Intron 5b 10363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs1355062 chr12 88906789 Intron 5b 47170 CEU:1.0;0.939, CHB:1.0;0.891, JPT:0.95;0.86, YRI:0.943;0.842 FUNCTIONAL_SNP rs1492351 chr12 88944009 Intron 5b 9950 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs3782180 chr12 88953399 Intron 6 560 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7312974 chr12 88948872 Intron 6 5087 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;0.9 FUNCTIONAL_SNP rs11104952 chr12 88956400 Intron 6 2441 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7486184 chr12 88847001 Intergenic 6 106958 CEU:1.0;0.879, JPT:0.902;0.814 FUNCTIONAL_SNP rs2407206 chr12 88943323 Intron 6 10636 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.816 FUNCTIONAL_SNP rs4284478 chr12 88907563 Intron 6 46396 CEU:1.0;0.939, CHB:1.0;0.945, JPT:0.952;0.906, YRI:0.943;0.667 FUNCTIONAL_SNP rs3782179 chr12 88953326 Intron 7 633 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1022034 chr12 88918743 Intron 7 35216 CEU:1.0;0.939, CHB:1.0;0.945, JPT:0.952;0.906, YRI:1.0;0.899 FUNCTIONAL_SNP rs10777123 chr12 88864690 Intergenic 7 89269 CEU:1.0;0.939, CHB:0.943;0.889, JPT:0.952;0.906, YRI:0.939;0.598 FUNCTIONAL_SNP rs2639101 chr12 89012852 Intergenic 7 58893 CEU:1.0;0.82, CHB:0.943;0.889, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs10858758 chr12 88944518 Intron 7 9441 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs1472899 chr12 88951485 Intron 7 2474 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.948 FUNCTIONAL_SNP rs1492355 chr12 89013142 Intergenic 7 59183 CEU:1.0;0.82, CHB:0.942;0.888, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs3907470 chr12 88958350 Intron 7 4391 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7313826 chr12 88861682 Intergenic 7 92277 CEU:1.0;0.939, CHB:0.943;0.889, JPT:0.952;0.906, YRI:0.827;0.615 FUNCTIONAL_SNP rs1508595 chr12 88986016 Intergenic 7 32057 CEU:1.0;0.82, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.904 FUNCTIONAL_SNP rs7313352 chr12 88949124 Intron 7 4835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.904 FUNCTIONAL_SNP rs1907702 chr12 88955469 Intron 7 1510 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs12821256 chr12 89328335 Intergenic 4 ASSOCIATION 17952075 Blond vs. brown hair color 29.3979400087 KITLG - MRPS6P4 LEAD_SNP rs2681472 chr12 90008959 Intron 7 ASSOCIATION 19430479 Diastolic blood pressure 9.0 ATP2B1 ASSOCIATION 19430479 Hypertension 10.6989700043 ATP2B1 FUNCTIONAL_SNP rs11105354 chr12 90026523 Intron 5a 17564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs11105378 chr12 90090741 Intergenic 6 81782 CEU:1.0;1.0, CHB:0.948;0.898, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs12579302 chr12 90050503 Intergenic 7 41544 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs11105364 chr12 90069276 Intergenic 7 60317 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs2681492 chr12 90013089 Intron 4 ASSOCIATION 19430479 Systolic blood pressure 10.3979400087 ATP2B1 FUNCTIONAL_SNP rs11105368 chr12 90074441 Intergenic 4 61352 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.93 FUNCTIONAL_SNP rs12230074 chr12 90090867 Intergenic 6 77778 CEU:1.0;0.913, CHB:0.945;0.893, JPT:1.0;0.945, YRI:1.0;0.917 FUNCTIONAL_SNP rs17249754 chr12 90060586 Intergenic 6 47497 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.937 FUNCTIONAL_SNP rs6538195 chr12 90062376 Intergenic 7 49287 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs17249754 chr12 90060586 Intergenic 6 ASSOCIATION 21572416 Blood pressure 19.096910013 ATP2B1 - MRPL2P1 ASSOCIATION 21572416 Blood pressure 12.6989700043 ATP2B1 - MRPL2P1 ASSOCIATION 19396169 Biomedical quantitative traits 5.52287874528 ATP2B1 - MRPL2P1 ASSOCIATION 19396169 Biomedical quantitative traits 7.0 ATP2B1 - MRPL2P1 FUNCTIONAL_SNP rs2681492 chr12 90013089 Intron 4 47497 CEU:1.0;0.912, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.937 FUNCTIONAL_SNP rs11105368 chr12 90074441 Intergenic 4 13855 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.929;0.863 FUNCTIONAL_SNP rs12230074 chr12 90090867 Intergenic 6 30281 CEU:1.0;1.0, CHB:0.948;0.898, JPT:1.0;1.0, YRI:0.916;0.839 FUNCTIONAL_SNP rs6538195 chr12 90062376 Intergenic 7 1790 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.94 LEAD_SNP rs10858945 chr12 90443482 Intergenic 7 ASSOCIATION 20395239 Optic disc size (cup) 5.22184874962 MRPL2P1 - C12orf12 FUNCTIONAL_SNP rs7488228 chr12 90470964 Intergenic 5b 27482 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.745 FUNCTIONAL_SNP rs6538224 chr12 90473496 Intergenic 5b 30014 CEU:1.0;0.846, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs4842711 chr12 90447858 Intergenic 6 4376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.74 FUNCTIONAL_SNP rs7958749 chr12 90444011 Intergenic 6 529 CEU:1.0;1.0 FUNCTIONAL_SNP rs11105501 chr12 90482636 Intergenic 6 39154 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7962435 chr12 90474946 Intergenic 6 31464 CEU:1.0;0.854, CHB:1.0;0.898, YRI:1.0;0.538 FUNCTIONAL_SNP rs7303035 chr12 90455180 Intergenic 6 11698 CEU:1.0;0.854, CHB:1.0;0.898 FUNCTIONAL_SNP rs7970711 chr12 90528685 Intergenic 6 85203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4842509 chr12 90562017 Intergenic 7 118535 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7979050 chr12 90530739 Intergenic 7 87257 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10777221 chr12 90441215 Intergenic 7 2267 CEU:1.0;0.818, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs10777222 chr12 90444741 Intergenic 7 1259 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7311631 chr12 90429028 Intergenic 7 14454 CEU:1.0;0.821, CHB:0.944;0.844 FUNCTIONAL_SNP rs7132441 chr12 90478290 Intergenic 7 34808 CEU:1.0;0.873, CHB:1.0;0.898, YRI:1.0;0.555 FUNCTIONAL_SNP rs10858948 chr12 90478651 Intergenic 7 35169 CEU:1.0;0.854 FUNCTIONAL_SNP rs6538218 chr12 90433567 Intergenic 7 9915 CEU:1.0;0.821, CHB:0.944;0.844 FUNCTIONAL_SNP rs7485419 chr12 90474475 Intergenic 7 30993 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6538223 chr12 90466043 Intergenic 7 22561 CEU:1.0;0.854, CHB:1.0;0.898, YRI:1.0;0.545 LEAD_SNP rs1847461 chr12 91077508 Intergenic 7 ASSOCIATION 19247474 Smoking behavior 5.09691001301 MRPL2P1 - C12orf12 LEAD_SNP rs10777317 chr12 91980374 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 5.30102999566 DCN - BTG1 FUNCTIONAL_SNP rs1489895 chr12 92012201 Intergenic 4 31827 CEU:1.0;1.0, CHB:1.0;0.606, YRI:1.0;0.584 FUNCTIONAL_SNP rs2130402 chr12 91976653 Intergenic 5b 3721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6538285 chr12 91992591 Intergenic 6 12217 CEU:1.0;1.0, CHB:0.934;0.641, JPT:1.0;0.532, YRI:0.94;0.749 FUNCTIONAL_SNP rs7299092 chr12 91986482 Intergenic 7 6108 CEU:1.0;1.0, CHB:1.0;0.854, JPT:1.0;0.716, YRI:1.0;0.906 FUNCTIONAL_SNP rs4842780 chr12 91989837 Intergenic 7 9463 CEU:1.0;1.0, YRI:1.0;0.951 LEAD_SNP rs10777332 chr12 92164302 Intergenic 7 ASSOCIATION 19260141 Biochemical measures 5.30102999566 DCN - BTG1 FUNCTIONAL_SNP rs1493762 chr12 92079915 Intergenic 4 84387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.805 FUNCTIONAL_SNP rs10859187 chr12 92120077 Intergenic 5a 44225 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10859192 chr12 92134539 Intergenic 5a 29763 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.846, YRI:1.0;1.0 FUNCTIONAL_SNP rs10859199 chr12 92160199 Intergenic 5a 4103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs1493775 chr12 92132559 Intergenic 6 31743 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10859186 chr12 92119696 Intergenic 6 44606 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11106262 chr12 92118207 Intergenic 6 46095 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1493768 chr12 92119286 Intergenic 7 45016 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1493772 chr12 92129560 Intergenic 7 34742 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1493773 chr12 92129614 Intergenic 7 34688 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1493774 chr12 92131997 Intergenic 7 32305 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs10859177 chr12 92067458 Intergenic 7 96844 CEU:1.0;0.807, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.946;0.808 LEAD_SNP rs17019682 chr12 92305270 Intergenic 7 ASSOCIATION 20445134 Heart failure 5.69897000434 DCN - BTG1 FUNCTIONAL_SNP rs17019675 chr12 92290708 Intergenic 5b 14562 CEU:1.0;1.0 FUNCTIONAL_SNP rs17019671 chr12 92282168 Intergenic 6 23102 CEU:1.0;1.0 FUNCTIONAL_SNP rs4474477 chr12 92312912 Intergenic 6 7642 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11106346 chr12 92328041 Intergenic 7 22771 CEU:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs10219495 chr12 92890520 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 5.30102999566 CLLU1 - C12orf74 FUNCTIONAL_SNP rs7295345 chr12 92906145 Intergenic 7 15625 CEU:1.0;0.89 LEAD_SNP rs1836127 chr12 93550301 Intergenic 5b ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.52287874528 RPL41P5 - NUDT4 FUNCTIONAL_SNP rs6538392 chr12 93557687 Intergenic 2b 7386 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.91 FUNCTIONAL_SNP rs1159556 chr12 93553532 Intergenic 6 3231 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.943;0.726 FUNCTIONAL_SNP rs1433704 chr12 93550429 Intergenic 6 128 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1433705 chr12 93554034 Intergenic 6 3733 CEU:0.918;0.81, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs1836128 chr12 93553696 Intergenic 7 3395 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs1594790 chr12 93551707 Intergenic 7 1406 CEU:1.0;0.961, JPT:1.0;0.716 LEAD_SNP rs3825199 chr12 93976954 Intergenic 7 ASSOCIATION 18391951 Height 6.69897000434 SOCS2 - CRADD LEAD_SNP rs11107116 chr12 93978504 Intergenic 6 ASSOCIATION 18391952 Height 9.22184874962 SOCS2 - CRADD LEAD_SNP rs2660869 chr12 96479267 Intergenic 6 ASSOCIATION 20966902 Height 5.52287874528 LTA4H - ELK3 LEAD_SNP rs11108495 chr12 96807917 Intergenic 6 ASSOCIATION 20966902 Weight 5.39794000867 CDK17 - C12orf55 LEAD_SNP rs10777845 chr12 97689768 Intergenic 6 ASSOCIATION 21658281 Sudden cardiac arrest 5.30102999566 TRNAQ46P - RMST FUNCTIONAL_SNP rs10860172 chr12 97687825 Intergenic 7 1943 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7968606 chr12 99816842 Intron 7 ASSOCIATION 19721433 Response to antipsychotic treatment 6.52287874528 ANKS1B LEAD_SNP rs2373011 chr12 99961349 Intron 7 ASSOCIATION 20966902 Body mass index 5.04575749056 ANKS1B ASSOCIATION 20966902 Waist circumference 5.69897000434 ANKS1B FUNCTIONAL_SNP rs10745860 chr12 99957020 Intron 7 4329 CEU:1.0;1.0, CHB:1.0;0.89, JPT:1.0;1.0, YRI:1.0;0.961 LEAD_SNP rs11110077 chr12 100266113 Intron 7 ASSOCIATION 21107309 Working memory 6.39794000867 ANKS1B LEAD_SNP rs10507130 chr12 101753954 Intron 7 ASSOCIATION 17903303 Coronary artery calcification 5.15490195999 UTP20 FUNCTIONAL_SNP rs11555441 chr12 101787608 Exon,non-coding 6 33654 CEU:1.0;0.847, CHB:0.95;0.903, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs703711 chr12 101674285 Intron 5b 79669 CEU:1.0;0.832, CHB:1.0;0.824, JPT:0.948;0.899, YRI:1.0;1.0 FUNCTIONAL_SNP rs1472556 chr12 101705178 Intron 6 48776 CEU:1.0;0.901, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs703712 chr12 101681073 Intron 7 72881 CEU:1.0;0.847, CHB:1.0;0.86, JPT:0.945;0.893, YRI:1.0;1.0 LEAD_SNP rs7971536 chr12 102373788 Intergenic 7 ASSOCIATION 20881960 Height 13.096910013 RPL9P24 - CCDC53 FUNCTIONAL_SNP rs4764685 chr12 102357893 Intergenic 5a 15895 CEU:0.962;0.891, YRI:0.746;0.52 FUNCTIONAL_SNP rs7978999 chr12 102368065 Intergenic 6 5723 CEU:0.918;0.811 FUNCTIONAL_SNP rs6539023 chr12 102363966 Intergenic 6 9822 CEU:0.925;0.856 FUNCTIONAL_SNP rs4764861 chr12 102372809 Intergenic 6 979 CEU:1.0;0.822 FUNCTIONAL_SNP rs7979370 chr12 102368390 Intergenic 7 5398 CEU:0.923;0.821 FUNCTIONAL_SNP rs12316956 chr12 102376732 Intergenic 7 2944 CEU:0.958;0.815, YRI:1.0;1.0 LEAD_SNP rs2292303 chr12 102513531 Intron 4 ASSOCIATION 19893584 Height 5.09691001301 C12orf48;NUP37 LEAD_SNP rs1520223 chr12 102726338 Intergenic 7 ASSOCIATION 19893584 Height 6.04575749056 PMCH - IGF1 LEAD_SNP rs5742692 chr12 102799598 Intron 6 ASSOCIATION 20189936 Height 7.39794000867 IGF1 LEAD_SNP rs35767 chr12 102875569 Intergenic 4 ASSOCIATION 20081858 Fasting glucose-related traits 7.52287874528 IGF1 ASSOCIATION 20081858 Fasting glucose-related traits 8.69897000434 IGF1 ASSOCIATION 20081858 Fasting insulin-related traits 8.69897000434 IGF1 ASSOCIATION 20081858 Fasting insulin-related traits 7.52287874528 IGF1 FUNCTIONAL_SNP rs855228 chr12 102897764 Intergenic 2b 22195 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;0.895 FUNCTIONAL_SNP rs2162679 chr12 102871259 Intron 4 4310 CEU:1.0;0.899, CHB:1.0;0.806, JPT:1.0;0.898, YRI:1.0;0.93 FUNCTIONAL_SNP rs35745 chr12 102891182 Intergenic 5b 15613 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;0.895 FUNCTIONAL_SNP rs35766 chr12 102880473 Intergenic 7 4904 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;0.895 LEAD_SNP rs2172873 chr12 103125690 Intergenic 5a ASSOCIATION 21460842 Uterine fibroids 5.69897000434 IGF1 - PAH LEAD_SNP rs10745954 chr12 103483094 Intergenic 7 ASSOCIATION 21300955 C-reactive protein 10.6989700043 ASCL1 - C12orf42 FUNCTIONAL_SNP rs3914817 chr12 103494463 Intergenic 3a 11369 CEU:1.0;0.822, CHB:1.0;0.885, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4764939 chr12 103522952 Intergenic 5b 39858 CEU:1.0;0.855, CHB:0.903;0.534, JPT:1.0;0.818 FUNCTIONAL_SNP rs7972145 chr12 103477476 Intergenic 5b 5618 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0 FUNCTIONAL_SNP rs10778215 chr12 103537266 Intergenic 5b 54172 CEU:1.0;0.862, JPT:0.93;0.763 FUNCTIONAL_SNP rs7135240 chr12 103535020 Intergenic 6 51926 CEU:1.0;0.855, JPT:0.927;0.754 FUNCTIONAL_SNP rs1588886 chr12 103447647 Intergenic 6 35447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939 FUNCTIONAL_SNP rs7298698 chr12 103520884 Intergenic 7 37790 CEU:1.0;0.862, CHB:0.905;0.539, JPT:1.0;0.826 FUNCTIONAL_SNP rs4584635 chr12 103475044 Intergenic 7 8050 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;1.0 FUNCTIONAL_SNP rs2222044 chr12 103457949 Intergenic 7 25145 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs10778212 chr12 103455560 Intergenic 7 27534 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.882 FUNCTIONAL_SNP rs7295481 chr12 103492168 Intergenic 7 9074 CEU:1.0;1.0, CHB:1.0;0.602, JPT:1.0;0.818, YRI:1.0;1.0 LEAD_SNP rs10778213 chr12 103495151 Intergenic 6 ASSOCIATION 18439548 C-reactive protein 10.0 ASCL1 - C12orf42 LEAD_SNP rs4964805 chr12 104192824 Intron 5a ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.30102999566 NT5DC3 FUNCTIONAL_SNP rs1866295 chr12 104186946 Coding 5b 5878 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs4964794 chr12 104194418 Intron 4 1594 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4964806 chr12 104192760 Intron 5a 64 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs934847 chr12 104185693 Intron 6 7131 CEU:1.0;0.809, CHB:1.0;0.949, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs4964812 chr12 104189615 Intron 6 3209 CEU:1.0;1.0, CHB:1.0;0.949, JPT:0.952;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs10861105 chr12 104189999 Intron 7 2825 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs11111779 chr12 104185496 Intron 7 7328 CEU:1.0;0.809, CHB:1.0;0.949, JPT:1.0;0.951, YRI:1.0;0.822 LEAD_SNP rs12811699 chr12 105017164 Intron 7 ASSOCIATION 21668797 Cannabis dependence 5.09691001301 CHST11 LEAD_SNP rs4964469 chr12 106949987 Intergenic 6 ASSOCIATION 21084426 Parkinson's disease 6.69897000434 LOC100287944 FUNCTIONAL_SNP rs10861628 chr12 106955617 Intergenic 7 5630 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 LEAD_SNP rs3891355 chr12 106950695 Intergenic 7 ASSOCIATION 17903297 Cognitive test performance 5.52287874528 LOC100287944 LEAD_SNP rs1878022 chr12 108699032 Intron 7 ASSOCIATION 21483023 Response to platinum-based chemotherapy in non-small-cell lung cancer 6.30102999566 CMKLR1 LEAD_SNP rs10861905 chr12 108767333 Intergenic 6 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 6.09691001301 CMKLR1 - FICD FUNCTIONAL_SNP rs10861903 chr12 108767076 Intergenic 4 257 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12227075 chr12 108768103 Intergenic 7 770 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12228753 chr12 108767605 Intergenic 7 272 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10861904 chr12 108767309 Intergenic 7 24 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs11113841 chr12 108765307 Intergenic 7 2026 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.887, YRI:1.0;1.0 FUNCTIONAL_SNP rs11113843 chr12 108766726 Intergenic 7 607 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8179116 chr12 109025427 Intron 5b ASSOCIATION 20585324 Conduct disorder (symptom count) 5.52287874528 SELPLG LEAD_SNP rs9943753 chr12 109840940 Intron 6 ASSOCIATION 20864672 HDL cholesterol 5.52287874528 MYO1H LEAD_SNP rs2338104 chr12 109895168 Exon,non-coding 6 ASSOCIATION 19060906 HDL cholesterol 10.0 KCTD10 ASSOCIATION 18193043 HDL cholesterol 7.52287874528 KCTD10 FUNCTIONAL_SNP rs918106 chr12 109904318 Intron 5a 9150 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.94, YRI:1.0;1.0 FUNCTIONAL_SNP rs2058804 chr12 109909011 Intron 6 13843 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.943, YRI:1.0;1.0 FUNCTIONAL_SNP rs10774708 chr12 109893156 Intron 6 2012 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.943, YRI:1.0;1.0 LEAD_SNP rs2292354 chr12 110368201 Exon,non-coding 5b ASSOCIATION 20694148 Metabolic syndrome 5.15490195999 GIT2 FUNCTIONAL_SNP rs11069139 chr12 110413252 Intron 7 45051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11065611 chr12 110704487 Intergenic 3a ASSOCIATION 18464913 Protein quantitative trait loci 7.0 IFT81 - ATP2A2 LEAD_SNP rs10849915 chr12 111333622 Intron 6 ASSOCIATION 21270382 Alcohol consumption 23.0 CCDC63 LEAD_SNP rs10774610 chr12 111340243 Intron 7 ASSOCIATION 21372407 Drinking behavior 119.045757491 CCDC63 FUNCTIONAL_SNP rs6489822 chr12 111334375 Intron 2b 5868 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.862 FUNCTIONAL_SNP rs11065766 chr12 111349849 Intron 5b 9606 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs6489821 chr12 111334318 Intron 5b 5925 CEU:1.0;1.0, CHB:1.0;0.927, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs10774609 chr12 111325265 Intron 6 14978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs11610779 chr12 111336560 Intron 7 3683 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs1858881 chr12 111334117 Intron 7 6126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 LEAD_SNP rs12229654 chr12 111414461 Intergenic 6 ASSOCIATION 21270382 Alcohol consumption 34.3979400087 MYL2 - CUX2 LEAD_SNP rs3184504 chr12 111884608 Coding 5b ASSOCIATION 21378990 Coronary heart disease 5.22184874962 SH2B3 ASSOCIATION 20453842 Rheumatoid arthritis 5.22184874962 SH2B3 ASSOCIATION 19430480 Type 1 diabetes 26.5228787453 SH2B3 ASSOCIATION 19430479 Diastolic blood pressure 13.5228787453 SH2B3 ASSOCIATION 19430479 Systolic blood pressure 8.30102999566 SH2B3 ASSOCIATION 19198610 Plasma eosinophil count 18.15490196 SH2B3 FUNCTIONAL_SNP rs10774625 chr12 111910219 Intron 6 25611 CEU:1.0;0.96 FUNCTIONAL_SNP rs4766578 chr12 111904371 Intron 6 19763 CEU:1.0;0.96 FUNCTIONAL_SNP rs653178 chr12 112007756 Intron 7 123148 CEU:1.0;1.0 LEAD_SNP rs10774625 chr12 111910219 Intron 6 ASSOCIATION 21060863 Retinal vascular caliber 12.6989700043 ATXN2 FUNCTIONAL_SNP rs3184504 chr12 111884608 Coding 5b 25611 CEU:1.0;0.96 FUNCTIONAL_SNP rs4766578 chr12 111904371 Intron 6 5848 CEU:1.0;1.0 FUNCTIONAL_SNP rs653178 chr12 112007756 Intron 7 97537 CEU:1.0;0.961 LEAD_SNP rs653178 chr12 112007756 Intron 7 ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 18.5228787453 ATXN2 ASSOCIATION 20383146 Chronic kidney disease 10.3979400087 ATXN2 ASSOCIATION 20190752 Celiac disease 20.15490196 ATXN2 ASSOCIATION 19430483 Diastolic blood pressure 17.5228787453 ATXN2 ASSOCIATION 18311140 Celiac disease 7.09691001301 ATXN2 FUNCTIONAL_SNP rs3184504 chr12 111884608 Coding 5b 123148 CEU:1.0;1.0 FUNCTIONAL_SNP rs10774625 chr12 111910219 Intron 6 97537 CEU:1.0;0.961 FUNCTIONAL_SNP rs4766578 chr12 111904371 Intron 6 103385 CEU:1.0;0.96 LEAD_SNP rs11065987 chr12 112072424 Intergenic 4 ASSOCIATION 19862010 Hematocrit 12.0 ATXN2 - BRAP ASSOCIATION 19862010 Hemoglobin 11.0 ATXN2 - BRAP LEAD_SNP rs3782886 chr12 112110489 Coding 7 ASSOCIATION 20139978 Hematological and biochemical traits 8.30102999566 BRAP LEAD_SNP rs11066015 chr12 112168009 Intron 7 ASSOCIATION 21642993 Esophageal cancer 20.15490196 ACAD10 LEAD_SNP rs671 chr12 112241766 Coding 5b ASSOCIATION 21372407 Drinking behavior 210.397940009 ALDH2 ASSOCIATION 20139978 Hematological and biochemical traits 8.30102999566 ALDH2 ASSOCIATION 20139978 Hematological and biochemical traits 9.15490195999 ALDH2 ASSOCIATION 19698717 Esophageal cancer 23.5228787453 ALDH2 LEAD_SNP rs17696736 chr12 112486818 Intron 5b ASSOCIATION 18978792 Type 1 diabetes 17.2218487496 NAA25 ASSOCIATION 17554300 Type 1 diabetes 13.6989700043 NAA25 ASSOCIATION 17554260 Type 1 diabetes 15.6989700043 NAA25 LEAD_SNP rs4767364 chr12 112521448 Intron 7 ASSOCIATION 21437268 Upper aerodigestive tract cancers 7.69897000434 NAA25 FUNCTIONAL_SNP rs1005902 chr12 112667675 Coding 7 146227 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2285810 chr12 112699540 Intron 4 178092 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4767293 chr12 112463296 Intergenic 5b 58152 CEU:1.0;0.813, JPT:1.0;0.741 FUNCTIONAL_SNP rs4767284 chr12 112440731 Intron 6 80717 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs2339973 chr12 112520883 Intron 7 565 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7977534 chr12 112717920 Intron 7 196472 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs10850024 chr12 112718510 Intron 7 197062 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs7314282 chr12 112502438 Intron 7 19010 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2074356 chr12 112645401 Intron 5a ASSOCIATION 21642993 Esophageal cancer 30.6989700043 C12orf51 ASSOCIATION 21270382 Alcohol consumption 58.0457574906 C12orf51 ASSOCIATION 19396169 Biomedical quantitative traits 11.096910013 C12orf51 LEAD_SNP rs11066280 chr12 112817783 Intron 7 ASSOCIATION 21642993 Esophageal cancer 14.6989700043 C12orf51 ASSOCIATION 21572416 Blood pressure 30.096910013 C12orf51 ASSOCIATION 21572416 Blood pressure 35.0 C12orf51 LEAD_SNP rs11066301 chr12 112871372 Intron 6 ASSOCIATION 19820697 Hematological parameters 11.096910013 PTPN11 FUNCTIONAL_SNP rs11066320 chr12 112906415 Intron 6 35043 CEU:1.0;1.0 LEAD_SNP rs3803064 chr12 113173494 Intergenic 6 ASSOCIATION 21507922 Platelet counts 5.15490195999 PTPN11 - RPH3A LEAD_SNP rs2072134 chr12 113409176 Exon,non-coding 4 ASSOCIATION 21270382 Alcohol consumption 16.2218487496 OAS3 LEAD_SNP rs11066587 chr12 113979656 Intergenic 7 ASSOCIATION 19197348 Quantitative traits 5.30102999566 LHX5 - RBM19 LEAD_SNP rs883079 chr12 114793240 Coding 5b ASSOCIATION 21076409 Ventricular conduction 10.0 TBX5 FUNCTIONAL_SNP rs1895582 chr12 114807035 Intron 5b 13795 CEU:1.0;0.809, YRI:0.959;0.919 FUNCTIONAL_SNP rs1895585 chr12 114802138 Intron 6 8898 CEU:1.0;0.809, YRI:1.0;0.959 FUNCTIONAL_SNP rs7135659 chr12 114801772 Intron 6 8532 CEU:1.0;0.802, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.722 FUNCTIONAL_SNP rs1946295 chr12 114802361 Intron 6 9121 CEU:1.0;0.809, YRI:1.0;0.959 FUNCTIONAL_SNP rs7312625 chr12 114799974 Intron 6 6734 CEU:1.0;0.902, YRI:1.0;0.916 FUNCTIONAL_SNP rs4767237 chr12 114800813 Intron 7 7573 CEU:1.0;0.892, YRI:1.0;0.959 FUNCTIONAL_SNP rs1946293 chr12 114802760 Intron 7 9520 CEU:1.0;0.809, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.73 FUNCTIONAL_SNP rs3825215 chr12 114804898 Intron 7 11658 CEU:1.0;0.806, YRI:1.0;0.959 FUNCTIONAL_SNP rs7955405 chr12 114797306 Intron 7 4066 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.826;0.654 FUNCTIONAL_SNP rs10507248 chr12 114797093 Intron 7 3853 CEU:1.0;0.902, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.73 LEAD_SNP rs3825214 chr12 114795443 Intron 5b ASSOCIATION 20062063 Electrocardiographic traits 12.5228787453 TBX5 ASSOCIATION 20062063 Electrocardiographic traits 7.0 TBX5 ASSOCIATION 20062063 Electrocardiographic traits 11.5228787453 TBX5 FUNCTIONAL_SNP rs12367410 chr12 114796688 Intron 5b 1245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1895587 chr12 114769529 Intergenic 6 25914 CEU:1.0;0.813 FUNCTIONAL_SNP rs1895593 chr12 114760815 Intergenic 6 34628 CEU:1.0;0.813 FUNCTIONAL_SNP rs1895597 chr12 114790884 Intergenic 6 4559 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.766 FUNCTIONAL_SNP rs7309910 chr12 114786254 Intergenic 6 9189 CEU:1.0;0.813 FUNCTIONAL_SNP rs10744819 chr12 114761830 Intergenic 6 33613 CEU:1.0;0.811 FUNCTIONAL_SNP rs10744820 chr12 114768127 Intergenic 6 27316 CEU:1.0;0.812 FUNCTIONAL_SNP rs10744823 chr12 114798082 Intron 6 2639 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8181627 chr12 114761764 Intergenic 7 33679 CEU:1.0;0.813 FUNCTIONAL_SNP rs1895596 chr12 114791528 Intergenic 7 3915 CEU:1.0;0.813 FUNCTIONAL_SNP rs8181683 chr12 114761718 Intergenic 7 33725 CEU:1.0;0.813 FUNCTIONAL_SNP rs6489953 chr12 114764762 Intergenic 7 30681 CEU:1.0;0.936, CHB:0.837;0.609, JPT:0.779;0.526 FUNCTIONAL_SNP rs6489955 chr12 114785279 Intergenic 7 10164 CEU:1.0;0.813 FUNCTIONAL_SNP rs7966567 chr12 114761480 Intergenic 7 33963 CEU:1.0;0.813 FUNCTIONAL_SNP rs8181608 chr12 114761583 Intergenic 7 33860 CEU:1.0;0.813 FUNCTIONAL_SNP rs10744818 chr12 114761685 Intergenic 7 33758 CEU:1.0;0.813 LEAD_SNP rs11067228 chr12 115094260 Intergenic 2b ASSOCIATION 21160077 Serum prostate-specific antigen levels 10.6989700043 OSTF1P1 - TBX3 LEAD_SNP rs1896312 chr12 115346424 Intergenic 6 ASSOCIATION 20062060 PR interval 16.5228787453 TBX3 - UBA52P7 FUNCTIONAL_SNP rs4766748 chr12 115354179 Intergenic 2b 7755 CEU:0.957;0.917, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1896329 chr12 115357432 Intergenic 4 11008 CEU:0.958;0.848, CHB:1.0;0.913, JPT:1.0;0.912 FUNCTIONAL_SNP rs1896330 chr12 115357003 Intergenic 4 10579 CEU:1.0;0.958, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2891537 chr12 115358952 Intergenic 4 12528 CEU:1.0;0.958, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs1124477 chr12 115349497 Intergenic 4 3073 CEU:1.0;0.959, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10850409 chr12 115381740 Intergenic 6 35316 CEU:1.0;0.803, CHB:1.0;0.911, JPT:0.948;0.815, YRI:0.935;0.822 FUNCTIONAL_SNP rs1955105 chr12 115344782 Intergenic 7 1642 CEU:1.0;0.959, CHB:0.946;0.743, JPT:0.949;0.857, YRI:1.0;0.942 FUNCTIONAL_SNP rs7132580 chr12 115360824 Intergenic 7 14400 CEU:1.0;0.959, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs7132327 chr12 115381071 Intergenic 7 34647 CEU:1.0;0.805, CHB:1.0;0.913, JPT:0.949;0.819, YRI:0.941;0.886 FUNCTIONAL_SNP rs2384552 chr12 115357928 Intergenic 7 11504 CEU:0.956;0.842, CHB:1.0;0.909, JPT:1.0;0.909 FUNCTIONAL_SNP rs7301677 chr12 115381147 Intergenic 7 34723 CEU:1.0;0.806, CHB:1.0;0.907, JPT:1.0;0.844, YRI:0.939;0.881 FUNCTIONAL_SNP rs3914956 chr12 115363751 Intergenic 7 17327 CEU:1.0;0.803, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.879 FUNCTIONAL_SNP rs7966951 chr12 115365211 Intergenic 7 18787 CEU:1.0;0.805, CHB:1.0;0.956, JPT:1.0;1.0, YRI:1.0;0.886 LEAD_SNP rs2384550 chr12 115352731 Intergenic 7 ASSOCIATION 19430479 Diastolic blood pressure 7.39794000867 TBX3 - UBA52P7 LEAD_SNP rs10850409 chr12 115381740 Intergenic 6 ASSOCIATION 21076409 Ventricular conduction 9.52287874528 TBX3 - UBA52P7 FUNCTIONAL_SNP rs4766748 chr12 115354179 Intergenic 2b 27561 CEU:1.0;0.803, CHB:0.951;0.864, JPT:0.948;0.815, YRI:0.938;0.829 FUNCTIONAL_SNP rs10744836 chr12 115371742 Intergenic 4 9998 CEU:1.0;0.914, CHB:1.0;0.955, JPT:0.851;0.724, YRI:1.0;0.639 FUNCTIONAL_SNP rs1896330 chr12 115357003 Intergenic 4 24737 CEU:1.0;0.829, CHB:1.0;0.949, JPT:0.941;0.795, YRI:0.938;0.827 FUNCTIONAL_SNP rs2891537 chr12 115358952 Intergenic 4 22788 CEU:1.0;0.838, CHB:1.0;0.955, JPT:0.948;0.815, YRI:0.939;0.881 FUNCTIONAL_SNP rs7966651 chr12 115371958 Intergenic 4 9782 CEU:1.0;0.956, CHB:1.0;0.955, JPT:0.851;0.724, YRI:0.933;0.595 FUNCTIONAL_SNP rs7311039 chr12 115371208 Intergenic 4 10532 CEU:1.0;0.956, CHB:1.0;0.955, JPT:0.851;0.724 FUNCTIONAL_SNP rs7980361 chr12 115363111 Intergenic 5b 18629 CEU:1.0;0.956, CHB:1.0;0.955, JPT:0.851;0.724, YRI:0.933;0.595 FUNCTIONAL_SNP rs6416327 chr12 115361364 Intergenic 5b 20376 CEU:1.0;0.836, YRI:0.902;0.742 FUNCTIONAL_SNP rs7979724 chr12 115362584 Intergenic 5b 19156 CEU:1.0;0.914, CHB:0.953;0.908, JPT:0.851;0.724, YRI:0.933;0.595 FUNCTIONAL_SNP rs11067327 chr12 115363443 Intergenic 5b 18297 CEU:1.0;0.914, CHB:1.0;0.953, JPT:0.846;0.715 FUNCTIONAL_SNP rs1896312 chr12 115346424 Intergenic 6 35316 CEU:1.0;0.803, CHB:1.0;0.911, JPT:0.948;0.815, YRI:0.935;0.822 FUNCTIONAL_SNP rs7132580 chr12 115360824 Intergenic 7 20916 CEU:1.0;0.83, CHB:1.0;0.951, JPT:0.946;0.809, YRI:1.0;0.937 FUNCTIONAL_SNP rs7132327 chr12 115381071 Intergenic 7 669 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2384554 chr12 115362278 Intergenic 7 19462 CEU:1.0;0.914, CHB:0.953;0.908, JPT:0.851;0.724, YRI:0.933;0.595 FUNCTIONAL_SNP rs7301677 chr12 115381147 Intergenic 7 593 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7132593 chr12 115360866 Intergenic 7 20874 CEU:1.0;0.956, CHB:1.0;0.955, JPT:0.851;0.724 FUNCTIONAL_SNP rs3914956 chr12 115363751 Intergenic 7 17989 CEU:1.0;1.0, CHB:1.0;0.955, JPT:0.948;0.815, YRI:1.0;0.939 FUNCTIONAL_SNP rs7966951 chr12 115365211 Intergenic 7 16529 CEU:1.0;1.0, CHB:1.0;0.955, JPT:0.944;0.804, YRI:1.0;0.937 FUNCTIONAL_SNP rs7977151 chr12 115362972 Intergenic 7 18768 CEU:1.0;0.914, CHB:0.953;0.908, JPT:0.851;0.724, YRI:0.933;0.595 LEAD_SNP rs2194980 chr12 115502718 Intergenic 7 ASSOCIATION 19043545 Serum metabolites 6.52287874528 TBX3 - UBA52P7 LEAD_SNP rs35444 chr12 115552437 Intergenic 7 ASSOCIATION 21572416 Blood pressure 6.09691001301 TBX3 - UBA52P7 ASSOCIATION 21572416 Blood pressure 10.0 TBX3 - UBA52P7 LEAD_SNP rs2089222 chr12 117002658 Intron 5b ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 7.09691001301 MAP1LC3B2 FUNCTIONAL_SNP rs11609872 chr12 116975386 Intergenic 4 27272 CEU:1.0;1.0, CHB:1.0;0.932, JPT:1.0;1.0 LEAD_SNP rs4767631 chr12 118311743 Intron 7 ASSOCIATION 19260141 Biochemical measures 6.22184874962 KSR2 FUNCTIONAL_SNP rs10850930 chr12 118337919 Intron 7 26176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 LEAD_SNP rs10444502 chr12 118353871 Intron 7 ASSOCIATION 19260141 Biochemical measures 5.22184874962 KSR2 LEAD_SNP rs1997111 chr12 119387918 Intergenic 7 ASSOCIATION 20932310 T-tau 8.0 RPL17P37 - SRRM4 FUNCTIONAL_SNP rs11069195 chr12 119388341 Intergenic 7 423 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11064768 chr12 119818509 Intron 7 ASSOCIATION 18332876 Schizophrenia 6.0 CCDC60 LEAD_SNP rs7137869 chr12 119989646 Intron 7 ASSOCIATION 17903295 Aging traits 6.22184874962 CCDC60 - TMEM233 LEAD_SNP rs11064994 chr12 120455764 Intron 7 ASSOCIATION 19734545 Cognitive performance 5.22184874962 CCDC64 LEAD_SNP rs2014355 chr12 121175524 Intron 5b ASSOCIATION 20037589 Serum metabolites 95.3010299957 ACADS FUNCTIONAL_SNP rs3916 chr12 121177272 Exon,non-coding 5b 1748 CEU:1.0;1.0, CHB:1.0;0.798, JPT:1.0;0.896, YRI:1.0;1.0 FUNCTIONAL_SNP rs2066938 chr12 121160615 Exon,non-coding 7 14909 CEU:1.0;1.0, JPT:1.0;0.51 FUNCTIONAL_SNP rs3999408 chr12 121167387 Intron 5a 8137 CEU:1.0;1.0, JPT:1.0;0.51 FUNCTIONAL_SNP rs7306541 chr12 121130046 Intron 5b 45478 CEU:1.0;1.0, JPT:1.0;0.51 FUNCTIONAL_SNP rs10431386 chr12 121128926 Intron 6 46598 CEU:1.0;0.815 LEAD_SNP rs1039302 chr12 121236258 Intron 4 ASSOCIATION 19197348 Quantitative traits 5.30102999566 SPPL3 FUNCTIONAL_SNP rs11065259 chr12 121205604 Intron 2b 30654 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7135147 chr12 121259984 Intron 4 23726 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10774568 chr12 121239696 Intron 5a 3438 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs10849786 chr12 121209302 Intron 6 26956 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs6489782 chr12 121247491 Intron 7 11233 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.849, YRI:1.0;0.963 LEAD_SNP rs6489785 chr12 121363724 Intergenic 4 ASSOCIATION 20834067 Longevity 6.0 RPL12P33 - NCRNA00262 LEAD_SNP rs2650000 chr12 121388962 Intergenic 5b ASSOCIATION 19060906 LDL cholesterol 7.69897000434 RPL12P33 - NCRNA00262 ASSOCIATION 19060910 Other metabolic traits 10.5228787453 RPL12P33 - NCRNA00262 FUNCTIONAL_SNP rs2251468 chr12 121405126 Intergenic 5b 16164 CEU:1.0;1.0, CHB:1.0;0.83, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs7305618 chr12 121402932 Intergenic 5a ASSOCIATION 21647738 C-reactive protein 8.0 RPL12P33 - NCRNA00262 ASSOCIATION 21573907 Type 2 diabetes 7.69897000434 RPL12P33 - NCRNA00262 LEAD_SNP rs7953249 chr12 121403724 Intergenic 4 ASSOCIATION 21203500 N-glycan levels 7.69897000434 RPL12P33 - NCRNA00262 FUNCTIONAL_SNP rs7310409 chr12 121424861 Intron 5b 21137 CEU:0.958;0.882, CHB:0.885;0.621, JPT:0.789;0.623 FUNCTIONAL_SNP rs7979473 chr12 121420260 Intron 5b 16536 CEU:0.958;0.882, CHB:0.885;0.621, JPT:0.789;0.623 FUNCTIONAL_SNP rs7979478 chr12 121420263 Intron 5b 16539 CEU:0.958;0.882, CHB:0.885;0.621, JPT:0.789;0.623 FUNCTIONAL_SNP rs2393775 chr12 121424574 Intron 6 20850 CEU:0.955;0.872, CHB:0.885;0.621 FUNCTIONAL_SNP rs2393791 chr12 121423956 Intron 6 20232 CEU:0.958;0.882, CHB:0.885;0.621, JPT:0.789;0.623 FUNCTIONAL_SNP rs10774579 chr12 121405210 Intergenic 7 1486 CEU:1.0;0.82, CHB:1.0;0.792, JPT:1.0;0.952 LEAD_SNP rs1183910 chr12 121420807 Intron 7 ASSOCIATION 21300955 C-reactive protein 123.698970004 HNF1A ASSOCIATION 19567438 C-reactive protein 30.0 HNF1A FUNCTIONAL_SNP rs1169288 chr12 121416650 Coding 4 4157 CEU:1.0;0.957, CHB:0.901;0.743, JPT:0.899;0.77 FUNCTIONAL_SNP rs1169286 chr12 121419056 Intron 2b 1751 CEU:1.0;0.8, CHB:1.0;0.688, JPT:1.0;0.86 FUNCTIONAL_SNP rs2244608 chr12 121416988 Intron 5b 3819 CEU:1.0;0.957, CHB:0.952;0.866, JPT:1.0;0.954, YRI:0.899;0.734 FUNCTIONAL_SNP rs2650000 chr12 121388962 Intergenic 5b 31845 CEU:0.953;0.867, CHB:0.943;0.704, JPT:0.789;0.623 FUNCTIONAL_SNP rs2251468 chr12 121405126 Intergenic 5b 15681 CEU:0.953;0.867, CHB:0.951;0.862, JPT:0.839;0.671 FUNCTIONAL_SNP rs11065385 chr12 121423386 Intron 7 2579 CEU:1.0;1.0, CHB:0.951;0.905, JPT:1.0;1.0, YRI:1.0;0.881 LEAD_SNP rs7310409 chr12 121424861 Intron 5b ASSOCIATION 21196492 C-reactive protein 7.52287874528 HNF1A ASSOCIATION 18439548 C-reactive protein 16.15490196 HNF1A FUNCTIONAL_SNP rs2393775 chr12 121424574 Intron 6 287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.891, YRI:1.0;1.0 FUNCTIONAL_SNP rs2393791 chr12 121423956 Intron 6 905 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2259816 chr12 121435587 Coding 5b ASSOCIATION 19198612 Coronary heart disease 6.30102999566 HNF1A FUNCTIONAL_SNP rs2464195 chr12 121435475 Coding 5b 112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169310 chr12 121439433 Exon,non-coding 2b 3846 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169312 chr12 121441461 Exon,non-coding 7 5874 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169313 chr12 121442670 Intron 4 7083 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs735396 chr12 121438844 Intron 4 3257 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169306 chr12 121438311 Intron 5b 2724 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs735396 chr12 121438844 Intron 4 ASSOCIATION 21203500 N-glycan levels 7.39794000867 HNF1A FUNCTIONAL_SNP rs2464195 chr12 121435475 Coding 5b 3369 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2259816 chr12 121435587 Coding 5b 3257 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169310 chr12 121439433 Exon,non-coding 2b 589 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169312 chr12 121441461 Exon,non-coding 7 2617 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169313 chr12 121442670 Intron 4 3826 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169306 chr12 121438311 Intron 5b 533 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1169310 chr12 121439433 Exon,non-coding 2b ASSOCIATION 18439552 C-reactive protein 7.69897000434 HNF1A FUNCTIONAL_SNP rs2464195 chr12 121435475 Coding 5b 3958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2259816 chr12 121435587 Coding 5b 3846 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169312 chr12 121441461 Exon,non-coding 7 2028 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169313 chr12 121442670 Intron 4 3237 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs735396 chr12 121438844 Intron 4 589 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169306 chr12 121438311 Intron 5b 1122 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1169313 chr12 121442670 Intron 4 ASSOCIATION 18940312 Plasma levels of liver enzymes 9.69897000434 C12orf43 FUNCTIONAL_SNP rs2464195 chr12 121435475 Coding 5b 7195 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2259816 chr12 121435587 Coding 5b 7083 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169310 chr12 121439433 Exon,non-coding 2b 3237 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169312 chr12 121441461 Exon,non-coding 7 1209 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs735396 chr12 121438844 Intron 4 3826 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1169306 chr12 121438311 Intron 5b 4359 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7957197 chr12 121460686 Intron 7 ASSOCIATION 20581827 Type 2 diabetes 7.69897000434 OASL FUNCTIONAL_SNP rs12427353 chr12 121426901 Intron 5b 33785 CEU:1.0;0.815 LEAD_SNP rs7961894 chr12 122365583 Intron 4 ASSOCIATION 19820697 Mean platelet volume 43.5228787453 WDR66 ASSOCIATION 19110211 Mean platelet volume 47.15490196 WDR66 LEAD_SNP rs830124 chr12 122395777 Intron 6 ASSOCIATION 21572414 Urinary metabolites 46.0 WDR66 FUNCTIONAL_SNP rs2230681 chr12 122326812 Coding 4 68965 CEU:1.0;1.0, CHB:1.0;0.554 FUNCTIONAL_SNP rs1154510 chr12 122295335 Coding 2b 100442 CEU:1.0;1.0, CHB:1.0;0.553 FUNCTIONAL_SNP rs1720041 chr12 122457579 Exon,non-coding 7 61802 CEU:0.905;0.82, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs1169093 chr12 122464920 Intron 2b 69143 CEU:0.905;0.82, CHB:0.856;0.733, JPT:1.0;0.655 FUNCTIONAL_SNP rs1182927 chr12 122439369 Intron 2b 43592 CEU:0.905;0.82, CHB:0.924;0.794, JPT:1.0;0.62 FUNCTIONAL_SNP rs6486794 chr12 122469878 Intron 4 74101 CEU:0.905;0.82, JPT:1.0;0.657 FUNCTIONAL_SNP rs7957207 chr12 122469395 Intron 4 73618 CEU:1.0;0.907, JPT:1.0;0.657 FUNCTIONAL_SNP rs493519 chr12 122397476 Intron 4 1699 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;0.657, YRI:1.0;0.577 FUNCTIONAL_SNP rs1185260 chr12 122389248 Intron 5a 6529 CEU:1.0;1.0, CHB:1.0;0.863, JPT:0.899;0.583 FUNCTIONAL_SNP rs1678969 chr12 122371474 Intron 5a 24303 CEU:1.0;0.838, CHB:0.923;0.793, JPT:0.811;0.518 FUNCTIONAL_SNP rs2596144 chr12 122297738 Intron 5b 98039 CEU:1.0;1.0 FUNCTIONAL_SNP rs830122 chr12 122426236 Intron 5b 30459 CEU:0.905;0.82, CHB:0.924;0.794, JPT:1.0;0.72 FUNCTIONAL_SNP rs1169077 chr12 122425012 Intron 5b 29235 CEU:0.905;0.82, CHB:0.924;0.794, JPT:1.0;0.657 FUNCTIONAL_SNP rs895958 chr12 122378206 Intron 5b 17571 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;0.657 FUNCTIONAL_SNP rs7314056 chr12 122342964 Intron 6 52813 CEU:1.0;1.0, CHB:1.0;0.554 FUNCTIONAL_SNP rs4760099 chr12 122318723 Intron 6 77054 CEU:1.0;1.0, CHB:1.0;0.554 FUNCTIONAL_SNP rs2620340 chr12 122291261 Intron 6 104516 CEU:1.0;1.0, CHB:1.0;0.613, JPT:1.0;0.673 FUNCTIONAL_SNP rs2247291 chr12 122284715 Intron 6 111062 CEU:1.0;1.0 FUNCTIONAL_SNP rs895959 chr12 122320352 Intron 6 75425 CEU:1.0;1.0, CHB:1.0;0.554 FUNCTIONAL_SNP rs2707056 chr12 122287290 Intron 6 108487 CEU:1.0;1.0, CHB:1.0;0.554 FUNCTIONAL_SNP rs1667583 chr12 122370206 Intron 6 25571 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;0.657 FUNCTIONAL_SNP rs7961103 chr12 122470324 Intron 7 74547 CEU:1.0;0.907, JPT:1.0;0.657 FUNCTIONAL_SNP rs1169085 chr12 122445233 Intergenic 7 49456 CEU:0.905;0.82, CHB:0.924;0.794, JPT:1.0;0.657 FUNCTIONAL_SNP rs9668191 chr12 122305295 Intron 7 90482 CEU:1.0;0.912 FUNCTIONAL_SNP rs853758 chr12 122408855 Intron 7 13078 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;0.654 LEAD_SNP rs12817488 chr12 123296294 Intron 7 ASSOCIATION 21292315 Parkinson's disease 12.5228787453 CCDC62 LEAD_SNP rs7296418 chr12 123457619 Intron 7 ASSOCIATION 21507922 Platelet counts 5.69897000434 ABCB9;OGFOD2 FUNCTIONAL_SNP rs1727307 chr12 123575742 Intron 7 118123 CEU:1.0;0.912, CHB:1.0;0.954, JPT:1.0;0.857, YRI:1.0;0.914 LEAD_SNP rs1727307 chr12 123575742 Intron 7 ASSOCIATION 21507922 Platelet counts 5.52287874528 PITPNM2 FUNCTIONAL_SNP rs7296418 chr12 123457619 Intron 7 118123 CEU:1.0;0.912, CHB:1.0;0.954, JPT:1.0;0.857, YRI:1.0;0.914 LEAD_SNP rs1790100 chr12 123656725 Intron 5b ASSOCIATION 19525953 Multiple sclerosis 6.15490195999 MPHOSPH9 LEAD_SNP rs11830103 chr12 123823546 Intron 6 ASSOCIATION 20881960 Height 14.3979400087 SBNO1 FUNCTIONAL_SNP rs1060105 chr12 123806219 Coding 7 17327 CEU:1.0;0.92 FUNCTIONAL_SNP rs1051431 chr12 123645803 Coding 5b 177743 CEU:0.918;0.843 FUNCTIONAL_SNP rs12322888 chr12 123825559 Coding 7 2013 CEU:1.0;0.92 FUNCTIONAL_SNP rs1727315 chr12 123638930 Exon,non-coding 6 184616 CEU:0.918;0.843 FUNCTIONAL_SNP rs1727313 chr12 123640853 Exon,non-coding 6 182693 CEU:0.918;0.843 FUNCTIONAL_SNP rs884548 chr12 123634122 Intergenic 4 189424 CEU:0.92;0.846 FUNCTIONAL_SNP rs1716165 chr12 123648881 Intron 4 174665 CEU:0.918;0.843 FUNCTIONAL_SNP rs1716168 chr12 123651966 Intron 4 171580 CEU:0.918;0.843 FUNCTIONAL_SNP rs7980687 chr12 123822711 Intron 5a 835 CEU:1.0;0.921 FUNCTIONAL_SNP rs1790100 chr12 123656725 Intron 5b 166821 CEU:0.919;0.845 FUNCTIONAL_SNP rs1790108 chr12 123636841 Intergenic 5b 186705 CEU:0.918;0.843 FUNCTIONAL_SNP rs1569068 chr12 123632276 Intergenic 5b 191270 CEU:0.918;0.843 FUNCTIONAL_SNP rs1106240 chr12 123626982 Intergenic 5b 196564 CEU:0.918;0.843 FUNCTIONAL_SNP rs1106241 chr12 123627016 Intergenic 5b 196530 CEU:0.918;0.843 FUNCTIONAL_SNP rs1727309 chr12 123658258 Intron 5b 165288 CEU:0.917;0.841 FUNCTIONAL_SNP rs1727320 chr12 123700476 Intron 5b 123070 CEU:0.919;0.844 FUNCTIONAL_SNP rs1727296 chr12 123647725 Intron 5b 175821 CEU:0.919;0.844 FUNCTIONAL_SNP rs28406193 chr12 123891865 Intron 5b 68319 CEU:1.0;0.92 FUNCTIONAL_SNP rs28472704 chr12 123887369 Intron 6 63823 CEU:1.0;0.92 FUNCTIONAL_SNP rs28706696 chr12 123908126 Intron 6 84580 CEU:1.0;0.842 FUNCTIONAL_SNP rs1727306 chr12 123665695 Intron 6 157851 CEU:0.919;0.844 FUNCTIONAL_SNP rs1790098 chr12 123655481 Intron 6 168065 CEU:0.918;0.843 FUNCTIONAL_SNP rs2695478 chr12 123689521 Intron 6 134025 CEU:0.918;0.843 FUNCTIONAL_SNP rs1716167 chr12 123651162 Intron 6 172384 CEU:0.918;0.843 FUNCTIONAL_SNP rs1716171 chr12 123716376 Intron 6 107170 CEU:0.918;0.843 FUNCTIONAL_SNP rs1716176 chr12 123655467 Intron 6 168079 CEU:0.919;0.845 FUNCTIONAL_SNP rs1716177 chr12 123655457 Intron 6 168089 CEU:0.92;0.846 FUNCTIONAL_SNP rs1879380 chr12 123739111 Intron 6 84435 CEU:0.918;0.843 FUNCTIONAL_SNP rs1727323 chr12 123698790 Intron 6 124756 CEU:0.918;0.843 FUNCTIONAL_SNP rs1727324 chr12 123698603 Intron 6 124943 CEU:0.92;0.846 FUNCTIONAL_SNP rs12304248 chr12 123810425 Intron 6 13121 CEU:0.92;0.846 FUNCTIONAL_SNP rs941305 chr12 123715266 Intron 6 108280 CEU:0.92;0.846 FUNCTIONAL_SNP rs941306 chr12 123715113 Intron 6 108433 CEU:0.92;0.846 FUNCTIONAL_SNP rs28625019 chr12 123907563 Intron 6 84017 CEU:1.0;0.842 FUNCTIONAL_SNP rs1716160 chr12 123700225 Intron 7 123321 CEU:0.918;0.843 FUNCTIONAL_SNP rs1790123 chr12 123659542 Intron 7 164004 CEU:0.918;0.843 FUNCTIONAL_SNP rs12298826 chr12 123829028 Intron 7 5482 CEU:1.0;0.92 FUNCTIONAL_SNP rs1790095 chr12 123681222 Intron 7 142324 CEU:0.918;0.843 FUNCTIONAL_SNP rs10846486 chr12 123709927 Intron 7 113619 CEU:0.92;0.846 FUNCTIONAL_SNP rs1716164 chr12 123663660 Intron 7 159886 CEU:0.918;0.843 FUNCTIONAL_SNP rs12316131 chr12 123817796 Intron 7 5750 CEU:1.0;0.92 FUNCTIONAL_SNP rs1402274 chr12 123686224 Intron 7 137322 CEU:0.918;0.843 FUNCTIONAL_SNP rs1790131 chr12 123701010 Intron 7 122536 CEU:0.918;0.843 FUNCTIONAL_SNP rs7953929 chr12 123758235 Intergenic 7 65311 CEU:0.918;0.843 FUNCTIONAL_SNP rs1716157 chr12 123670473 Intron 7 153073 CEU:0.918;0.843 FUNCTIONAL_SNP rs2682434 chr12 123694724 Intron 7 128822 CEU:0.918;0.843 FUNCTIONAL_SNP rs4372492 chr12 123697357 Intron 7 126189 CEU:0.92;0.846 FUNCTIONAL_SNP rs1716170 chr12 123716513 Intron 7 107033 CEU:0.918;0.843 FUNCTIONAL_SNP rs1716175 chr12 123658388 Intron 7 165158 CEU:0.92;0.846 FUNCTIONAL_SNP rs2049114 chr12 123657338 Intron 7 166208 CEU:0.919;0.844 FUNCTIONAL_SNP rs1727325 chr12 123698332 Intron 7 125214 CEU:0.92;0.846 FUNCTIONAL_SNP rs28458312 chr12 123863265 Intergenic 7 39719 CEU:1.0;0.92 FUNCTIONAL_SNP rs28636834 chr12 123871070 Intron 7 47524 CEU:1.0;0.92 LEAD_SNP rs11057830 chr12 125307053 Intron 7 ASSOCIATION 21729881 Vitamin E levels 8.09691001301 SCARB1 FUNCTIONAL_SNP rs10846744 chr12 125312425 Intron 4 5372 CEU:1.0;0.923 FUNCTIONAL_SNP rs11057841 chr12 125316743 Intron 7 9690 CEU:1.0;0.918, CHB:0.903;0.523 LEAD_SNP rs10846744 chr12 125312425 Intron 4 ASSOCIATION 20442857 Lipoprotein-associated phospholipase A2 activity and mass 8.0 SCARB1 FUNCTIONAL_SNP rs11057830 chr12 125307053 Intron 7 5372 CEU:1.0;0.923 FUNCTIONAL_SNP rs11057841 chr12 125316743 Intron 7 4318 CEU:1.0;0.838 LEAD_SNP rs4765623 chr12 125320850 Intron 5b ASSOCIATION 21131975 Renal cell carcinoma 7.52287874528 SCARB1 FUNCTIONAL_SNP rs10846749 chr12 125318448 Intron 4 2402 CEU:1.0;1.0, CHB:0.889;0.79, JPT:0.899;0.809, YRI:0.724;0.505 FUNCTIONAL_SNP rs10846748 chr12 125318309 Intron 4 2541 CEU:1.0;0.923, CHB:0.94;0.792, JPT:0.899;0.808, YRI:0.918;0.779 FUNCTIONAL_SNP rs4765621 chr12 125320715 Intron 5b 135 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10846751 chr12 125319771 Intron 7 1079 CEU:1.0;1.0, CHB:0.94;0.836, JPT:0.95;0.903, YRI:1.0;1.0 LEAD_SNP rs1823172 chr12 127792614 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 6.30102999566 PGBD3P3 - TMEM132C FUNCTIONAL_SNP rs12228790 chr12 127795500 Intergenic 5a 2886 CEU:1.0;1.0 FUNCTIONAL_SNP rs11059075 chr12 127778649 Intergenic 6 13965 CEU:1.0;1.0 FUNCTIONAL_SNP rs11059078 chr12 127794300 Intergenic 7 1686 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11059079 chr12 127796366 Intergenic 7 3752 CEU:1.0;1.0 FUNCTIONAL_SNP rs7133885 chr12 127771945 Intergenic 7 20669 CEU:1.0;1.0, CHB:1.0;0.648, JPT:0.841;0.707 FUNCTIONAL_SNP rs7969513 chr12 127763223 Intron 7 29391 CEU:1.0;1.0, CHB:1.0;0.619 FUNCTIONAL_SNP rs9788146 chr12 127787242 Intergenic 7 5372 CEU:1.0;1.0 FUNCTIONAL_SNP rs11059067 chr12 127772719 Intergenic 7 19895 CEU:1.0;1.0, CHB:1.0;0.641, JPT:0.841;0.707 FUNCTIONAL_SNP rs12581759 chr12 127801368 Intergenic 7 8754 CEU:1.0;1.0 LEAD_SNP rs7296262 chr12 129095072 Intron 7 ASSOCIATION 21423239 Suicide attempts in bipolar disorder 6.0 TMEM132C LEAD_SNP rs1385374 chr12 129300694 Intron 4 ASSOCIATION 19838193 Systemic lupus erythematosus 10.6989700043 SLC15A4 LEAD_SNP rs7299940 chr12 131390754 Intergenic 3b ASSOCIATION 19165232 Panic disorder 5.15490195999 RAN - GPR133 LEAD_SNP rs3847687 chr12 131525053 Intron 5b ASSOCIATION 20834067 Longevity 6.0 GPR133 FUNCTIONAL_SNP rs12370258 chr12 131527301 Intron 2b 2248 CEU:1.0;0.922, CHB:1.0;0.916, JPT:1.0;0.846, YRI:1.0;1.0 LEAD_SNP rs1569019 chr12 131576191 Intron 4 ASSOCIATION 19729412 Height 7.30102999566 GPR133 FUNCTIONAL_SNP rs1976930 chr12 131576445 Intron 4 254 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1569020 chr12 131574485 Intron 4 1706 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs10848278 chr12 131573810 Intron 5b 2381 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11613786 chr12 131581429 Intron 5b 5238 CEU:1.0;1.0 LEAD_SNP rs885389 chr12 131621762 Intron 4 ASSOCIATION 20031603 RR interval (heart rate) 7.39794000867 GPR133 FUNCTIONAL_SNP rs884837 chr12 131621244 Intron 4 518 CEU:0.898;0.807, CHB:1.0;0.797, JPT:0.943;0.889 FUNCTIONAL_SNP rs7957882 chr12 131617417 Intron 5b 4345 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;0.952, YRI:0.959;0.79 LEAD_SNP rs7965445 chr12 131862903 Intergenic 5b ASSOCIATION 20400778 Mortality among heart failure patients 5.69897000434 RPS6P20 - RPS6P21 FUNCTIONAL_SNP rs7977251 chr12 131871025 Intergenic 5b 8122 CEU:1.0;1.0 FUNCTIONAL_SNP rs7299374 chr12 131862407 Intergenic 5b 496 CEU:1.0;1.0, YRI:1.0;0.514 FUNCTIONAL_SNP rs7976504 chr12 131871074 Intergenic 5b 8171 CEU:1.0;1.0 FUNCTIONAL_SNP rs12422973 chr12 131864584 Intergenic 5b 1681 CEU:1.0;1.0 FUNCTIONAL_SNP rs12422521 chr12 131860362 Intergenic 5b 2541 CEU:1.0;1.0, YRI:1.0;0.609 FUNCTIONAL_SNP rs7489074 chr12 131905068 Intergenic 7 42165 CEU:1.0;0.879 LEAD_SNP rs10466868 chr12 131939920 Intergenic 7 ASSOCIATION 18464913 Protein quantitative trait loci 6.0 RPS6P20 - RPS6P21 LEAD_SNP rs7315621 chr12 132085196 Intergenic 5b ASSOCIATION 20834067 Longevity 6.0 RPS6P20 - RPS6P21 LEAD_SNP rs7326068 chr13 21209512 Intron 6 ASSOCIATION 20713499 Schizophrenia, bipolar disorder and depression (combined) 5.52287874528 IFT88 FUNCTIONAL_SNP rs7985552 chr13 21280738 Intron 5b 71226 CEU:1.0;0.832, CHB:0.887;0.747, JPT:1.0;1.0 FUNCTIONAL_SNP rs10870743 chr13 21258756 Intron 5b 49244 CEU:1.0;0.929, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6490600 chr13 21208189 Intron 5b 1323 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2149769 chr13 21266227 Intergenic 6 56715 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1052209 chr13 21216850 Intron 7 7338 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7332034 chr13 21214943 Intron 7 5431 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3825444 chr13 21173926 Intron 7 35586 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs1329518 chr13 21203611 Intron 7 5901 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs9552248 chr13 21159200 Intron 7 50312 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9552250 chr13 21175217 Intron 7 34295 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0 FUNCTIONAL_SNP rs9552251 chr13 21180247 Intron 7 29265 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9552252 chr13 21192905 Intron 7 16607 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.913 FUNCTIONAL_SNP rs7995773 chr13 21251235 Intron 7 41723 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1411038 chr13 21248431 Intron 7 38919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs2290144 chr13 21265658 Intergenic 7 56146 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs518590 chr13 22305099 Intergenic 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.69897000434 FGF9 - FTHL7 FUNCTIONAL_SNP rs491982 chr13 22313953 Intergenic 5b 8854 CEU:1.0;0.951 FUNCTIONAL_SNP rs912931 chr13 22309335 Intergenic 6 4236 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs596837 chr13 22315063 Intergenic 7 9964 CEU:1.0;0.951 FUNCTIONAL_SNP rs17584433 chr13 22311489 Intergenic 7 6390 CEU:1.0;0.951, YRI:1.0;0.675 FUNCTIONAL_SNP rs670821 chr13 22304216 Intergenic 7 883 CEU:1.0;0.951, YRI:1.0;0.754 LEAD_SNP rs17369571 chr13 22487625 Intergenic 4 ASSOCIATION 18464913 Protein quantitative trait loci 7.0 FGF9 - FTHL7 LEAD_SNP rs7318731 chr13 22709670 Intron 5a ASSOCIATION 20031603 RR interval (heart rate) 6.0 FGF9 - FTHL7 LEAD_SNP rs1034200 chr13 23228691 Intergenic 7 ASSOCIATION 20719862 Central corneal thickness 8.39794000867 FGF9 - FTHL7 FUNCTIONAL_SNP rs9510275 chr13 23227414 Intergenic 4 1277 CEU:1.0;0.867, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2334946 chr13 23228060 Intergenic 5b 631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1034198 chr13 23229751 Intergenic 6 1060 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.838 FUNCTIONAL_SNP rs9550855 chr13 23236792 Intergenic 7 8101 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7327928 chr13 23228314 Intergenic 7 377 CEU:1.0;0.867, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9552680 chr13 23235285 Intergenic 7 6594 CEU:0.949;0.818, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4770394 chr13 23692978 Intergenic 7 ASSOCIATION 21738484 Bipolar disorder 5.04575749056 NUS1P2 - SGCG FUNCTIONAL_SNP rs2311182 chr13 23701826 Intergenic 5a 8848 CEU:1.0;1.0 FUNCTIONAL_SNP rs6490779 chr13 23701153 Intergenic 5a 8175 CEU:1.0;1.0, YRI:1.0;0.525 FUNCTIONAL_SNP rs7326141 chr13 23698668 Intergenic 6 5690 CEU:1.0;1.0, YRI:1.0;0.514 FUNCTIONAL_SNP rs1336849 chr13 23707698 Intergenic 7 14720 CEU:1.0;1.0 FUNCTIONAL_SNP rs7987749 chr13 23689158 Intergenic 7 3820 CEU:1.0;1.0, YRI:1.0;0.669 FUNCTIONAL_SNP rs9510579 chr13 23691112 Intergenic 7 1866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9510583 chr13 23694491 Intergenic 7 1513 CEU:1.0;1.0, CHB:1.0;0.923, JPT:1.0;1.0, YRI:1.0;0.529 FUNCTIONAL_SNP rs7322449 chr13 23693091 Intergenic 7 113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4769240 chr13 23697921 Intergenic 7 4943 CEU:1.0;1.0, YRI:1.0;0.636 FUNCTIONAL_SNP rs4770393 chr13 23692789 Intergenic 7 189 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9507025 chr13 23693377 Intergenic 7 399 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7999976 chr13 23704126 Intergenic 7 11148 CEU:1.0;1.0, JPT:1.0;0.501, YRI:1.0;0.503 LEAD_SNP rs9507041 chr13 23744379 Intron 7 ASSOCIATION 21668797 Cannabis dependence 5.09691001301 NUS1P2 - SGCG FUNCTIONAL_SNP rs1361004 chr13 23748626 Intergenic 6 4247 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;1.0 FUNCTIONAL_SNP rs9510610 chr13 23752100 Intergenic 7 7721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;0.931 LEAD_SNP rs4770433 chr13 23903791 Exon,non-coding 7 ASSOCIATION 18464913 Protein quantitative trait loci 5.39794000867 SACS LEAD_SNP rs1572072 chr13 24127210 Intergenic 7 ASSOCIATION 20512145 Nasopharyngeal carcinoma 8.0 SACS - TNFRSF19 FUNCTIONAL_SNP rs1572071 chr13 24127179 Intergenic 7 31 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9510787 chr13 24205195 Intron 5a ASSOCIATION 20512145 Nasopharyngeal carcinoma 8.69897000434 TNFRSF19 FUNCTIONAL_SNP rs9510790 chr13 24209302 Intron 2b 4107 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs9510788 chr13 24207224 Intron 5b 2029 CEU:1.0;1.0, CHB:1.0;0.923, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12584129 chr13 24203273 Intron 5b 1922 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4400900 chr13 24191203 Intron 7 13992 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1983957 chr13 24200532 Intron 7 4663 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1983958 chr13 24198460 Intron 7 6735 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4411364 chr13 24191374 Intron 7 13821 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs753955 chr13 24293859 Intergenic 6 ASSOCIATION 21725308 Lung cancer 11.6989700043 TNFRSF19 - MIPEP FUNCTIONAL_SNP rs745069 chr13 24291972 Intergenic 6 1887 CEU:1.0;0.942, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9318086 chr13 24432467 Intron 5a ASSOCIATION 21640322 Myopia (pathological) 15.6989700043 MIPEP LEAD_SNP rs2765086 chr13 24504955 Intergenic 6 ASSOCIATION 19851299 Weight 5.22184874962 C1QTNF9B - FLJ46358 FUNCTIONAL_SNP rs1925749 chr13 24504530 Intergenic 5b 425 CEU:1.0;1.0, CHB:1.0;0.585, YRI:1.0;0.866 FUNCTIONAL_SNP rs2810711 chr13 24504157 Intergenic 7 798 CEU:1.0;1.0, CHB:1.0;0.585, YRI:1.0;0.825 LEAD_SNP rs17079773 chr13 24598384 Intron 7 ASSOCIATION 18821565 Inattentive symptoms 5.30102999566 FLJ46358 - SPATA13 LEAD_SNP rs9581094 chr13 25082630 Intron 4 ASSOCIATION 21658281 Sudden cardiac arrest 6.15490195999 PARP4 LEAD_SNP rs9319321 chr13 27415673 Intergenic 7 ASSOCIATION 19187332 Asthma (toluene diisocyanate-induced) 5.52287874528 GPR12 - RPS20P32 FUNCTIONAL_SNP rs1927512 chr13 27416731 Intergenic 7 1058 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17085007 chr13 27531267 Intergenic 5a ASSOCIATION 21297633 Ulcerative colitis 16.0 GPR12 - RPS20P32 ASSOCIATION 19915573 Ulcerative colitis 7.15490195999 GPR12 - RPS20P32 LEAD_SNP rs10507380 chr13 27879526 Intergenic 7 ASSOCIATION 17903306 Electrocardiographic traits 5.09691001301 RASL11A - GTF3A LEAD_SNP rs9512637 chr13 27920611 Intergenic 6 ASSOCIATION 21529783 Alcoholism (heaviness of drinking) 7.0 RASL11A - GTF3A FUNCTIONAL_SNP rs9319360 chr13 27914322 Intergenic 6 6289 CEU:1.0;0.957, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs2094497 chr13 27910122 Intergenic 7 10489 CEU:1.0;0.842, CHB:0.951;0.904, JPT:1.0;1.0 LEAD_SNP rs4771122 chr13 28020180 Intron 6 ASSOCIATION 20935630 Body mass index 9.04575749056 MTIF3 FUNCTIONAL_SNP rs7669 chr13 28009851 Coding 7 10329 CEU:1.0;0.854 FUNCTIONAL_SNP rs7988412 chr13 28000282 Exon,non-coding 4 19898 CEU:1.0;0.854 FUNCTIONAL_SNP rs1006353 chr13 28047269 Intergenic 2b 27089 CEU:0.947;0.813 FUNCTIONAL_SNP rs9579083 chr13 28017270 Intron 4 2910 CEU:1.0;0.905, CHB:0.895;0.502 FUNCTIONAL_SNP rs7992289 chr13 28036430 Intergenic 5b 16250 CEU:0.949;0.858, CHB:0.901;0.521 FUNCTIONAL_SNP rs1475220 chr13 28037448 Intergenic 6 17268 CEU:0.944;0.845, CHB:0.9;0.519, YRI:0.84;0.56 FUNCTIONAL_SNP rs1475219 chr13 28037415 Intergenic 7 17235 CEU:0.947;0.852, YRI:0.827;0.533 FUNCTIONAL_SNP rs1475221 chr13 28037566 Intergenic 7 17386 CEU:0.947;0.852, YRI:0.827;0.533 FUNCTIONAL_SNP rs1885988 chr13 28010262 Intron 7 9918 CEU:1.0;0.854 FUNCTIONAL_SNP rs1885989 chr13 28010117 Intron 7 10063 CEU:1.0;0.854 LEAD_SNP rs7336332 chr13 28058404 Intergenic 7 ASSOCIATION 19079260 Weight 6.0 MTIF3 - LNX2 LEAD_SNP rs9512730 chr13 28077144 Intergenic 6 ASSOCIATION 18347602 Schizophrenia 5.30102999566 MTIF3 - LNX2 FUNCTIONAL_SNP rs4771136 chr13 28070769 Intergenic 5b 6375 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 LEAD_SNP rs7097 chr13 28197436 Exon,non-coding 5a ASSOCIATION 21471979 Large B-cell lymphoma 5.15490195999 POLR1D FUNCTIONAL_SNP rs694609 chr13 28194806 Intergenic 4 2630 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs9512900 chr13 28429738 Intron 5b ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.04575749056 GSX1 - PDX1 LEAD_SNP rs17086609 chr13 28929711 Intron 5b ASSOCIATION 19734545 Cognitive performance 5.30102999566 FLT1 LEAD_SNP rs1305088 chr13 29278450 Exon,non-coding 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.04575749056 SLC46A3 LEAD_SNP rs1161463 chr13 29431338 Intergenic 7 ASSOCIATION 18846501 Attention deficit hyperactivity disorder symptoms (interaction) 5.69897000434 CYP51P2 - MTUS2 FUNCTIONAL_SNP rs1161464 chr13 29430932 Intergenic 6 406 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.907, YRI:1.0;1.0 FUNCTIONAL_SNP rs1161465 chr13 29430386 Intergenic 7 952 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1161469 chr13 29426304 Intergenic 7 5034 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1161470 chr13 29424644 Intergenic 7 6694 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9314986 chr13 30458737 Intron 5b ASSOCIATION 20460270 Biliary atresia 5.69897000434 UBL3 - KATNAL1 LEAD_SNP rs11618202 chr13 31113379 Intron 7 ASSOCIATION 21116278 MRI atrophy measures 5.15490195999 HMGB1 - USPL1 LEAD_SNP rs990324 chr13 33387246 Intergenic 6 ASSOCIATION 21116278 Total ventricular volume 5.30102999566 PDS5B - TOMM22P3 LEAD_SNP rs9315204 chr13 33693837 Intron 5b ASSOCIATION 20364137 Intracranial aneurysm 8.52287874528 STARD13 FUNCTIONAL_SNP rs1980781 chr13 33700374 Coding 2a 6537 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3742321 chr13 33704065 Coding 7 10228 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs536850 chr13 33677971 Exon,non-coding 6 15866 CEU:1.0;0.899 FUNCTIONAL_SNP rs602133 chr13 33697449 Exon,non-coding 4 3612 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17764067 chr13 33728353 Intron 4 34516 CEU:1.0;0.946, CHB:1.0;0.924, JPT:0.859;0.693 FUNCTIONAL_SNP rs9527098 chr13 33694120 Intron 4 283 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs554588 chr13 33681167 Intron 4 12670 CEU:1.0;0.899 FUNCTIONAL_SNP rs4943076 chr13 33689996 Intron 5a 3841 CEU:1.0;0.85, CHB:0.911;0.764, JPT:1.0;0.833 FUNCTIONAL_SNP rs2069309 chr13 33693251 Intron 5b 586 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs642899 chr13 33680854 Intron 5b 12983 CEU:1.0;0.893 FUNCTIONAL_SNP rs12863103 chr13 33723244 Intron 5b 29407 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9536548 chr13 33723786 Intron 6 29949 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs9536486 chr13 33702869 Intron 6 9032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs614691 chr13 33672530 Intergenic 7 21307 CEU:1.0;0.899 FUNCTIONAL_SNP rs671937 chr13 33682737 Intron 7 11100 CEU:1.0;0.899, CHB:0.903;0.687, JPT:1.0;0.833 LEAD_SNP rs690705 chr13 34654918 Intergenic 7 ASSOCIATION term=200 Alzheimer's disease 6.22184874962 RFC3 - GAMTP2 LEAD_SNP rs1777672 chr13 36177819 Intron 6 ASSOCIATION 20041166 HIV-1 control 6.39794000867 NBEA LEAD_SNP rs1926320 chr13 36652617 Intron 7 ASSOCIATION 20548946 Vertical cup-disc ratio 8.0 DCLK1 FUNCTIONAL_SNP rs9546383 chr13 36683268 Intron 5b 30651 CEU:1.0;0.826, CHB:1.0;0.866, JPT:1.0;0.65 FUNCTIONAL_SNP rs7323428 chr13 36643601 Intron 5b 9016 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;0.785, YRI:1.0;1.0 FUNCTIONAL_SNP rs1926318 chr13 36644142 Intron 5b 8475 CEU:1.0;0.804, CHB:1.0;0.91, JPT:1.0;0.747, YRI:1.0;1.0 FUNCTIONAL_SNP rs9575267 chr13 36664034 Intron 5b 11417 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.68 FUNCTIONAL_SNP rs1410643 chr13 36697063 Intron 6 44446 CEU:1.0;0.933, CHB:1.0;1.0, JPT:0.952;0.906 FUNCTIONAL_SNP rs12430710 chr13 36695575 Intron 6 42958 CEU:1.0;0.933, CHB:1.0;0.866, JPT:1.0;0.682 FUNCTIONAL_SNP rs7330329 chr13 36644724 Intron 7 7893 CEU:1.0;0.804, CHB:1.0;1.0, JPT:1.0;0.785, YRI:1.0;1.0 FUNCTIONAL_SNP rs9546421 chr13 36690750 Intron 7 38133 CEU:1.0;0.869, CHB:1.0;0.872, JPT:1.0;0.694 FUNCTIONAL_SNP rs8001720 chr13 36668781 Intron 7 16164 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.956, YRI:1.0;0.62 FUNCTIONAL_SNP rs9546430 chr13 36692673 Intron 7 40056 CEU:1.0;0.869, CHB:1.0;0.872, JPT:1.0;0.694 LEAD_SNP rs9315385 chr13 36663302 Intron 7 ASSOCIATION 17903306 Heart rate variability traits 5.09691001301 DCLK1 FUNCTIONAL_SNP rs9565841 chr13 36655076 Intron 6 8226 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9565839 chr13 36651830 Intron 7 11472 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1590305 chr13 38035189 Intergenic 7 ASSOCIATION 17903296 Hip geometry 5.52287874528 RPS12P24 - POSTN FUNCTIONAL_SNP rs4421867 chr13 38039241 Intergenic 5b 4052 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1322804 chr13 38034596 Intergenic 5b 593 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7989845 chr13 38038299 Intergenic 6 3110 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;1.0 FUNCTIONAL_SNP rs9603204 chr13 38043268 Intergenic 6 8079 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9603205 chr13 38043585 Intergenic 6 8396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9603209 chr13 38044793 Intergenic 6 9604 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7324856 chr13 38045165 Intergenic 6 9976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9805695 chr13 38037517 Intergenic 6 2328 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9594211 chr13 38044745 Intergenic 6 9556 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1575381 chr13 38038779 Intergenic 6 3590 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1575382 chr13 38038608 Intergenic 6 3419 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs5010916 chr13 38039299 Intergenic 6 4110 CEU:1.0;1.0, CHB:1.0;0.943, JPT:0.926;0.801, YRI:1.0;1.0 FUNCTIONAL_SNP rs9603206 chr13 38043602 Intergenic 6 8413 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7988812 chr13 38038017 Intergenic 7 2828 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4436664 chr13 38039530 Intergenic 7 4341 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9603191 chr13 38028749 Intergenic 7 6440 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs9603195 chr13 38034928 Intergenic 7 261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9603201 chr13 38040495 Intergenic 7 5306 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1923718 chr13 38043047 Intergenic 7 7858 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1923719 chr13 38043179 Intergenic 7 7990 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;1.0 FUNCTIONAL_SNP rs9603208 chr13 38044689 Intergenic 7 9500 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4575409 chr13 38038555 Intergenic 7 3366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs4514540 chr13 38039470 Intergenic 7 4281 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9594206 chr13 38038447 Intergenic 7 3258 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9594210 chr13 38044596 Intergenic 7 9407 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1575380 chr13 38038913 Intergenic 7 3724 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs7334359 chr13 38035589 Intergenic 7 400 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs7329262 chr13 38042304 Intergenic 7 7115 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9548119 chr13 38531581 Intergenic 6 ASSOCIATION 20707712 Self-rated health 5.04575749056 TRPC4 - HSPD1P9 FUNCTIONAL_SNP rs9566276 chr13 38498837 Intergenic 5b 32744 CEU:1.0;0.846, CHB:0.939;0.832, JPT:1.0;0.842, YRI:1.0;1.0 LEAD_SNP rs9315632 chr13 39516627 Intergenic 6 ASSOCIATION 20694148 Metabolic syndrome 5.52287874528 FREM2 - STOML3 LEAD_SNP rs7993214 chr13 40350912 Intron 4 ASSOCIATION 18369459 Psoriasis 5.69897000434 COG6 LEAD_SNP rs9548988 chr13 40505510 Intergenic 5a ASSOCIATION 19915572 Ulcerative colitis 6.52287874528 COG6 - FOXO1 FUNCTIONAL_SNP rs9566486 chr13 40504416 Intergenic 4 1094 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9548998 chr13 40510038 Intergenic 6 4528 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs9548987 chr13 40503572 Intergenic 6 1938 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.835 FUNCTIONAL_SNP rs9532468 chr13 40507858 Intergenic 7 2348 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9532463 chr13 40505133 Intergenic 7 377 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs9532461 chr13 40504670 Intergenic 7 840 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9532462 chr13 40505004 Intergenic 7 506 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9532470 chr13 40509301 Intergenic 7 3791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs9532471 chr13 40509753 Intergenic 7 4243 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9548994 chr13 40507799 Intergenic 7 2289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10492681 chr13 40807483 Intergenic 7 ASSOCIATION 17903293 Select biomarker traits 5.69897000434 COG6 - FOXO1 LEAD_SNP rs941823 chr13 41013977 Intergenic 7 ASSOCIATION 21297633 Ulcerative colitis 11.3979400087 COG6 - FOXO1 FUNCTIONAL_SNP rs4941977 chr13 41031535 Intron 5b 17558 CEU:1.0;1.0, CHB:0.901;0.812, JPT:1.0;1.0 FUNCTIONAL_SNP rs9603757 chr13 41024432 Intergenic 6 10455 CEU:1.0;1.0, CHB:0.918;0.844, JPT:1.0;1.0 LEAD_SNP rs2755237 chr13 41109429 Intergenic 7 ASSOCIATION 20719862 Central corneal thickness 8.0 COG6 - FOXO1 LEAD_SNP rs2721051 chr13 41110884 Intergenic 4 ASSOCIATION 20485516 Central corneal thickness 9.30102999566 LOC100289058 FUNCTIONAL_SNP rs2721043 chr13 41078668 Intergenic 4 32216 CEU:1.0;0.89 FUNCTIONAL_SNP rs2755238 chr13 41110270 Intergenic 6 614 CEU:1.0;1.0, YRI:0.863;0.656 FUNCTIONAL_SNP rs11616662 chr13 41119466 Intergenic 6 8582 CEU:1.0;0.879 LEAD_SNP rs7329174 chr13 41558110 Intron 4 ASSOCIATION 21044949 Systemic lupus erythematosus 8.0 ELF1 LEAD_SNP rs6561030 chr13 42631719 Intron 7 ASSOCIATION 20189936 Height 5.15490195999 DGKH FUNCTIONAL_SNP rs2166626 chr13 42586392 Intergenic 5b 45327 CEU:1.0;0.917, CHB:0.94;0.834, JPT:1.0;0.804, YRI:1.0;0.852 FUNCTIONAL_SNP rs9532972 chr13 42599328 Intergenic 6 32391 CEU:1.0;0.923, CHB:1.0;0.95, JPT:1.0;0.937, YRI:1.0;0.841 LEAD_SNP rs1012053 chr13 42653437 Intron 7 ASSOCIATION 17486107 Bipolar disorder 7.69897000434 DGKH FUNCTIONAL_SNP rs669642 chr13 42660845 Intron 4 7408 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs681657 chr13 42662600 Intron 7 9163 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2253650 chr13 42656841 Intron 7 3404 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9533090 chr13 42951449 Intergenic 7 ASSOCIATION 19801982 Bone mineral density (spine) 24.3010299957 FABP3P2 - TNFSF11 FUNCTIONAL_SNP rs9594738 chr13 42952145 Intergenic 4 696 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9594738 chr13 42952145 Intergenic 4 ASSOCIATION 21533022 Bone mineral density 5.39794000867 FABP3P2 - TNFSF11 ASSOCIATION 18445777 Bone mineral density (hip) 7.69897000434 FABP3P2 - TNFSF11 FUNCTIONAL_SNP rs9533090 chr13 42951449 Intergenic 7 696 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9594759 chr13 43032593 Intergenic 7 ASSOCIATION 19079262 Bone mineral density (spine) 16.6989700043 FABP3P2 - TNFSF11 ASSOCIATION 18445777 Bone mineral density (spine) 20.6989700043 FABP3P2 - TNFSF11 LEAD_SNP rs2062305 chr13 43052880 Intergenic 4 ASSOCIATION 21102463 Crohn's disease 9.30102999566 FABP3P2 - TNFSF11 FUNCTIONAL_SNP rs7327510 chr13 42988924 Intergenic 5b 63956 CEU:0.919;0.812, CHB:0.924;0.794 FUNCTIONAL_SNP rs12429224 chr13 43032053 Intergenic 6 20827 CEU:1.0;0.962, CHB:0.923;0.792, JPT:1.0;1.0, YRI:1.0;0.809 FUNCTIONAL_SNP rs9533104 chr13 43017895 Intergenic 6 34985 CEU:1.0;0.956, CHB:1.0;0.922, JPT:1.0;1.0, YRI:1.0;0.905 FUNCTIONAL_SNP rs9594746 chr13 42989660 Intergenic 6 63220 CEU:0.959;0.849, CHB:0.92;0.688, YRI:0.934;0.603 FUNCTIONAL_SNP rs1853573 chr13 43034968 Intergenic 7 17912 CEU:1.0;0.962, CHB:1.0;0.928, JPT:1.0;1.0, YRI:0.902;0.775 FUNCTIONAL_SNP rs9594759 chr13 43032593 Intergenic 7 20287 CEU:1.0;0.962, CHB:0.924;0.794, JPT:1.0;0.833, YRI:1.0;0.598 FUNCTIONAL_SNP rs9594766 chr13 43040043 Intergenic 7 12837 CEU:1.0;0.962, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs9533100 chr13 42996548 Intergenic 7 56332 CEU:1.0;0.962, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.901 FUNCTIONAL_SNP rs9533108 chr13 43024710 Intergenic 7 28170 CEU:0.961;0.923, CHB:1.0;0.927, JPT:1.0;0.91, YRI:1.0;0.906 FUNCTIONAL_SNP rs7328203 chr13 42988546 Intergenic 7 64334 CEU:0.919;0.812, CHB:0.922;0.739 FUNCTIONAL_SNP rs12430303 chr13 43032027 Intergenic 7 20853 CEU:1.0;0.962, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs9525619 chr13 42992135 Intergenic 7 60745 CEU:1.0;0.962, CHB:1.0;0.928, JPT:1.0;1.0, YRI:0.946;0.85 FUNCTIONAL_SNP rs9525625 chr13 43018030 Intergenic 7 34850 CEU:1.0;0.962, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;0.906 LEAD_SNP rs1021188 chr13 43116133 Intergenic 6 ASSOCIATION 21124946 Bone mineral density 13.6989700043 FABP3P2 - TNFSF11 FUNCTIONAL_SNP rs7999416 chr13 43136346 Intergenic 4 20213 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841, YRI:1.0;0.738 FUNCTIONAL_SNP rs4941433 chr13 43159135 Intron 4 43002 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841, YRI:0.937;0.614 FUNCTIONAL_SNP rs9525639 chr13 43132879 Intergenic 5a 16746 CEU:1.0;1.0 FUNCTIONAL_SNP rs1022926 chr13 43158734 Intron 5a 42601 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841 FUNCTIONAL_SNP rs346591 chr13 43167474 Intron 5b 51341 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841 FUNCTIONAL_SNP rs346592 chr13 43167513 Intron 5b 51380 CEU:0.915;0.837 FUNCTIONAL_SNP rs8002449 chr13 43164541 Intron 6 48408 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841 FUNCTIONAL_SNP rs4942143 chr13 43154806 Intron 6 38673 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841 FUNCTIONAL_SNP rs346588 chr13 43165468 Intron 6 49335 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841 FUNCTIONAL_SNP rs346589 chr13 43166284 Intron 6 50151 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841 FUNCTIONAL_SNP rs346590 chr13 43166295 Intron 6 50162 CEU:1.0;0.927, CHB:0.876;0.687, JPT:1.0;0.85 FUNCTIONAL_SNP rs1038434 chr13 43167333 Intron 6 51200 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841 FUNCTIONAL_SNP rs2324851 chr13 43160930 Intron 6 44797 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841 FUNCTIONAL_SNP rs4356365 chr13 43164171 Intron 7 48038 CEU:1.0;0.927, CHB:0.876;0.687, JPT:1.0;0.85 FUNCTIONAL_SNP rs17596685 chr13 43117201 Intergenic 7 1068 CEU:1.0;0.926, CHB:1.0;0.793, JPT:1.0;0.841, YRI:1.0;0.511 FUNCTIONAL_SNP rs6561058 chr13 43126173 Intergenic 7 10040 CEU:1.0;0.927, CHB:0.876;0.687, JPT:1.0;0.85 FUNCTIONAL_SNP rs7996068 chr13 43139390 Intron 7 23257 CEU:0.926;0.858, CHB:0.817;0.631, JPT:1.0;0.897 FUNCTIONAL_SNP rs4531631 chr13 43135131 Intergenic 7 18998 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841, YRI:1.0;0.738 FUNCTIONAL_SNP rs2277439 chr13 43155443 Intron 7 39310 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841, YRI:0.796;0.576 FUNCTIONAL_SNP rs12585014 chr13 43140559 Intron 7 24426 CEU:1.0;0.927, CHB:0.876;0.687, JPT:1.0;0.85 FUNCTIONAL_SNP rs8000846 chr13 43139586 Intron 7 23453 CEU:1.0;0.927, CHB:0.876;0.687, JPT:1.0;0.85, YRI:0.941;0.657 FUNCTIONAL_SNP rs7324282 chr13 43137704 Intron 7 21571 CEU:1.0;1.0, CHB:0.851;0.725, JPT:1.0;0.89, YRI:0.942;0.659 FUNCTIONAL_SNP rs2148073 chr13 43163799 Intron 7 47666 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841 FUNCTIONAL_SNP rs7988338 chr13 43144842 Intron 7 28709 CEU:1.0;0.926, CHB:0.867;0.667, JPT:1.0;0.841 FUNCTIONAL_SNP rs9533172 chr13 43185132 Intergenic 7 68999 CEU:1.0;0.814, CHB:0.817;0.631, JPT:1.0;0.85 FUNCTIONAL_SNP rs168312 chr13 43121760 Intergenic 7 5627 CEU:1.0;0.926, CHB:1.0;0.793, JPT:1.0;0.841, YRI:0.945;0.734 LEAD_SNP rs1324015 chr13 43727849 Intergenic 4 ASSOCIATION 19734545 Cognitive performance 5.04575749056 DNAJC15 - ENOX1 LEAD_SNP rs3764147 chr13 44457925 Coding 5b ASSOCIATION 20018961 Leprosy 53.3979400087 C13orf31 ASSOCIATION 18587394 Crohn's disease 12.6989700043 C13orf31 FUNCTIONAL_SNP rs6561151 chr13 44484706 Intergenic 5b 26781 CEU:1.0;1.0, CHB:1.0;0.854, JPT:1.0;0.941, YRI:0.958;0.846 FUNCTIONAL_SNP rs1373904 chr13 44475398 Intergenic 7 17473 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.887 FUNCTIONAL_SNP rs7995004 chr13 44478820 Intergenic 7 20895 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.941, YRI:0.958;0.846 LEAD_SNP rs17065323 chr13 44627788 Intergenic 7 ASSOCIATION 18759275 Serum uric acid 5.39794000867 NCRNA00284 - SERP2 LEAD_SNP rs958546 chr13 46833717 Intron 7 ASSOCIATION 17903304 Atrial fibrillation 5.30102999566 LRRC63 LEAD_SNP rs2478333 chr13 48162558 Intergenic 7 ASSOCIATION 20031603 QT interval 7.39794000867 GNG5P5 - RPL27AP8 FUNCTIONAL_SNP rs2677588 chr13 48172964 Intergenic 7 10406 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2677602 chr13 48177834 Intergenic 7 15276 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2677603 chr13 48178745 Intergenic 7 16187 CEU:1.0;0.958, CHB:1.0;0.79, JPT:1.0;1.0 LEAD_SNP rs1575891 chr13 48198716 Intergenic 7 ASSOCIATION 21348951 Cardiac hypertrophy 5.22184874962 GNG5P5 - RPL27AP8 FUNCTIONAL_SNP rs2677595 chr13 48202160 Intergenic 5a 3444 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs2766095 chr13 48184645 Intergenic 7 14071 CEU:0.903;0.816 FUNCTIONAL_SNP rs1853987 chr13 48203945 Intergenic 7 5229 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.926 FUNCTIONAL_SNP rs1853988 chr13 48203988 Intergenic 7 5272 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.926 FUNCTIONAL_SNP rs1172417 chr13 48219705 Intergenic 7 20989 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs1172424 chr13 48216540 Intergenic 7 17824 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.923 FUNCTIONAL_SNP rs1409482 chr13 48200537 Intergenic 7 1821 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs2031532 chr13 50080847 Coding 5b ASSOCIATION 21348951 Cardiac hypertrophy 5.30102999566 PHF11 FUNCTIONAL_SNP rs2057413 chr13 50057097 Coding 7 23750 CEU:0.947;0.81, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3764090 chr13 50008301 Coding 7 72546 CEU:0.947;0.81, JPT:1.0;1.0 FUNCTIONAL_SNP rs7992603 chr13 50022089 Intron 5b 58758 CEU:0.947;0.81, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7321228 chr13 50060676 Intron 6 20171 CEU:0.947;0.81, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7996852 chr13 50054346 Intron 6 26501 CEU:0.947;0.81, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs959421 chr13 50062327 Intron 6 18520 CEU:0.947;0.81, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7998660 chr13 50007393 Intron 7 73454 CEU:0.946;0.808, JPT:1.0;1.0 FUNCTIONAL_SNP rs4142285 chr13 50054308 Intron 7 26539 CEU:0.947;0.81, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1543514 chr13 50025495 Intron 7 55352 CEU:1.0;0.843, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9316453 chr13 50013622 Intron 7 67225 CEU:0.945;0.805, JPT:1.0;1.0 FUNCTIONAL_SNP rs8000149 chr13 50090025 Intron 7 9178 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0 LEAD_SNP rs2762051 chr13 50835715 Intron 5b ASSOCIATION 20190752 Celiac disease 6.15490195999 ST13P4 - RPL34P26 FUNCTIONAL_SNP rs1568672 chr13 50753404 Intron 5a 82311 CEU:1.0;0.847 FUNCTIONAL_SNP rs2703075 chr13 50835968 Intron 5b 253 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2703078 chr13 50830073 Intron 5b 5642 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2066647 chr13 50782074 Intron 6 53641 CEU:1.0;0.846, CHB:1.0;1.0 FUNCTIONAL_SNP rs2066671 chr13 50832618 Intron 7 3097 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs723801 chr13 50833407 Intron 7 2308 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1262778 chr13 51066623 Intron 6 ASSOCIATION 20351715 Bipolar disorder and major depressive disorder (combined) 5.09691001301 RPL34P26 - DLEU7 FUNCTIONAL_SNP rs183950 chr13 51086092 Intron 4 19469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1753633 chr13 51086290 Intron 4 19667 CEU:1.0;1.0, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3116597 chr13 51086364 Intron 4 19741 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs495838 chr13 51086107 Intron 4 19484 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs157164 chr13 51084523 Intron 5a 17900 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1638703 chr13 51088356 Intron 7 21733 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:0.95;0.902 FUNCTIONAL_SNP rs1262775 chr13 51068575 Intron 7 1952 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1262776 chr13 51068476 Intron 7 1853 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1630605 chr13 51075385 Intron 7 8762 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1239947 chr13 51106555 Intergenic 7 ASSOCIATION 18391951 Height 5.09691001301 RPL34P26 - DLEU7 LEAD_SNP rs3116602 chr13 51111355 Intergenic 5b ASSOCIATION 18391952 Height 8.15490195999 RPL34P26 - DLEU7 LEAD_SNP rs3118914 chr13 51116901 Intergenic 5a ASSOCIATION 19343178 Height 9.39794000867 RPL34P26 - DLEU7 LEAD_SNP rs10507577 chr13 53968091 Intergenic 7 ASSOCIATION 17903293 Select biomarker traits 5.52287874528 OLFM4 - RPL13AP25 LEAD_SNP rs9536591 chr13 54581087 Intergenic 7 ASSOCIATION 17434096 Stroke 5.22184874962 OLFM4 - RPL13AP25 LEAD_SNP rs1512651 chr13 56772696 Intergenic 7 ASSOCIATION 20833655 Warfarin maintenance dose 5.22184874962 HNF4GP1 - PRR20A FUNCTIONAL_SNP rs1158159 chr13 56754803 Intergenic 7 17893 CEU:0.918;0.811, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10492604 chr13 58904313 Intergenic 7 ASSOCIATION 17903308 Sleep duration 5.39794000867 TRNAE39P - DIAPH3 FUNCTIONAL_SNP rs17193574 chr13 58902877 Intergenic 7 1436 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3106598 chr13 61678912 Intergenic 7 ASSOCIATION 20834067 Longevity 6.0 EIF4A1P6 - PCDH20 FUNCTIONAL_SNP rs1399315 chr13 61678349 Intergenic 6 563 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9317284 chr13 63634350 Intergenic 5a ASSOCIATION 17903296 Bone mineral density 6.69897000434 RPL32P28 - OR7E156P LEAD_SNP rs1333026 chr13 66120784 Intergenic 7 ASSOCIATION 17903300 Body mass index 5.09691001301 STARP1 - PCDH9 FUNCTIONAL_SNP rs9540475 chr13 66118029 Intergenic 6 2755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs11148683 chr13 66102973 Intergenic 7 17811 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1585440 chr13 66481815 Intergenic 4 ASSOCIATION 20686608 Pancreatic cancer 5.04575749056 STARP1 - PCDH9 FUNCTIONAL_SNP rs9592437 chr13 66467113 Intergenic 2b 14702 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9592438 chr13 66482340 Intergenic 4 525 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9592432 chr13 66414734 Intergenic 5b 67081 CEU:1.0;0.957, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs12870205 chr13 66441833 Intron 6 39982 CEU:1.0;0.955, CHB:0.938;0.879, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12184803 chr13 66428399 Intergenic 6 53416 CEU:1.0;0.916, CHB:1.0;0.942, JPT:1.0;1.0, YRI:0.913;0.833 FUNCTIONAL_SNP rs11617764 chr13 66448080 Intron 6 33735 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1953125 chr13 66454590 Intergenic 6 27225 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.839 FUNCTIONAL_SNP rs2126003 chr13 66446416 Intron 7 35399 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9599028 chr13 66432127 Intergenic 7 49688 CEU:1.0;0.957, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs8001212 chr13 66474538 Intergenic 7 7277 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9599040 chr13 66480699 Intergenic 7 1116 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.934;0.82, YRI:1.0;1.0 FUNCTIONAL_SNP rs12870340 chr13 66450510 Intron 7 31305 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10467402 chr13 66439985 Intergenic 7 41830 CEU:1.0;0.957, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.914 LEAD_SNP rs17081231 chr13 66967622 Intron 7 ASSOCIATION 21552555 Obesity 6.15490195999 PCDH9 FUNCTIONAL_SNP rs12584811 chr13 66945983 Intron 5b 21639 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12584011 chr13 66949097 Intron 7 18525 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2066219 chr13 69530664 Intergenic 5b ASSOCIATION 17903298 Diabetes related insulin traits 5.04575749056 RPL12P34 - KLHL1 FUNCTIONAL_SNP rs9541658 chr13 69543849 Intergenic 6 13185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs4884818 chr13 69544493 Intergenic 6 13829 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs9572061 chr13 69539273 Intergenic 6 8609 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs9541656 chr13 69539635 Intergenic 7 8971 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 LEAD_SNP rs9572423 chr13 70846203 Intergenic 7 ASSOCIATION 20125088 Major depressive disorder 5.04575749056 ATXN8OS - DACH1 FUNCTIONAL_SNP rs9572412 chr13 70832761 Intergenic 6 13442 CEU:1.0;0.866 FUNCTIONAL_SNP rs4261413 chr13 70853701 Intergenic 7 7498 CEU:1.0;0.866 FUNCTIONAL_SNP rs17086649 chr13 70830366 Intergenic 7 15837 CEU:1.0;0.866 FUNCTIONAL_SNP rs9564674 chr13 70830706 Intergenic 7 15497 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0 LEAD_SNP rs9592783 chr13 71883214 Intergenic 6 ASSOCIATION 20834067 Longevity 6.0 ATXN8OS - DACH1 FUNCTIONAL_SNP rs9599815 chr13 71873367 Intergenic 5a 9847 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2325361 chr13 71876601 Intergenic 6 6613 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9599818 chr13 71878914 Intergenic 7 4300 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9599820 chr13 71881549 Intergenic 7 1665 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs626277 chr13 72347696 Intron 7 ASSOCIATION 20383146 Chronic kidney disease 10.5228787453 DACH1 FUNCTIONAL_SNP rs9599884 chr13 72369626 Intron 5a 21930 CEU:1.0;0.923, CHB:1.0;0.864, JPT:1.0;0.708 FUNCTIONAL_SNP rs303942 chr13 72369456 Intron 5a 21760 CEU:1.0;0.961, CHB:1.0;0.864, JPT:1.0;0.708 FUNCTIONAL_SNP rs9529913 chr13 72345089 Intron 5b 2607 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs303952 chr13 72364384 Intron 5b 16688 CEU:1.0;0.917 FUNCTIONAL_SNP rs500830 chr13 72348768 Intron 5b 1072 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs9599882 chr13 72366166 Intron 6 18470 CEU:1.0;0.959, CHB:0.84;0.706, JPT:1.0;0.909 FUNCTIONAL_SNP rs7335349 chr13 72370681 Intron 6 22985 CEU:1.0;0.923, CHB:1.0;0.864, JPT:1.0;0.708 FUNCTIONAL_SNP rs303934 chr13 72376672 Intron 6 28976 CEU:0.951;0.862, CHB:1.0;0.673, JPT:1.0;0.91 FUNCTIONAL_SNP rs716877 chr13 72347448 Intron 6 248 CEU:1.0;1.0, CHB:1.0;0.551, JPT:1.0;1.0 FUNCTIONAL_SNP rs584480 chr13 72345505 Intron 7 2191 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.918 FUNCTIONAL_SNP rs9572784 chr13 72341727 Intron 7 5969 CEU:1.0;0.961, CHB:1.0;0.673, JPT:1.0;0.904 FUNCTIONAL_SNP rs9572786 chr13 72342605 Intron 7 5091 CEU:1.0;0.961, JPT:1.0;0.91 FUNCTIONAL_SNP rs9572787 chr13 72366606 Intron 7 18910 CEU:1.0;0.923, CHB:1.0;0.864, JPT:1.0;0.708 FUNCTIONAL_SNP rs9572788 chr13 72367372 Intron 7 19676 CEU:1.0;0.921, CHB:1.0;0.864, JPT:1.0;0.708 FUNCTIONAL_SNP rs932768 chr13 72347501 Intron 7 195 CEU:1.0;0.961, JPT:1.0;0.904 FUNCTIONAL_SNP rs303939 chr13 72371471 Intron 7 23775 CEU:0.959;0.884, CHB:1.0;0.864, JPT:1.0;0.708 FUNCTIONAL_SNP rs303940 chr13 72371415 Intron 7 23719 CEU:1.0;0.961, CHB:1.0;0.864, JPT:1.0;0.708 FUNCTIONAL_SNP rs303953 chr13 72363561 Intron 7 15865 CEU:1.0;0.961, CHB:1.0;0.864, JPT:1.0;0.708 FUNCTIONAL_SNP rs303958 chr13 72359353 Intron 7 11657 CEU:1.0;0.959, CHB:1.0;0.864, JPT:1.0;0.767, YRI:0.816;0.565 LEAD_SNP rs9600079 chr13 73728139 Intergenic 7 ASSOCIATION 20676098 Prostate cancer 8.52287874528 FABP5L1 - KLF12 LEAD_SNP rs9543325 chr13 73916628 Intergenic 6 ASSOCIATION 20101243 Pancreatic cancer 10.5228787453 FABP5L1 - KLF12 LEAD_SNP rs1886449 chr13 73932114 Intergenic 7 ASSOCIATION 20686608 Pancreatic cancer 5.04575749056 FABP5L1 - KLF12 LEAD_SNP rs1886512 chr13 74520186 Intron 5b ASSOCIATION 21076409 Ventricular conduction 8.0 KLF12 FUNCTIONAL_SNP rs9573330 chr13 74518210 Intron 5b 1976 CEU:1.0;1.0, CHB:1.0;0.831, JPT:1.0;1.0, YRI:1.0;0.576 FUNCTIONAL_SNP rs728926 chr13 74513122 Intron 7 7064 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;1.0, YRI:1.0;0.592 FUNCTIONAL_SNP rs17061696 chr13 74511991 Intron 7 8195 CEU:1.0;0.955, CHB:1.0;0.831, JPT:1.0;1.0, YRI:1.0;0.593 LEAD_SNP rs8000245 chr13 74730392 Intergenic 7 ASSOCIATION 20395239 Optic disc size (rim) 5.09691001301 KLF12 - RPL21P108 FUNCTIONAL_SNP rs9573352 chr13 74720424 Intergenic 5a 9968 CEU:1.0;0.828, CHB:0.86;0.74, JPT:0.856;0.643 FUNCTIONAL_SNP rs7320612 chr13 74731234 Intergenic 6 842 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7337014 chr13 74730244 Intergenic 6 148 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7330557 chr13 74729456 Intergenic 6 936 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9543542 chr13 74731637 Intergenic 6 1245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs17062235 chr13 74734440 Intergenic 7 4048 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3905123 chr13 74731291 Intergenic 7 899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9543540 chr13 74729103 Intergenic 7 1289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.815 FUNCTIONAL_SNP rs9543543 chr13 74731845 Intergenic 7 1453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9530283 chr13 74715428 Intergenic 7 14964 CEU:1.0;0.828, CHB:0.86;0.74, JPT:0.856;0.643 FUNCTIONAL_SNP rs9530284 chr13 74718939 Intergenic 7 11453 CEU:1.0;0.906, CHB:1.0;0.863, JPT:0.856;0.642 FUNCTIONAL_SNP rs7322073 chr13 74731479 Intergenic 7 1087 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12429889 chr13 74742322 Intergenic 5a ASSOCIATION 21658281 Sudden cardiac arrest 19.3010299957 KLF12 - RPL21P108 FUNCTIONAL_SNP rs12428827 chr13 74742390 Intergenic 4 68 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.85, YRI:1.0;0.914 FUNCTIONAL_SNP rs12867877 chr13 74742650 Intergenic 4 328 CEU:1.0;0.899, CHB:1.0;0.897, JPT:1.0;0.915 FUNCTIONAL_SNP rs12869360 chr13 74767772 Intergenic 4 25450 CEU:1.0;0.801, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs12859150 chr13 74741446 Intergenic 5b 876 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs7982535 chr13 74752035 Intergenic 5b 9713 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs6562808 chr13 74745973 Intergenic 5b 3651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12877629 chr13 74744371 Intergenic 6 2049 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11620053 chr13 74751444 Intergenic 6 9122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs12428808 chr13 74742294 Intergenic 7 28 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.914 FUNCTIONAL_SNP rs12859161 chr13 74757099 Intergenic 7 14777 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;0.914 FUNCTIONAL_SNP rs12858446 chr13 74757042 Intergenic 7 14720 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.918, YRI:1.0;0.912 FUNCTIONAL_SNP rs12874349 chr13 74747074 Intergenic 7 4752 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 LEAD_SNP rs548097 chr13 75776268 Intergenic 5a ASSOCIATION 20445134 Heart failure 6.22184874962 RPL21P108 - TBC1D4 FUNCTIONAL_SNP rs10492448 chr13 75648513 Intergenic 5b 127755 CEU:1.0;1.0 FUNCTIONAL_SNP rs572954 chr13 75775869 Intergenic 6 399 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs546306 chr13 75776454 Intergenic 7 186 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.78 FUNCTIONAL_SNP rs492273 chr13 75775717 Intergenic 7 551 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 LEAD_SNP rs9574199 chr13 78808914 Intron 6 ASSOCIATION 21116278 Total ventricular volume 5.15490195999 EDNRB - RPL31P54 LEAD_SNP rs17070284 chr13 79359424 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 5.52287874528 RPL21P111 - HSPD1P8 LEAD_SNP rs11838918 chr13 79410574 Intergenic 6 ASSOCIATION 20585324 Conduct disorder (case status) 5.52287874528 RPL21P111 - HSPD1P8 ASSOCIATION 20585324 Conduct disorder (symptom count) 8.0 RPL21P111 - HSPD1P8 LEAD_SNP rs1218282 chr13 79455832 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 5.30102999566 HSPD1P8 - CCT5P2 FUNCTIONAL_SNP rs7324930 chr13 79468930 Intergenic 7 13098 CEU:1.0;1.0 LEAD_SNP rs2039553 chr13 80299722 Intergenic 7 ASSOCIATION 20686608 Pancreatic cancer 5.15490195999 NDFIP2 - SPRY2 LEAD_SNP rs9574565 chr13 80668874 Intergenic 6 ASSOCIATION 20023658 Nonsyndromic cleft lip with or without cleft palate 6.52287874528 NDFIP2 - SPRY2 FUNCTIONAL_SNP rs9574562 chr13 80655517 Intergenic 6 13357 CEU:0.898;0.807, CHB:1.0;0.857, JPT:0.874;0.764 LEAD_SNP rs1359790 chr13 80717156 Intergenic 6 ASSOCIATION 20862305 Type 2 diabetes 8.22184874962 NDFIP2 - SPRY2 FUNCTIONAL_SNP rs1215468 chr13 80707429 Intergenic 4 9727 CEU:1.0;1.0, CHB:1.0;0.889, JPT:1.0;0.937 FUNCTIONAL_SNP rs1327315 chr13 80708732 Intergenic 5b 8424 CEU:1.0;1.0, CHB:1.0;0.889, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1215451 chr13 80715893 Intergenic 5b 1263 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11616380 chr13 80705315 Intergenic 5b 11841 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.937 FUNCTIONAL_SNP rs9565546 chr13 80710954 Intergenic 7 6202 CEU:1.0;1.0, CHB:1.0;0.609 FUNCTIONAL_SNP rs1327316 chr13 80709063 Intergenic 7 8093 CEU:1.0;1.0, CHB:1.0;0.609 FUNCTIONAL_SNP rs1215466 chr13 80708940 Intergenic 7 8216 CEU:1.0;1.0, CHB:1.0;0.609, JPT:1.0;0.525 FUNCTIONAL_SNP rs1215470 chr13 80706455 Intergenic 7 10701 CEU:1.0;1.0, CHB:1.0;0.609 LEAD_SNP rs534870 chr13 80959207 Intergenic 7 ASSOCIATION 21706003 Adiposity 7.15490195999 SPRY2 - ARF4P4 FUNCTIONAL_SNP rs1999494 chr13 81000505 Intergenic 6 41298 CEU:1.0;0.863, CHB:0.812;0.542, JPT:0.896;0.803 FUNCTIONAL_SNP rs556140 chr13 80968959 Intergenic 6 9752 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.731 FUNCTIONAL_SNP rs7985554 chr13 81009171 Intergenic 7 49964 CEU:1.0;0.863, CHB:0.821;0.581, JPT:0.896;0.803 FUNCTIONAL_SNP rs9318686 chr13 81012613 Intergenic 7 53406 CEU:1.0;0.863, CHB:0.821;0.581, JPT:0.894;0.799 FUNCTIONAL_SNP rs4885723 chr13 81009944 Intergenic 7 50737 CEU:1.0;0.863, CHB:0.812;0.542, JPT:0.896;0.803 FUNCTIONAL_SNP rs7998796 chr13 81020036 Intergenic 7 60829 CEU:1.0;0.863, CHB:0.821;0.581, JPT:0.896;0.803 FUNCTIONAL_SNP rs693839 chr13 80958288 Intergenic 7 919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.591 FUNCTIONAL_SNP rs4885722 chr13 81002020 Intergenic 7 42813 CEU:1.0;0.863, CHB:0.816;0.572, JPT:0.896;0.803 LEAD_SNP rs9546711 chr13 85054266 Intergenic 7 ASSOCIATION 21347282 Coronary heart disease 5.69897000434 VENTXP2 - SLITRK6 FUNCTIONAL_SNP rs9531594 chr13 85044995 Intergenic 5b 9271 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.822, YRI:1.0;1.0 LEAD_SNP rs4773460 chr13 87242857 Intergenic 7 ASSOCIATION 19668339 Hippocampal atrophy 5.69897000434 DDX6P2 - LIN28AP2 FUNCTIONAL_SNP rs7324144 chr13 87240717 Intergenic 6 2140 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.854, YRI:1.0;0.962 FUNCTIONAL_SNP rs4773449 chr13 87237231 Intergenic 7 5626 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.854, YRI:1.0;1.0 FUNCTIONAL_SNP rs7996543 chr13 87237562 Intergenic 7 5295 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;0.854, YRI:1.0;1.0 LEAD_SNP rs7323893 chr13 88704706 Intergenic 5a ASSOCIATION 21347282 Coronary heart disease 7.0 TET1P1 - RPL29P29 LEAD_SNP rs2882281 chr13 90622455 Intergenic 5b ASSOCIATION 20834067 Longevity 6.0 SP3P - KRT18P27 FUNCTIONAL_SNP rs7997735 chr13 90625359 Intergenic 5a 2904 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs2185650 chr13 90618955 Intergenic 5b 3500 CEU:1.0;1.0, CHB:1.0;0.903, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1015489 chr13 90629060 Intergenic 5b 6605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.833 FUNCTIONAL_SNP rs9588814 chr13 90623011 Intergenic 5b 556 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1547802 chr13 90627524 Intergenic 6 5069 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs9588810 chr13 90615430 Intergenic 6 7025 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.927 FUNCTIONAL_SNP rs2027467 chr13 90618584 Intergenic 6 3871 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs9588815 chr13 90623215 Intergenic 6 760 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9301641 chr13 90628417 Intergenic 7 5962 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs9583757 chr13 90624758 Intergenic 7 2303 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs2027466 chr13 90625758 Intergenic 7 3303 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.862 FUNCTIONAL_SNP rs9588820 chr13 90628015 Intergenic 7 5560 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.814 FUNCTIONAL_SNP rs7324134 chr13 90620379 Intergenic 7 2076 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9588819 chr13 90627791 Intergenic 7 5336 CEU:1.0;1.0, CHB:1.0;0.842, JPT:1.0;1.0, YRI:1.0;0.833 LEAD_SNP rs8002779 chr13 92015977 Intergenic 6 ASSOCIATION 20189936 Height 5.52287874528 MIR17HG - GPC5 FUNCTIONAL_SNP rs4142965 chr13 92013413 Intergenic 7 2564 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs16946160 chr13 92203813 Intron 6 ASSOCIATION 21441931 Nephrotic syndrome (acquired) 6.52287874528 GPC5 LEAD_SNP rs2352028 chr13 92445229 Intron 7 ASSOCIATION 20304703 Lung cancer 5.22184874962 GPC5 FUNCTIONAL_SNP rs2989995 chr13 92449864 Intron 4 4635 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2938874 chr13 92450407 Intron 5a 5178 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs535973 chr13 92444709 Intron 5b 520 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs528366 chr13 92444778 Intron 5b 451 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs400118 chr13 92439511 Intron 6 5718 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.812 FUNCTIONAL_SNP rs2938869 chr13 92452343 Intron 6 7114 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs173141 chr13 92434736 Intron 7 10493 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs193208 chr13 92437430 Intron 7 7799 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs464160 chr13 92444312 Intron 7 917 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2352029 chr13 92445255 Intron 7 26 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2990004 chr13 92446505 Intron 7 1276 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2990007 chr13 92445272 Intron 7 43 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs1847717 chr13 92448616 Intron 7 3387 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2938868 chr13 92453051 Intron 7 7822 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1413191 chr13 93213476 Intron 6 ASSOCIATION 20205591 HIV-1 control 5.30102999566 GPC5 FUNCTIONAL_SNP rs449674 chr13 93178034 Intron 5a 35442 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.946;0.849 FUNCTIONAL_SNP rs1855367 chr13 93223248 Intron 6 9772 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs7998089 chr13 93212112 Intron 6 1364 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs4542527 chr13 93197128 Intron 6 16348 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.943;0.888 FUNCTIONAL_SNP rs1360671 chr13 93164133 Intron 7 49343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.946;0.849 LEAD_SNP rs17267292 chr13 93323146 Intron 5a ASSOCIATION 19043545 Serum metabolites 7.0 GPC5 FUNCTIONAL_SNP rs1933184 chr13 93327734 Intron 5a 4588 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17188557 chr13 93323269 Intron 5a 123 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1933183 chr13 93327850 Intron 5a 4704 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1933185 chr13 93327463 Intron 7 4317 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.822, YRI:1.0;1.0 FUNCTIONAL_SNP rs12583849 chr13 93322312 Intron 7 834 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12583136 chr13 93322185 Intron 7 961 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9523762 chr13 93331886 Intron 6 ASSOCIATION 19010793 Multiple sclerosis 6.0 GPC5 LEAD_SNP rs9561329 chr13 94011169 Intron 7 ASSOCIATION 20634892 Neuroticism 7.0 GPC6 FUNCTIONAL_SNP rs9561346 chr13 94075455 Intron 5a 64286 CEU:1.0;0.889 FUNCTIONAL_SNP rs8002366 chr13 93999944 Intron 5a 11225 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4773745 chr13 94065091 Intron 5b 53922 CEU:1.0;1.0 FUNCTIONAL_SNP rs9561340 chr13 94061809 Intron 5b 50640 CEU:1.0;1.0 FUNCTIONAL_SNP rs9556289 chr13 94061799 Intron 5b 50630 CEU:1.0;1.0 FUNCTIONAL_SNP rs1359198 chr13 94061490 Intron 5b 50321 CEU:1.0;1.0 FUNCTIONAL_SNP rs9524070 chr13 94100104 Intron 5b 88935 CEU:1.0;0.907 FUNCTIONAL_SNP rs17300206 chr13 94042157 Intron 5b 30988 CEU:1.0;1.0 FUNCTIONAL_SNP rs9516225 chr13 94015230 Intron 6 4061 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.601 FUNCTIONAL_SNP rs9524038 chr13 94038182 Intron 6 27013 CEU:1.0;1.0 FUNCTIONAL_SNP rs7997302 chr13 94035652 Intron 6 24483 CEU:1.0;1.0 FUNCTIONAL_SNP rs2025947 chr13 93975531 Intron 6 35638 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;1.0 FUNCTIONAL_SNP rs17234460 chr13 94047270 Intron 7 36101 CEU:1.0;1.0 FUNCTIONAL_SNP rs4771875 chr13 94068036 Intron 7 56867 CEU:1.0;1.0 FUNCTIONAL_SNP rs9561315 chr13 93989725 Intron 7 21444 CEU:1.0;1.0, CHB:1.0;0.796, JPT:1.0;1.0 FUNCTIONAL_SNP rs9561322 chr13 93995542 Intron 7 15627 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs9561326 chr13 94007107 Intron 7 4062 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs9561334 chr13 94034052 Intron 7 22883 CEU:1.0;0.865, CHB:0.906;0.752, JPT:1.0;0.876 FUNCTIONAL_SNP rs9561336 chr13 94034140 Intron 7 22971 CEU:1.0;1.0 FUNCTIONAL_SNP rs7329539 chr13 94052090 Intron 7 40921 CEU:1.0;1.0 FUNCTIONAL_SNP rs876808 chr13 94044062 Intron 7 32893 CEU:1.0;1.0 FUNCTIONAL_SNP rs1980727 chr13 94077561 Intron 7 66392 CEU:1.0;0.907 FUNCTIONAL_SNP rs9524039 chr13 94038262 Intron 7 27093 CEU:1.0;1.0 FUNCTIONAL_SNP rs2762082 chr13 94088707 Intron 7 77538 CEU:1.0;0.907 FUNCTIONAL_SNP rs1445266 chr13 94085849 Intron 7 74680 CEU:1.0;1.0 FUNCTIONAL_SNP rs4773747 chr13 94075872 Intron 7 64703 CEU:1.0;1.0 FUNCTIONAL_SNP rs9301877 chr13 94021855 Intron 7 10686 CEU:1.0;1.0 FUNCTIONAL_SNP rs3814277 chr13 93979343 Intron 7 31826 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7338402 chr13 94087982 Intron 7 76813 CEU:1.0;0.907 FUNCTIONAL_SNP rs7994277 chr13 93981755 Intron 7 29414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2038727 chr13 94074425 Intron 7 63256 CEU:1.0;1.0 FUNCTIONAL_SNP rs973302 chr13 94101736 Intron 7 90567 CEU:1.0;0.907 LEAD_SNP rs7995215 chr13 94408506 Intron 7 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 8.0 GPC6 LEAD_SNP rs9302001 chr13 95463392 Intergenic 7 ASSOCIATION 19165232 Panic disorder 6.52287874528 RPL21P112 - ABCC4 FUNCTIONAL_SNP rs6492751 chr13 95460383 Intergenic 6 3009 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1359409 chr13 95457725 Intergenic 7 5667 CEU:1.0;0.955, CHB:1.0;0.941, JPT:1.0;0.95, YRI:1.0;1.0 LEAD_SNP rs4148546 chr13 95680285 Intron 7 ASSOCIATION 20834067 Longevity 6.0 ABCC4 LEAD_SNP rs1926657 chr13 95874956 Intron 4 ASSOCIATION 17903305 Breast cancer 5.69897000434 ABCC4 FUNCTIONAL_SNP rs4505186 chr13 95878852 Intron 2b 3896 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4636781 chr13 95878842 Intron 2b 3886 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4773854 chr13 95879410 Intron 3a 4454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4773855 chr13 95879441 Intron 4 4485 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs9524845 chr13 95878641 Intron 4 3685 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4773857 chr13 95884048 Intron 5a 9092 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.95, YRI:1.0;0.929 FUNCTIONAL_SNP rs7329432 chr13 95881372 Intron 5b 6416 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.929 FUNCTIONAL_SNP rs9516545 chr13 95876137 Intron 6 1181 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs899496 chr13 95862896 Intron 6 12060 CEU:1.0;0.922, CHB:1.0;0.954, JPT:1.0;0.948, YRI:1.0;0.861 FUNCTIONAL_SNP rs4148469 chr13 95863358 Intron 6 11598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.832 FUNCTIONAL_SNP rs899497 chr13 95863143 Intron 7 11813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.832 FUNCTIONAL_SNP rs3782965 chr13 95863505 Intron 7 11451 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.832 FUNCTIONAL_SNP rs4612933 chr13 95875614 Intron 7 658 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs7325019 chr13 95875518 Intron 7 562 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4303338 chr13 95876101 Intron 7 1145 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.964 LEAD_SNP rs2038823 chr13 96951433 Intron 7 ASSOCIATION 21310492 Diabetic retinopathy 10.3010299957 HS6ST3 LEAD_SNP rs9556711 chr13 98016416 Intron 5b ASSOCIATION 21529783 Alcoholism (alcohol dependence factor score) 6.09691001301 MBNL2 ASSOCIATION 21529783 Alcoholism (alcohol use disorder factor score) 5.69897000434 MBNL2 FUNCTIONAL_SNP rs16954019 chr13 97970886 Intron 5b 45530 CEU:1.0;0.848, CHB:0.932;0.868, JPT:0.882;0.697 FUNCTIONAL_SNP rs11838553 chr13 98013862 Intron 5b 2554 CEU:1.0;1.0, CHB:0.932;0.868, JPT:1.0;1.0 FUNCTIONAL_SNP rs7989284 chr13 98003973 Intron 7 12443 CEU:1.0;0.848 FUNCTIONAL_SNP rs11069259 chr13 98008467 Intron 7 7949 CEU:1.0;1.0, CHB:0.932;0.868, JPT:1.0;0.693, YRI:0.791;0.577 FUNCTIONAL_SNP rs7333720 chr13 98005152 Intron 7 11264 CEU:1.0;1.0, CHB:0.932;0.868, JPT:1.0;1.0 FUNCTIONAL_SNP rs1556086 chr13 97978485 Intron 7 37931 CEU:1.0;0.848, CHB:0.932;0.868, JPT:0.881;0.696 LEAD_SNP rs4318070 chr13 98960762 Intron 5b ASSOCIATION 21116278 Total ventricular volume 5.15490195999 FARP1 FUNCTIONAL_SNP rs17566878 chr13 98960458 Intron 2b 304 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs688872 chr13 98966317 Intron 5b ASSOCIATION 20171287 Brain structure 6.0 FARP1 FUNCTIONAL_SNP rs678950 chr13 98965047 Intron 5b 1270 CEU:0.945;0.848, CHB:1.0;1.0, JPT:1.0;0.892 LEAD_SNP rs9584805 chr13 98994030 Intron 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 5.69897000434 FARP1 FUNCTIONAL_SNP rs9582213 chr13 98993047 Intron 7 983 CEU:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.962 LEAD_SNP rs9517320 chr13 99126303 Intron 2b ASSOCIATION 20834067 Longevity 6.0 STK24 FUNCTIONAL_SNP rs1886089 chr13 99124356 Intron 2c 1947 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2274056 chr13 99134839 Intron 4 8536 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9584856 chr13 99126551 Intron 5b 248 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12864890 chr13 99126457 Intron 5b 154 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.926 LEAD_SNP rs7335046 chr13 100041738 Intergenic 5b ASSOCIATION 21700618 Basal cell carcinoma (cutaneous) 7.52287874528 FKSG29 - TM9SF2 FUNCTIONAL_SNP rs3825427 chr13 99848971 Exon,non-coding 4 192767 CEU:1.0;0.89, CHB:1.0;0.846, JPT:1.0;0.942 FUNCTIONAL_SNP rs727263 chr13 100004108 Intron 2b 37630 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs1998475 chr13 99964375 Intron 3a 77363 CEU:1.0;0.907, CHB:0.934;0.773, JPT:1.0;1.0 FUNCTIONAL_SNP rs4238216 chr13 100064970 Intergenic 4 23232 CEU:1.0;1.0 FUNCTIONAL_SNP rs7318947 chr13 100020212 Intron 4 21526 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs9517668 chr13 99923840 Intron 4 117898 CEU:1.0;0.89, CHB:1.0;0.846, JPT:1.0;0.943, YRI:1.0;0.714 FUNCTIONAL_SNP rs7994398 chr13 99918150 Intron 4 123588 CEU:1.0;0.89, CHB:1.0;0.846, JPT:1.0;0.943, YRI:0.769;0.544 FUNCTIONAL_SNP rs9513579 chr13 99854602 Intron 4 187136 CEU:1.0;0.907 FUNCTIONAL_SNP rs9554581 chr13 99962892 Intron 4 78846 CEU:1.0;0.89, CHB:1.0;0.896, JPT:1.0;0.942 FUNCTIONAL_SNP rs7999077 chr13 100058121 Intergenic 5a 16383 CEU:1.0;0.89, CHB:0.933;0.694, JPT:0.925;0.667 FUNCTIONAL_SNP rs912129 chr13 100033652 Intron 5b 8086 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942, YRI:1.0;1.0 FUNCTIONAL_SNP rs9517701 chr13 100029540 Intron 5b 12198 CEU:1.0;0.89, CHB:1.0;1.0, JPT:0.94;0.884 FUNCTIONAL_SNP rs7322759 chr13 99909678 Intron 5b 132060 CEU:1.0;0.907, CHB:0.941;0.795, JPT:1.0;0.948 FUNCTIONAL_SNP rs9517676 chr13 99949378 Intron 5b 92360 CEU:1.0;0.907, CHB:0.941;0.795, JPT:1.0;1.0 FUNCTIONAL_SNP rs9517678 chr13 99961059 Intron 5b 80679 CEU:1.0;0.907, CHB:0.938;0.829, JPT:1.0;1.0 FUNCTIONAL_SNP rs9554586 chr13 100040239 Intergenic 5b 1499 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.939 FUNCTIONAL_SNP rs17575643 chr13 99984675 Intron 5b 57063 CEU:1.0;0.89 FUNCTIONAL_SNP rs752820 chr13 99870112 Intron 5b 171626 CEU:1.0;0.906, CHB:1.0;0.844, JPT:1.0;1.0 FUNCTIONAL_SNP rs7332161 chr13 100023469 Intron 5b 18269 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs2093642 chr13 100031630 Intron 5b 10108 CEU:1.0;0.907, CHB:1.0;0.937, JPT:1.0;0.934 FUNCTIONAL_SNP rs9557209 chr13 100041211 Intergenic 5b 527 CEU:1.0;0.907, CHB:1.0;1.0, JPT:0.946;0.895 FUNCTIONAL_SNP rs4772190 chr13 100034116 Intron 5b 7622 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.942, YRI:1.0;0.523 FUNCTIONAL_SNP rs9300536 chr13 99925464 Intron 5b 116274 CEU:1.0;0.863, YRI:1.0;0.858 FUNCTIONAL_SNP rs9517667 chr13 99915135 Intron 6 126603 CEU:1.0;0.907, CHB:0.938;0.787, JPT:1.0;0.895 FUNCTIONAL_SNP rs3825426 chr13 99979072 Intron 6 62666 CEU:1.0;0.907, CHB:1.0;0.947, JPT:1.0;0.842 FUNCTIONAL_SNP rs7325747 chr13 100029932 Intron 6 11806 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs9517670 chr13 99933643 Intron 6 108095 CEU:1.0;0.907 FUNCTIONAL_SNP rs2390239 chr13 99993720 Intron 6 48018 CEU:1.0;0.89, CHB:1.0;0.948, JPT:1.0;0.942 FUNCTIONAL_SNP rs7332358 chr13 100023529 Intron 7 18209 CEU:1.0;0.89 FUNCTIONAL_SNP rs1927726 chr13 99912883 Intron 7 128855 CEU:1.0;0.89, CHB:1.0;0.846, JPT:1.0;0.943 FUNCTIONAL_SNP rs913464 chr13 99989989 Intron 7 51749 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs9557199 chr13 99969506 Intron 7 72232 CEU:1.0;0.907, CHB:1.0;0.949, JPT:0.944;0.891 FUNCTIONAL_SNP rs4772189 chr13 99994573 Intron 7 47165 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs4636771 chr13 100021518 Intron 7 20220 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs9517693 chr13 99990049 Intron 7 51689 CEU:1.0;0.865 FUNCTIONAL_SNP rs9517681 chr13 99966291 Intron 7 75447 CEU:1.0;0.907, CHB:1.0;0.897, JPT:1.0;1.0 LEAD_SNP rs7992643 chr13 100555038 Intron 5b ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.30102999566 CLYBL - ZIC5 FUNCTIONAL_SNP rs8002438 chr13 100553260 Intron 5b 1778 CEU:1.0;0.844, CHB:1.0;0.869, JPT:1.0;0.905, YRI:1.0;0.809 LEAD_SNP rs2044117 chr13 101708310 Intron 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.30102999566 NALCN FUNCTIONAL_SNP rs8922 chr13 101706193 Exon,non-coding 5b 2117 CEU:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs7336126 chr13 101714054 Intron 7 5744 CEU:1.0;0.94, YRI:1.0;0.942 LEAD_SNP rs912969 chr13 103867104 Intergenic 7 ASSOCIATION 19247474 Smoking behavior 5.09691001301 SLC10A2 - RPL7P45 FUNCTIONAL_SNP rs927798 chr13 103868004 Intergenic 7 900 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1529276 chr13 103928007 Intergenic 6 ASSOCIATION 17903305 Prostate cancer 5.69897000434 SLC10A2 - RPL7P45 LEAD_SNP rs4771450 chr13 103969491 Intergenic 7 ASSOCIATION 18759275 Serum uric acid 5.69897000434 SLC10A2 - RPL7P45 FUNCTIONAL_SNP rs3916929 chr13 103969608 Intergenic 5b 117 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs2026181 chr13 103969099 Intergenic 7 392 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 LEAD_SNP rs4996815 chr13 106651661 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 7.0 DAOA - RPL35P7 LEAD_SNP rs1927745 chr13 107780316 Intergenic 5b ASSOCIATION 20800221 Depression--quantitative trait 5.30102999566 ARGLU1 - FAM155A FUNCTIONAL_SNP rs713548 chr13 107772399 Intergenic 5a 7917 CEU:0.947;0.896, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.91;0.828 FUNCTIONAL_SNP rs9301191 chr13 107769104 Intergenic 6 11212 CEU:0.942;0.887, CHB:1.0;0.947, JPT:1.0;1.0, YRI:0.891;0.625 FUNCTIONAL_SNP rs9634463 chr13 107771235 Intergenic 7 9081 CEU:0.946;0.896, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.905;0.819 FUNCTIONAL_SNP rs7329003 chr13 107773548 Intergenic 7 6768 CEU:0.947;0.896, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.91;0.828 LEAD_SNP rs957788 chr13 108257220 Intron 5b ASSOCIATION 21079607 Anorexia nervosa 5.09691001301 FAM155A FUNCTIONAL_SNP rs9583180 chr13 108233596 Intron 2b 23624 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.949;0.56 FUNCTIONAL_SNP rs16970756 chr13 108237124 Intron 5b 20096 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs11842161 chr13 108246475 Intron 7 10745 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 LEAD_SNP rs10492664 chr13 108816225 Intergenic 5b ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 6.0 FAM155A - LIG4 LEAD_SNP rs3742207 chr13 110818598 Coding 7 ASSOCIATION 20031579 Arterial stiffness 7.30102999566 COL4A1 FUNCTIONAL_SNP rs694225 chr13 110819143 Intron 2b 545 CEU:1.0;0.954, CHB:1.0;0.538 FUNCTIONAL_SNP rs589985 chr13 110819586 Intron 5b 988 CEU:1.0;1.0, CHB:1.0;0.662, JPT:1.0;0.706 FUNCTIONAL_SNP rs1213026 chr13 110819362 Intron 6 764 CEU:1.0;1.0, CHB:1.0;0.538 LEAD_SNP rs4773144 chr13 110960712 Intron 2b ASSOCIATION 21378990 Coronary heart disease 8.39794000867 COL4A1;COL4A2 FUNCTIONAL_SNP rs3809346 chr13 110960943 Intron 4 231 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.936;0.825, YRI:1.0;0.953 LEAD_SNP rs7319311 chr13 111030578 Intron 5a ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.39794000867 COL4A2 FUNCTIONAL_SNP rs7320755 chr13 111031092 Intron 4 514 CEU:1.0;1.0, CHB:1.0;0.898, JPT:1.0;0.951, YRI:1.0;0.861 FUNCTIONAL_SNP rs9521729 chr13 111029970 Intron 5b 608 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs767210 chr13 111470038 Intergenic 5b ASSOCIATION 19734545 Cognitive performance 6.52287874528 LOC100129390 LEAD_SNP rs4773330 chr13 111818832 Intron 5a ASSOCIATION 19414484 Serum bilirubin levels 5.09691001301 ARHGEF7 LEAD_SNP rs9555810 chr13 112181437 Intergenic 7 ASSOCIATION 21102462 Menarche (age at onset) 7.22184874962 C13orf16 - SOX1 FUNCTIONAL_SNP rs9560114 chr13 112187882 Intergenic 5a 6445 CEU:1.0;0.951, CHB:1.0;0.933, JPT:0.895;0.801 FUNCTIONAL_SNP rs9560111 chr13 112181289 Intergenic 5b 148 CEU:1.0;0.945, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9560105 chr13 112175363 Intergenic 5b 6074 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.787 FUNCTIONAL_SNP rs9560106 chr13 112179605 Intergenic 5b 1832 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.787 FUNCTIONAL_SNP rs9560107 chr13 112180146 Intergenic 5b 1291 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.799 FUNCTIONAL_SNP rs953260 chr13 112173685 Intergenic 5b 7752 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs9560113 chr13 112183348 Intergenic 5b 1911 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1177401 chr13 112173067 Intergenic 5b 8370 CEU:0.949;0.858, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1163862 chr13 112174319 Intergenic 5b 7118 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9555804 chr13 112179751 Intergenic 5b 1686 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.799 FUNCTIONAL_SNP rs9555805 chr13 112179765 Intergenic 5b 1672 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.799 FUNCTIONAL_SNP rs9555813 chr13 112187218 Intergenic 5b 5781 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7991106 chr13 112186638 Intergenic 6 5201 CEU:1.0;0.952, JPT:1.0;0.513 FUNCTIONAL_SNP rs4773387 chr13 112180955 Intergenic 7 482 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9555809 chr13 112181401 Intergenic 7 36 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7333181 chr13 112221297 Intergenic 5b ASSOCIATION 19448619 Menopause (age at onset) 7.52287874528 C13orf16 - SOX1 LEAD_SNP rs7998202 chr13 113331868 Intron 6 ASSOCIATION 20858683 Glycated hemoglobin levels 8.30102999566 C13orf35 FUNCTIONAL_SNP rs282606 chr13 113339761 Intergenic 2b 7893 CEU:1.0;1.0, CHB:1.0;0.846 FUNCTIONAL_SNP rs12868291 chr13 113329598 Intron 6 2270 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs561241 chr13 113760034 Intergenic 4 ASSOCIATION 17903294 Factor VII 15.3010299957 F7 LEAD_SNP rs12147450 chr14 20957433 Intergenic 4 ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 6.22184874962 GAFA1 - RNASE10 LEAD_SNP rs17197037 chr14 21725654 Intron 5b ASSOCIATION 21738484 Bipolar disorder 5.69897000434 HNRNPC LEAD_SNP rs1154155 chr14 23002684 Intron 7 ASSOCIATION 20711174 Narcolepsy 6.30102999566 TRA@ ASSOCIATION 19412176 Narcolepsy 21.5228787453 TRA@ FUNCTIONAL_SNP rs1483979 chr14 22988972 Exon,non-coding 4 13712 CEU:1.0;0.927, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs1154153 chr14 23001547 Intron 2b 1137 CEU:1.0;0.927, CHB:1.0;0.561, JPT:1.0;0.559 FUNCTIONAL_SNP rs3764159 chr14 22984586 Intron 2b 18098 CEU:1.0;0.927, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs943888 chr14 23015874 Intron 4 13190 CEU:1.0;0.847, CHB:0.948;0.818, JPT:0.946;0.775, YRI:1.0;1.0 FUNCTIONAL_SNP rs1263642 chr14 23014148 Intron 4 11464 CEU:1.0;0.837, CHB:1.0;0.754, JPT:0.947;0.777 FUNCTIONAL_SNP rs1263645 chr14 23017321 Intron 4 14637 CEU:1.0;0.862, CHB:0.8;0.61, JPT:0.894;0.727, YRI:1.0;1.0 FUNCTIONAL_SNP rs3764160 chr14 22985358 Intron 5b 17326 CEU:1.0;0.927, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs12587781 chr14 22999617 Intron 7 3067 CEU:1.0;0.927, CHB:1.0;0.561, JPT:1.0;0.559 FUNCTIONAL_SNP rs1154158 chr14 23006908 Intron 7 4224 CEU:1.0;0.804, CHB:0.939;0.659, JPT:0.94;0.693 FUNCTIONAL_SNP rs1263635 chr14 23006406 Intron 7 3722 CEU:1.0;0.805, CHB:1.0;0.538 LEAD_SNP rs2239633 chr14 23589057 Intergenic 4 ASSOCIATION 19684604 Acute lymphoblastic leukemia (childhood) 6.52287874528 CEBPE FUNCTIONAL_SNP rs12434881 chr14 23588642 Exon,non-coding 2b 415 CEU:1.0;0.888, CHB:1.0;0.676, JPT:1.0;0.748, YRI:1.0;1.0 FUNCTIONAL_SNP rs2239630 chr14 23589349 Intergenic 2b 292 CEU:1.0;0.855 FUNCTIONAL_SNP rs2239634 chr14 23588863 Intergenic 4 194 CEU:1.0;0.92, CHB:1.0;0.638, JPT:1.0;0.574 FUNCTIONAL_SNP rs2239632 chr14 23589127 Intergenic 4 70 CEU:1.0;0.889, CHB:1.0;0.638, JPT:1.0;0.559 LEAD_SNP rs365990 chr14 23861811 Coding 5b ASSOCIATION 20062063 Electrocardiographic traits 10.0457574906 MYH6 FUNCTIONAL_SNP rs440466 chr14 23874117 Intron 5b 12306 CEU:1.0;0.914 FUNCTIONAL_SNP rs3729829 chr14 23885887 Intron 5b 24076 CEU:1.0;0.84, CHB:1.0;0.553 FUNCTIONAL_SNP rs12894524 chr14 23888040 Intron 5b 26229 CEU:1.0;0.835, CHB:1.0;0.553 FUNCTIONAL_SNP rs452036 chr14 23865885 Intron 5b 4074 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7159367 chr14 23887645 Intron 5b 25834 CEU:1.0;0.84, CHB:1.0;0.553 FUNCTIONAL_SNP rs7149517 chr14 23882186 Intron 5b 20375 CEU:1.0;0.839, CHB:1.0;0.551 FUNCTIONAL_SNP rs2277475 chr14 23888665 Intron 5b 26854 CEU:1.0;0.84, CHB:1.0;0.526 FUNCTIONAL_SNP rs7143356 chr14 23881083 Intergenic 5b 19272 CEU:1.0;0.837, CHB:1.0;0.92, JPT:1.0;0.833 FUNCTIONAL_SNP rs2284651 chr14 23882144 Intron 5b 20333 CEU:1.0;0.84, CHB:1.0;0.915, JPT:0.901;0.813 FUNCTIONAL_SNP rs7140721 chr14 23885694 Intron 5b 23883 CEU:1.0;0.84, CHB:1.0;0.553 FUNCTIONAL_SNP rs2331979 chr14 23882855 Intron 6 21044 CEU:1.0;0.84, CHB:1.0;0.552 FUNCTIONAL_SNP rs412768 chr14 23866713 Intron 7 4902 CEU:1.0;0.871, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs452036 chr14 23865885 Intron 5b ASSOCIATION 20639392 Resting heart rate 13.3979400087 MYH6 FUNCTIONAL_SNP rs365990 chr14 23861811 Coding 5b 4074 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs440466 chr14 23874117 Intron 5b 8232 CEU:1.0;0.914, CHB:0.871;0.514 FUNCTIONAL_SNP rs3729829 chr14 23885887 Intron 5b 20002 CEU:1.0;0.84, CHB:1.0;0.601 FUNCTIONAL_SNP rs12894524 chr14 23888040 Intron 5b 22155 CEU:1.0;0.835, CHB:1.0;0.601 FUNCTIONAL_SNP rs7159367 chr14 23887645 Intron 5b 21760 CEU:1.0;0.84, CHB:1.0;0.601 FUNCTIONAL_SNP rs7149517 chr14 23882186 Intron 5b 16301 CEU:1.0;0.839, CHB:1.0;0.599 FUNCTIONAL_SNP rs2277475 chr14 23888665 Intron 5b 22780 CEU:1.0;0.84, CHB:1.0;0.575 FUNCTIONAL_SNP rs7143356 chr14 23881083 Intergenic 5b 15198 CEU:1.0;0.837, CHB:1.0;1.0, JPT:1.0;0.833 FUNCTIONAL_SNP rs2284651 chr14 23882144 Intron 5b 16259 CEU:1.0;0.84, CHB:1.0;1.0, JPT:0.901;0.813 FUNCTIONAL_SNP rs7140721 chr14 23885694 Intron 5b 19809 CEU:1.0;0.84, CHB:1.0;0.601 FUNCTIONAL_SNP rs2331979 chr14 23882855 Intron 6 16970 CEU:1.0;0.84, CHB:1.0;0.6 FUNCTIONAL_SNP rs412768 chr14 23866713 Intron 7 828 CEU:1.0;0.871, CHB:1.0;0.92, JPT:1.0;1.0 LEAD_SNP rs223116 chr14 23977010 Intergenic 5a ASSOCIATION 20639392 Resting heart rate 7.52287874528 NGDN - ZFHX2 LEAD_SNP rs2281680 chr14 24033070 Intron 5b ASSOCIATION 21658281 Sudden cardiac arrest 7.22184874962 AP1G2 LEAD_SNP rs12436436 chr14 24381515 Intergenic 5b ASSOCIATION 18711365 Bipolar disorder 5.30102999566 BRD7P1 - C14orf165 FUNCTIONAL_SNP rs10139204 chr14 24382905 Intergenic 6 1390 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.856 LEAD_SNP rs1950500 chr14 24830850 Intergenic 7 ASSOCIATION 20881960 Height 17.6989700043 RIPK3 - NFATC4 FUNCTIONAL_SNP rs12590407 chr14 24835115 Intron 4 4265 CEU:1.0;0.948, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8192917 chr14 25102160 Coding 7 ASSOCIATION 20410501 Vitiligo 7.52287874528 GZMB FUNCTIONAL_SNP rs10909625 chr14 25101629 Coding 6 531 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs1126639 chr14 25101548 Coding 6 612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs2236338 chr14 25100282 Coding 4 1878 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.881 FUNCTIONAL_SNP rs2273844 chr14 25103414 Coding 7 1254 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.824 FUNCTIONAL_SNP rs2236337 chr14 25100247 Exon,non-coding 2b 1913 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.881 FUNCTIONAL_SNP rs6573910 chr14 25100882 Exon,non-coding 6 1278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs6573911 chr14 25100933 Exon,non-coding 7 1227 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.853 FUNCTIONAL_SNP rs8192921 chr14 25099908 Intergenic 7 2252 CEU:1.0;0.939 LEAD_SNP rs854384 chr14 25271520 Intergenic 6 ASSOCIATION 21116278 MRI atrophy measures 6.0 GZMB - STXBP6 FUNCTIONAL_SNP rs17200519 chr14 25265841 Intergenic 6 5679 CEU:1.0;1.0 FUNCTIONAL_SNP rs854364 chr14 25261422 Intergenic 7 10098 CEU:1.0;1.0 LEAD_SNP rs10147992 chr14 25503799 Intron 7 ASSOCIATION 21738478 White blood cell types 8.0 STXBP6 LEAD_SNP rs1951082 chr14 27260043 Intergenic 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.30102999566 NOVA1 - UNGP2 LEAD_SNP rs17111920 chr14 27406892 Intergenic 6 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.52287874528 UNGP2 - RPS27AP4 FUNCTIONAL_SNP rs978081 chr14 27402372 Intergenic 5b 4520 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17111801 chr14 27310036 Intergenic 5b 96856 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7141064 chr14 27363974 Intergenic 6 42918 CEU:1.0;1.0, JPT:1.0;1.0, YRI:0.823;0.678 FUNCTIONAL_SNP rs995604 chr14 27434115 Intergenic 6 27223 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8006775 chr14 27426569 Intergenic 6 19677 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs1956059 chr14 27367268 Intergenic 6 39624 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs7143231 chr14 27334718 Intergenic 6 72174 CEU:1.0;1.0, JPT:1.0;1.0, YRI:0.823;0.678 FUNCTIONAL_SNP rs1950594 chr14 27412847 Intergenic 7 5955 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10483329 chr14 27437764 Intergenic 7 30872 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2295670 chr14 27341751 Intergenic 7 65141 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17111889 chr14 27367970 Intergenic 7 38922 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs6650494 chr14 27301749 Intergenic 7 105143 CEU:1.0;1.0, JPT:1.0;0.741, YRI:0.787;0.512 LEAD_SNP rs2877832 chr14 27800177 Intergenic 6 ASSOCIATION 17903298 Diabetes related insulin traits 5.52287874528 RPS27AP4 - BNIP3P ASSOCIATION 17903298 Diabetes related insulin traits 5.69897000434 RPS27AP4 - BNIP3P LEAD_SNP rs7493138 chr14 29021928 Intergenic 5b ASSOCIATION 20834067 Longevity 6.0 RPL26P3 - BTF3P2 FUNCTIONAL_SNP rs11846443 chr14 29021881 Intergenic 5b 47 CEU:1.0;0.96, CHB:1.0;0.888, JPT:1.0;0.823, YRI:1.0;0.887 LEAD_SNP rs2038256 chr14 29249349 Intron 5b ASSOCIATION 20802204 Multiple sclerosis--Brain Glutamate Levels 5.69897000434 C14orf23 LEAD_SNP rs11847697 chr14 30515112 Intergenic 7 ASSOCIATION 20935630 Body mass index 10.2218487496 PRKD1 - RPS6P24 LEAD_SNP rs7142881 chr14 32093548 Intron 7 ASSOCIATION 18521091 Response to iloperidone treatment (QT prolongation) 5.69897000434 NUBPL FUNCTIONAL_SNP rs7144102 chr14 32088227 Intron 3a 5321 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1897141 chr14 32240738 Intron 5b 147190 CEU:1.0;0.924, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs4981866 chr14 32091501 Intron 7 2047 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8022828 chr14 32059091 Intron 7 34457 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.815 FUNCTIONAL_SNP rs8009647 chr14 32041012 Intron 7 52536 CEU:1.0;0.924, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2039485 chr14 32353250 Intergenic 7 ASSOCIATION 19010793 Brain lesion load 5.22184874962 NUBPL - C14orf128 LEAD_SNP rs915071 chr14 32433858 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.69897000434 NUBPL - C14orf128 FUNCTIONAL_SNP rs972396 chr14 32435312 Intergenic 4 1454 CEU:1.0;0.962, CHB:1.0;0.779, JPT:1.0;1.0, YRI:1.0;0.703 FUNCTIONAL_SNP rs1952966 chr14 32438484 Intergenic 5b 4626 CEU:1.0;0.962, YRI:1.0;0.668 FUNCTIONAL_SNP rs4981942 chr14 32443346 Intergenic 6 9488 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs915070 chr14 32433781 Intergenic 7 77 CEU:0.961;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2383378 chr14 33282470 Intron 6 ASSOCIATION 21079607 Anorexia nervosa 5.22184874962 AKAP6 LEAD_SNP rs4982029 chr14 33476266 Intron 7 ASSOCIATION 20713499 Schizophrenia, bipolar disorder and depression (combined) 5.39794000867 NPAS3 FUNCTIONAL_SNP rs10150095 chr14 33474831 Intron 6 1435 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.754 FUNCTIONAL_SNP rs1959168 chr14 33470902 Intron 7 5364 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1889762 chr14 33470729 Intron 7 5537 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11844835 chr14 33482256 Intron 7 5990 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.754 FUNCTIONAL_SNP rs7142052 chr14 33475598 Intron 7 668 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.789 FUNCTIONAL_SNP rs7141802 chr14 33475288 Intron 7 978 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.789 FUNCTIONAL_SNP rs11845143 chr14 33472345 Intron 7 3921 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4982031 chr14 33478165 Intron 7 1899 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8015959 chr14 33480922 Intron 7 4656 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8009818 chr14 33458493 Intron 7 17773 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10483422 chr14 33478505 Intron 7 2239 CEU:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs8015959 chr14 33480922 Intron 7 ASSOCIATION 18711365 Bipolar disorder 5.30102999566 NPAS3 LEAD_SNP rs12586317 chr14 35682172 Intron 7 ASSOCIATION 20953189 Psoriasis 7.69897000434 KIAA0391 LEAD_SNP rs8016947 chr14 35832666 Intergenic 4 ASSOCIATION 20953190 Psoriasis 10.6989700043 PSMA6 - RPLP0P3 LEAD_SNP rs1168987 chr14 36397680 Intergenic 6 ASSOCIATION 21659360 Response to antineoplastic agents 5.30102999566 BRMS1L - MBIP FUNCTIONAL_SNP rs1168980 chr14 36400983 Intergenic 5b 3303 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs1475066 chr14 36425287 Intergenic 7 27607 CEU:1.0;0.899, CHB:0.905;0.749, JPT:1.0;0.943, YRI:0.949;0.719 LEAD_SNP rs944289 chr14 36649246 Intergenic 7 ASSOCIATION 19198613 Thyroid cancer 8.69897000434 BRMS1L - MBIP FUNCTIONAL_SNP rs1169151 chr14 36640601 Intergenic 7 8645 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17104630 chr14 37000049 Intergenic 7 ASSOCIATION 18391950 Height 5.09691001301 NKX2-1 - PHKBP2 FUNCTIONAL_SNP rs17104628 chr14 36999938 Intergenic 7 111 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10498345 chr14 39020505 Intergenic 7 ASSOCIATION 18075462 Coronary spasm 6.04575749056 CLEC14A - KRT8P1 LEAD_SNP rs2154294 chr14 42655275 Intergenic 7 ASSOCIATION 21529783 Alcoholism (12-month weekly alcohol consumption) 5.52287874528 OR10V7P - YWHAQP1 FUNCTIONAL_SNP rs7147264 chr14 42608299 Intergenic 7 46976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.766 FUNCTIONAL_SNP rs3985184 chr14 42603429 Intergenic 7 51846 CEU:1.0;0.924 FUNCTIONAL_SNP rs2415708 chr14 42603099 Intergenic 7 52176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.766 FUNCTIONAL_SNP rs7151217 chr14 42626582 Intergenic 7 28693 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.754;0.526 LEAD_SNP rs12883384 chr14 47403684 Intron 7 ASSOCIATION 18762592 Neuroticism 6.15490195999 MDGA2 FUNCTIONAL_SNP rs2416009 chr14 47405018 Intron 6 1334 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs7151262 chr14 47404177 Intron 7 493 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7159841 chr14 47863835 Intron 7 ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 6.69897000434 MDGA2 FUNCTIONAL_SNP rs7149079 chr14 47856016 Intron 5a 7819 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs7142187 chr14 47860509 Intron 5b 3326 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs7146502 chr14 47838482 Intron 6 25353 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.891, YRI:1.0;0.821 FUNCTIONAL_SNP rs8015962 chr14 47848526 Intron 6 15309 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:0.96;0.885 FUNCTIONAL_SNP rs7159880 chr14 47863938 Intron 6 103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs10136895 chr14 47841521 Intron 6 22314 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;0.924 FUNCTIONAL_SNP rs12590461 chr14 47845293 Intron 6 18542 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.924 FUNCTIONAL_SNP rs10141600 chr14 47855111 Intron 6 8724 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs12894830 chr14 47845326 Intron 7 18509 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.945, YRI:1.0;0.924 FUNCTIONAL_SNP rs7147159 chr14 47838592 Intron 7 25243 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.894, YRI:1.0;0.822 FUNCTIONAL_SNP rs10147494 chr14 47839594 Intron 7 24241 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.894, YRI:1.0;0.924 FUNCTIONAL_SNP rs12883727 chr14 47838323 Intron 7 25512 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.87, YRI:1.0;0.845 FUNCTIONAL_SNP rs12586549 chr14 47864639 Intron 7 804 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs12147667 chr14 47859651 Intron 7 4184 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 LEAD_SNP rs7151223 chr14 48564956 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 6.0 RPS15AP3 - RPL18P1 FUNCTIONAL_SNP rs1596731 chr14 48564356 Intergenic 7 600 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1584157 chr14 48570466 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 5.69897000434 RPS15AP3 - RPL18P1 LEAD_SNP rs2352904 chr14 49372801 Intergenic 7 ASSOCIATION 17903297 Cognitive test performance 5.69897000434 RPL18P1 - ATP5G2P2 FUNCTIONAL_SNP rs6572524 chr14 49371003 Intergenic 5b 1798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.948;0.816, YRI:0.956;0.84 FUNCTIONAL_SNP rs7159198 chr14 49370635 Intergenic 6 2166 CEU:1.0;1.0, CHB:1.0;0.951, JPT:0.949;0.82, YRI:0.96;0.885 FUNCTIONAL_SNP rs7161050 chr14 49370877 Intergenic 7 1924 CEU:1.0;1.0, CHB:1.0;0.95, JPT:0.936;0.825, YRI:0.958;0.881 FUNCTIONAL_SNP rs7158874 chr14 49370557 Intergenic 7 2244 CEU:1.0;0.955, CHB:1.0;0.951, JPT:0.945;0.807, YRI:0.915;0.837 LEAD_SNP rs1265879 chr14 50877983 Intron 5b ASSOCIATION 20125193 Cognitive test performance 5.39794000867 CDKL1 - MAP4K5 FUNCTIONAL_SNP rs1265880 chr14 50880437 Intron 7 2454 CEU:1.0;0.879, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17122693 chr14 51084235 Intron 7 ASSOCIATION 20125193 Cognitive test performance 6.52287874528 ATL1 FUNCTIONAL_SNP rs3759588 chr14 51062357 Intron 7 21878 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.814 LEAD_SNP rs8020441 chr14 51170879 Intergenic 6 ASSOCIATION 20125193 Cognitive test performance 6.30102999566 ZNF405P FUNCTIONAL_SNP rs8018822 chr14 51170609 Intergenic 7 270 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.833 LEAD_SNP rs7153703 chr14 51919822 Intergenic 7 ASSOCIATION 21116278 Total ventricular volume 5.52287874528 SETP2 - FRMD6 FUNCTIONAL_SNP rs7146882 chr14 51911218 Intergenic 5b 8604 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7140150 chr14 52010799 Intron 7 ASSOCIATION 20171287 Brain structure 6.30102999566 FRMD6 FUNCTIONAL_SNP rs4901136 chr14 52012988 Intron 4 2189 CEU:1.0;0.888, CHB:1.0;0.87, JPT:1.0;0.866 FUNCTIONAL_SNP rs12879891 chr14 52014236 Intron 4 3437 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.909 LEAD_SNP rs11626056 chr14 52233276 Intergenic 7 ASSOCIATION 19668339 Hippocampal atrophy 6.0 OR7E106P - OR7E159P FUNCTIONAL_SNP rs11157848 chr14 52232705 Intergenic 5b 571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs730532 chr14 52518811 Intron 5b ASSOCIATION 17903307 Pulmonary function traits (other) 5.22184874962 NID2 FUNCTIONAL_SNP rs1390968 chr14 52517629 Intron 7 1182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1380131 chr14 54072858 Intron 7 ASSOCIATION 21529783 Alcoholism (heaviness of drinking) 5.04575749056 DDHD1 - RPS3AP46 LEAD_SNP rs12431733 chr14 54290830 Intron 7 ASSOCIATION 19915575 Parkinson's disease 5.52287874528 RPS3AP46 - BMP4 LEAD_SNP rs4444235 chr14 54410919 Intergenic 5b ASSOCIATION 19011631 Colorectal cancer 9.09691001301 RPS3AP46 - BMP4 LEAD_SNP rs4293296 chr14 54857286 Intergenic 5b ASSOCIATION 21107309 Working memory 5.52287874528 ATP5C1P1 - CDKN3 LEAD_SNP rs398652 chr14 56525569 Intergenic 7 ASSOCIATION 21460395 Telomere length 5.69897000434 C14orf34 - PELI2 LEAD_SNP rs10134944 chr14 58119196 Intergenic 7 ASSOCIATION 17554300 Bipolar disorder 5.15490195999 SLC35F4 - C14orf37 FUNCTIONAL_SNP rs11622846 chr14 58141983 Intergenic 5a 22787 CEU:1.0;1.0, CHB:1.0;0.851, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs7151368 chr14 58133858 Intergenic 5b 14662 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs10141999 chr14 58144363 Intergenic 6 25167 CEU:1.0;0.899, CHB:1.0;0.85, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs10144563 chr14 58150661 Intergenic 6 31465 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;0.936, YRI:1.0;0.896 FUNCTIONAL_SNP rs10142349 chr14 58144931 Intergenic 7 25735 CEU:1.0;1.0, CHB:1.0;0.833, JPT:1.0;1.0, YRI:0.932;0.869 FUNCTIONAL_SNP rs11622672 chr14 58124671 Intergenic 7 5475 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs12897429 chr14 58131957 Intergenic 7 12761 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.844 FUNCTIONAL_SNP rs10139807 chr14 58168567 Intergenic 7 49371 CEU:1.0;0.899, CHB:1.0;0.851, JPT:1.0;0.884, YRI:0.942;0.84 FUNCTIONAL_SNP rs8014886 chr14 58128597 Intergenic 7 9401 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.845 FUNCTIONAL_SNP rs10134063 chr14 58154208 Intergenic 7 35012 CEU:1.0;1.0, CHB:1.0;0.851, JPT:1.0;0.941, YRI:1.0;0.896 FUNCTIONAL_SNP rs12891185 chr14 58121448 Intergenic 7 2252 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs7143864 chr14 58123574 Intergenic 7 4378 CEU:1.0;0.828, CHB:1.0;0.927, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs10142786 chr14 58153059 Intergenic 7 33863 CEU:1.0;1.0, CHB:1.0;0.851, JPT:1.0;0.941, YRI:1.0;0.896 FUNCTIONAL_SNP rs11625209 chr14 58156707 Intergenic 7 37511 CEU:1.0;1.0, CHB:1.0;0.851, JPT:1.0;0.941, YRI:1.0;0.896 FUNCTIONAL_SNP rs7160052 chr14 58138699 Intergenic 7 19503 CEU:1.0;1.0, CHB:1.0;0.849, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs7152247 chr14 58119752 Intergenic 7 556 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs17093240 chr14 58126646 Intergenic 7 7450 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 LEAD_SNP rs8013190 chr14 58355048 Intergenic 7 ASSOCIATION 20041166 HIV-1 control 7.15490195999 SLC35F4 - C14orf37 LEAD_SNP rs1335515 chr14 58385365 Intergenic 5b ASSOCIATION 18937294 Attention deficit hyperactivity disorder (time to onset) 5.09691001301 SLC35F4 - C14orf37 LEAD_SNP rs808225 chr14 58397916 Intergenic 7 ASSOCIATION 17903307 Pulmonary function traits (other) 5.15490195999 SLC35F4 - C14orf37 LEAD_SNP rs4901869 chr14 59334128 Intergenic 7 ASSOCIATION 19165232 Panic disorder 5.22184874962 RPL31P4 - AKR1B1P5 LEAD_SNP rs2093210 chr14 60957279 Intergenic 7 ASSOCIATION 20881960 Height 16.2218487496 C14orf39 - SIX6 LEAD_SNP rs10483727 chr14 61072875 Intergenic 6 ASSOCIATION 20548946 Vertical cup-disc ratio 11.0 RPS15AP4 - SIX1 ASSOCIATION 20395239 Optic disc size (rim) 5.04575749056 RPS15AP4 - SIX1 FUNCTIONAL_SNP rs7159392 chr14 61008596 Intergenic 6 64279 CEU:0.952;0.865, CHB:1.0;1.0, JPT:0.94;0.884, YRI:1.0;0.66 FUNCTIONAL_SNP rs4442732 chr14 61025617 Intergenic 6 47258 CEU:0.951;0.863, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs2351174 chr14 61013237 Intergenic 7 59638 CEU:0.955;0.873, CHB:1.0;1.0, JPT:1.0;0.943 LEAD_SNP rs8005745 chr14 62185295 Intron 7 ASSOCIATION 17903293 Select biomarker traits 5.39794000867 HIF1A FUNCTIONAL_SNP rs2301108 chr14 62197464 Intron 5b 12169 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 LEAD_SNP rs6573416 chr14 62518348 Intron 7 ASSOCIATION 20707712 Self-rated health 5.52287874528 SYT16 LEAD_SNP rs973968 chr14 62654698 Intergenic 7 ASSOCIATION 19084217 Serum markers of iron status 5.52287874528 FLJ43390 - KCNH5 FUNCTIONAL_SNP rs12434691 chr14 62655077 Intergenic 7 379 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1514928 chr14 62678303 Intergenic 7 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.52287874528 FLJ43390 - KCNH5 FUNCTIONAL_SNP rs10131217 chr14 62673825 Intergenic 7 4478 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11158493 chr14 63953522 Intron 5b ASSOCIATION 21659360 Response to antineoplastic agents 6.04575749056 PPP2R5E FUNCTIONAL_SNP rs8007996 chr14 63944430 Intron 5b 9092 CEU:0.94;0.883, CHB:1.0;0.85, JPT:1.0;0.863, YRI:0.834;0.642 FUNCTIONAL_SNP rs4902232 chr14 63958758 Intron 5b 5236 CEU:1.0;0.827, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs10148185 chr14 63921188 Intron 6 32334 CEU:0.94;0.883, CHB:1.0;0.732, JPT:1.0;0.777, YRI:0.832;0.639 FUNCTIONAL_SNP rs10129170 chr14 63943928 Intron 7 9594 CEU:1.0;0.94, CHB:1.0;0.735, JPT:1.0;0.783, YRI:0.853;0.728 FUNCTIONAL_SNP rs8016306 chr14 63928546 Intron 7 24976 CEU:1.0;0.937, CHB:1.0;0.761, JPT:1.0;0.852, YRI:0.853;0.728 FUNCTIONAL_SNP rs17101242 chr14 63954531 Intron 7 1009 CEU:1.0;0.8, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.513 LEAD_SNP rs7157785 chr14 64235556 Intergenic 5a ASSOCIATION 19798445 Sphingolipid levels 65.0457574906 EIF2S2P1 - RPS28P1 FUNCTIONAL_SNP rs4902243 chr14 64234243 Intergenic 7 1313 CEU:1.0;0.847, CHB:1.0;0.823, JPT:1.0;0.864, YRI:1.0;0.555 FUNCTIONAL_SNP rs17101394 chr14 64232386 Intergenic 7 3170 CEU:1.0;0.838, CHB:1.0;0.823, JPT:1.0;0.864 FUNCTIONAL_SNP rs34817779 chr14 64236003 Intergenic 7 447 CEU:1.0;0.847, CHB:1.0;0.823, JPT:0.86;0.74, YRI:1.0;1.0 LEAD_SNP rs10498514 chr14 64899055 Intron 5b ASSOCIATION 19734545 Cognitive performance 6.09691001301 MTHFD1 LEAD_SNP rs2295639 chr14 64902116 Intron 5b ASSOCIATION 19734545 Cognitive performance 5.30102999566 MTHFD1 LEAD_SNP rs4466998 chr14 65475540 Intron 6 ASSOCIATION 19862010 Mean corpuscular volume 7.30102999566 FNTB;MAX FUNCTIONAL_SNP rs726668 chr14 65495816 Intron 4 20276 CEU:1.0;0.951, CHB:1.0;0.895, JPT:1.0;0.571 FUNCTIONAL_SNP rs7148590 chr14 65473196 Intron 4 2344 CEU:0.95;0.902, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11628273 chr14 65509878 Intron 4 34338 CEU:1.0;0.951, CHB:0.88;0.732, JPT:1.0;0.538 FUNCTIONAL_SNP rs11627531 chr14 65487796 Intron 5b 12256 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.9 FUNCTIONAL_SNP rs7155454 chr14 65502239 Intron 5b 26699 CEU:1.0;0.955, CHB:0.881;0.699, JPT:1.0;0.587 FUNCTIONAL_SNP rs12435835 chr14 65499909 Intron 6 24369 CEU:1.0;0.955, CHB:1.0;0.949, JPT:1.0;0.697 FUNCTIONAL_SNP rs4899159 chr14 65480595 Intron 6 5055 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;0.891 FUNCTIONAL_SNP rs8006419 chr14 65500735 Intron 6 25195 CEU:1.0;0.951, CHB:1.0;0.846, JPT:1.0;0.604 FUNCTIONAL_SNP rs11620955 chr14 65491255 Intron 6 15715 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs4586342 chr14 65473875 Intron 7 1665 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs7158173 chr14 65645250 Intergenic 7 ASSOCIATION 19260139 Anthropometric traits 5.39794000867 MAX - RPL21P7 FUNCTIONAL_SNP rs12147743 chr14 65644204 Intergenic 7 1046 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1256531 chr14 65747759 Intergenic 2a ASSOCIATION 20585324 Conduct disorder (symptom count) 5.39794000867 PTBP1P - FUT8 LEAD_SNP rs7159888 chr14 65758642 Intergenic 5b ASSOCIATION 21203500 N-glycan levels 17.5228787453 PTBP1P - FUT8 LEAD_SNP rs10483776 chr14 65914867 Intron 6 ASSOCIATION 21203500 N-glycan levels 8.0 FUT8 FUNCTIONAL_SNP rs17753508 chr14 66057452 Intron 5b 142585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91 LEAD_SNP rs8007846 chr14 66262963 Intergenic 5b ASSOCIATION 20802204 Multiple sclerosis--Brain Glutamate Levels 5.04575749056 RPL21P8 - NCOA4P1 FUNCTIONAL_SNP rs8018379 chr14 66261937 Intergenic 5a 1026 CEU:1.0;0.815, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.919 LEAD_SNP rs911263 chr14 68753593 Intron 5b ASSOCIATION 21399635 Primary biliary cirrhosis 10.6989700043 RAD51L1 FUNCTIONAL_SNP rs8008961 chr14 68752643 Intron 2b 950 CEU:1.0;1.0 FUNCTIONAL_SNP rs3784099 chr14 68749927 Intron 4 3666 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17105278 chr14 68728479 Intron 5a 25114 CEU:1.0;0.955, CHB:1.0;0.546 FUNCTIONAL_SNP rs7148416 chr14 68747868 Intron 6 5725 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.746 FUNCTIONAL_SNP rs1957570 chr14 68729224 Intron 6 24369 CEU:1.0;0.955, CHB:1.0;0.546, YRI:0.886;0.586 FUNCTIONAL_SNP rs2208397 chr14 68753287 Intron 7 306 CEU:1.0;1.0 LEAD_SNP rs1956529 chr14 68788924 Intron 7 ASSOCIATION 20195514 Primary tooth development (number of teeth) 7.52287874528 RAD51L1 FUNCTIONAL_SNP rs3784108 chr14 68789683 Intron 2b 759 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1956532 chr14 68783274 Intron 2b 5650 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs2064912 chr14 68807132 Intron 4 18208 CEU:1.0;1.0, CHB:0.947;0.898, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2180770 chr14 68773353 Intron 4 15571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.606 FUNCTIONAL_SNP rs3784104 chr14 68773469 Intron 4 15455 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11158728 chr14 68762205 Intron 4 26719 CEU:1.0;0.959, CHB:1.0;0.65, JPT:1.0;0.71 FUNCTIONAL_SNP rs7150988 chr14 68793704 Intron 4 4780 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11158730 chr14 68812756 Intron 4 23832 CEU:1.0;1.0, CHB:0.935;0.625, JPT:1.0;0.864, YRI:1.0;0.534 FUNCTIONAL_SNP rs2064911 chr14 68807298 Intron 4 18374 CEU:1.0;1.0, CHB:0.95;0.902, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10483807 chr14 68808824 Intron 4 19900 CEU:1.0;1.0, CHB:0.935;0.625, JPT:1.0;0.864, YRI:1.0;0.534 FUNCTIONAL_SNP rs1956525 chr14 68799859 Intron 5a 10935 CEU:1.0;0.958, CHB:0.924;0.506, JPT:1.0;0.612 FUNCTIONAL_SNP rs1956526 chr14 68799787 Intron 5a 10863 CEU:1.0;0.958, CHB:0.924;0.506, JPT:1.0;0.612 FUNCTIONAL_SNP rs2145423 chr14 68796930 Intron 5b 8006 CEU:1.0;1.0, CHB:1.0;0.785, JPT:1.0;0.71 FUNCTIONAL_SNP rs7148073 chr14 68777042 Intron 5b 11882 CEU:1.0;0.918, CHB:1.0;0.714, JPT:1.0;0.902 FUNCTIONAL_SNP rs12880109 chr14 68813032 Intron 5b 24108 CEU:1.0;1.0, CHB:0.935;0.625, JPT:1.0;0.864, YRI:1.0;0.534 FUNCTIONAL_SNP rs12890124 chr14 68781614 Intron 5b 7310 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12883719 chr14 68810217 Intron 6 21293 CEU:1.0;1.0, CHB:0.95;0.902, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7147852 chr14 68796799 Intron 6 7875 CEU:1.0;1.0, CHB:1.0;0.785, JPT:1.0;0.71 FUNCTIONAL_SNP rs12892777 chr14 68778913 Intron 6 10011 CEU:1.0;1.0, CHB:1.0;0.714, JPT:1.0;0.864 FUNCTIONAL_SNP rs11627646 chr14 68809564 Intron 6 20640 CEU:1.0;1.0, CHB:0.95;0.902, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12878858 chr14 68786797 Intron 7 2127 CEU:1.0;1.0, CHB:1.0;0.714, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs2145422 chr14 68797169 Intron 7 8245 CEU:1.0;1.0, CHB:1.0;0.785, JPT:1.0;0.71 FUNCTIONAL_SNP rs2877455 chr14 68760986 Intron 7 27938 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs911254 chr14 68805323 Intron 7 16399 CEU:1.0;1.0, CHB:0.935;0.625, JPT:1.0;0.864, YRI:1.0;0.534 FUNCTIONAL_SNP rs8017304 chr14 68785077 Intron 7 3847 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1956524 chr14 68800393 Intron 7 11469 CEU:1.0;1.0, CHB:0.946;0.895, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1956528 chr14 68788968 Intron 7 44 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3825730 chr14 68790579 Intron 7 1655 CEU:1.0;1.0, CHB:1.0;0.714, JPT:1.0;0.864, YRI:1.0;0.654 FUNCTIONAL_SNP rs7158493 chr14 68812330 Intron 7 23406 CEU:1.0;1.0, CHB:0.95;0.902, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7146850 chr14 68787881 Intron 7 1043 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.652 FUNCTIONAL_SNP rs2013413 chr14 68805451 Intron 7 16527 CEU:1.0;0.959, CHB:0.938;0.658, JPT:1.0;0.864, YRI:1.0;0.534 FUNCTIONAL_SNP rs12885750 chr14 68770031 Intron 7 18893 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs999737 chr14 69034682 Intron 7 ASSOCIATION 19330030 Breast cancer 6.69897000434 RAD51L1 LEAD_SNP rs4902642 chr14 69210199 Intergenic 5a ASSOCIATION 21102463 Crohn's disease 9.69897000434 RPL12P7 - ZFP36L1 LEAD_SNP rs1465788 chr14 69263599 Intergenic 4 ASSOCIATION 19430480 Type 1 diabetes 11.6989700043 C14orf181 FUNCTIONAL_SNP rs6573857 chr14 69263074 Exon,non-coding 4 525 CEU:0.949;0.901, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs3742887 chr14 69262441 Exon,non-coding 4 1158 CEU:1.0;1.0, CHB:1.0;0.874, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs2236263 chr14 69261162 Exon,non-coding 4 2437 CEU:1.0;0.862, CHB:1.0;0.874, JPT:1.0;0.944, YRI:0.959;0.919 FUNCTIONAL_SNP rs1595260 chr14 69267695 Intergenic 5b 4096 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4899260 chr14 69278204 Intergenic 5b ASSOCIATION 20190752 Celiac disease 6.39794000867 C14orf181 - MAGOH3P FUNCTIONAL_SNP rs1274955 chr14 69289312 Intergenic 2b 11108 CEU:1.0;0.855, YRI:0.963;0.893 FUNCTIONAL_SNP rs194743 chr14 69286152 Intergenic 4 7948 CEU:1.0;0.855, YRI:1.0;0.964 FUNCTIONAL_SNP rs4902652 chr14 69280309 Intergenic 5b 2105 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8019383 chr14 69277341 Intergenic 6 863 CEU:1.0;1.0, YRI:1.0;0.72 FUNCTIONAL_SNP rs10139199 chr14 69277800 Intergenic 6 404 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs194732 chr14 69306299 Intergenic 7 28095 CEU:1.0;0.855, YRI:0.853;0.727 LEAD_SNP rs2268983 chr14 69408697 Intron 4 ASSOCIATION 19247474 Smoking behavior 5.15490195999 ACTN1 LEAD_SNP rs12883884 chr14 70517183 Intron 5b ASSOCIATION 21602797 Cystic fibrosis severity 5.09691001301 SLC8A3 LEAD_SNP rs17108533 chr14 71249802 Intron 6 ASSOCIATION 21107309 Reasoning 6.0 MAP3K9 LEAD_SNP rs36563 chr14 71352648 Intergenic 5a ASSOCIATION 19581569 Alcohol dependence 5.30102999566 MAP3K9 - PCNX FUNCTIONAL_SNP rs36562 chr14 71353113 Intergenic 7 465 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11848785 chr14 72057355 Intron 7 ASSOCIATION 21076409 Ventricular conduction 10.0 SIPA1L1 FUNCTIONAL_SNP rs1859643 chr14 72055468 Coding 5a 1887 CEU:1.0;0.957, CHB:1.0;0.602, JPT:1.0;0.79, YRI:1.0;0.589 FUNCTIONAL_SNP rs7148679 chr14 72160321 Intron 2b 102966 CEU:1.0;0.914, JPT:1.0;0.79 FUNCTIONAL_SNP rs2108057 chr14 72022750 Intron 2c 34605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs12433040 chr14 72030555 Intron 3a 26800 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs10135680 chr14 72030809 Intron 3a 26546 CEU:1.0;0.87, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs17767686 chr14 72006744 Intron 4 50611 CEU:1.0;0.957, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs10873246 chr14 72153693 Intron 4 96338 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs7142343 chr14 72023489 Intron 4 33866 CEU:1.0;0.913, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs17767553 chr14 71910587 Intergenic 5a 146768 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs7140501 chr14 72023175 Intron 5a 34180 CEU:1.0;0.957, CHB:1.0;0.602, JPT:1.0;0.79, YRI:1.0;0.589 FUNCTIONAL_SNP rs12880291 chr14 71884567 Intergenic 5a 172788 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs14030 chr14 71956141 Intergenic 5a 101214 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.823 FUNCTIONAL_SNP rs12127 chr14 71956270 Intergenic 5a 101085 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.823 FUNCTIONAL_SNP rs8013161 chr14 72021499 Intron 5a 35856 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs3784066 chr14 72007454 Intron 5b 49901 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs8006300 chr14 72050162 Intron 5b 7193 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6574016 chr14 72040525 Intron 5b 16830 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs12885344 chr14 72003224 Intron 5b 54131 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs17767499 chr14 71867275 Intergenic 5b 190080 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs3825719 chr14 72053097 Intron 5b 4258 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs7156313 chr14 72052310 Intron 5b 5045 CEU:1.0;0.912, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs757850 chr14 72016006 Intron 5b 41349 CEU:1.0;0.957, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs17178387 chr14 71997723 Intron 6 59632 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs4902942 chr14 72140659 Intron 6 83304 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs7152674 chr14 72016613 Intron 6 40742 CEU:1.0;0.957, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs2214836 chr14 72025078 Intron 6 32277 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs1029570 chr14 72043200 Intron 6 14155 CEU:1.0;0.957, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs4899398 chr14 72083441 Intron 6 26086 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs10483836 chr14 72001614 Intron 6 55741 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs2332638 chr14 72028915 Intron 6 28440 CEU:1.0;0.913, CHB:1.0;0.601, JPT:1.0;0.79 FUNCTIONAL_SNP rs2332641 chr14 72044728 Intron 6 12627 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs8017775 chr14 72029436 Intron 6 27919 CEU:1.0;0.957, CHB:1.0;0.602, JPT:1.0;0.79, YRI:1.0;1.0 FUNCTIONAL_SNP rs7157241 chr14 72001296 Intron 6 56059 CEU:1.0;0.956 FUNCTIONAL_SNP rs9672060 chr14 72010126 Intron 6 47229 CEU:1.0;0.956, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs3784062 chr14 72090505 Intron 6 33150 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs3784064 chr14 72059551 Intron 7 2196 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs12889866 chr14 71937439 Intergenic 7 119916 CEU:1.0;0.9, CHB:1.0;0.601, JPT:1.0;0.789 FUNCTIONAL_SNP rs8014349 chr14 72046496 Intron 7 10859 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs1981588 chr14 72039689 Intron 7 17666 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs8003478 chr14 72120363 Intron 7 63008 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs8008605 chr14 72045544 Intron 7 11811 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs2190240 chr14 72024889 Intron 7 32466 CEU:1.0;0.957, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs2877729 chr14 71887868 Intergenic 7 169487 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs12881957 chr14 71909854 Intergenic 7 147501 CEU:1.0;0.957, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs725673 chr14 71878468 Intergenic 7 178887 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs12880188 chr14 72009745 Intron 7 47610 CEU:1.0;0.954, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs12896900 chr14 71970625 Intergenic 7 86730 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs17767523 chr14 71880739 Intergenic 7 176616 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs2109276 chr14 71889767 Intergenic 7 167588 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs2332640 chr14 72044547 Intron 7 12808 CEU:1.0;0.957, CHB:1.0;0.602, JPT:1.0;0.79, YRI:1.0;1.0 FUNCTIONAL_SNP rs12896986 chr14 71922893 Intergenic 7 134462 CEU:1.0;0.911, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs17767680 chr14 71997594 Intron 7 59761 CEU:1.0;0.957, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs17178206 chr14 71880093 Intergenic 7 177262 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs9323561 chr14 72031563 Intron 7 25792 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs10139519 chr14 72109270 Intron 7 51915 CEU:1.0;0.914, CHB:1.0;0.602, JPT:1.0;0.79 FUNCTIONAL_SNP rs4140797 chr14 72162978 Intron 7 105623 CEU:1.0;0.914, JPT:1.0;0.79 LEAD_SNP rs7159300 chr14 72883874 Intron 4 ASSOCIATION 20811658 Smoking cessation 5.39794000867 RGS6 FUNCTIONAL_SNP rs12435911 chr14 72874971 Intron 5b 8903 CEU:1.0;0.868, CHB:0.916;0.776, JPT:1.0;0.723, YRI:1.0;1.0 FUNCTIONAL_SNP rs7151688 chr14 72882133 Intron 7 1741 CEU:1.0;0.868, YRI:1.0;1.0 FUNCTIONAL_SNP rs11158954 chr14 72882397 Intron 7 1477 CEU:1.0;0.865, CHB:0.922;0.851, JPT:1.0;0.767, YRI:1.0;1.0 LEAD_SNP rs4903031 chr14 73019236 Intron 7 ASSOCIATION 21300955 C-reactive protein 5.30102999566 RGS6 LEAD_SNP rs10483853 chr14 73756299 Intron 2b ASSOCIATION 17903303 Coronary artery calcification 5.22184874962 NUMB FUNCTIONAL_SNP rs909216 chr14 73733410 Intron 4 22889 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.935, YRI:1.0;0.946 FUNCTIONAL_SNP rs17126584 chr14 73754746 Intron 7 1553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2239557 chr14 74551970 Intron 4 ASSOCIATION 20585627 Common traits (Other) 6.52287874528 ALDH6A1;LIN52 LEAD_SNP rs862034 chr14 74990746 Intron 5b ASSOCIATION 20881960 Height 13.15490196 LTBP2 FUNCTIONAL_SNP rs862031 chr14 74991855 Coding 5b 1109 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0 FUNCTIONAL_SNP rs862049 chr14 74981882 Intron 4 8864 CEU:1.0;0.909, CHB:0.904;0.69, JPT:1.0;0.931 FUNCTIONAL_SNP rs862033 chr14 74991028 Intron 5b 282 CEU:1.0;1.0, CHB:1.0;0.928, JPT:1.0;1.0 FUNCTIONAL_SNP rs862057 chr14 74978865 Intron 5b 11881 CEU:1.0;0.909, CHB:0.904;0.69, JPT:1.0;0.925 FUNCTIONAL_SNP rs699370 chr14 74989119 Intron 5b 1627 CEU:1.0;0.909, CHB:0.911;0.765, JPT:1.0;0.931 FUNCTIONAL_SNP rs699371 chr14 74989433 Intron 5b 1313 CEU:1.0;0.909, CHB:0.882;0.543, JPT:1.0;0.738 FUNCTIONAL_SNP rs1005154 chr14 74978336 Intron 6 12410 CEU:1.0;0.911, CHB:0.909;0.705, JPT:1.0;0.932 FUNCTIONAL_SNP rs862052 chr14 74980816 Intron 7 9930 CEU:1.0;0.907, CHB:0.904;0.69, JPT:1.0;0.931 LEAD_SNP rs8014204 chr14 75322794 Intron 5b ASSOCIATION 21490707 Caffeine consumption 5.30102999566 PROX2 FUNCTIONAL_SNP rs3742786 chr14 75373011 Exon,non-coding 2b 50217 CEU:1.0;0.924, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs10083386 chr14 75347585 Intergenic 2b 24791 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs2080087 chr14 75365062 Intron 2b 42268 CEU:1.0;0.924, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs3742790 chr14 75308758 Intergenic 3a 14036 CEU:1.0;0.961, CHB:0.896;0.764, JPT:1.0;0.953 FUNCTIONAL_SNP rs2359240 chr14 75328247 Intron 3a 5453 CEU:1.0;0.961, CHB:1.0;0.865, JPT:1.0;0.907 FUNCTIONAL_SNP rs1319171 chr14 75334096 Intergenic 5b 11302 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10483863 chr14 75322327 Intron 5b 467 CEU:1.0;1.0, CHB:1.0;0.86, JPT:1.0;0.867 FUNCTIONAL_SNP rs4903262 chr14 75340818 Intergenic 5b 18024 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs12889277 chr14 75229376 Intergenic 5b 93418 CEU:1.0;0.865, CHB:0.927;0.678, JPT:1.0;0.946 FUNCTIONAL_SNP rs6574200 chr14 75364451 Intron 5b 41657 CEU:1.0;0.924, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2241275 chr14 75251440 Intron 5b 71354 CEU:0.92;0.846, CHB:0.896;0.764, JPT:1.0;0.953 FUNCTIONAL_SNP rs11159105 chr14 75298052 Intron 6 24742 CEU:1.0;0.914, CHB:0.896;0.764, JPT:1.0;0.953 FUNCTIONAL_SNP rs7153700 chr14 75268544 Intron 6 54250 CEU:1.0;0.924, CHB:0.896;0.764, JPT:1.0;0.953 FUNCTIONAL_SNP rs12888998 chr14 75292662 Intron 6 30132 CEU:1.0;0.924, CHB:0.896;0.764, JPT:1.0;0.953 FUNCTIONAL_SNP rs2300596 chr14 75353855 Intron 6 31061 CEU:1.0;0.924, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs7154256 chr14 75252587 Intron 6 70207 CEU:0.92;0.846, CHB:0.896;0.764, JPT:1.0;0.953 FUNCTIONAL_SNP rs11159104 chr14 75293374 Intron 6 29420 CEU:1.0;0.96, CHB:0.896;0.764, JPT:1.0;0.952 FUNCTIONAL_SNP rs2070599 chr14 75361177 Intron 6 38383 CEU:1.0;0.924, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs4899536 chr14 75316614 Intergenic 6 6180 CEU:1.0;0.961, CHB:0.896;0.764, JPT:1.0;0.953 FUNCTIONAL_SNP rs888413 chr14 75267396 Intron 6 55398 CEU:1.0;0.924, CHB:0.892;0.722, JPT:1.0;0.953 FUNCTIONAL_SNP rs2241274 chr14 75251331 Intron 6 71463 CEU:0.92;0.846, CHB:0.896;0.764, JPT:1.0;0.952 FUNCTIONAL_SNP rs8021280 chr14 75290018 Intron 7 32776 CEU:1.0;0.924, CHB:0.893;0.758, JPT:1.0;0.953 FUNCTIONAL_SNP rs2287403 chr14 75259140 Intron 7 63654 CEU:0.92;0.846, CHB:0.885;0.741, JPT:1.0;0.832 FUNCTIONAL_SNP rs1799900 chr14 75367740 Intron 7 44946 CEU:1.0;0.924, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs12588415 chr14 75278211 Intron 7 44583 CEU:1.0;0.924, CHB:0.896;0.764, JPT:1.0;0.953 LEAD_SNP rs910316 chr14 75626042 Intron 4 ASSOCIATION 19343178 Height 7.0 TMED10 FUNCTIONAL_SNP rs3742778 chr14 75538217 Coding 6 87825 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10146482 chr14 75574087 Coding 6 51955 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11159116 chr14 75550584 Exon,non-coding 7 75458 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs1043674 chr14 75549370 Exon,non-coding 7 76672 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4322591 chr14 75600697 Exon,non-coding 5a 25345 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12889309 chr14 75593902 Intergenic 4 32140 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.841, YRI:1.0;0.945 FUNCTIONAL_SNP rs12890371 chr14 75593839 Intergenic 4 32203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4899545 chr14 75568138 Intron 5b 57904 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4899546 chr14 75594946 Intergenic 5b 31096 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10149880 chr14 75633008 Intron 5b 6966 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10142770 chr14 75525449 Intron 6 100593 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs2300601 chr14 75639571 Intron 6 13529 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs876402 chr14 75601862 Intron 6 24180 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8003506 chr14 75586288 Intron 6 39754 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11623413 chr14 75588824 Intron 6 37218 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7142235 chr14 75559963 Intron 7 66079 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7156105 chr14 75541954 Intron 7 84088 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7155603 chr14 75960536 Intergenic 7 ASSOCIATION 20453842 Rheumatoid arthritis 7.0 JDP2 - BATF FUNCTIONAL_SNP rs4903324 chr14 75961511 Intergenic 4 975 CEU:1.0;1.0, CHB:1.0;0.881, JPT:1.0;0.903, YRI:1.0;0.867 FUNCTIONAL_SNP rs2192612 chr14 75967615 Intergenic 5b 7079 CEU:1.0;1.0, CHB:0.801;0.542, JPT:1.0;0.909, YRI:1.0;0.787 FUNCTIONAL_SNP rs7155418 chr14 75960449 Intergenic 5b 87 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3759738 chr14 75983051 Intergenic 6 22515 CEU:1.0;1.0, YRI:0.948;0.778 FUNCTIONAL_SNP rs8007016 chr14 75974691 Intergenic 7 14155 CEU:1.0;1.0, YRI:0.949;0.753 FUNCTIONAL_SNP rs10136427 chr14 75979889 Intergenic 7 19353 CEU:1.0;1.0 FUNCTIONAL_SNP rs4899567 chr14 75978690 Intergenic 7 18154 CEU:1.0;1.0, YRI:1.0;0.824 FUNCTIONAL_SNP rs2359733 chr14 75971400 Intergenic 7 10864 CEU:1.0;1.0 LEAD_SNP rs935334 chr14 76613678 Intergenic 7 ASSOCIATION 17903302 Blood pressure 5.52287874528 C14orf179 - C14orf118 FUNCTIONAL_SNP rs4899586 chr14 76660856 Intron 4 47178 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs2543376 chr14 76609923 Intergenic 5b 3755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.856 FUNCTIONAL_SNP rs4903386 chr14 76669658 Intergenic 5b 55980 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs1900125 chr14 76657470 Intron 5b 43792 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs11159183 chr14 76662902 Intron 6 49224 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs1900124 chr14 76656666 Intron 6 42988 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs6574278 chr14 76663838 Intron 7 50160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.921 LEAD_SNP rs2121070 chr14 76650764 Intron 5b ASSOCIATION 17903302 Blood pressure 5.30102999566 C14orf118 FUNCTIONAL_SNP rs2591092 chr14 76630133 Intron 2c 20631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.967 FUNCTIONAL_SNP rs2543382 chr14 76624887 Intron 6 25877 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2543383 chr14 76626703 Intron 6 24061 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;0.964 FUNCTIONAL_SNP rs4389088 chr14 76647597 Intron 6 3167 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.967 FUNCTIONAL_SNP rs4442739 chr14 76647645 Intron 6 3119 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2543384 chr14 76627301 Intron 7 23463 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.967 FUNCTIONAL_SNP rs2543387 chr14 76629046 Intron 7 21718 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.967 FUNCTIONAL_SNP rs12437310 chr14 76642757 Intron 7 8007 CEU:1.0;0.927, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.893 FUNCTIONAL_SNP rs1900120 chr14 76626516 Intron 7 24248 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2197480 chr14 76625442 Intron 7 25322 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.967 FUNCTIONAL_SNP rs4304957 chr14 76647572 Intron 7 3192 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2591094 chr14 76632335 Intron 7 18429 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.967 LEAD_SNP rs2360997 chr14 76812491 Intergenic 7 ASSOCIATION 18846501 Attention deficit hyperactivity disorder symptoms (interaction) 5.09691001301 C14orf118 - ESRRB LEAD_SNP rs11624704 chr14 78786077 Intron 5a ASSOCIATION 21552555 Obesity 8.52287874528 TRNASUP6P - NRXN3 FUNCTIONAL_SNP rs11624359 chr14 78791144 Intron 7 5067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs6574433 chr14 78786159 Intron 5a ASSOCIATION 20125193 Cognitive test performance 5.22184874962 TRNASUP6P - NRXN3 FUNCTIONAL_SNP rs7151974 chr14 78788255 Intron 7 2096 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.943 LEAD_SNP rs10150332 chr14 79936964 Intron 5a ASSOCIATION 20935630 Body mass index 10.5228787453 NRXN3 FUNCTIONAL_SNP rs10146997 chr14 79945162 Intron 5a 8198 CEU:1.0;1.0, YRI:1.0;0.79 FUNCTIONAL_SNP rs7144011 chr14 79940383 Intron 5a 3419 CEU:1.0;1.0 FUNCTIONAL_SNP rs7156625 chr14 79942647 Intron 5b 5683 CEU:1.0;1.0, YRI:1.0;0.856 FUNCTIONAL_SNP rs17109221 chr14 79910119 Intron 5b 26845 CEU:1.0;0.949 FUNCTIONAL_SNP rs10145154 chr14 79939525 Intron 6 2561 CEU:1.0;1.0, YRI:1.0;0.778 FUNCTIONAL_SNP rs17109256 chr14 79939993 Intron 7 3029 CEU:1.0;1.0 FUNCTIONAL_SNP rs10146690 chr14 79890456 Intron 7 46508 CEU:1.0;0.904 FUNCTIONAL_SNP rs2370982 chr14 79890677 Intron 7 46287 CEU:1.0;0.9 FUNCTIONAL_SNP rs17836088 chr14 79932041 Intron 7 4923 CEU:1.0;0.951 FUNCTIONAL_SNP rs10150482 chr14 79891882 Intron 7 45082 CEU:1.0;0.949 LEAD_SNP rs10146997 chr14 79945162 Intron 5a ASSOCIATION 19557197 Waist circumference 7.30102999566 NRXN3 FUNCTIONAL_SNP rs10150332 chr14 79936964 Intron 5a 8198 CEU:1.0;1.0, YRI:1.0;0.79 FUNCTIONAL_SNP rs7144011 chr14 79940383 Intron 5a 4779 CEU:1.0;1.0, YRI:1.0;0.551 FUNCTIONAL_SNP rs17109221 chr14 79910119 Intron 5b 35043 CEU:1.0;0.953, YRI:1.0;0.522 FUNCTIONAL_SNP rs7156625 chr14 79942647 Intron 5b 2515 CEU:1.0;1.0, YRI:0.872;0.701 FUNCTIONAL_SNP rs10145154 chr14 79939525 Intron 6 5637 CEU:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs10146690 chr14 79890456 Intron 7 54706 CEU:1.0;0.908 FUNCTIONAL_SNP rs2370982 chr14 79890677 Intron 7 54485 CEU:1.0;0.908, YRI:1.0;0.522 FUNCTIONAL_SNP rs17109256 chr14 79939993 Intron 7 5169 CEU:1.0;1.0, YRI:1.0;0.551 FUNCTIONAL_SNP rs17836088 chr14 79932041 Intron 7 13121 CEU:1.0;0.953 FUNCTIONAL_SNP rs10150482 chr14 79891882 Intron 7 53280 CEU:1.0;0.953, YRI:1.0;0.522 LEAD_SNP rs17111394 chr14 81523128 Intron 6 ASSOCIATION 20395239 Optic disc size (rim) 5.39794000867 TSHR FUNCTIONAL_SNP rs2215982 chr14 81522110 Intron 7 1018 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8017455 chr14 81575454 Intron 7 ASSOCIATION 19896111 Hair morphology 5.22184874962 TSHR FUNCTIONAL_SNP rs7143914 chr14 81568600 Intron 7 6854 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs11159647 chr14 84775209 Intergenic 7 ASSOCIATION 18976728 Alzheimer's disease 5.69897000434 RNU7-51P - RNU3P3 LEAD_SNP rs11624056 chr14 87506248 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 7.52287874528 FLRT2 - GALC LEAD_SNP rs8005161 chr14 88472595 Intron 5a ASSOCIATION 21102463 Crohn's disease 17.3979400087 GPR65 FUNCTIONAL_SNP rs3742704 chr14 88477882 Coding 5a 5287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11159833 chr14 88476004 Intron 5a 3409 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8014798 chr14 88456559 Intron 5b 16036 CEU:1.0;0.927, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3850378 chr14 88417517 Intron 6 55078 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17123957 chr14 88449322 Intron 7 23273 CEU:1.0;0.855 FUNCTIONAL_SNP rs11624293 chr14 88488821 Intergenic 7 16226 CEU:1.0;0.918, CHB:1.0;0.875, JPT:1.0;0.93 FUNCTIONAL_SNP rs4462528 chr14 88426297 Intron 7 46298 CEU:1.0;0.929, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs17124581 chr14 88826682 Intergenic 7 ASSOCIATION 21130836 Information processing speed 5.52287874528 KCNK10 - SPATA7 FUNCTIONAL_SNP rs17124580 chr14 88826533 Intergenic 7 149 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1955601 chr14 88831812 Intergenic 7 5130 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12100561 chr14 90301035 Intron 7 ASSOCIATION 21105107 Hepatocellular carcinoma 5.39794000867 C14orf143 LEAD_SNP rs8017423 chr14 90679910 Intergenic 6 ASSOCIATION 20400778 Mortality among heart failure patients 5.15490195999 GLRXP2 - PSMC1 FUNCTIONAL_SNP rs3737035 chr14 90745422 Coding 7 65512 CEU:1.0;0.888, CHB:0.948;0.816, JPT:0.946;0.812 FUNCTIONAL_SNP rs10184 chr14 90744672 Exon,non-coding 6 64762 CEU:0.918;0.81, CHB:0.949;0.82, JPT:0.948;0.817 FUNCTIONAL_SNP rs2277515 chr14 90723000 Intron 2b 43090 CEU:1.0;0.924, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs6575120 chr14 90725094 Intron 3a 45184 CEU:1.0;0.924, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs11621045 chr14 90714003 Intergenic 3a 34093 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.543 FUNCTIONAL_SNP rs2277514 chr14 90723059 Intron 4 43149 CEU:1.0;0.924 FUNCTIONAL_SNP rs2277516 chr14 90722824 Intergenic 4 42914 CEU:1.0;0.92, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs2277517 chr14 90722778 Intergenic 4 42868 CEU:1.0;0.924, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs17188598 chr14 90722473 Intergenic 4 42563 CEU:1.0;0.924, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs11628881 chr14 90713833 Intergenic 4 33923 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.544 FUNCTIONAL_SNP rs11159960 chr14 90740012 Intergenic 4 60102 CEU:1.0;0.888, CHB:0.949;0.82, JPT:0.948;0.817 FUNCTIONAL_SNP rs3783838 chr14 90733012 Intron 5a 53102 CEU:1.0;0.888, CHB:0.949;0.82, JPT:0.948;0.817 FUNCTIONAL_SNP rs7151776 chr14 90724803 Intron 5a 44893 CEU:1.0;0.924, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs10147186 chr14 90779879 Intron 5a 99969 CEU:1.0;0.886, CHB:0.888;0.655, JPT:0.948;0.817 FUNCTIONAL_SNP rs11621364 chr14 90709115 Intergenic 5a 29205 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.801 FUNCTIONAL_SNP rs7154695 chr14 90795705 Intron 5b 115795 CEU:1.0;0.888, CHB:0.884;0.618, JPT:0.895;0.762 FUNCTIONAL_SNP rs769044 chr14 90671138 Intergenic 5b 8772 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2282030 chr14 90730265 Intron 5b 50355 CEU:1.0;0.924, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs1959002 chr14 90670994 Intergenic 5b 8916 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.649 FUNCTIONAL_SNP rs7146640 chr14 90720114 Intergenic 5b 40204 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11628812 chr14 90713720 Intergenic 5b 33810 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.947;0.543 FUNCTIONAL_SNP rs2149647 chr14 90769539 Intron 5b 89629 CEU:1.0;0.888, CHB:0.947;0.78, JPT:0.948;0.817 FUNCTIONAL_SNP rs2151748 chr14 90694897 Intergenic 5b 14987 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;0.905 FUNCTIONAL_SNP rs7150093 chr14 90724661 Intron 6 44751 CEU:1.0;0.924, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs11626011 chr14 90693572 Intergenic 6 13662 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8011810 chr14 90685669 Intergenic 6 5759 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9944124 chr14 90791501 Intron 6 111591 CEU:1.0;0.888, CHB:0.884;0.618, JPT:0.948;0.817 FUNCTIONAL_SNP rs2401874 chr14 90682467 Intergenic 6 2557 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11624725 chr14 90713609 Intergenic 6 33699 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4900028 chr14 90685594 Intergenic 6 5684 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.649 FUNCTIONAL_SNP rs11623741 chr14 90804474 Intergenic 6 124564 CEU:1.0;0.853, JPT:0.85;0.723 FUNCTIONAL_SNP rs11626869 chr14 90788985 Intron 6 109075 CEU:1.0;0.888, CHB:0.884;0.618, JPT:0.948;0.817 FUNCTIONAL_SNP rs11159956 chr14 90715890 Intergenic 6 35980 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.952;0.662 FUNCTIONAL_SNP rs11159957 chr14 90715972 Intergenic 6 36062 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.952;0.662 FUNCTIONAL_SNP rs7160304 chr14 90752908 Intron 6 72998 CEU:1.0;0.888, CHB:0.949;0.82, JPT:0.948;0.817 FUNCTIONAL_SNP rs7154683 chr14 90700692 Intergenic 6 20782 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs8022531 chr14 90729931 Intron 7 50021 CEU:1.0;0.924, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs12889636 chr14 90689953 Intergenic 7 10043 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2184281 chr14 90685923 Intergenic 7 6013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4900030 chr14 90689813 Intergenic 7 9903 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs4904644 chr14 90665689 Intergenic 7 14221 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs4904662 chr14 90729427 Intron 7 49517 CEU:1.0;0.924, CHB:1.0;0.908, JPT:1.0;0.909 FUNCTIONAL_SNP rs7160032 chr14 90708472 Intergenic 7 28562 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.809;0.513 FUNCTIONAL_SNP rs11621127 chr14 90802050 Intergenic 7 122140 CEU:1.0;0.853, JPT:0.85;0.723 FUNCTIONAL_SNP rs7146250 chr14 90711703 Intergenic 7 31793 CEU:1.0;0.92 FUNCTIONAL_SNP rs8009493 chr14 90690083 Intergenic 7 10173 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.602 FUNCTIONAL_SNP rs2149655 chr14 90707246 Intergenic 7 27336 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.694 FUNCTIONAL_SNP rs2149656 chr14 90707508 Intergenic 7 27598 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12896540 chr14 90729392 Intron 7 49482 CEU:1.0;0.924, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs7144070 chr14 90753047 Intron 7 73137 CEU:1.0;0.912 FUNCTIONAL_SNP rs11624246 chr14 90734826 Intron 7 54916 CEU:1.0;0.888, CHB:0.949;0.82, JPT:0.948;0.817 FUNCTIONAL_SNP rs7144335 chr14 90732280 Intron 7 52370 CEU:1.0;0.888, CHB:0.949;0.82, JPT:0.898;0.769 FUNCTIONAL_SNP rs8021881 chr14 90722276 Intergenic 7 42366 CEU:1.0;0.924, CHB:1.0;0.911, JPT:1.0;0.909 FUNCTIONAL_SNP rs11159958 chr14 90716051 Intergenic 7 36141 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.652 FUNCTIONAL_SNP rs11159959 chr14 90733656 Intron 7 53746 CEU:0.958;0.848, CHB:0.948;0.817, JPT:0.946;0.812 FUNCTIONAL_SNP rs4643251 chr14 90669256 Intergenic 7 10654 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2236403 chr14 90736325 Intron 7 56415 CEU:1.0;0.886, CHB:0.949;0.82, JPT:0.948;0.817 LEAD_SNP rs2282032 chr14 90758891 Intron 6 ASSOCIATION 20834067 Longevity 6.0 C14orf102 LEAD_SNP rs7153027 chr14 92427222 Intergenic 6 ASSOCIATION 18391951 Height 10.0 FBLN5 - TRIP11 FUNCTIONAL_SNP rs2160077 chr14 92428410 Intergenic 5b 1188 CEU:1.0;0.958, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4900092 chr14 92429504 Intergenic 6 2282 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7154721 chr14 92427348 Intergenic 6 126 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8007661 chr14 92459958 Intron 7 ASSOCIATION 18391950 Height 9.22184874962 TRIP11 FUNCTIONAL_SNP rs10083447 chr14 92464427 Intron 6 4469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2295162 chr14 92438747 Intron 6 21211 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4575474 chr14 92469281 Intron 7 9323 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2295166 chr14 92453346 Intron 7 6612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2402089 chr14 92467976 Intron 7 8018 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;0.811 FUNCTIONAL_SNP rs4904830 chr14 92467080 Intron 7 7122 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1009170 chr14 92636713 Intergenic 7 ASSOCIATION 21546767 Dialysis-related mortality 5.69897000434 CPSF2 - SLC24A4 FUNCTIONAL_SNP rs7144605 chr14 92610603 Intron 3a 26110 CEU:1.0;0.951, CHB:1.0;0.953, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs3759722 chr14 92597228 Intron 6 39485 CEU:1.0;0.951, CHB:1.0;0.953, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs7141379 chr14 92592758 Intron 7 43955 CEU:1.0;0.951, CHB:1.0;0.953, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs12896399 chr14 92773663 Intergenic 7 ASSOCIATION 20585627 Eye color 22.6989700043 CPSF2 - SLC24A4 ASSOCIATION 20585627 Eye color 16.0 CPSF2 - SLC24A4 ASSOCIATION 20585627 Hair color 12.3010299957 CPSF2 - SLC24A4 ASSOCIATION 18483556 Black vs. blond hair color 20.096910013 CPSF2 - SLC24A4 ASSOCIATION 17952075 Blond vs. brown hair color 48.0 CPSF2 - SLC24A4 ASSOCIATION 17952075 Blue vs. green eyes 37.3979400087 CPSF2 - SLC24A4 FUNCTIONAL_SNP rs17184180 chr14 92780387 Intergenic 5b 6724 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs746586 chr14 92775967 Intergenic 5b 2304 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4904866 chr14 92768503 Intergenic 7 5160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs941799 chr14 92776825 Intergenic 7 3162 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1885194 chr14 92777462 Intergenic 7 3799 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4900109 chr14 92763391 Intergenic 7 10272 CEU:1.0;1.0, CHB:1.0;0.77, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4904947 chr14 92972162 Intergenic 4 ASSOCIATION 21546767 Dialysis-related mortality 5.09691001301 SLC24A4 - RIN3 LEAD_SNP rs10498635 chr14 93103309 Intron 6 ASSOCIATION 21623375 Paget's disease 10.5228787453 RIN3 FUNCTIONAL_SNP rs11624512 chr14 93111120 Intron 5b 7811 CEU:1.0;0.923 FUNCTIONAL_SNP rs7146689 chr14 93100024 Intron 5b 3285 CEU:1.0;0.923 FUNCTIONAL_SNP rs11627441 chr14 93099234 Intron 5b 4075 CEU:1.0;0.923, YRI:1.0;0.665 FUNCTIONAL_SNP rs11621587 chr14 93098339 Intron 5b 4970 CEU:1.0;0.923 FUNCTIONAL_SNP rs17184313 chr14 93102251 Intron 5b 1058 CEU:1.0;0.913, YRI:1.0;1.0 FUNCTIONAL_SNP rs11623779 chr14 93096391 Intron 7 6918 CEU:1.0;0.923, YRI:1.0;0.534 FUNCTIONAL_SNP rs8010344 chr14 93086918 Intron 7 16391 CEU:1.0;0.855, YRI:1.0;0.607 FUNCTIONAL_SNP rs1075472 chr14 93108131 Intron 7 4822 CEU:1.0;0.922 FUNCTIONAL_SNP rs754388 chr14 93115410 Intron 7 12101 CEU:1.0;0.923 LEAD_SNP rs7157940 chr14 94563193 Exon,non-coding 7 ASSOCIATION 19260139 Anthropometric traits 5.52287874528 IFI27L1 LEAD_SNP rs1187614 chr14 95671871 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.69897000434 CLMN FUNCTIONAL_SNP rs1763734 chr14 95672943 Intron 5b 1072 CEU:1.0;1.0, CHB:0.95;0.903, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1187608 chr14 95674014 Intron 5b 2143 CEU:1.0;0.923, CHB:1.0;0.901, JPT:1.0;0.953, YRI:1.0;0.832 FUNCTIONAL_SNP rs1187609 chr14 95673929 Intron 5b 2058 CEU:1.0;0.923, CHB:0.95;0.861, JPT:1.0;0.956, YRI:1.0;0.872 FUNCTIONAL_SNP rs1187612 chr14 95672878 Intron 5b 1007 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1187606 chr14 95674983 Intron 6 3112 CEU:1.0;0.839, CHB:1.0;0.906, JPT:0.95;0.903, YRI:0.959;0.791 FUNCTIONAL_SNP rs1187610 chr14 95673397 Intron 7 1526 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1187613 chr14 95672097 Intron 7 226 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1187615 chr14 95671504 Intron 7 367 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8014194 chr14 95720678 Intron 7 ASSOCIATION 20339536 Response to statin therapy 7.69897000434 CLMN LEAD_SNP rs8005962 chr14 96027153 Intergenic 4 ASSOCIATION 20694014 Tuberculosis 5.09691001301 GLRX5 - TCL6 FUNCTIONAL_SNP rs8007406 chr14 96027230 Intergenic 4 77 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs11624680 chr14 96026450 Intergenic 6 703 CEU:1.0;0.822, CHB:1.0;0.869, JPT:1.0;0.85, YRI:1.0;1.0 LEAD_SNP rs8015016 chr14 96122408 Intergenic 6 ASSOCIATION 20031603 QT interval 6.30102999566 TCL6 FUNCTIONAL_SNP rs1885421 chr14 96119128 Intergenic 4 3280 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs1885419 chr14 96118889 Intergenic 5b 3519 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.75 FUNCTIONAL_SNP rs11621695 chr14 96119509 Intergenic 6 2899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2887398 chr14 96124506 Intergenic 6 2098 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs8018690 chr14 96117784 Intergenic 7 4624 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.714 FUNCTIONAL_SNP rs7161644 chr14 96120005 Intergenic 7 2403 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7140965 chr14 96120568 Intergenic 7 1840 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11621876 chr14 96119729 Intergenic 7 2679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.894, YRI:1.0;1.0 LEAD_SNP rs7158782 chr14 96169131 Intergenic 6 ASSOCIATION 20876420 Adverse response to aromatase inhibitors 6.09691001301 TCL1B - TCL1A FUNCTIONAL_SNP rs7159713 chr14 96169577 Intergenic 7 446 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11849538 chr14 96175978 Intergenic 6 ASSOCIATION 21172079 Adverse response to aromatase inhibitors 6.15490195999 TCL1A LEAD_SNP rs2369304 chr14 96206070 Intergenic 7 ASSOCIATION 21507922 Neutrophil count 5.04575749056 TCL1A - C14orf132 LEAD_SNP rs17094273 chr14 97103807 Intergenic 7 ASSOCIATION 19340012 Tanning 7.04575749056 PAPOLA - VRK1 LEAD_SNP rs4905558 chr14 97345806 Intron 6 ASSOCIATION 21507922 Neutrophil count 5.09691001301 VRK1 FUNCTIONAL_SNP rs7156355 chr14 97293713 Intron 5a 52093 CEU:1.0;1.0, CHB:0.899;0.809, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12882853 chr14 97330150 Intron 5b 15656 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs723810 chr14 97287970 Intron 5b 57836 CEU:1.0;1.0, CHB:0.902;0.814, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10131201 chr14 97351837 Intergenic 6 6031 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.868 FUNCTIONAL_SNP rs4270096 chr14 97315536 Intron 6 30270 CEU:1.0;1.0, CHB:0.902;0.814, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs1957137 chr14 97336028 Intron 6 9778 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8013081 chr14 97283686 Intron 6 62120 CEU:1.0;0.955, CHB:0.902;0.814, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs10149107 chr14 97305926 Intron 6 39880 CEU:1.0;1.0, CHB:0.902;0.814, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs4905546 chr14 97278652 Intron 6 67154 CEU:1.0;1.0, CHB:0.902;0.814, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs1951312 chr14 97334742 Intron 6 11064 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs10146571 chr14 97338777 Intron 7 7029 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs9285600 chr14 97279220 Intron 7 66586 CEU:1.0;1.0, CHB:0.902;0.814, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs4905547 chr14 97290290 Intron 7 55516 CEU:1.0;1.0, CHB:0.902;0.813, JPT:1.0;1.0, YRI:0.951;0.823 FUNCTIONAL_SNP rs1951311 chr14 97312642 Intron 7 33164 CEU:1.0;1.0, CHB:0.902;0.814, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs10145383 chr14 97283495 Intron 7 62311 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0, YRI:1.0;0.861 FUNCTIONAL_SNP rs4900351 chr14 97353304 Intergenic 7 7498 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1471356 chr14 98303331 Intergenic 5b ASSOCIATION 20923822 Radiation response 5.04575749056 VRK1 - C14orf64 FUNCTIONAL_SNP rs898918 chr14 98301261 Intergenic 5b 2070 CEU:1.0;0.873, YRI:0.862;0.588 FUNCTIONAL_SNP rs11845180 chr14 98300869 Intergenic 6 2462 CEU:1.0;0.862, YRI:0.845;0.598 FUNCTIONAL_SNP rs11160417 chr14 98302343 Intergenic 7 988 CEU:1.0;0.873, YRI:0.862;0.588 FUNCTIONAL_SNP rs11160418 chr14 98302563 Intergenic 7 768 CEU:1.0;0.873, YRI:0.862;0.588 FUNCTIONAL_SNP rs11160419 chr14 98302584 Intergenic 7 747 CEU:1.0;0.873, YRI:0.862;0.588 FUNCTIONAL_SNP rs11845158 chr14 98300894 Intergenic 7 2437 CEU:1.0;0.863 LEAD_SNP rs4900384 chr14 98498951 Intergenic 7 ASSOCIATION 19430480 Type 1 diabetes 8.39794000867 C14orf64 - C14orf177 LEAD_SNP rs10484128 chr14 98642572 Intergenic 5b ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.22184874962 C14orf64 - C14orf177 LEAD_SNP rs1459148 chr14 98840443 Intergenic 5b ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 5.69897000434 C14orf64 - C14orf177 LEAD_SNP rs2895811 chr14 100133942 Intron 5b ASSOCIATION 21378990 Coronary heart disease 10.0 HHIPL1 FUNCTIONAL_SNP rs4624107 chr14 100127440 Intron 2b 6502 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.565 FUNCTIONAL_SNP rs10149871 chr14 100111955 Intron 4 21987 CEU:1.0;0.92, CHB:1.0;0.596, JPT:0.713;0.509 FUNCTIONAL_SNP rs17562391 chr14 100133250 Intron 5b 692 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.519 FUNCTIONAL_SNP rs4905878 chr14 100115608 Intron 5b 18334 CEU:1.0;0.959, CHB:1.0;0.596, JPT:0.713;0.509 LEAD_SNP rs7157599 chr14 100625902 Coding 4 ASSOCIATION 21658281 Sudden cardiac arrest 7.0 DEGS2 FUNCTIONAL_SNP rs7159195 chr14 100583330 Intron 5b 42572 CEU:1.0;0.828 FUNCTIONAL_SNP rs3783332 chr14 100586757 Intron 5b 39145 CEU:1.0;0.828 FUNCTIONAL_SNP rs941898 chr14 100599437 Intron 5b 26465 CEU:1.0;0.826 FUNCTIONAL_SNP rs7158754 chr14 100583349 Intron 5b 42553 CEU:1.0;0.828 FUNCTIONAL_SNP rs2181102 chr14 100583949 Intron 5b 41953 CEU:1.0;0.828 FUNCTIONAL_SNP rs11160570 chr14 100581636 Intron 5b 44266 CEU:1.0;0.828 FUNCTIONAL_SNP rs941900 chr14 100603399 Intron 7 22503 CEU:1.0;0.828 LEAD_SNP rs6575793 chr14 101032217 Intron 5b ASSOCIATION 21102462 Menarche (age at onset) 8.0 BEGAIN FUNCTIONAL_SNP rs7146574 chr14 101028818 Intron 4 3399 CEU:0.962;0.892, CHB:1.0;0.836, JPT:1.0;0.954 FUNCTIONAL_SNP rs4076891 chr14 101036824 Intergenic 4 4607 CEU:1.0;1.0, CHB:1.0;0.937, JPT:0.95;0.903 FUNCTIONAL_SNP rs8006176 chr14 101033288 Intron 5b 1071 CEU:1.0;1.0, CHB:1.0;0.937, JPT:1.0;1.0 FUNCTIONAL_SNP rs7493101 chr14 101046043 Intergenic 5b 13826 CEU:1.0;0.925, CHB:0.913;0.628, JPT:0.944;0.766 FUNCTIONAL_SNP rs7152089 chr14 101029749 Intron 5b 2468 CEU:1.0;1.0, CHB:1.0;0.781, JPT:1.0;0.785 FUNCTIONAL_SNP rs11845605 chr14 101037726 Intergenic 5b 5509 CEU:1.0;0.962, CHB:1.0;0.937, JPT:0.948;0.855 LEAD_SNP rs730570 chr14 101142890 Intergenic 4 ASSOCIATION 21573907 Type 2 diabetes 5.09691001301 C14orf70 - DLK1 FUNCTIONAL_SNP rs10141733 chr14 101142651 Intergenic 4 239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs911336 chr14 101145066 Intergenic 5b 2176 CEU:1.0;1.0 LEAD_SNP rs1884537 chr14 101251989 Intergenic 5b ASSOCIATION 20395239 Optic disc size (disc) 5.69897000434 DLK1 - MEG3 FUNCTIONAL_SNP rs11160605 chr14 101252416 Intergenic 5b 427 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12590323 chr14 101248330 Intergenic 5b 3659 CEU:1.0;0.85, CHB:0.942;0.671 LEAD_SNP rs941576 chr14 101306045 Intron 5b ASSOCIATION 19966805 Type 1 diabetes 10.0 MEG3 LEAD_SNP rs7142002 chr14 102360745 Intron 7 ASSOCIATION 20663923 Autism 5.52287874528 PPP2R5C FUNCTIONAL_SNP rs3993395 chr14 102399234 Intergenic 2a 38489 CEU:1.0;0.866, YRI:0.844;0.618 FUNCTIONAL_SNP rs1904298 chr14 102356475 Intron 4 4270 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:0.944;0.73 FUNCTIONAL_SNP rs8007030 chr14 102399354 Intergenic 4 38609 CEU:1.0;0.866, YRI:0.834;0.506 FUNCTIONAL_SNP rs6575883 chr14 102379870 Intron 5b 19125 CEU:1.0;0.866, YRI:0.898;0.733 FUNCTIONAL_SNP rs8006692 chr14 102373220 Intron 6 12475 CEU:1.0;1.0, CHB:1.0;0.515, YRI:0.948;0.78 FUNCTIONAL_SNP rs7147979 chr14 102347792 Intron 6 12953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888, YRI:1.0;0.793 FUNCTIONAL_SNP rs8021069 chr14 102372215 Intron 6 11470 CEU:1.0;1.0, CHB:1.0;0.515, YRI:0.948;0.78 FUNCTIONAL_SNP rs6575882 chr14 102359759 Intron 7 986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3783369 chr14 102381357 Intron 7 20612 CEU:1.0;0.866, YRI:0.948;0.744 FUNCTIONAL_SNP rs7145448 chr14 102361064 Intron 7 319 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0 FUNCTIONAL_SNP rs7141494 chr14 102346730 Intron 7 14015 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.648, YRI:1.0;0.849 FUNCTIONAL_SNP rs7145940 chr14 102361134 Intron 7 389 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.728 LEAD_SNP rs4906172 chr14 102454933 Intron 5b ASSOCIATION 19448619 Menopause (age at onset) 5.52287874528 DYNC1H1 FUNCTIONAL_SNP rs4906174 chr14 102495144 Intron 4 40211 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.89, YRI:1.0;0.951 FUNCTIONAL_SNP rs2253998 chr14 102496352 Intron 5b 41419 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.89, YRI:0.951;0.904 FUNCTIONAL_SNP rs1678033 chr14 102435852 Intron 5b 19081 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6575888 chr14 102443231 Intron 6 11702 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 LEAD_SNP rs10133111 chr14 103377321 Intergenic 5b ASSOCIATION 19023125 Brain imaging in schizophrenia (interaction) 5.30102999566 TRAF3 - AMN LEAD_SNP rs751837 chr14 103484825 Intron 7 ASSOCIATION 21471979 Large B-cell lymphoma 6.52287874528 CDC42BPB FUNCTIONAL_SNP rs8021471 chr14 103486375 Intron 4 1550 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs7160433 chr14 103486918 Intron 4 2093 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs1106679 chr14 103485652 Intron 7 827 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs8017161 chr14 103563195 Intergenic 4 ASSOCIATION 21399635 Primary biliary cirrhosis 12.5228787453 RPL13P6 - C14orf73 LEAD_SNP rs11622475 chr14 104509076 Intron 5b ASSOCIATION 17554300 Bipolar disorder 5.09691001301 TDRD9 FUNCTIONAL_SNP rs6576012 chr14 104400159 Intron 4 108917 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10129255 chr14 107176213 Intergenic 7 ASSOCIATION 21326860 Kawasaki disease 5.15490195999 IGHV1-69 - IGHV2-70 FUNCTIONAL_SNP rs7145738 chr14 107176853 Intergenic 3a 640 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs12590667 chr14 107187462 Intergenic 5b 11249 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs8022165 chr14 107189919 Intergenic 5b 13706 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.803 FUNCTIONAL_SNP rs6576228 chr14 107186640 Intergenic 6 10427 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs8014696 chr14 107177994 Intergenic 6 1781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.919 FUNCTIONAL_SNP rs10150241 chr14 107184184 Intergenic 6 7971 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs11846893 chr14 107187307 Intergenic 7 11094 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.85 FUNCTIONAL_SNP rs10134517 chr14 107173745 Intergenic 7 2468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs10129407 chr14 107176199 Intergenic 7 14 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3867498 chr15 25078787 Intron 7 ASSOCIATION 17903307 Pulmonary function traits (other) 6.0 SNRPN FUNCTIONAL_SNP rs17178787 chr15 25071780 Intron 7 7007 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17636733 chr15 25912339 Intergenic 7 ASSOCIATION 21348951 Cardiac hypertrophy 6.69897000434 UBE3A - ATP10A LEAD_SNP rs8043440 chr15 26973086 Intron 7 ASSOCIATION 19734545 Cognitive performance 5.69897000434 GABRB3 LEAD_SNP rs3212335 chr15 27012141 Intron 7 ASSOCIATION 20834067 Longevity 6.0 GABRB3 FUNCTIONAL_SNP rs7168574 chr15 27035094 Intron 7 22953 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.949, YRI:1.0;1.0 LEAD_SNP rs17565841 chr15 27997247 Intergenic 6 ASSOCIATION 19772629 Parkinson's disease (age of onset) 5.52287874528 GABRG3 - OCA2 LEAD_SNP rs12913832 chr15 28365618 Intron 5b ASSOCIATION 20585627 Eye color 51.5228787453 HERC2 ASSOCIATION 20585627 Eye color 300.0 HERC2 ASSOCIATION 20585627 Hair color 87.0457574906 HERC2 ASSOCIATION 20463881 Eye color traits 300.0 HERC2 ASSOCIATION 18483556 Black vs. blond hair color 102.397940009 HERC2 ASSOCIATION 18483556 Black vs. red hair color 77.0 HERC2 LEAD_SNP rs916977 chr15 28513364 Intron 7 ASSOCIATION 18252221 Iris color 43.0 HERC2 FUNCTIONAL_SNP rs1667394 chr15 28530182 Intron 6 16818 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1667394 chr15 28530182 Intron 6 ASSOCIATION 17952075 Blond vs. brown hair color 34.2218487496 HERC2 ASSOCIATION 17952075 Blue vs. brown eyes 241.0 HERC2 ASSOCIATION 17952075 Blue vs. green eyes 52.6989700043 HERC2 FUNCTIONAL_SNP rs916977 chr15 28513364 Intron 7 16818 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8033165 chr15 29006093 Intron 6 ASSOCIATION 18483556 Black vs. blond hair color 10.3010299957 WHAMML2 - GOLGA6L7P ASSOCIATION 18483556 Black vs. red hair color 11.6989700043 WHAMML2 - GOLGA6L7P LEAD_SNP rs1471225 chr15 29888396 Intergenic 5b ASSOCIATION 18821565 Inattentive symptoms 5.09691001301 NDNL2 - TJP1 FUNCTIONAL_SNP rs12898887 chr15 29888678 Intergenic 2b 282 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12911547 chr15 29889228 Intergenic 6 832 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.815 FUNCTIONAL_SNP rs7162472 chr15 29888097 Intergenic 6 299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4780250 chr15 29890026 Intergenic 6 1630 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs7163518 chr15 29889806 Intergenic 7 1410 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.916 LEAD_SNP rs17815774 chr15 31334362 Coding 7 ASSOCIATION 19721433 Response to antipsychotic treatment 5.52287874528 TRPM1 LEAD_SNP rs2125623 chr15 31829707 Intron 6 ASSOCIATION 20400778 Mortality among heart failure patients 6.0 OTUD7A FUNCTIONAL_SNP rs17228394 chr15 31820909 Intron 5a 8798 CEU:1.0;0.858, CHB:0.923;0.52, JPT:0.921;0.52 LEAD_SNP rs4779584 chr15 32994756 Intergenic 7 ASSOCIATION 18372905 Colorectal cancer 6.30102999566 SCG5 - GREM1 LEAD_SNP rs1258763 chr15 33050423 Intergenic 6 ASSOCIATION 20023658 Nonsyndromic cleft lip with or without cleft palate 6.0 GREM1 - FMN1 FUNCTIONAL_SNP rs1258756 chr15 33051810 Intergenic 6 1387 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs2600524 chr15 33053641 Intergenic 6 3218 CEU:1.0;0.913, CHB:1.0;0.796, JPT:1.0;0.864 FUNCTIONAL_SNP rs1258757 chr15 33051684 Intergenic 7 1261 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs2600519 chr15 33054523 Intergenic 7 4100 CEU:1.0;0.947, CHB:1.0;0.876, JPT:1.0;1.0, YRI:0.898;0.577 FUNCTIONAL_SNP rs1258762 chr15 33050657 Intergenic 7 234 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0 FUNCTIONAL_SNP rs2697936 chr15 33053402 Intergenic 7 2979 CEU:1.0;0.917, CHB:1.0;0.796, JPT:1.0;0.864 LEAD_SNP rs2229116 chr15 33905410 Coding 7 ASSOCIATION 20009918 Carotid atherosclerosis in HIV infection 7.52287874528 RYR3 FUNCTIONAL_SNP rs7168848 chr15 33913487 Intron 5b 8077 CEU:1.0;0.897, CHB:1.0;0.928, JPT:1.0;0.92, YRI:1.0;0.656 FUNCTIONAL_SNP rs7161819 chr15 33911933 Intron 6 6523 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10519841 chr15 33913277 Intron 7 7867 CEU:1.0;0.847, CHB:1.0;0.928, JPT:1.0;0.919 FUNCTIONAL_SNP rs7177922 chr15 33908619 Intron 7 3209 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2339313 chr15 33907233 Intron 7 1823 CEU:1.0;0.846, CHB:1.0;1.0, JPT:1.0;0.833 LEAD_SNP rs634990 chr15 35006073 Intergenic 5b ASSOCIATION 20835239 Refractive error 13.6989700043 GOLGA8B - GJD2 FUNCTIONAL_SNP rs524952 chr15 35005886 Intergenic 7 187 CEU:1.0;0.963, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4923705 chr15 36293605 Intergenic 5a ASSOCIATION 20732626 Attention deficit hyperactivity disorder 5.69897000434 ATPBD4 - COX6CP4 FUNCTIONAL_SNP rs4923706 chr15 36293810 Intergenic 5a 205 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2339987 chr15 36292850 Intergenic 7 755 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7173148 chr15 36280907 Intergenic 7 12698 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.948, YRI:1.0;0.93 FUNCTIONAL_SNP rs2879657 chr15 36287611 Intergenic 7 5994 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs1510368 chr15 36294669 Intergenic 7 1064 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs10520045 chr15 36313965 Intergenic 6 ASSOCIATION 20673876 Major depressive disorder 5.15490195999 ATPBD4 - COX6CP4 LEAD_SNP rs8041675 chr15 37342602 Intron 7 ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.39794000867 MEIS2 LEAD_SNP rs1568679 chr15 37349802 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 8.0 MEIS2 FUNCTIONAL_SNP rs4923737 chr15 37351223 Intron 3a 1421 CEU:1.0;0.907, CHB:1.0;0.797, JPT:1.0;1.0 LEAD_SNP rs16966460 chr15 38511983 Intergenic 7 ASSOCIATION 18711365 Bipolar disorder 5.39794000867 TMCO5A - SPRED1 FUNCTIONAL_SNP rs8032887 chr15 38512759 Intergenic 7 776 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11073328 chr15 38764843 Intron 7 ASSOCIATION 20595579 Longevity 8.69897000434 FAM98B FUNCTIONAL_SNP rs3936122 chr15 38791283 Intron 5a 26440 CEU:1.0;0.801, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12912109 chr15 38763793 Intron 5b 1050 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3935641 chr15 38798465 Intron 5b 33622 CEU:1.0;0.802, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs8035957 chr15 38838264 Intron 7 ASSOCIATION 18840781 Type 1 diabetes 5.39794000867 RASGRP1 FUNCTIONAL_SNP rs8032939 chr15 38834033 Intron 7 4231 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.841 LEAD_SNP rs12912251 chr15 38986368 Intergenic 4 ASSOCIATION 20351715 Bipolar disorder and major depressive disorder (combined) 6.0 RASGRP1 - C15orf53 FUNCTIONAL_SNP rs7165988 chr15 38988815 Coding 4 2447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs12916379 chr15 38991520 Exon,non-coding 7 5152 CEU:1.0;1.0, CHB:1.0;0.602, JPT:1.0;0.51 FUNCTIONAL_SNP rs7171233 chr15 38988760 Intergenic 4 2392 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.869 FUNCTIONAL_SNP rs7163869 chr15 38988391 Intergenic 4 2023 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs12903120 chr15 38988097 Intergenic 5b 1729 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs7183893 chr15 38996981 Intergenic 5b 10613 CEU:0.931;0.812, CHB:1.0;0.602, JPT:1.0;0.51, YRI:0.924;0.696 FUNCTIONAL_SNP rs7177621 chr15 38999394 Intergenic 5b 13026 CEU:1.0;0.933 FUNCTIONAL_SNP rs12898460 chr15 38986813 Intergenic 6 445 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2132157 chr15 38992547 Intergenic 6 6179 CEU:1.0;1.0, CHB:1.0;0.602, JPT:1.0;0.51, YRI:0.744;0.553 FUNCTIONAL_SNP rs12901215 chr15 38992893 Intergenic 6 6525 CEU:1.0;1.0, CHB:1.0;0.602, YRI:0.744;0.553 FUNCTIONAL_SNP rs2172835 chr15 38990171 Intron 7 3803 CEU:1.0;1.0, CHB:1.0;0.602, JPT:1.0;0.51, YRI:0.933;0.687 FUNCTIONAL_SNP rs12899449 chr15 38995491 Intergenic 7 9123 CEU:1.0;0.933, CHB:1.0;0.602, JPT:1.0;0.51, YRI:0.741;0.515 LEAD_SNP rs12899449 chr15 38995491 Intergenic 7 ASSOCIATION 18711365 Bipolar disorder 6.39794000867 C15orf53 - C15orf54 FUNCTIONAL_SNP rs12901215 chr15 38992893 Intergenic 6 2598 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.94 FUNCTIONAL_SNP rs2132157 chr15 38992547 Intergenic 6 2944 CEU:1.0;0.933, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.94 LEAD_SNP rs2624265 chr15 39148649 Intergenic 6 ASSOCIATION 19060910 Other metabolic traits 6.39794000867 C15orf53 - C15orf54 LEAD_SNP rs12907914 chr15 39315358 Intergenic 5a ASSOCIATION 21348951 Cardiac hypertrophy 6.0 C15orf53 - C15orf54 FUNCTIONAL_SNP rs10851378 chr15 39322422 Intergenic 7 7064 CEU:0.958;0.918, CHB:0.919;0.56, JPT:1.0;0.754 FUNCTIONAL_SNP rs11853413 chr15 39319573 Intergenic 7 4215 CEU:1.0;0.959, CHB:0.919;0.56, JPT:1.0;0.754 FUNCTIONAL_SNP rs11070169 chr15 39320011 Intergenic 7 4653 CEU:1.0;0.959, CHB:0.919;0.56, JPT:1.0;0.754 FUNCTIONAL_SNP rs7175659 chr15 39315897 Intergenic 7 539 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs7181230 chr15 40360741 Intergenic 4 ASSOCIATION 21533175 Serum dehydroepiandrosterone sulphate levels 10.3010299957 SRP14 - BMF FUNCTIONAL_SNP rs4497657 chr15 40359433 Exon,non-coding 4 1308 CEU:1.0;0.866, YRI:0.824;0.509 FUNCTIONAL_SNP rs7183977 chr15 40377092 Intergenic 2a 16351 CEU:1.0;0.954 FUNCTIONAL_SNP rs4924410 chr15 40339494 Intron 4 21247 CEU:1.0;0.867 FUNCTIONAL_SNP rs17723133 chr15 40365418 Intergenic 5b 4677 CEU:1.0;0.867, JPT:1.0;0.641, YRI:1.0;0.543 FUNCTIONAL_SNP rs4924413 chr15 40348697 Intron 5b 12044 CEU:1.0;0.866 FUNCTIONAL_SNP rs9972424 chr15 40365851 Intergenic 6 5110 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:0.95;0.729 FUNCTIONAL_SNP rs7497289 chr15 40333657 Intron 6 27084 CEU:1.0;0.804 FUNCTIONAL_SNP rs8026641 chr15 40338861 Intron 7 21880 CEU:1.0;0.867 FUNCTIONAL_SNP rs3923235 chr15 40371121 Intergenic 7 10380 CEU:1.0;0.867, YRI:0.947;0.742 LEAD_SNP rs16957063 chr15 42984288 Coding 7 ASSOCIATION 18464913 Protein quantitative trait loci 6.30102999566 STARD9 LEAD_SNP rs748404 chr15 43559231 Intergenic 4 ASSOCIATION 19654303 Lung cancer 6.0 TGM5 FUNCTIONAL_SNP rs17779494 chr15 43579223 Intron 5b 19992 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12911132 chr15 43560436 Intergenic 6 1205 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12909095 chr15 43558142 Intron 6 1089 CEU:1.0;1.0 LEAD_SNP rs2453533 chr15 45641225 Intergenic 7 ASSOCIATION 20383146 Chronic kidney disease 21.3010299957 SLC28A2 - GATM FUNCTIONAL_SNP rs1145086 chr15 45654327 Coding 5a 13102 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1049518 chr15 45653367 Exon,non-coding 6 12142 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1145076 chr15 45684508 Intron 4 43283 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2486274 chr15 45666228 Intron 5a 25003 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2461700 chr15 45640627 Intergenic 5a 598 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1153862 chr15 45631868 Intergenic 5a 9357 CEU:1.0;1.0, CHB:1.0;0.758, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2467853 chr15 45698793 Intron 6 57568 CEU:1.0;1.0 FUNCTIONAL_SNP rs1346267 chr15 45690989 Intron 6 49764 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1145077 chr15 45683795 Intron 6 42570 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1145093 chr15 45649813 Intergenic 6 8588 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1153845 chr15 45724729 Intron 6 83504 CEU:1.0;0.804 FUNCTIONAL_SNP rs1153860 chr15 45636584 Intergenic 6 4641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1719246 chr15 45625479 Intergenic 6 15746 CEU:1.0;1.0 FUNCTIONAL_SNP rs1719250 chr15 45609773 Intergenic 6 31452 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs2467862 chr15 45643843 Intergenic 7 2618 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1145080 chr15 45681338 Intron 7 40113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs872192 chr15 45614502 Intergenic 7 26723 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.79, YRI:0.862;0.583 FUNCTIONAL_SNP rs11636114 chr15 45601412 Intergenic 7 39813 CEU:0.94;0.833, CHB:1.0;1.0, JPT:1.0;0.79, YRI:0.865;0.748 FUNCTIONAL_SNP rs1426932 chr15 45687256 Intron 7 46031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2467853 chr15 45698793 Intron 6 ASSOCIATION 19430482 Renal function and chronic kidney disease 13.2218487496 SPATA5L1 LEAD_SNP rs12594515 chr15 45985071 Intergenic 5b ASSOCIATION 20966902 Waist circumference 5.15490195999 SQRDL - SEMA6D ASSOCIATION 20966902 Weight 5.30102999566 SQRDL - SEMA6D FUNCTIONAL_SNP rs11070467 chr15 45985001 Intergenic 5b 70 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:0.956;0.876 FUNCTIONAL_SNP rs11070465 chr15 45984899 Intergenic 7 172 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;0.941, YRI:1.0;0.902 FUNCTIONAL_SNP rs7172161 chr15 45990780 Intergenic 7 5709 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.918 FUNCTIONAL_SNP rs6493169 chr15 45986994 Intergenic 7 1923 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.918 FUNCTIONAL_SNP rs8025258 chr15 45987554 Intergenic 7 2483 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;0.918 LEAD_SNP rs1834640 chr15 48392165 Intergenic 6 ASSOCIATION 17999355 Skin pigmentation 50.0 RPL7AP62 - SLC24A5 LEAD_SNP rs11637235 chr15 48633153 Intron 5b ASSOCIATION 18464913 Protein quantitative trait loci 5.52287874528 DUT LEAD_SNP rs1876206 chr15 48900586 Intron 7 ASSOCIATION 17903305 Breast cancer 5.22184874962 FBN1 LEAD_SNP rs8023445 chr15 49192791 Intron 4 ASSOCIATION 21621269 Major depressive disorder 5.69897000434 SHC4 FUNCTIONAL_SNP rs12232359 chr15 49198978 Intron 6 6187 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.948;0.899 FUNCTIONAL_SNP rs12441521 chr15 49194041 Intron 6 1250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 LEAD_SNP rs4338740 chr15 49735297 Intron 6 ASSOCIATION 21565293 Thyroid volume 12.0 FGF7;C15orf33 ASSOCIATION 21565293 Thyroid volume 12.5228787453 FGF7;C15orf33 FUNCTIONAL_SNP rs7168316 chr15 49733746 Intron 4 1551 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17477923 chr15 49711185 Intron 5b 24112 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10519226 chr15 49738233 Intron 7 2936 CEU:1.0;0.825, YRI:1.0;0.784 FUNCTIONAL_SNP rs10519227 chr15 49746364 Intron 7 11067 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2899472 chr15 51516055 Intron 2b ASSOCIATION 20932310 AB1-42 8.69897000434 CYP19A1 LEAD_SNP rs2305707 chr15 51569410 Intron 4 ASSOCIATION 20189936 Height 6.15490195999 CYP19A1 LEAD_SNP rs17525472 chr15 51969668 Intergenic 6 ASSOCIATION 20159242 Asthma 5.69897000434 DMXL2 - SCG3 LEAD_SNP rs7168365 chr15 53805825 Intergenic 7 ASSOCIATION 20834067 Longevity 6.0 WDR72 FUNCTIONAL_SNP rs11856406 chr15 53812075 Intron 7 6250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.94 FUNCTIONAL_SNP rs4776155 chr15 53812457 Intron 7 6632 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.821, YRI:1.0;1.0 LEAD_SNP rs10518733 chr15 53940307 Intron 7 ASSOCIATION 20139978 Hematological and biochemical traits 7.69897000434 WDR72 FUNCTIONAL_SNP rs17730281 chr15 53907948 Coding 6 32359 CEU:1.0;0.873, CHB:1.0;0.953, JPT:1.0;0.949, YRI:1.0;0.866 FUNCTIONAL_SNP rs1105903 chr15 53919558 Intron 4 20749 CEU:1.0;0.874, CHB:0.953;0.908, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs17730323 chr15 53927089 Intron 5a 13218 CEU:1.0;0.874, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs12593967 chr15 53936948 Intron 5b 3359 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.866 FUNCTIONAL_SNP rs17730436 chr15 53942928 Intron 6 2621 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs10518731 chr15 53936418 Intron 6 3889 CEU:1.0;0.874, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs12442975 chr15 53926520 Intron 6 13787 CEU:1.0;0.874, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs4776164 chr15 53926368 Intron 6 13939 CEU:1.0;0.874, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs11070995 chr15 53923458 Intron 7 16849 CEU:1.0;0.873, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs12442962 chr15 53923225 Intron 7 17082 CEU:1.0;0.929, CHB:0.951;0.904, JPT:1.0;1.0, YRI:1.0;0.848 FUNCTIONAL_SNP rs4776168 chr15 53936907 Intron 7 3400 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs10518732 chr15 53939042 Intron 7 1265 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 LEAD_SNP rs491567 chr15 53946593 Intron 6 ASSOCIATION 20383146 Chronic kidney disease 12.5228787453 WDR72 FUNCTIONAL_SNP rs3911729 chr15 53958400 Intron 4 11807 CEU:0.941;0.885, CHB:1.0;0.66, JPT:1.0;0.867 FUNCTIONAL_SNP rs12593967 chr15 53936948 Intron 5b 9645 CEU:1.0;0.874, CHB:1.0;0.638, JPT:1.0;0.867 FUNCTIONAL_SNP rs1031755 chr15 53951435 Intron 5b 4842 CEU:1.0;0.874, CHB:1.0;0.625, JPT:1.0;0.863 FUNCTIONAL_SNP rs1031756 chr15 53951548 Intron 5b 4955 CEU:1.0;0.942, CHB:1.0;0.638, JPT:1.0;0.867 FUNCTIONAL_SNP rs17730436 chr15 53942928 Intron 6 3665 CEU:1.0;0.874, CHB:1.0;0.655, JPT:1.0;0.863 FUNCTIONAL_SNP rs732975 chr15 53950390 Intron 7 3797 CEU:1.0;0.936, CHB:0.933;0.571, JPT:0.849;0.72 FUNCTIONAL_SNP rs10518733 chr15 53940307 Intron 7 6286 CEU:1.0;0.874, CHB:1.0;0.655, JPT:1.0;0.863 FUNCTIONAL_SNP rs12442962 chr15 53923225 Intron 7 23368 CEU:0.934;0.818, CHB:0.934;0.57, JPT:1.0;0.857 FUNCTIONAL_SNP rs4776168 chr15 53936907 Intron 7 9686 CEU:1.0;0.874, CHB:1.0;0.625, JPT:1.0;0.863 FUNCTIONAL_SNP rs689651 chr15 53961320 Intron 7 14727 CEU:1.0;0.944, CHB:1.0;0.912, JPT:0.952;0.907 LEAD_SNP rs1897031 chr15 54341465 Intron 7 ASSOCIATION 19734545 Cognitive performance 6.0 UNC13C FUNCTIONAL_SNP rs11071018 chr15 54346954 Intron 7 5489 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;0.825 LEAD_SNP rs10518765 chr15 54680632 Intron 7 ASSOCIATION 17903293 Select biomarker traits 6.0 UNC13C FUNCTIONAL_SNP rs12911319 chr15 54664154 Intron 6 16478 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;0.863, YRI:1.0;0.878 LEAD_SNP rs16976033 chr15 55456510 Intergenic 5b ASSOCIATION 21507922 Neutrophil count 5.15490195999 UNC13C - RSL24D1 LEAD_SNP rs8032158 chr15 56194877 Intron 6 ASSOCIATION 20711176 Keloid 12.2218487496 NEDD4 FUNCTIONAL_SNP rs7179116 chr15 56174827 Intron 7 20050 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;0.944, YRI:0.95;0.902 LEAD_SNP rs7169431 chr15 56340896 Intergenic 5b ASSOCIATION 20062064 Chronic lymphocytic leukemia 6.30102999566 CNOT6LP1 - CD24L2 LEAD_SNP rs2934442 chr15 57762793 Intron 7 ASSOCIATION 21305692 Bipolar disorder (age of onset and psychomotor symptoms) 6.0 CGNL1 LEAD_SNP rs937254 chr15 57910164 Intron 6 ASSOCIATION 21347282 Coronary heart disease 6.0 GCOM1 LEAD_SNP rs1550576 chr15 58213414 Intergenic 3a ASSOCIATION 19609347 Hypertension 5.52287874528 GRINL1A - ALDH1A2 LEAD_SNP rs4775031 chr15 58635583 Intergenic 5b ASSOCIATION 20125193 Cognitive test performance 5.69897000434 RPL28P4 - LIPC LEAD_SNP rs4775041 chr15 58674695 Intergenic 7 ASSOCIATION 19043545 Serum metabolites 7.0 RPL28P4 - LIPC ASSOCIATION 18193043 HDL cholesterol 19.5228787453 RPL28P4 - LIPC ASSOCIATION 18193043 Triglycerides 7.69897000434 RPL28P4 - LIPC LEAD_SNP rs10468017 chr15 58678512 Intergenic 5b ASSOCIATION 21665990 Age-related macular degeneration 11.5228787453 RPL28P4 - LIPC ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 7.22184874962 RPL28P4 - LIPC ASSOCIATION 20385826 Age-related macular degeneration 8.0 RPL28P4 - LIPC ASSOCIATION 19060906 HDL cholesterol 22.096910013 RPL28P4 - LIPC FUNCTIONAL_SNP rs7350789 chr15 58679668 Intergenic 5b 1156 CEU:1.0;0.825 FUNCTIONAL_SNP rs4775041 chr15 58674695 Intergenic 7 3817 CEU:0.948;0.856, CHB:0.917;0.841, JPT:1.0;0.864, YRI:1.0;0.647 LEAD_SNP rs2043085 chr15 58680954 Intergenic 6 ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 8.0 RPL28P4 - LIPC FUNCTIONAL_SNP rs1532085 chr15 58683366 Intergenic 7 2412 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;0.518 LEAD_SNP rs1532085 chr15 58683366 Intergenic 7 ASSOCIATION 19060911 Cholesterol, total 6.39794000867 RPL28P4 - LIPC ASSOCIATION 19060911 HDL cholesterol 35.0 RPL28P4 - LIPC ASSOCIATION 19060910 HDL cholesterol 9.69897000434 RPL28P4 - LIPC LEAD_SNP rs493258 chr15 58687880 Intergenic 7 ASSOCIATION 20385819 Age-related macular degeneration 7.0 RPL28P4 - LIPC ASSOCIATION 20385826 Age-related macular degeneration 7.69897000434 RPL28P4 - LIPC FUNCTIONAL_SNP rs920915 chr15 58688467 Intergenic 4 587 CEU:1.0;0.852, CHB:1.0;0.841, JPT:1.0;0.722 FUNCTIONAL_SNP rs4775044 chr15 58684967 Intergenic 4 2913 CEU:1.0;1.0, JPT:1.0;0.592 FUNCTIONAL_SNP rs723967 chr15 58696300 Intergenic 5a 8420 CEU:0.958;0.815 LEAD_SNP rs1800588 chr15 58723675 Intron 4 ASSOCIATION 18193044 HDL cholesterol 31.6989700043 LIPC FUNCTIONAL_SNP rs2070895 chr15 58723939 Intron 2b 264 CEU:1.0;0.952, CHB:1.0;0.952, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs1077834 chr15 58723479 Intron 5a 196 CEU:1.0;0.952, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1077835 chr15 58723426 Intron 6 249 CEU:1.0;0.952, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs261334 chr15 58726744 Intron 5b ASSOCIATION 20864672 HDL cholesterol 21.3010299957 LIPC FUNCTIONAL_SNP rs8034802 chr15 58724792 Intron 2a 1952 CEU:1.0;0.825, YRI:0.855;0.571 FUNCTIONAL_SNP rs2070895 chr15 58723939 Intron 2b 2805 CEU:1.0;0.906, CHB:0.9;0.811, JPT:1.0;0.588 FUNCTIONAL_SNP rs1800588 chr15 58723675 Intron 4 3069 CEU:1.0;0.954, CHB:0.901;0.775, JPT:1.0;0.632 FUNCTIONAL_SNP rs261342 chr15 58731153 Intron 4 4409 CEU:1.0;0.954 FUNCTIONAL_SNP rs1077834 chr15 58723479 Intron 5a 3265 CEU:1.0;0.906, CHB:0.949;0.858, JPT:1.0;0.619 FUNCTIONAL_SNP rs633695 chr15 58725839 Intron 5b 905 CEU:1.0;0.825, YRI:1.0;0.721 FUNCTIONAL_SNP rs1077835 chr15 58723426 Intron 6 3318 CEU:1.0;0.906, CHB:0.949;0.858, JPT:1.0;0.619 FUNCTIONAL_SNP rs588136 chr15 58730498 Intron 6 3754 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.953 FUNCTIONAL_SNP rs261332 chr15 58727325 Intron 7 581 CEU:1.0;0.95, JPT:1.0;0.547, YRI:1.0;0.583 LEAD_SNP rs3825776 chr15 58746830 Intron 2b ASSOCIATION 18084291 Amyotrophic lateral sclerosis 5.04575749056 LIPC LEAD_SNP rs7179456 chr15 59174539 Intron 7 ASSOCIATION 21182207 Asperger disorder 5.15490195999 SLTM LEAD_SNP rs3743266 chr15 60781513 Exon,non-coding 6 ASSOCIATION 21102462 Menarche (age at onset) 6.09691001301 RORA LEAD_SNP rs340029 chr15 60894965 Intron 6 ASSOCIATION 21300955 C-reactive protein 8.39794000867 RORA FUNCTIONAL_SNP rs339969 chr15 60883281 Intron 4 11684 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0, YRI:1.0;0.618 FUNCTIONAL_SNP rs340005 chr15 60878030 Intron 4 16935 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.583 LEAD_SNP rs3784609 chr15 60910550 Intron 7 ASSOCIATION 21116278 Total ventricular volume 5.52287874528 RORA FUNCTIONAL_SNP rs11635265 chr15 60905458 Intron 7 5092 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.654 LEAD_SNP rs11071559 chr15 61069988 Intron 7 ASSOCIATION 20860503 Asthma 7.0 RORA LEAD_SNP rs12912233 chr15 61267096 Intron 7 ASSOCIATION 20800221 Depression--quantitative trait 6.22184874962 RORA FUNCTIONAL_SNP rs4775340 chr15 61267752 Intron 5b 656 CEU:1.0;0.887 LEAD_SNP rs809736 chr15 61329788 Intron 5b ASSOCIATION 19846067 Response to citalopram treatment 5.09691001301 RORA LEAD_SNP rs17271305 chr15 62332980 Intron 7 ASSOCIATION 20081857 Two-hour glucose challenge 7.0 VPS13C FUNCTIONAL_SNP rs8039105 chr15 62359085 Intergenic 2b 26105 CEU:1.0;0.829, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17271340 chr15 62347885 Intron 5a 14905 CEU:1.0;0.858, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1436958 chr15 62338797 Intron 6 5817 CEU:0.958;0.847 FUNCTIONAL_SNP rs8034335 chr15 62287456 Intron 7 45524 CEU:1.0;0.819, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8034216 chr15 62287528 Intron 7 45452 CEU:1.0;0.819, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7172432 chr15 62396389 Intergenic 5b ASSOCIATION 20818381 Type 2 diabetes 13.0457574906 C2CD4A - C2CD4B FUNCTIONAL_SNP rs7163757 chr15 62391608 Intergenic 2b 4781 CEU:1.0;1.0, CHB:1.0;0.901, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs10083587 chr15 62398533 Intergenic 5b 2144 CEU:1.0;1.0, CHB:1.0;0.906, JPT:1.0;1.0 FUNCTIONAL_SNP rs7173964 chr15 62396942 Intergenic 5b 553 CEU:0.947;0.896, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.693 FUNCTIONAL_SNP rs8037894 chr15 62394264 Intergenic 7 2125 CEU:1.0;0.96, YRI:1.0;0.691 FUNCTIONAL_SNP rs4502156 chr15 62383155 Intergenic 7 13234 CEU:1.0;0.961, CHB:1.0;0.624, JPT:0.864;0.527, YRI:1.0;0.593 FUNCTIONAL_SNP rs7167878 chr15 62396189 Intergenic 7 200 CEU:1.0;1.0, CHB:0.941;0.837, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs6494307 chr15 62394690 Intergenic 7 1699 CEU:1.0;1.0, CHB:1.0;0.906, JPT:1.0;1.0, YRI:1.0;0.711 LEAD_SNP rs1436955 chr15 62404382 Intergenic 4 ASSOCIATION 20862305 Type 2 diabetes 6.15490195999 C2CD4A - C2CD4B FUNCTIONAL_SNP rs1436954 chr15 62404480 Intergenic 3a 98 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8030240 chr15 62399564 Intergenic 7 4818 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.912;0.711 LEAD_SNP rs11071657 chr15 62433962 Intergenic 4 ASSOCIATION 20081858 Fasting glucose-related traits 7.39794000867 C2CD4A - C2CD4B FUNCTIONAL_SNP rs12440695 chr15 62435156 Intergenic 4 1194 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs17271521 chr15 62437363 Intergenic 5b 3401 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs1881413 chr15 62434797 Intergenic 7 835 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs11635220 chr15 62439166 Intergenic 7 5204 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;1.0 LEAD_SNP rs11071720 chr15 63341996 Intron 2b ASSOCIATION 19820697 Mean platelet volume 7.69897000434 TPM1 LEAD_SNP rs10519210 chr15 63737925 Intergenic 7 ASSOCIATION 20445134 Heart failure 8.0 CA12 - USP3 FUNCTIONAL_SNP rs41415146 chr15 63770087 Intergenic 7 32162 CEU:1.0;1.0 LEAD_SNP rs12595292 chr15 65153690 Coding 5b ASSOCIATION 21347282 Coronary heart disease 5.04575749056 PLEKHO2 FUNCTIONAL_SNP rs16948311 chr15 65154132 Intron 5b 442 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6494537 chr15 66051345 Intron 5a ASSOCIATION 20139978 Hematological and biochemical traits 8.52287874528 DENND4A FUNCTIONAL_SNP rs8027781 chr15 66097711 Intergenic 4 46366 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs28556680 chr15 66023799 Intron 6 27546 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs7181333 chr15 66039826 Intron 6 11519 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7167657 chr15 65964479 Intron 6 86866 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs2414885 chr15 66034624 Intron 7 16721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.889, YRI:1.0;1.0 FUNCTIONAL_SNP rs2727099 chr15 66063428 Intron 7 12083 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10431765 chr15 66044551 Intron 7 6794 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 LEAD_SNP rs17293632 chr15 67442596 Intron 2a ASSOCIATION 21102463 Crohn's disease 18.5228787453 SMAD3 FUNCTIONAL_SNP rs8032739 chr15 67448899 Intron 2b 6303 CEU:1.0;0.946 FUNCTIONAL_SNP rs1866316 chr15 67441997 Intron 2b 599 CEU:1.0;1.0 FUNCTIONAL_SNP rs7173698 chr15 67450893 Intron 5b 8297 CEU:1.0;0.947 FUNCTIONAL_SNP rs7174445 chr15 67451215 Intron 5b 8619 CEU:1.0;0.95 FUNCTIONAL_SNP rs4562997 chr15 67458152 Intron 5b 15556 CEU:1.0;0.95 FUNCTIONAL_SNP rs17228058 chr15 67450305 Intron 5b 7709 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16950687 chr15 67464013 Intron 5b 21417 CEU:0.946;0.849 FUNCTIONAL_SNP rs2033784 chr15 67449660 Intron 6 7064 CEU:1.0;0.95 LEAD_SNP rs744910 chr15 67446785 Intron 3a ASSOCIATION 20860503 Asthma 8.39794000867 SMAD3 FUNCTIONAL_SNP rs11634793 chr15 67447452 Intron 4 667 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10152544 chr15 67444747 Intron 7 2038 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17228212 chr15 67458639 Intron 5b ASSOCIATION 17634449 Coronary heart disease 6.69897000434 SMAD3 LEAD_SNP rs7359257 chr15 67702907 Intron 5a ASSOCIATION 21102462 Menarche (age at onset) 5.69897000434 IQCH FUNCTIONAL_SNP rs6494654 chr15 67681907 Intron 7 21000 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.918 FUNCTIONAL_SNP rs11071951 chr15 67694766 Intron 7 8141 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs4776924 chr15 67675547 Intron 7 27360 CEU:0.919;0.812 FUNCTIONAL_SNP rs11071952 chr15 67694780 Intron 7 8127 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 LEAD_SNP rs12593813 chr15 68036852 Intron 5b ASSOCIATION 17637780 Restless legs syndrome 15.0 MAP2K5 FUNCTIONAL_SNP rs11635424 chr15 68037578 Intron 7 726 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 LEAD_SNP rs2241423 chr15 68086838 Intron 5a ASSOCIATION 20935630 Body mass index 18.0 MAP2K5 FUNCTIONAL_SNP rs16951275 chr15 68077168 Intron 2b 9670 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs11857017 chr15 67972908 Intron 3a 113930 CEU:1.0;0.851, CHB:0.773;0.542, JPT:0.871;0.542 FUNCTIONAL_SNP rs4776982 chr15 68114974 Intron 4 28136 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.916;0.697 FUNCTIONAL_SNP rs8030456 chr15 68076856 Intron 4 9982 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.879 FUNCTIONAL_SNP rs3784710 chr15 68072458 Intron 5a 14380 CEU:1.0;0.934, CHB:1.0;0.898, JPT:1.0;0.946, YRI:1.0;0.848 FUNCTIONAL_SNP rs4776981 chr15 68109474 Intron 5a 22636 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4776976 chr15 68103291 Intron 5b 16453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.964 FUNCTIONAL_SNP rs13329582 chr15 68104608 Intron 5b 17770 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs13329413 chr15 68097126 Intron 5b 10288 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2127163 chr15 68090842 Intron 5b 4004 CEU:1.0;0.832, CHB:1.0;0.945, JPT:1.0;1.0 FUNCTIONAL_SNP rs28670272 chr15 68109907 Intron 5b 23069 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs13329567 chr15 68104367 Intron 5b 17529 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13380201 chr15 67973665 Intron 5b 113173 CEU:1.0;0.848, CHB:0.808;0.556, JPT:0.855;0.506 FUNCTIONAL_SNP rs4776964 chr15 68016955 Intron 6 69883 CEU:1.0;0.845, CHB:0.767;0.532, JPT:0.871;0.542 FUNCTIONAL_SNP rs2241420 chr15 68082816 Intron 6 4022 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4331293 chr15 67987801 Intron 6 99037 CEU:1.0;0.851, CHB:0.773;0.542, JPT:0.871;0.542 FUNCTIONAL_SNP rs2278076 chr15 68099600 Intron 6 12762 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4548812 chr15 68060552 Intron 6 26286 CEU:1.0;0.942, CHB:1.0;0.952, JPT:1.0;0.907, YRI:1.0;0.963 FUNCTIONAL_SNP rs7172055 chr15 67938334 Intron 6 148504 CEU:1.0;0.851, CHB:0.937;0.68, JPT:0.893;0.723 FUNCTIONAL_SNP rs8035989 chr15 67965620 Intron 6 121218 CEU:1.0;0.851, CHB:0.767;0.532, JPT:0.868;0.533 FUNCTIONAL_SNP rs3784707 chr15 68043878 Intron 7 42960 CEU:1.0;0.832, CHB:0.95;0.903, JPT:0.949;0.857 FUNCTIONAL_SNP rs16951304 chr15 68089618 Intron 7 2780 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8028313 chr15 68043057 Intron 7 43781 CEU:1.0;1.0, CHB:0.933;0.64, JPT:0.939;0.661, YRI:0.914;0.668 FUNCTIONAL_SNP rs4776990 chr15 68137364 Intergenic 7 50526 CEU:0.941;0.836, CHB:0.895;0.763, JPT:0.939;0.66 FUNCTIONAL_SNP rs4776375 chr15 68085555 Intron 7 1283 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6494678 chr15 67946247 Intron 7 140591 CEU:1.0;0.809, CHB:0.773;0.542, JPT:0.871;0.542 FUNCTIONAL_SNP rs7175517 chr15 68077630 Intron 7 9208 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs8025790 chr15 68076399 Intron 7 10439 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.862 LEAD_SNP rs448720 chr15 68198911 Intergenic 4 ASSOCIATION 20125193 Cognitive test performance 5.30102999566 RNU6-1 - PIAS1 FUNCTIONAL_SNP rs8035326 chr15 68208533 Intergenic 2b 9622 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs440341 chr15 68210959 Intergenic 4 12048 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs379281 chr15 68210700 Intergenic 5b 11789 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs338338 chr15 68201422 Intergenic 6 2511 CEU:1.0;0.887, CHB:1.0;0.928, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs410554 chr15 68198499 Intergenic 6 412 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2448136 chr15 68211991 Intergenic 7 13080 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs430610 chr15 68198622 Intergenic 7 289 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs338340 chr15 68202957 Intergenic 7 4046 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7163687 chr15 68193949 Intergenic 7 4962 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs383144 chr15 68204581 Intergenic 7 5670 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs449761 chr15 68210579 Intergenic 7 11668 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11853797 chr15 68200578 Intergenic 7 1667 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;1.0 LEAD_SNP rs7164335 chr15 68715032 Intron 5b ASSOCIATION 18839057 Attention deficit hyperactivity disorder 7.0 ITGA11 FUNCTIONAL_SNP rs8038368 chr15 68717075 Intron 5b 2043 CEU:1.0;0.955, CHB:1.0;0.913, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8036876 chr15 68716872 Intron 5b 1840 CEU:1.0;0.955, CHB:1.0;0.913, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8036939 chr15 68717025 Intron 5b 1993 CEU:1.0;0.955, CHB:1.0;0.913, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7164172 chr15 68714975 Intron 5b 57 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7165305 chr15 68715483 Intron 6 451 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11635776 chr15 68715459 Intron 7 427 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7165618 chr15 68715500 Intron 7 468 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4777051 chr15 68715955 Intron 7 923 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1445021 chr15 68735586 Intergenic 7 ASSOCIATION 21347282 Coronary heart disease 5.04575749056 ITGA11 - CORO2B LEAD_SNP rs11856323 chr15 68892989 Intron 5a ASSOCIATION 19734545 Cognitive performance 7.0 ITGA11 - CORO2B LEAD_SNP rs8030672 chr15 69059084 Intron 6 ASSOCIATION 21642993 Esophageal cancer 11.0 CORO2B - ANP32A LEAD_SNP rs11072089 chr15 69650053 Intron 6 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.52287874528 PAQR5 LEAD_SNP rs17374222 chr15 69995344 Intergenic 7 ASSOCIATION 20453842 Rheumatoid arthritis 5.69897000434 RPLP1 - GEMIN8P1 FUNCTIONAL_SNP rs4777183 chr15 70004775 Intergenic 7 9431 CEU:1.0;1.0, CHB:1.0;0.898, JPT:1.0;1.0, YRI:1.0;0.958 LEAD_SNP rs4776472 chr15 70006873 Intergenic 4 ASSOCIATION 17903304 Atrial fibrillation 5.09691001301 RPLP1 - GEMIN8P1 FUNCTIONAL_SNP rs4776474 chr15 70012306 Intergenic 4 5433 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4777186 chr15 70031006 Intergenic 7 24133 CEU:0.945;0.893, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;0.825 FUNCTIONAL_SNP rs11072112 chr15 70009499 Intergenic 7 2626 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7176508 chr15 70018990 Intergenic 6 ASSOCIATION 18758461 Chronic lymphocytic leukemia 11.3010299957 RPLP1 - GEMIN8P1 FUNCTIONAL_SNP rs7181030 chr15 70046503 Intergenic 5b 27513 CEU:0.955;0.912, CHB:1.0;1.0, JPT:1.0;0.865, YRI:1.0;1.0 FUNCTIONAL_SNP rs4776475 chr15 70022760 Intergenic 5b 3770 CEU:0.959;0.919, CHB:1.0;0.83, JPT:1.0;0.937, YRI:1.0;0.951 FUNCTIONAL_SNP rs4777182 chr15 69998612 Intergenic 6 20378 CEU:1.0;0.96, CHB:1.0;0.877, JPT:1.0;1.0, YRI:0.899;0.807 FUNCTIONAL_SNP rs4777184 chr15 70007323 Intergenic 6 11667 CEU:1.0;0.959, CHB:1.0;0.882, JPT:1.0;0.937, YRI:1.0;0.906 FUNCTIONAL_SNP rs4776469 chr15 69992234 Intergenic 7 26756 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;0.901 LEAD_SNP rs6494849 chr15 70480614 Intergenic 7 ASSOCIATION 19416921 Bipolar disorder 5.15490195999 TLE3 - UACA LEAD_SNP rs12899618 chr15 71645120 Intron 6 ASSOCIATION 20010834 Pulmonary function 14.15490196 THSD4 FUNCTIONAL_SNP rs4777385 chr15 71702710 Intron 4 57590 CEU:1.0;0.879, CHB:1.0;0.721, JPT:1.0;0.659 FUNCTIONAL_SNP rs2119568 chr15 71665824 Intron 5b 20704 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10518949 chr15 71628336 Intron 5b 16784 CEU:1.0;0.899, JPT:1.0;0.741 FUNCTIONAL_SNP rs1913768 chr15 71649544 Intron 5b 4424 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.847;0.718 FUNCTIONAL_SNP rs12102112 chr15 71655735 Intron 5b 10615 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.555 FUNCTIONAL_SNP rs12901896 chr15 71702265 Intron 6 57145 CEU:1.0;0.899, CHB:1.0;0.721, JPT:1.0;0.659 FUNCTIONAL_SNP rs12101445 chr15 71651611 Intron 6 6491 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.845;0.619 FUNCTIONAL_SNP rs1372215 chr15 71655420 Intron 6 10300 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4777384 chr15 71702619 Intron 6 57499 CEU:1.0;0.899, CHB:1.0;0.721, JPT:1.0;0.659 FUNCTIONAL_SNP rs4545769 chr15 71703643 Intron 6 58523 CEU:1.0;0.899, CHB:1.0;0.632 FUNCTIONAL_SNP rs12441227 chr15 71696886 Intron 7 51766 CEU:1.0;0.899, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs12907830 chr15 71651681 Intron 7 6561 CEU:1.0;0.89, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12908092 chr15 71672753 Intron 7 27633 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12898444 chr15 71608305 Intron 7 36815 CEU:1.0;0.879 FUNCTIONAL_SNP rs7170506 chr15 71676235 Intron 7 31115 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7172574 chr15 71701452 Intron 7 56332 CEU:1.0;0.899, CHB:0.804;0.646, JPT:1.0;1.0 FUNCTIONAL_SNP rs7172592 chr15 71701477 Intron 7 56357 CEU:1.0;0.89, CHB:0.893;0.721, JPT:1.0;1.0 FUNCTIONAL_SNP rs12902263 chr15 71642054 Intron 7 3066 CEU:1.0;1.0, CHB:1.0;0.546, JPT:1.0;0.659, YRI:1.0;1.0 FUNCTIONAL_SNP rs12101372 chr15 71653912 Intron 7 8792 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.847;0.718 LEAD_SNP rs1038094 chr15 74012437 Intergenic 5b ASSOCIATION 21738484 Bipolar disorder 5.04575749056 CD276 - C15orf59 FUNCTIONAL_SNP rs1542544 chr15 74020740 Intergenic 5b 8303 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.952, YRI:1.0;0.786 FUNCTIONAL_SNP rs4887114 chr15 74029846 Intergenic 5b 17409 CEU:1.0;1.0, CHB:0.947;0.898, JPT:1.0;0.907, YRI:1.0;0.652 FUNCTIONAL_SNP rs896599 chr15 74039548 Intron 5b 27111 CEU:1.0;0.847, CHB:0.947;0.898, JPT:1.0;0.909, YRI:0.946;0.607 FUNCTIONAL_SNP rs922457 chr15 74014212 Intergenic 5b 1775 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.909, YRI:1.0;1.0 FUNCTIONAL_SNP rs1351161 chr15 74016903 Intergenic 5b 4466 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.909, YRI:1.0;0.953 FUNCTIONAL_SNP rs1871229 chr15 74014652 Intergenic 5b 2215 CEU:1.0;0.847 FUNCTIONAL_SNP rs12917099 chr15 74028569 Intergenic 6 16132 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.909, YRI:1.0;0.652 FUNCTIONAL_SNP rs2279155 chr15 74023137 Intergenic 6 10700 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.909, YRI:1.0;0.912 FUNCTIONAL_SNP rs2279154 chr15 74023017 Intergenic 7 10580 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.909, YRI:1.0;0.912 LEAD_SNP rs3825942 chr15 74219582 Coding 2b ASSOCIATION 17690259 Glaucoma (exfoliation) 20.5228787453 LOXL1 FUNCTIONAL_SNP rs1078967 chr15 74222987 Intron 5b 3405 CEU:1.0;1.0, CHB:1.0;0.887, JPT:1.0;1.0, YRI:1.0;0.962 LEAD_SNP rs893817 chr15 74229065 Intron 4 ASSOCIATION 19584346 Aortic root size 5.52287874528 LOXL1 FUNCTIONAL_SNP rs2028387 chr15 74227037 Intron 2b 2028 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4077284 chr15 74228391 Intron 5b 674 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs1992314 chr15 74223767 Intron 5b 5298 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs4886776 chr15 74224996 Intron 5b 4069 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs893816 chr15 74228464 Intron 5b 601 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs893818 chr15 74229195 Intron 5b 130 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs893820 chr15 74229603 Intron 5b 538 CEU:1.0;0.849 LEAD_SNP rs5742915 chr15 74336633 Coding 5b ASSOCIATION 21623375 Paget's disease 13.6989700043 PML ASSOCIATION 20881960 Height 6.30102999566 PML LEAD_SNP rs2470893 chr15 75019449 Intergenic 4 ASSOCIATION 21490707 Caffeine consumption 13.3010299957 CYP1A1 LEAD_SNP rs2472297 chr15 75027880 Intergenic 4 ASSOCIATION 21357676 Coffee consumption 13.3010299957 CYP1A1 - CYP1A2 LEAD_SNP rs2472299 chr15 75033400 Intergenic 6 ASSOCIATION 21378988 Coronary heart disease 5.52287874528 CYP1A1 - CYP1A2 FUNCTIONAL_SNP rs2470890 chr15 75047426 Coding 6 14026 CEU:1.0;0.8 FUNCTIONAL_SNP rs7085 chr15 75095483 Exon,non-coding 4 62083 CEU:0.95;0.821, CHB:0.874;0.594, JPT:0.864;0.504, YRI:0.919;0.783 FUNCTIONAL_SNP rs1543927 chr15 75063573 Intergenic 2a 30173 CEU:0.952;0.864, CHB:0.893;0.798, JPT:0.892;0.756, YRI:0.92;0.785 FUNCTIONAL_SNP rs936226 chr15 75069282 Intergenic 2b 35882 CEU:0.95;0.821, CHB:0.886;0.708, JPT:0.889;0.714, YRI:0.884;0.753 FUNCTIONAL_SNP rs2301249 chr15 75092384 Intron 2b 58984 CEU:0.95;0.821, CHB:0.874;0.594, JPT:0.864;0.504, YRI:0.884;0.753 FUNCTIONAL_SNP rs4886629 chr15 75072558 Intergenic 2b 39158 CEU:0.95;0.821, CHB:0.875;0.624, JPT:0.864;0.504 FUNCTIONAL_SNP rs11854147 chr15 75052771 Intergenic 4 19371 CEU:0.951;0.862 FUNCTIONAL_SNP rs2168519 chr15 75080872 Intron 4 47472 CEU:0.95;0.821, CHB:0.878;0.629, JPT:0.864;0.504 FUNCTIONAL_SNP rs8033381 chr15 75080685 Intron 4 47285 CEU:0.95;0.821, CHB:0.878;0.629, JPT:0.864;0.504, YRI:0.881;0.72 FUNCTIONAL_SNP rs2472300 chr15 75033909 Intergenic 5a 509 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4886406 chr15 75057203 Intergenic 5b 23803 CEU:0.952;0.864, CHB:0.89;0.752, JPT:0.945;0.807, YRI:0.924;0.822 FUNCTIONAL_SNP rs11634474 chr15 75116184 Intron 5b 82784 CEU:0.945;0.805, CHB:0.874;0.594, JPT:0.866;0.527, YRI:0.863;0.657 FUNCTIONAL_SNP rs762551 chr15 75041917 Intron 5b 8517 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2472304 chr15 75044238 Intron 5b 10838 CEU:1.0;0.8 FUNCTIONAL_SNP rs1378938 chr15 75096443 Intergenic 7 63043 CEU:0.95;0.821, CHB:0.874;0.594 LEAD_SNP rs2472304 chr15 75044238 Intron 5b ASSOCIATION 21490707 Caffeine consumption 6.52287874528 CYP1A2 FUNCTIONAL_SNP rs2470890 chr15 75047426 Coding 6 3188 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3784789 chr15 75082552 Intron 2a 38314 CEU:0.953;0.868, CHB:1.0;0.694, JPT:0.92;0.785 FUNCTIONAL_SNP rs1378941 chr15 75080150 Intron 2b 35912 CEU:0.951;0.825, CHB:1.0;0.718, JPT:0.832;0.692 FUNCTIONAL_SNP rs11854147 chr15 75052771 Intergenic 4 8533 CEU:1.0;0.833 FUNCTIONAL_SNP rs2168518 chr15 75081078 Intron 4 36840 CEU:0.954;0.834, CHB:1.0;0.694, JPT:0.92;0.785 FUNCTIONAL_SNP rs1378942 chr15 75077367 Intron 4 33129 CEU:0.954;0.834, CHB:1.0;0.694, JPT:0.92;0.785 FUNCTIONAL_SNP rs2472300 chr15 75033909 Intergenic 5a 10329 CEU:1.0;0.8 FUNCTIONAL_SNP rs11072508 chr15 75062397 Intergenic 5b 18159 CEU:0.951;0.825, CHB:1.0;0.619, JPT:0.905;0.643 FUNCTIONAL_SNP rs762551 chr15 75041917 Intron 5b 2321 CEU:1.0;0.8 FUNCTIONAL_SNP rs2472299 chr15 75033400 Intergenic 6 10838 CEU:1.0;0.8 FUNCTIONAL_SNP rs1378940 chr15 75083494 Intron 6 39256 CEU:0.953;0.832, CHB:0.885;0.591, JPT:0.915;0.774 FUNCTIONAL_SNP rs4886410 chr15 75065644 Intergenic 7 21406 CEU:0.954;0.834, CHB:1.0;0.694, JPT:0.92;0.785 LEAD_SNP rs1378942 chr15 75077367 Intron 4 ASSOCIATION 19430483 Diastolic blood pressure 23.0 CSK FUNCTIONAL_SNP rs2470890 chr15 75047426 Coding 6 29941 CEU:0.954;0.834, CHB:1.0;0.694, JPT:0.92;0.785 FUNCTIONAL_SNP rs3784789 chr15 75082552 Intron 2a 5185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1378941 chr15 75080150 Intron 2b 2783 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.923 FUNCTIONAL_SNP rs2168518 chr15 75081078 Intron 4 3711 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11072508 chr15 75062397 Intergenic 5b 14970 CEU:0.953;0.908, CHB:1.0;0.919, JPT:1.0;0.854 FUNCTIONAL_SNP rs11636952 chr15 75114322 Intron 5b 36955 CEU:1.0;0.957 FUNCTIONAL_SNP rs2472304 chr15 75044238 Intron 5b 33129 CEU:0.954;0.834, CHB:1.0;0.694, JPT:0.92;0.785 FUNCTIONAL_SNP rs1378940 chr15 75083494 Intron 6 6127 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;1.0 FUNCTIONAL_SNP rs4886410 chr15 75065644 Intergenic 7 11723 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3765066 chr15 75140854 Intron 7 63487 CEU:0.954;0.834 LEAD_SNP rs6495122 chr15 75125645 Intergenic 5b ASSOCIATION 21490707 Caffeine consumption 6.22184874962 CPLX3 - ULK3 ASSOCIATION 19430479 Diastolic blood pressure 9.69897000434 CPLX3 - ULK3 FUNCTIONAL_SNP rs1130741 chr15 75189930 Coding 4 64285 CEU:1.0;0.886, JPT:1.0;0.644 FUNCTIONAL_SNP rs1133322 chr15 75212357 Exon,non-coding 6 86712 CEU:1.0;0.853, JPT:0.851;0.676 FUNCTIONAL_SNP rs1133323 chr15 75212225 Exon,non-coding 6 86580 CEU:1.0;0.853, CHB:0.867;0.599, JPT:1.0;0.797 FUNCTIONAL_SNP rs12487 chr15 75136694 Exon,non-coding 4 11049 CEU:1.0;0.961, CHB:1.0;0.699 FUNCTIONAL_SNP rs1127796 chr15 75193004 Exon,non-coding 6 67359 CEU:1.0;0.887, JPT:0.851;0.676 FUNCTIONAL_SNP rs11638130 chr15 75183935 Intron 2a 58290 CEU:1.0;0.887, CHB:0.867;0.599, JPT:1.0;0.797 FUNCTIONAL_SNP rs11856413 chr15 75199892 Intergenic 2b 74247 CEU:1.0;0.887, CHB:0.867;0.599, JPT:1.0;0.797 FUNCTIONAL_SNP rs11072513 chr15 75220968 Intron 4 95323 CEU:1.0;0.853, CHB:0.867;0.599, JPT:0.918;0.726 FUNCTIONAL_SNP rs11854704 chr15 75221015 Intron 4 95370 CEU:1.0;0.853, JPT:0.851;0.676 FUNCTIONAL_SNP rs11633472 chr15 75184084 Intron 4 58439 CEU:1.0;0.887, CHB:0.867;0.599, JPT:1.0;0.797 FUNCTIONAL_SNP rs7495739 chr15 75185670 Intron 5a 60025 CEU:1.0;0.887, JPT:1.0;0.644 FUNCTIONAL_SNP rs11072511 chr15 75159433 Intron 5a 33788 CEU:0.958;0.847, JPT:1.0;0.644 FUNCTIONAL_SNP rs11072512 chr15 75204026 Intergenic 5b 78381 CEU:1.0;0.887, JPT:0.851;0.676 FUNCTIONAL_SNP rs11630918 chr15 75155896 Intron 5b 30251 CEU:1.0;0.923, CHB:0.894;0.8, JPT:1.0;0.93 FUNCTIONAL_SNP rs2290573 chr15 75129594 Intron 5b 3949 CEU:1.0;0.887, CHB:1.0;0.797, JPT:1.0;0.863 FUNCTIONAL_SNP rs4886636 chr15 75196176 Intron 5b 70531 CEU:0.958;0.847, JPT:1.0;0.639 FUNCTIONAL_SNP rs11072514 chr15 75221865 Intron 6 96220 CEU:1.0;0.853, CHB:0.867;0.599, JPT:1.0;0.797 FUNCTIONAL_SNP rs2415251 chr15 75242155 Intergenic 7 116510 CEU:0.956;0.81, JPT:1.0;0.671 FUNCTIONAL_SNP rs12901190 chr15 75231452 Intergenic 7 105807 CEU:1.0;0.853, CHB:0.867;0.599, JPT:1.0;0.797 FUNCTIONAL_SNP rs12909335 chr15 75214789 Intron 7 89144 CEU:1.0;0.853, CHB:0.867;0.599, JPT:1.0;0.797 FUNCTIONAL_SNP rs7497393 chr15 75175457 Intergenic 7 49812 CEU:1.0;0.884, CHB:0.894;0.8, JPT:0.929;0.862 LEAD_SNP rs12148488 chr15 75382542 Intergenic 7 ASSOCIATION 21490707 Caffeine consumption 6.22184874962 PPCDC - RPL36AP45 FUNCTIONAL_SNP rs7163636 chr15 75346760 Intergenic 4 35782 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.895 FUNCTIONAL_SNP rs8039755 chr15 75337426 Intron 5b 45116 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.94, YRI:1.0;0.893 FUNCTIONAL_SNP rs4886655 chr15 75385568 Intergenic 6 3026 CEU:1.0;0.855 FUNCTIONAL_SNP rs11854975 chr15 75363876 Intergenic 7 18666 CEU:1.0;0.855, JPT:1.0;0.513 LEAD_SNP rs8028182 chr15 75718669 Intron 4 ASSOCIATION 21658281 Sudden cardiac arrest 5.52287874528 SIN3A LEAD_SNP rs4886707 chr15 75755467 Intergenic 5a ASSOCIATION 20189936 Height 7.09691001301 RPL13P4 - PTPN9 FUNCTIONAL_SNP rs8029112 chr15 75808972 Intron 4 53505 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs4545784 chr15 75755651 Intergenic 5a 184 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs7163907 chr15 75845097 Intron 5b 89630 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.861 FUNCTIONAL_SNP rs10220738 chr15 75666546 Intron 6 88921 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:0.925;0.824 FUNCTIONAL_SNP rs8023815 chr15 75814704 Intron 6 59237 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs12708519 chr15 75803200 Intron 6 47733 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.857 FUNCTIONAL_SNP rs28610581 chr15 75812474 Intron 6 57007 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs4886716 chr15 75856022 Intron 7 100555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.896 FUNCTIONAL_SNP rs6495182 chr15 75814388 Intron 7 58921 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs8023268 chr15 75814672 Intron 7 59205 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs11636031 chr15 75815758 Intron 7 60291 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 LEAD_SNP rs1394125 chr15 76158983 Intron 7 ASSOCIATION 20383146 Chronic kidney disease 16.5228787453 UBE2Q2 LEAD_SNP rs7119 chr15 77777632 Exon,non-coding 7 ASSOCIATION 21490949 Type 2 diabetes 6.30102999566 HMG20A LEAD_SNP rs9652490 chr15 77963887 Intergenic 2b ASSOCIATION 19182806 Essential tremor 9.0 LINGO1 - DNM1P9 FUNCTIONAL_SNP rs7177008 chr15 77965200 Intergenic 5b 1313 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs13313467 chr15 77966168 Intergenic 5b 2281 CEU:1.0;1.0, CHB:1.0;0.898, JPT:1.0;1.0, YRI:0.962;0.86 LEAD_SNP rs1533665 chr15 78530940 Intergenic 6 ASSOCIATION 20691247 Personality dimensions 5.15490195999 ACSBG1 - DNAJA4 LEAD_SNP rs13180 chr15 78789488 Coding 6 ASSOCIATION 20173748 Chronic obstructive pulmonary disease 7.69897000434 IREB2 FUNCTIONAL_SNP rs1062980 chr15 78792527 Exon,non-coding 6 3039 CEU:1.0;1.0, CHB:1.0;0.682, JPT:1.0;0.556 FUNCTIONAL_SNP rs12904234 chr15 78779384 Intron 4 10104 CEU:1.0;1.0, CHB:1.0;0.689, JPT:1.0;0.583, YRI:1.0;0.559 FUNCTIONAL_SNP rs1964678 chr15 78754000 Intron 5b 35488 CEU:1.0;1.0, CHB:1.0;0.866, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs12910910 chr15 78767850 Intron 6 21638 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12903295 chr15 78778972 Intron 6 10516 CEU:1.0;1.0, CHB:1.0;0.655, JPT:1.0;0.538, YRI:1.0;0.503 FUNCTIONAL_SNP rs8042260 chr15 78774374 Intron 7 15114 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8043227 chr15 78768871 Intron 7 20617 CEU:1.0;1.0, CHB:1.0;0.909, JPT:1.0;1.0, YRI:1.0;0.943 FUNCTIONAL_SNP rs965604 chr15 78789223 Intron 7 265 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4299116 chr15 78766194 Intron 7 23294 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4362358 chr15 78796104 Intergenic 7 6616 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8042238 chr15 78774271 Intron 7 15217 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8034191 chr15 78806023 Intron 7 ASSOCIATION 19654303 Lung cancer 25.5228787453 AGPHD1 ASSOCIATION 19300482 Chronic obstructive pulmonary disease 10.0 AGPHD1 ASSOCIATION 18780872 Lung cancer 8.0 AGPHD1 ASSOCIATION 18385676 Lung cancer 17.5228787453 AGPHD1 ASSOCIATION 18385738 Lung cancer 19.3010299957 AGPHD1 FUNCTIONAL_SNP rs8040868 chr15 78911181 Coding 4 105158 CEU:0.958;0.849 FUNCTIONAL_SNP rs1051730 chr15 78894339 Coding 6 88316 CEU:1.0;0.961, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs16969968 chr15 78882925 Coding 5b 76902 CEU:1.0;0.961, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs17486278 chr15 78867482 Intron 2b 61459 CEU:1.0;0.958 FUNCTIONAL_SNP rs7181486 chr15 78741618 Intron 4 64405 CEU:0.958;0.848, YRI:0.838;0.566 FUNCTIONAL_SNP rs17483548 chr15 78730313 Intergenic 4 75710 CEU:0.958;0.848, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17405217 chr15 78731149 Intron 4 74874 CEU:0.958;0.848, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2009746 chr15 78754102 Intron 5b 51921 CEU:0.956;0.842 FUNCTIONAL_SNP rs2036527 chr15 78851615 Intergenic 5b 45592 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2656052 chr15 78740932 Intron 5b 65091 CEU:0.958;0.848 FUNCTIONAL_SNP rs2568494 chr15 78740964 Intron 5b 65059 CEU:0.958;0.848 FUNCTIONAL_SNP rs17487223 chr15 78923987 Intron 5b 117964 CEU:0.92;0.847, CHB:1.0;0.741 FUNCTIONAL_SNP rs17483929 chr15 78742376 Intron 6 63647 CEU:0.958;0.848, YRI:0.836;0.564 FUNCTIONAL_SNP rs10519203 chr15 78814046 Intron 6 8023 CEU:1.0;1.0 FUNCTIONAL_SNP rs9788721 chr15 78802869 Intron 6 3154 CEU:1.0;1.0 FUNCTIONAL_SNP rs17483721 chr15 78733731 Intron 6 72292 CEU:0.958;0.848, YRI:0.838;0.566 FUNCTIONAL_SNP rs2656065 chr15 78750549 Intron 6 55474 CEU:0.956;0.841 FUNCTIONAL_SNP rs12914385 chr15 78898723 Intron 6 92700 CEU:0.959;0.885 FUNCTIONAL_SNP rs951266 chr15 78878541 Intron 6 72518 CEU:1.0;0.961, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs1317286 chr15 78896129 Intron 6 90106 CEU:1.0;0.96 FUNCTIONAL_SNP rs17484524 chr15 78772676 Intron 6 33347 CEU:0.956;0.842, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1504550 chr15 78766250 Intron 7 39773 CEU:0.958;0.848, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17484235 chr15 78761414 Intron 7 44609 CEU:0.958;0.848, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8031948 chr15 78816057 Intron 7 10034 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7180002 chr15 78873993 Intron 7 67970 CEU:1.0;0.961, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs931794 chr15 78826180 Intron 7 20157 CEU:1.0;1.0 LEAD_SNP rs28675338 chr15 78827631 Intron 6 ASSOCIATION 21685187 Chronic obstructive pulmonary disease 7.0 AGPHD1 LEAD_SNP rs1051730 chr15 78894339 Coding 6 ASSOCIATION 20418889 Smoking behavior 65.6989700043 CHRNA3 ASSOCIATION 20418890 Smoking behavior 72.5228787453 CHRNA3 ASSOCIATION 20418888 Smoking behavior 68.6989700043 CHRNA3 ASSOCIATION 19836008 Lung adenocarcinoma 50.6989700043 CHRNA3 ASSOCIATION 18978790 Lung cancer 15.0 CHRNA3 ASSOCIATION 18385739 Nicotine dependence 19.2218487496 CHRNA3 FUNCTIONAL_SNP rs8040868 chr15 78911181 Coding 4 16842 CEU:1.0;0.888 FUNCTIONAL_SNP rs16969968 chr15 78882925 Coding 5b 11414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17486278 chr15 78867482 Intron 2b 26857 CEU:1.0;1.0 FUNCTIONAL_SNP rs17405217 chr15 78731149 Intron 4 163190 CEU:0.918;0.809, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs17483548 chr15 78730313 Intergenic 4 164026 CEU:0.918;0.809, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs7181486 chr15 78741618 Intron 4 152721 CEU:0.918;0.809 FUNCTIONAL_SNP rs2009746 chr15 78754102 Intron 5b 140237 CEU:0.914;0.802 FUNCTIONAL_SNP rs2568494 chr15 78740964 Intron 5b 153375 CEU:0.918;0.809 FUNCTIONAL_SNP rs2036527 chr15 78851615 Intergenic 5b 42724 CEU:1.0;0.961, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs2656052 chr15 78740932 Intron 5b 153407 CEU:0.918;0.809 FUNCTIONAL_SNP rs17487223 chr15 78923987 Intron 5b 29648 CEU:0.918;0.81, CHB:1.0;1.0 FUNCTIONAL_SNP rs17483929 chr15 78742376 Intron 6 151963 CEU:0.918;0.809 FUNCTIONAL_SNP rs10519203 chr15 78814046 Intron 6 80293 CEU:1.0;0.961 FUNCTIONAL_SNP rs9788721 chr15 78802869 Intron 6 91470 CEU:1.0;0.961 FUNCTIONAL_SNP rs17483721 chr15 78733731 Intron 6 160608 CEU:0.918;0.809 FUNCTIONAL_SNP rs2656065 chr15 78750549 Intron 6 143790 CEU:0.914;0.8 FUNCTIONAL_SNP rs12914385 chr15 78898723 Intron 6 4384 CEU:1.0;0.924 FUNCTIONAL_SNP rs951266 chr15 78878541 Intron 6 15798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1317286 chr15 78896129 Intron 6 1790 CEU:1.0;1.0 FUNCTIONAL_SNP rs17484524 chr15 78772676 Intron 6 121663 CEU:0.914;0.802, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs17484235 chr15 78761414 Intron 7 132925 CEU:0.918;0.809, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs1504550 chr15 78766250 Intron 7 128089 CEU:0.918;0.809, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs8031948 chr15 78816057 Intron 7 78282 CEU:1.0;0.96, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs7180002 chr15 78873993 Intron 7 20346 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs931794 chr15 78826180 Intron 7 68159 CEU:1.0;0.961 FUNCTIONAL_SNP rs8034191 chr15 78806023 Intron 7 88316 CEU:1.0;0.961, CHB:1.0;0.741, JPT:1.0;1.0 LEAD_SNP rs8042374 chr15 78908032 Intron 7 ASSOCIATION 18978787 Lung cancer 11.096910013 CHRNA3 FUNCTIONAL_SNP rs4887069 chr15 78909070 Intron 5b 1038 CEU:0.94;0.883, CHB:1.0;1.0, JPT:1.0;0.816, YRI:1.0;1.0 FUNCTIONAL_SNP rs6495308 chr15 78907656 Intron 5b 376 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.816, YRI:1.0;1.0 FUNCTIONAL_SNP rs7177514 chr15 78907406 Intron 5b 626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.816, YRI:1.0;1.0 FUNCTIONAL_SNP rs8042059 chr15 78907859 Intron 7 173 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.816, YRI:1.0;1.0 LEAD_SNP rs950776 chr15 78926018 Intron 4 ASSOCIATION 21658281 Sudden cardiac arrest 6.39794000867 CHRNB4 LEAD_SNP rs1994016 chr15 79080234 Intron 7 ASSOCIATION 21239051 Cardiovascular disease risk factors 12.3010299957 ADAMTS7 FUNCTIONAL_SNP rs3825807 chr15 79089111 Coding 5b 8877 CEU:1.0;0.888, CHB:1.0;0.877, JPT:1.0;0.601, YRI:0.847;0.718 FUNCTIONAL_SNP rs11634042 chr15 79105350 Intron 2b 25116 CEU:0.958;0.847, CHB:1.0;0.877, JPT:1.0;0.601 FUNCTIONAL_SNP rs11639044 chr15 79083814 Intron 5b 3580 CEU:1.0;0.853 FUNCTIONAL_SNP rs12899147 chr15 79079512 Intron 5b 722 CEU:1.0;0.888, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.762 FUNCTIONAL_SNP rs2277545 chr15 79083591 Intron 6 3357 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12903203 chr15 79084933 Intron 7 4699 CEU:1.0;0.888, CHB:1.0;1.0, JPT:1.0;0.822 FUNCTIONAL_SNP rs7177699 chr15 79089734 Intron 7 9500 CEU:1.0;0.885, CHB:1.0;0.877, JPT:1.0;0.549, YRI:1.0;0.825 LEAD_SNP rs3825807 chr15 79089111 Coding 5b ASSOCIATION 21378990 Coronary heart disease 12.0 ADAMTS7 FUNCTIONAL_SNP rs11634042 chr15 79105350 Intron 2b 16239 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11639044 chr15 79083814 Intron 5b 5297 CEU:1.0;0.961 FUNCTIONAL_SNP rs12899147 chr15 79079512 Intron 5b 9599 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.601, YRI:0.844;0.543 FUNCTIONAL_SNP rs2277545 chr15 79083591 Intron 6 5520 CEU:1.0;1.0, CHB:1.0;0.889, JPT:1.0;0.602, YRI:0.848;0.719 FUNCTIONAL_SNP rs1994016 chr15 79080234 Intron 7 8877 CEU:1.0;0.888, CHB:1.0;0.877, JPT:1.0;0.601, YRI:0.847;0.718 FUNCTIONAL_SNP rs12903203 chr15 79084933 Intron 7 4178 CEU:1.0;1.0, CHB:1.0;0.877, JPT:0.832;0.523 FUNCTIONAL_SNP rs7177699 chr15 79089734 Intron 7 623 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4380028 chr15 79111093 Intron 6 ASSOCIATION 21378988 Coronary heart disease 8.39794000867 ADAMTS7 - RPL21P116 FUNCTIONAL_SNP rs7178051 chr15 79118296 Intron 4 7203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7182103 chr15 79123946 Intron 5b 12853 CEU:1.0;0.92, CHB:1.0;0.82, JPT:1.0;0.593 FUNCTIONAL_SNP rs10083696 chr15 79124016 Intron 5b 12923 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.869, YRI:1.0;1.0 FUNCTIONAL_SNP rs4468572 chr15 79124475 Intron 5b 13382 CEU:1.0;0.923, CHB:1.0;0.786, JPT:1.0;0.609 FUNCTIONAL_SNP rs8026598 chr15 79112938 Intron 5b 1845 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs7181432 chr15 79123779 Intron 5b 12686 CEU:1.0;0.918, CHB:1.0;0.82, JPT:1.0;0.589 FUNCTIONAL_SNP rs7176187 chr15 79121373 Intron 5b 10280 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs7182716 chr15 79123753 Intron 5b 12660 CEU:1.0;0.918, CHB:1.0;0.854, JPT:1.0;0.568 FUNCTIONAL_SNP rs7165902 chr15 79115872 Intron 6 4779 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs6495335 chr15 79117133 Intron 6 6040 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs9806363 chr15 79110302 Intron 7 791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8027833 chr15 79112837 Intron 7 1744 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs6495333 chr15 79113215 Intron 7 2122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.532 FUNCTIONAL_SNP rs3971829 chr15 79109052 Intron 7 2041 CEU:1.0;1.0 LEAD_SNP rs3825932 chr15 79235446 Intron 5b ASSOCIATION 19430480 Type 1 diabetes 7.09691001301 CTSH ASSOCIATION 18978792 Type 1 diabetes 14.5228787453 CTSH LEAD_SNP rs3743200 chr15 79274046 Intron 5b ASSOCIATION 20031603 RR interval (heart rate) 5.69897000434 RASGRF1 FUNCTIONAL_SNP rs3825928 chr15 79273889 Intron 2b 157 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7173329 chr15 79270451 Intron 2b 3595 CEU:1.0;0.809, CHB:1.0;0.642, JPT:1.0;0.5 FUNCTIONAL_SNP rs2278650 chr15 79273098 Intron 5b 948 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3743198 chr15 79273985 Intron 5b 61 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3743201 chr15 79274253 Intron 7 207 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7175835 chr15 79266998 Intron 7 7048 CEU:1.0;0.851, CHB:1.0;0.789, JPT:1.0;0.657 FUNCTIONAL_SNP rs7168964 chr15 79274691 Intron 7 645 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8036107 chr15 79276226 Intron 7 2180 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7174399 chr15 79266735 Intron 7 7311 CEU:1.0;0.944, CHB:1.0;0.789, JPT:1.0;0.657 FUNCTIONAL_SNP rs8026710 chr15 79268798 Intron 7 5248 CEU:1.0;1.0, CHB:1.0;0.789, JPT:1.0;0.766, YRI:1.0;0.802 FUNCTIONAL_SNP rs6495356 chr15 79276379 Intron 7 2333 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3743197 chr15 79270864 Intron 7 3182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs939658 chr15 79451869 Intergenic 7 ASSOCIATION 20835236 Refractive error 8.69897000434 RASGRF1 - ANKRD34C FUNCTIONAL_SNP rs11072826 chr15 79461516 Intergenic 4 9647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.95;0.859 FUNCTIONAL_SNP rs2204069 chr15 79449335 Intergenic 5a 2534 CEU:1.0;0.963, CHB:1.0;1.0, JPT:1.0;0.955 FUNCTIONAL_SNP rs12903747 chr15 79449627 Intergenic 5b 2242 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.72 FUNCTIONAL_SNP rs17175798 chr15 79463960 Intergenic 5b 12091 CEU:1.0;1.0, CHB:1.0;0.954, JPT:0.951;0.905 FUNCTIONAL_SNP rs939661 chr15 79431063 Intergenic 6 20806 CEU:0.918;0.809, CHB:1.0;0.909, JPT:1.0;0.783 FUNCTIONAL_SNP rs4778924 chr15 79443363 Intergenic 6 8506 CEU:0.922;0.818, CHB:1.0;0.864, JPT:0.94;0.722 FUNCTIONAL_SNP rs8033963 chr15 79455350 Intergenic 6 3481 CEU:1.0;0.963, CHB:1.0;1.0, JPT:0.952;0.907, YRI:1.0;0.737 FUNCTIONAL_SNP rs11629665 chr15 79457133 Intergenic 6 5264 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.951;0.905, YRI:1.0;0.72 FUNCTIONAL_SNP rs8035606 chr15 79420245 Intergenic 7 31624 CEU:0.918;0.809, CHB:1.0;0.867, JPT:1.0;0.783 FUNCTIONAL_SNP rs8031019 chr15 79458512 Intergenic 7 6643 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.951;0.905, YRI:0.96;0.795 FUNCTIONAL_SNP rs11634903 chr15 79436192 Intergenic 7 15677 CEU:0.918;0.809, CHB:1.0;0.867, JPT:1.0;0.783 FUNCTIONAL_SNP rs8031504 chr15 79458589 Intergenic 7 6720 CEU:1.0;0.963, CHB:1.0;1.0, JPT:0.953;0.909, YRI:1.0;0.641 FUNCTIONAL_SNP rs8027411 chr15 79461029 Intergenic 7 9160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.951;0.905, YRI:0.873;0.612 FUNCTIONAL_SNP rs4778651 chr15 79447810 Intergenic 7 4059 CEU:1.0;0.961, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs11635757 chr15 79432737 Intergenic 7 19132 CEU:0.908;0.825, CHB:1.0;0.852, JPT:1.0;0.893 FUNCTIONAL_SNP rs12902831 chr15 79433171 Intergenic 7 18698 CEU:0.923;0.821, CHB:1.0;0.871, JPT:1.0;0.795 FUNCTIONAL_SNP rs11638625 chr15 79434787 Intergenic 7 17082 CEU:0.923;0.821, CHB:1.0;0.871, JPT:1.0;0.795 FUNCTIONAL_SNP rs1915726 chr15 79420620 Intergenic 7 31249 CEU:0.923;0.821, CHB:1.0;0.831, JPT:1.0;0.795 FUNCTIONAL_SNP rs11631411 chr15 79445816 Intergenic 7 6053 CEU:0.906;0.822, CHB:1.0;0.895, JPT:0.932;0.661 FUNCTIONAL_SNP rs12439908 chr15 79456381 Intergenic 7 4512 CEU:1.0;0.958, CHB:1.0;1.0, JPT:0.951;0.905, YRI:1.0;0.755 FUNCTIONAL_SNP rs11630571 chr15 79432992 Intergenic 7 18877 CEU:0.923;0.821, CHB:1.0;0.871, JPT:1.0;0.795 FUNCTIONAL_SNP rs8024813 chr15 79427260 Intergenic 7 24609 CEU:0.956;0.876, CHB:0.885;0.706, JPT:1.0;0.839 FUNCTIONAL_SNP rs11634679 chr15 79432475 Intergenic 7 19394 CEU:0.923;0.821, CHB:1.0;0.871, JPT:1.0;0.826 LEAD_SNP rs11634397 chr15 80432222 Intergenic 7 ASSOCIATION 20581827 Type 2 diabetes 8.69897000434 ZFAND6 - FAH FUNCTIONAL_SNP rs2866367 chr15 80365745 Intron 4 66477 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.514 FUNCTIONAL_SNP rs10851925 chr15 80398898 Intron 5a 33324 CEU:0.919;0.844, CHB:1.0;1.0, JPT:1.0;0.777 FUNCTIONAL_SNP rs4778582 chr15 80420966 Intron 5a 11256 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11072881 chr15 80400892 Intron 5a 31330 CEU:0.919;0.844, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1357335 chr15 80368863 Intron 5b 63359 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs870185 chr15 80391257 Intron 6 40965 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.863, YRI:0.961;0.924 FUNCTIONAL_SNP rs2103043 chr15 80426083 Intron 7 6139 CEU:1.0;0.884, YRI:1.0;0.747 FUNCTIONAL_SNP rs12441266 chr15 80405656 Intron 7 26566 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs939974 chr15 80383081 Intron 7 49141 CEU:0.919;0.844, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2461639 chr15 80368156 Intron 7 64066 CEU:0.919;0.844, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs12911387 chr15 80403126 Intron 7 29096 CEU:0.919;0.844, CHB:1.0;1.0, JPT:1.0;0.877 LEAD_SNP rs2278702 chr15 80694922 Intergenic 5b ASSOCIATION 18711365 Bipolar disorder 5.22184874962 ARNT2 LEAD_SNP rs7172689 chr15 81533695 Intron 7 ASSOCIATION 18821565 Inattentive symptoms 5.39794000867 IL16 FUNCTIONAL_SNP rs7179134 chr15 81533378 Intron 3b 317 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7180245 chr15 81535149 Intron 5a 1454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6495554 chr15 81548381 Intron 5b 14686 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs6495555 chr15 81548587 Intron 5b 14892 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.967 FUNCTIONAL_SNP rs11072995 chr15 81527032 Intron 6 6663 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11072997 chr15 81529635 Intron 6 4060 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11856780 chr15 81529923 Intron 7 3772 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.933 FUNCTIONAL_SNP rs7163931 chr15 81551842 Intron 7 18147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.86 FUNCTIONAL_SNP rs11638444 chr15 81534820 Intron 7 1125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs12324786 chr15 81526302 Intron 7 7393 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs11636298 chr15 81537612 Intron 7 3917 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11853619 chr15 81530037 Intron 7 3658 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 LEAD_SNP rs12324805 chr15 82352200 Intergenic 7 ASSOCIATION 19079261 Body mass index 5.15490195999 MEX3B - EFTUD1 LEAD_SNP rs783540 chr15 83254708 Intron 6 ASSOCIATION 20062064 Chronic lymphocytic leukemia 5.39794000867 CPEB1 FUNCTIONAL_SNP rs1267657 chr15 83215251 Coding 6 39457 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.952;0.906, YRI:1.0;1.0 FUNCTIONAL_SNP rs8043401 chr15 83356259 Exon,non-coding 6 101551 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;0.953, YRI:0.913;0.643 FUNCTIONAL_SNP rs11631963 chr15 83318202 Intergenic 2b 63494 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.866 FUNCTIONAL_SNP rs783539 chr15 83254070 Intron 2b 638 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4779050 chr15 83368738 Intron 4 114030 CEU:1.0;0.918, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs9652567 chr15 83368514 Intron 4 113806 CEU:1.0;0.901, CHB:1.0;0.942, JPT:1.0;0.946 FUNCTIONAL_SNP rs783521 chr15 83280445 Intron 5a 25737 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs783529 chr15 83267981 Intron 5a 13273 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs2567635 chr15 83262181 Intron 5a 7473 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4778686 chr15 83310835 Intron 5a 56127 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs2099259 chr15 83323688 Intergenic 5b 68980 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs1267659 chr15 83213963 Intron 5b 40745 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.952;0.906, YRI:1.0;0.964 FUNCTIONAL_SNP rs7494860 chr15 83334419 Intron 5b 79711 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs1145173 chr15 83223425 Intron 5b 31283 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.775 FUNCTIONAL_SNP rs10906984 chr15 83366296 Intron 5b 111588 CEU:1.0;0.918, CHB:1.0;0.954, JPT:1.0;0.953, YRI:0.95;0.54 FUNCTIONAL_SNP rs2278355 chr15 83331155 Intron 5b 76447 CEU:1.0;0.959, CHB:1.0;0.909, JPT:0.947;0.777 FUNCTIONAL_SNP rs1864699 chr15 83323318 Intergenic 5b 68610 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs698500 chr15 83237769 Intron 6 16939 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10400906 chr15 83297138 Intron 6 42430 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.747 FUNCTIONAL_SNP rs6603033 chr15 83335875 Intron 6 81167 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:0.915;0.649 FUNCTIONAL_SNP rs783523 chr15 83283555 Intron 6 28847 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs783526 chr15 83285795 Intron 6 31087 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;0.898, YRI:1.0;1.0 FUNCTIONAL_SNP rs783527 chr15 83285847 Intron 6 31139 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs1145172 chr15 83223616 Intron 6 31092 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.775 FUNCTIONAL_SNP rs11855735 chr15 83296545 Intron 6 41837 CEU:0.957;0.878, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.694 FUNCTIONAL_SNP rs1594511 chr15 83307063 Intron 7 52355 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.72 FUNCTIONAL_SNP rs783525 chr15 83284629 Intron 7 29921 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.735 FUNCTIONAL_SNP rs7167880 chr15 83294436 Intron 7 39728 CEU:0.958;0.881, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.747 FUNCTIONAL_SNP rs2870966 chr15 83295244 Intron 7 40536 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.716 FUNCTIONAL_SNP rs11637433 chr15 83321336 Intergenic 7 66628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:0.911;0.598 FUNCTIONAL_SNP rs803747 chr15 83258096 Intron 7 3388 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12916980 chr15 83306447 Intron 7 51739 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.534 FUNCTIONAL_SNP rs2567636 chr15 83263428 Intron 7 8720 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs1568657 chr15 83726179 Intron 5a ASSOCIATION 21326860 Kawasaki disease 5.15490195999 BTBD1 LEAD_SNP rs2562784 chr15 84286492 Intron 7 ASSOCIATION 18391950 Height 7.22184874962 SH3GL3 LEAD_SNP rs2554380 chr15 84315884 Intergenic 5a ASSOCIATION 18391951 Height 6.04575749056 SH3GL3 - ADAMTSL3 FUNCTIONAL_SNP rs1477593 chr15 84363045 Intron 2b 47161 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.822, YRI:1.0;1.0 FUNCTIONAL_SNP rs2730076 chr15 84315985 Intergenic 5a 101 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs2554383 chr15 84356316 Intron 5b 40432 CEU:1.0;0.937, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs2562777 chr15 84366066 Intron 5b 50182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs1896816 chr15 84299371 Intergenic 7 16513 CEU:1.0;0.92, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs2585052 chr15 84355990 Intron 7 40106 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs2562781 chr15 84312568 Intergenic 7 3316 CEU:1.0;0.937, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs2562782 chr15 84300081 Intergenic 7 15803 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;1.0 FUNCTIONAL_SNP rs1155070 chr15 84303084 Intergenic 7 12800 CEU:0.934;0.872, CHB:1.0;1.0, JPT:1.0;0.823, YRI:1.0;1.0 LEAD_SNP rs10906982 chr15 84568158 Intron 7 ASSOCIATION 20397748 Height 6.30102999566 ADAMTSL3 ASSOCIATION 18391952 Height 7.69897000434 ADAMTSL3 FUNCTIONAL_SNP rs4842838 chr15 84582124 Coding 2b 13966 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs4842923 chr15 84581904 Coding 6 13746 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs7183263 chr15 84573041 Intron 2b 4883 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259937 chr15 84587833 Intron 5a 19675 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs12914857 chr15 84581166 Intron 5a 13008 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4842924 chr15 84587607 Intron 5a 19449 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs11637866 chr15 84587958 Intron 5a 19800 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401171 chr15 84557676 Intron 5b 10482 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.857 FUNCTIONAL_SNP rs1564472 chr15 84569793 Intron 5b 1635 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.915;0.774, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259935 chr15 84580427 Intron 5b 12269 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259936 chr15 84580582 Intron 5b 12424 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs2030839 chr15 84583959 Intron 5b 15801 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs899926 chr15 84573491 Intron 5b 5333 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs6603004 chr15 84568504 Intron 5b 346 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs1480823 chr15 84585746 Intron 5b 17588 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs10520573 chr15 84591575 Intron 5b 23417 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs11633301 chr15 84585038 Intron 6 16880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs2055712 chr15 84581605 Intron 6 13447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs8030379 chr15 84590910 Intron 6 22752 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.922;0.85, YRI:1.0;1.0 FUNCTIONAL_SNP rs1852264 chr15 84589940 Intron 6 21782 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.921;0.848, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259933 chr15 84580156 Intron 6 11998 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401172 chr15 84576957 Intron 7 8799 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401174 chr15 84576992 Intron 7 8834 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401175 chr15 84578217 Intron 7 10059 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259929 chr15 84577202 Intron 7 9044 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs1880730 chr15 84584184 Intron 7 16026 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259930 chr15 84577350 Intron 7 9192 CEU:1.0;1.0, CHB:1.0;0.857, JPT:1.0;0.693, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259934 chr15 84580171 Intron 7 12013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;1.0 FUNCTIONAL_SNP rs2061999 chr15 84582740 Intron 7 14582 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs1526080 chr15 84589920 Intron 7 21762 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.922;0.85, YRI:1.0;1.0 FUNCTIONAL_SNP rs2135880 chr15 84589613 Intron 7 21455 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.922;0.85, YRI:1.0;1.0 FUNCTIONAL_SNP rs8029016 chr15 84586464 Intron 7 18306 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs7496814 chr15 84584959 Intron 7 16801 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs2046120 chr15 84567762 Intron 7 396 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs2030840 chr15 84584134 Intron 7 15976 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs1480827 chr15 84577792 Intron 7 9634 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401173 chr15 84576970 Intron 7 8812 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 LEAD_SNP rs7183263 chr15 84573041 Intron 2b ASSOCIATION 20397748 Height 6.39794000867 ADAMTSL3 FUNCTIONAL_SNP rs4842838 chr15 84582124 Coding 2b 9083 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4842923 chr15 84581904 Coding 6 8863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259937 chr15 84587833 Intron 5a 14792 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12914857 chr15 84581166 Intron 5a 8125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4842924 chr15 84587607 Intron 5a 14566 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11637866 chr15 84587958 Intron 5a 14917 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401171 chr15 84557676 Intron 5b 15365 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;0.856 FUNCTIONAL_SNP rs11259935 chr15 84580427 Intron 5b 7386 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1564472 chr15 84569793 Intron 5b 3248 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.918;0.842, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259936 chr15 84580582 Intron 5b 7541 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2030839 chr15 84583959 Intron 5b 10918 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs899926 chr15 84573491 Intron 5b 450 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6603004 chr15 84568504 Intron 5b 4537 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1480823 chr15 84585746 Intron 5b 12705 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10520573 chr15 84591575 Intron 5b 18534 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11633301 chr15 84585038 Intron 6 11997 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2055712 chr15 84581605 Intron 6 8564 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8030379 chr15 84590910 Intron 6 17869 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs1852264 chr15 84589940 Intron 6 16899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.923, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259933 chr15 84580156 Intron 6 7115 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401172 chr15 84576957 Intron 7 3916 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401174 chr15 84576992 Intron 7 3951 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401175 chr15 84578217 Intron 7 5176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259929 chr15 84577202 Intron 7 4161 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1880730 chr15 84584184 Intron 7 11143 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259930 chr15 84577350 Intron 7 4309 CEU:1.0;1.0, CHB:1.0;0.857, JPT:1.0;0.775, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259934 chr15 84580171 Intron 7 7130 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2061999 chr15 84582740 Intron 7 9699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1526080 chr15 84589920 Intron 7 16879 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs2135880 chr15 84589613 Intron 7 16572 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs8029016 chr15 84586464 Intron 7 13423 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10906982 chr15 84568158 Intron 7 4883 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs7496814 chr15 84584959 Intron 7 11918 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2046120 chr15 84567762 Intron 7 5279 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2030840 chr15 84584134 Intron 7 11093 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1480827 chr15 84577792 Intron 7 4751 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401173 chr15 84576970 Intron 7 3929 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4842838 chr15 84582124 Coding 2b ASSOCIATION 20189936 Height 7.0 ADAMTSL3 ASSOCIATION 19343178 Height 7.52287874528 ADAMTSL3 FUNCTIONAL_SNP rs4842923 chr15 84581904 Coding 6 220 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7183263 chr15 84573041 Intron 2b 9083 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259937 chr15 84587833 Intron 5a 5709 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12914857 chr15 84581166 Intron 5a 958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4842924 chr15 84587607 Intron 5a 5483 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11637866 chr15 84587958 Intron 5a 5834 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401171 chr15 84557676 Intron 5b 24448 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;0.857 FUNCTIONAL_SNP rs1564472 chr15 84569793 Intron 5b 12331 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.918;0.842, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259935 chr15 84580427 Intron 5b 1697 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259936 chr15 84580582 Intron 5b 1542 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2030839 chr15 84583959 Intron 5b 1835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs899926 chr15 84573491 Intron 5b 8633 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6603004 chr15 84568504 Intron 5b 13620 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1480823 chr15 84585746 Intron 5b 3622 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10520573 chr15 84591575 Intron 5b 9451 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11633301 chr15 84585038 Intron 6 2914 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2055712 chr15 84581605 Intron 6 519 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8030379 chr15 84590910 Intron 6 8786 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs1852264 chr15 84589940 Intron 6 7816 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.923, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259933 chr15 84580156 Intron 6 1968 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401172 chr15 84576957 Intron 7 5167 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401174 chr15 84576992 Intron 7 5132 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401175 chr15 84578217 Intron 7 3907 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259929 chr15 84577202 Intron 7 4922 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1880730 chr15 84584184 Intron 7 2060 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11259934 chr15 84580171 Intron 7 1953 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2061999 chr15 84582740 Intron 7 616 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1526080 chr15 84589920 Intron 7 7796 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs2135880 chr15 84589613 Intron 7 7489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs8029016 chr15 84586464 Intron 7 4340 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10906982 chr15 84568158 Intron 7 13966 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs7496814 chr15 84584959 Intron 7 2835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2046120 chr15 84567762 Intron 7 14362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2030840 chr15 84584134 Intron 7 2010 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1480827 chr15 84577792 Intron 7 4332 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2401173 chr15 84576970 Intron 7 5154 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6496932 chr15 85825567 Intron 5b ASSOCIATION 20719862 Central corneal thickness 8.0 DNM1P45 - AKAP13 FUNCTIONAL_SNP rs12901648 chr15 85951718 Intron 4 126151 CEU:0.939;0.831, CHB:0.933;0.694, JPT:0.839;0.703 FUNCTIONAL_SNP rs4843049 chr15 85874372 Intron 4 48805 CEU:1.0;0.811, CHB:1.0;1.0, JPT:1.0;0.936 FUNCTIONAL_SNP rs2002642 chr15 85827744 Intron 5b 2177 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs12917495 chr15 85829561 Intron 7 3994 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2003294 chr15 85817372 Intron 7 8195 CEU:1.0;0.894, CHB:0.879;0.661, JPT:1.0;0.807 FUNCTIONAL_SNP rs11638110 chr15 85822884 Intron 7 2683 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs7176093 chr15 86369430 Intergenic 7 ASSOCIATION 17903295 Aging traits 5.15490195999 KLHL25 - AGBL1 LEAD_SNP rs16977195 chr15 86984240 Intron 6 ASSOCIATION 18347602 Schizophrenia 5.69897000434 AGBL1 LEAD_SNP rs11636768 chr15 87695511 Intergenic 7 ASSOCIATION 21448238 Migraine 6.30102999566 AGBL1 - NCRNA00052 LEAD_SNP rs8041863 chr15 89359689 Intron 7 ASSOCIATION 18391952 Height 7.09691001301 ACAN FUNCTIONAL_SNP rs8030631 chr15 89357857 Intron 4 1832 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs938614 chr15 89354886 Intron 5b 4803 CEU:1.0;0.824, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.86 FUNCTIONAL_SNP rs8026676 chr15 89361669 Intron 7 1980 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4932217 chr15 89902032 Intergenic 4 ASSOCIATION 18193045 Height 6.09691001301 LOC100288864 LEAD_SNP rs7178909 chr15 90447946 Intron 5b ASSOCIATION 20585627 Common traits (Other) 6.30102999566 C15orf38 FUNCTIONAL_SNP rs3784386 chr15 90437426 Exon,non-coding 4 10520 CEU:0.957;0.879, CHB:1.0;0.677, JPT:1.0;1.0, YRI:0.951;0.561 FUNCTIONAL_SNP rs3784388 chr15 90437301 Exon,non-coding 4 10645 CEU:0.955;0.874, CHB:1.0;0.677, JPT:1.0;1.0 FUNCTIONAL_SNP rs3853640 chr15 90443720 Exon,non-coding 6 4226 CEU:1.0;0.92, CHB:0.946;0.851, JPT:1.0;0.781, YRI:0.923;0.82 FUNCTIONAL_SNP rs3825866 chr15 90437638 Intron 2b 10308 CEU:1.0;0.918, CHB:1.0;0.677, JPT:1.0;1.0 FUNCTIONAL_SNP rs3853638 chr15 90443140 Intron 4 4806 CEU:0.956;0.842, CHB:0.941;0.759, JPT:1.0;0.731 FUNCTIONAL_SNP rs7174330 chr15 90434579 Intron 5b 13367 CEU:0.957;0.879, CHB:1.0;0.677, JPT:1.0;1.0, YRI:0.911;0.617 FUNCTIONAL_SNP rs17241302 chr15 90406537 Intron 5b 41409 CEU:0.914;0.835, CHB:1.0;0.677, JPT:1.0;0.944, YRI:1.0;0.889 FUNCTIONAL_SNP rs17241560 chr15 90429202 Intron 6 18744 CEU:1.0;0.915, CHB:0.885;0.741, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs10852124 chr15 90430464 Intron 6 17482 CEU:1.0;0.92, CHB:1.0;0.677, JPT:1.0;1.0, YRI:0.871;0.607 FUNCTIONAL_SNP rs12437459 chr15 90420773 Intron 6 27173 CEU:0.957;0.879, CHB:0.893;0.759, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs2174292 chr15 90415581 Intron 6 32365 CEU:0.957;0.879, CHB:0.893;0.759, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs2043881 chr15 90439960 Intron 6 7986 CEU:0.957;0.879, CHB:0.936;0.621, JPT:1.0;1.0, YRI:0.9;0.517 FUNCTIONAL_SNP rs2043882 chr15 90439753 Intron 6 8193 CEU:0.957;0.879, CHB:0.873;0.568, JPT:1.0;0.781, YRI:0.905;0.546 FUNCTIONAL_SNP rs8038480 chr15 90441597 Intron 7 6349 CEU:0.957;0.879, CHB:0.763;0.502, JPT:1.0;0.731 LEAD_SNP rs12915189 chr15 91114376 Intron 4 ASSOCIATION 21130836 Information processing speed 5.52287874528 CRTC3 FUNCTIONAL_SNP rs7180053 chr15 91114735 Intron 4 359 CEU:1.0;0.951, CHB:1.0;0.764, JPT:1.0;0.58, YRI:1.0;1.0 FUNCTIONAL_SNP rs6496696 chr15 91129108 Intron 5a 14732 CEU:1.0;0.911, JPT:1.0;0.731 FUNCTIONAL_SNP rs7498042 chr15 91119014 Intron 7 4638 CEU:1.0;0.953, JPT:1.0;0.731, YRI:1.0;1.0 LEAD_SNP rs2677744 chr15 91450441 Intron 4 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 6.0 MAN2A2 LEAD_SNP rs8042680 chr15 91521337 Intron 6 ASSOCIATION 20581827 Type 2 diabetes 9.69897000434 PRC1 FUNCTIONAL_SNP rs1867219 chr15 91503871 Intron 2b 17466 CEU:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs12898311 chr15 91517780 Intron 5a 3557 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6496743 chr15 91528358 Intron 7 7021 CEU:1.0;1.0, YRI:1.0;0.743 LEAD_SNP rs886144 chr15 91717352 Intron 7 ASSOCIATION 19043545 Serum metabolites 6.69897000434 VPS33B - SV2B LEAD_SNP rs3924426 chr15 92445873 Intron 7 ASSOCIATION 18521091 Response to iloperidone treatment (QT prolongation) 5.69897000434 SLCO3A1 LEAD_SNP rs7495052 chr15 92552029 Intron 6 ASSOCIATION 18821565 Inattentive symptoms 5.52287874528 SLCO3A1 LEAD_SNP rs8040009 chr15 93044339 Exon,non-coding 6 ASSOCIATION 21529783 Alcoholism (heaviness of drinking) 6.52287874528 C15orf32 ASSOCIATION 20386566 Bipolar disorder 5.22184874962 C15orf32 LEAD_SNP rs1455782 chr15 93050966 Intergenic 5a ASSOCIATION 17903307 Pulmonary function traits (other) 5.39794000867 C15orf32 - FAM174B FUNCTIONAL_SNP rs2124363 chr15 93053681 Intergenic 4 2715 CEU:1.0;0.905, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs285757 chr15 93179175 Intron 4 ASSOCIATION 21160409 HIV-1 susceptibility 5.15490195999 FAM174B LEAD_SNP rs7175404 chr15 94036688 Intron 6 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 6.22184874962 UNQ9370 - RPL26P5 LEAD_SNP rs2388436 chr15 94689653 Intergenic 7 ASSOCIATION 21190210 Hoarding 5.22184874962 UNQ9370 - RPL26P5 FUNCTIONAL_SNP rs1545779 chr15 94688757 Intergenic 7 896 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2086328 chr15 94685949 Intergenic 7 3704 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11074253 chr15 94689350 Intergenic 7 303 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.884 LEAD_SNP rs4984390 chr15 94939508 Intron 7 ASSOCIATION 19483685 Drug-induced liver injury (flucloxacillin) 5.39794000867 MCTP2 LEAD_SNP rs1014922 chr15 95165580 Intergenic 5b ASSOCIATION 21658281 Sudden cardiac arrest 5.52287874528 MCTP2 - RNU2-3P FUNCTIONAL_SNP rs6496026 chr15 95172383 Intergenic 7 6803 CEU:1.0;0.8, CHB:1.0;0.946, JPT:1.0;0.937 LEAD_SNP rs7173947 chr15 95270467 Intergenic 7 ASSOCIATION 20139978 Hematological and biochemical traits 7.52287874528 MCTP2 - RNU2-3P FUNCTIONAL_SNP rs8036171 chr15 95266810 Intergenic 5b 3657 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.86 FUNCTIONAL_SNP rs7168523 chr15 95263911 Intergenic 7 6556 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7181498 chr15 95271404 Intergenic 7 937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7179870 chr15 95271264 Intergenic 7 797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7170018 chr15 95265993 Intergenic 7 4474 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7176675 chr15 95257956 Intergenic 7 12511 CEU:1.0;1.0, CHB:1.0;0.846, JPT:1.0;0.937, YRI:1.0;0.894 FUNCTIONAL_SNP rs7178731 chr15 95270732 Intergenic 7 265 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6496074 chr15 95511837 Intergenic 7 ASSOCIATION 20125193 Cognitive test performance 5.52287874528 MCTP2 - RNU2-3P FUNCTIONAL_SNP rs744474 chr15 95509819 Intergenic 7 2018 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs1031644 chr15 95509944 Intergenic 7 1893 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;0.93, YRI:1.0;0.961 LEAD_SNP rs933769 chr15 96052742 Intergenic 7 ASSOCIATION 21529783 Alcoholism (alcohol dependence factor score) 5.15490195999 MCTP2 - RNU2-3P FUNCTIONAL_SNP rs933770 chr15 96052722 Intergenic 6 20 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs8026212 chr15 96053612 Intergenic 7 870 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9920980 chr15 96062037 Intergenic 7 9295 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4321143 chr15 96156368 Intergenic 7 ASSOCIATION 18846501 Conduct disorder (interaction) 5.15490195999 MCTP2 - RNU2-3P FUNCTIONAL_SNP rs7162535 chr15 96158598 Intergenic 5a 2230 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.883 FUNCTIONAL_SNP rs7163129 chr15 96158885 Intergenic 5b 2517 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.883 FUNCTIONAL_SNP rs7164160 chr15 96159374 Intergenic 6 3006 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.883 FUNCTIONAL_SNP rs2397808 chr15 96150590 Intergenic 7 5778 CEU:1.0;0.949, CHB:0.937;0.826, JPT:1.0;0.933, YRI:1.0;0.923 FUNCTIONAL_SNP rs10520792 chr15 96151914 Intergenic 7 4454 CEU:1.0;1.0, CHB:0.936;0.823, JPT:1.0;0.933, YRI:1.0;0.922 LEAD_SNP rs2567426 chr15 96332861 Intergenic 6 ASSOCIATION 21130836 Information processing speed 5.52287874528 RNU2-3P - NR2F2 FUNCTIONAL_SNP rs2639171 chr15 96341254 Intergenic 5b 8393 CEU:1.0;1.0, CHB:1.0;0.867, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2567429 chr15 96325059 Intergenic 6 7802 CEU:1.0;1.0, CHB:1.0;0.873, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2584235 chr15 96330639 Intergenic 7 2222 CEU:1.0;1.0, CHB:1.0;0.873, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2398162 chr15 96830550 Intron 7 ASSOCIATION 17554300 Hypertension 5.22184874962 RNU2-3P - NR2F2 LEAD_SNP rs4533251 chr15 97262427 Intergenic 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.39794000867 RPL31P55 - SPATA8 LEAD_SNP rs4965121 chr15 98518792 Intergenic 6 ASSOCIATION 20634892 Neuroticism 6.0 ARRDC4 - FAM169B FUNCTIONAL_SNP rs1043372 chr15 98516133 Exon,non-coding 6 2659 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1043374 chr15 98516622 Exon,non-coding 6 2170 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2871865 chr15 99194896 Intron 4 ASSOCIATION 20881960 Height 20.5228787453 IGF1R LEAD_SNP rs4533267 chr15 100786271 Intron 5a ASSOCIATION 18391951 Height 7.52287874528 ADAMTS17 LEAD_SNP rs11855415 chr15 101875123 Intron 5a ASSOCIATION 21051773 Handedness in dyslexia 7.69897000434 PCSK6 LEAD_SNP rs7189020 chr16 304803 Intron 7 ASSOCIATION 19862010 Mean corpuscular volume 11.6989700043 ITFG3 LEAD_SNP rs1122794 chr16 309155 Intron 7 ASSOCIATION 19862010 Mean corpuscular hemoglobin 9.52287874528 ITFG3 LEAD_SNP rs763014 chr16 675680 Intron 5b ASSOCIATION 18391950 Height 5.30102999566 RAB40C LEAD_SNP rs1065656 chr16 1838836 Exon,non-coding 5b ASSOCIATION 21216879 Insulin-like growth factors 11.0 NUBP2 LEAD_SNP rs2516739 chr16 2097158 Intron 4 ASSOCIATION 20834067 Longevity 6.0 NTHL1;TSC2 LEAD_SNP rs26868 chr16 2249376 Intergenic 5b ASSOCIATION 20881960 Height 16.0457574906 CASKIN1 - MLST8 FUNCTIONAL_SNP rs27384 chr16 2248888 Intergenic 5b 488 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs886427 chr16 3023605 Intron 4 ASSOCIATION 20694148 Metabolic syndrome 5.22184874962 PKMYT1;PAQR4 LEAD_SNP rs2444217 chr16 4038387 Intron 2b ASSOCIATION 20935630 Body mass index 7.04575749056 ADCY9 FUNCTIONAL_SNP rs2531977 chr16 4043701 Intron 6 5314 CEU:0.956;0.811, CHB:0.952;0.907, JPT:1.0;0.953 FUNCTIONAL_SNP rs2601791 chr16 4043175 Intron 7 4788 CEU:0.957;0.814, CHB:0.952;0.907, JPT:1.0;0.953 LEAD_SNP rs2601828 chr16 4103871 Intron 4 ASSOCIATION 20522523 Partial epilepsies 6.0 ADCY9 FUNCTIONAL_SNP rs7203542 chr16 4101005 Intron 7 2866 CEU:1.0;0.851, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.815 LEAD_SNP rs6500744 chr16 6113661 Intergenic 7 ASSOCIATION 18846501 Conduct disorder (interaction) 5.52287874528 RBFOX1 LEAD_SNP rs12921846 chr16 6910385 Intron 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.04575749056 RBFOX1 LEAD_SNP rs9302841 chr16 7227122 Intron 7 ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 5.69897000434 RBFOX1 LEAD_SNP rs4787008 chr16 7415552 Intron 7 ASSOCIATION 21441570 Diabetic retinopathy 6.22184874962 RBFOX1 FUNCTIONAL_SNP rs4290489 chr16 7395436 Intron 5b 20116 CEU:1.0;0.819 FUNCTIONAL_SNP rs6500948 chr16 7371458 Intron 7 44094 CEU:1.0;0.888 LEAD_SNP rs9924951 chr16 7504854 Intron 5b ASSOCIATION 19043545 Serum metabolites 6.30102999566 RBFOX1 FUNCTIONAL_SNP rs9935875 chr16 7504596 Intron 7 258 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.93, YRI:1.0;0.918 FUNCTIONAL_SNP rs9935962 chr16 7504670 Intron 7 184 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.93, YRI:1.0;0.918 FUNCTIONAL_SNP rs2159535 chr16 7507677 Intron 7 2823 CEU:1.0;1.0, CHB:1.0;0.875, JPT:1.0;0.857, YRI:1.0;0.961 FUNCTIONAL_SNP rs11649628 chr16 7505889 Intron 7 1035 CEU:1.0;1.0, CHB:1.0;0.936, JPT:0.925;0.856, YRI:1.0;0.875 LEAD_SNP rs3112740 chr16 7836297 Intergenic 7 ASSOCIATION 19247474 Smoking behavior 5.22184874962 RPS26P51 - TMEM114 LEAD_SNP rs17550532 chr16 9744095 Intergenic 7 ASSOCIATION 21658281 Sudden cardiac arrest 5.69897000434 RPL21P119 - GRIN2A FUNCTIONAL_SNP rs759319 chr16 9752073 Intergenic 4 7978 CEU:0.941;0.835, CHB:1.0;1.0, JPT:1.0;0.864 FUNCTIONAL_SNP rs16965984 chr16 9741412 Intergenic 7 2683 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11642363 chr16 9742790 Intergenic 7 1305 CEU:1.0;0.817, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17550406 chr16 9741343 Intergenic 7 2752 CEU:1.0;0.843, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1463132 chr16 10183087 Intron 7 ASSOCIATION 20041166 HIV-1 control 5.09691001301 GRIN2A LEAD_SNP rs13335336 chr16 10559263 Intron 6 ASSOCIATION 20195266 Response to antipsychotic treatment 6.15490195999 ATF7IP2 FUNCTIONAL_SNP rs9938547 chr16 10577661 Intergenic 5a 18398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.72 FUNCTIONAL_SNP rs9930073 chr16 10562302 Intron 5b 3039 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.718 FUNCTIONAL_SNP rs7198868 chr16 10549245 Intron 7 10018 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.878;0.625, YRI:0.953;0.738 FUNCTIONAL_SNP rs13336386 chr16 10569000 Intron 7 9737 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.904, YRI:1.0;0.875 FUNCTIONAL_SNP rs9923282 chr16 10562603 Intron 7 3340 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.72, YRI:1.0;0.957 FUNCTIONAL_SNP rs1125474 chr16 10578805 Intergenic 7 19542 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.72 FUNCTIONAL_SNP rs9926545 chr16 10564301 Intron 7 5038 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;0.916 FUNCTIONAL_SNP rs13338992 chr16 10560738 Intron 7 1475 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs9935483 chr16 10560385 Intron 7 1122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13335292 chr16 10537866 Intron 7 21397 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.891;0.718, YRI:1.0;0.916 LEAD_SNP rs11074889 chr16 10633165 Intron 5b ASSOCIATION 20732626 Attention deficit hyperactivity disorder 6.15490195999 EMP2 LEAD_SNP rs4781011 chr16 10975311 Intron 2b ASSOCIATION 20228799 Ulcerative colitis 5.52287874528 CIITA FUNCTIONAL_SNP rs12928665 chr16 10971474 Intron 2b 3837 CEU:1.0;0.883 FUNCTIONAL_SNP rs6416647 chr16 10965597 Intergenic 4 9714 CEU:1.0;0.941, CHB:1.0;0.677, JPT:1.0;0.699 FUNCTIONAL_SNP rs8043545 chr16 10982345 Intron 4 7034 CEU:0.939;0.831 FUNCTIONAL_SNP rs6498116 chr16 10969282 Intergenic 4 6029 CEU:1.0;0.877 FUNCTIONAL_SNP rs11074934 chr16 10979440 Intron 4 4129 CEU:1.0;0.89 FUNCTIONAL_SNP rs12596540 chr16 10970476 Intergenic 7 4835 CEU:1.0;0.883 LEAD_SNP rs6498142 chr16 11081249 Intron 6 ASSOCIATION 20694011 Immunoglobulin A 6.69897000434 CLEC16A FUNCTIONAL_SNP rs12708713 chr16 11072459 Intron 6 8790 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.876;0.659 FUNCTIONAL_SNP rs12934193 chr16 11103725 Intron 6 22476 CEU:1.0;0.913, CHB:1.0;0.843, JPT:1.0;0.527 FUNCTIONAL_SNP rs1035088 chr16 11048374 Intron 6 32875 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;0.821 FUNCTIONAL_SNP rs12923849 chr16 11061997 Intron 7 19252 CEU:1.0;0.913, CHB:1.0;0.553, JPT:1.0;0.758 LEAD_SNP rs11865121 chr16 11166688 Intron 4 ASSOCIATION 19525953 Multiple sclerosis 6.69897000434 CLEC16A FUNCTIONAL_SNP rs7204643 chr16 11167603 Intron 4 915 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.915;0.804 FUNCTIONAL_SNP rs9929994 chr16 11178245 Intron 5b 11557 CEU:1.0;0.808, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9652582 chr16 11174564 Intron 5b 7876 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs2041670 chr16 11174652 Intron 5b 7964 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.921 FUNCTIONAL_SNP rs12925642 chr16 11171602 Intron 6 4914 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.879 FUNCTIONAL_SNP rs725613 chr16 11169683 Intron 7 2995 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.879 LEAD_SNP rs12708716 chr16 11179873 Intron 5b ASSOCIATION 19430480 Type 1 diabetes 15.6989700043 CLEC16A ASSOCIATION 18978792 Type 1 diabetes 12.15490196 CLEC16A ASSOCIATION 17554300 Type 1 diabetes 6.30102999566 CLEC16A ASSOCIATION 17554260 Type 1 diabetes 17.5228787453 CLEC16A FUNCTIONAL_SNP rs9652601 chr16 11174365 Intron 5b 5508 CEU:1.0;0.808, CHB:1.0;0.932, JPT:1.0;0.91, YRI:1.0;0.962 FUNCTIONAL_SNP rs9888908 chr16 11181244 Intron 7 1371 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs12924729 chr16 11187783 Intron 5b ASSOCIATION 21399635 Primary biliary cirrhosis 11.5228787453 CLEC16A FUNCTIONAL_SNP rs8062322 chr16 11092319 Intron 2b 95464 CEU:0.944;0.844, CHB:1.0;0.937, JPT:1.0;0.92 FUNCTIONAL_SNP rs9746695 chr16 11207894 Intron 3a 20111 CEU:1.0;0.947, CHB:1.0;0.884, JPT:1.0;0.849 FUNCTIONAL_SNP rs12928537 chr16 11191400 Intron 4 3617 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11865121 chr16 11166688 Intron 4 21095 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.522 FUNCTIONAL_SNP rs7204643 chr16 11167603 Intron 4 20180 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12919083 chr16 11188930 Intron 4 1147 CEU:1.0;0.947, CHB:1.0;0.667, JPT:1.0;0.787, YRI:1.0;0.928 FUNCTIONAL_SNP rs7198621 chr16 11167458 Intron 5a 20325 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.513 FUNCTIONAL_SNP rs11860603 chr16 11165017 Intron 5b 22766 CEU:1.0;0.941, CHB:1.0;0.939, JPT:1.0;0.913 FUNCTIONAL_SNP rs9926367 chr16 11093179 Intron 5b 94604 CEU:0.94;0.884, CHB:1.0;1.0, JPT:1.0;0.913 FUNCTIONAL_SNP rs9652582 chr16 11174564 Intron 5b 13219 CEU:1.0;0.943, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.543 FUNCTIONAL_SNP rs9652601 chr16 11174365 Intron 5b 13418 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;0.909, YRI:1.0;1.0 FUNCTIONAL_SNP rs12927355 chr16 11194771 Intron 5b 6988 CEU:1.0;0.947, CHB:1.0;0.652, JPT:1.0;0.915 FUNCTIONAL_SNP rs2041670 chr16 11174652 Intron 5b 13131 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.529 FUNCTIONAL_SNP rs12925642 chr16 11171602 Intron 6 16181 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7200940 chr16 11164567 Intron 7 23216 CEU:0.946;0.896, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs9888908 chr16 11181244 Intron 7 6539 CEU:1.0;0.947, CHB:1.0;0.937, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2903692 chr16 11238783 Intron 6 ASSOCIATION 17632545 Type 1 diabetes 10.15490196 CLEC16A FUNCTIONAL_SNP rs12917893 chr16 11239978 Intron 7 1195 CEU:1.0;0.952, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6498169 chr16 11249329 Intron 2b ASSOCIATION 17660530 Multiple sclerosis 5.39794000867 CLEC16A FUNCTIONAL_SNP rs794424 chr16 11242814 Intron 5b 6515 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.942 LEAD_SNP rs416603 chr16 11364079 Intergenic 7 ASSOCIATION 18978792 Type 1 diabetes 5.52287874528 TNP2 FUNCTIONAL_SNP rs415595 chr16 11363692 Intergenic 7 387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12928822 chr16 11403893 Intergenic 4 ASSOCIATION 20190752 Celiac disease 7.52287874528 PRM1 - C16orf75 FUNCTIONAL_SNP rs2032933 chr16 11445040 Exon,non-coding 5b 41147 CEU:1.0;0.813, CHB:1.0;0.823, JPT:1.0;0.65 FUNCTIONAL_SNP rs12598646 chr16 11406519 Intergenic 2b 2626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12924957 chr16 11403766 Intergenic 4 127 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8050084 chr16 11407280 Intergenic 4 3387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12927773 chr16 11403963 Intergenic 4 70 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.534 FUNCTIONAL_SNP rs7184969 chr16 11397206 Intergenic 4 6687 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2216763 chr16 11404428 Intergenic 4 535 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9932855 chr16 11406544 Intergenic 4 2651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12162021 chr16 11403013 Intergenic 4 880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12918017 chr16 11402350 Intergenic 5a 1543 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12600282 chr16 11401866 Intergenic 5a 2027 CEU:1.0;0.927, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7197188 chr16 11443424 Intron 5b 39531 CEU:1.0;0.813, CHB:1.0;0.823, JPT:1.0;0.65 FUNCTIONAL_SNP rs6498184 chr16 11435990 Intron 5b 32097 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12596260 chr16 11398265 Intergenic 6 5628 CEU:1.0;0.811, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs2867936 chr16 11398698 Intergenic 6 5195 CEU:1.0;0.812, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs12922090 chr16 11415117 Intron 6 11224 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2867937 chr16 11398798 Intergenic 7 5095 CEU:1.0;0.812, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 LEAD_SNP rs7203193 chr16 11641180 Intergenic 5b ASSOCIATION 21347282 Coronary heart disease 5.52287874528 LITAF LEAD_SNP rs8049607 chr16 11691753 Intergenic 4 ASSOCIATION 19305408 QT interval 14.3010299957 LITAF - SNN ASSOCIATION 19305409 QT interval 14.2218487496 LITAF - SNN LEAD_SNP rs7192086 chr16 13061611 Intron 7 ASSOCIATION 18677311 Schizophrenia 5.22184874962 SHISA9 FUNCTIONAL_SNP rs924546 chr16 13046720 Intron 7 14891 CEU:1.0;0.949, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12922810 chr16 13034114 Intron 7 27497 CEU:1.0;0.947, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs153091 chr16 13253956 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 5.69897000434 SHISA9 FUNCTIONAL_SNP rs2819631 chr16 13257970 Intron 6 4014 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.858 FUNCTIONAL_SNP rs153089 chr16 13255874 Intron 7 1918 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.951 FUNCTIONAL_SNP rs2819632 chr16 13257674 Intron 7 3718 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1149419 chr16 13255107 Intron 7 1151 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;1.0 LEAD_SNP rs2113334 chr16 13976356 Intergenic 7 ASSOCIATION 20694148 Metabolic syndrome 5.52287874528 SHISA9 - ERCC4 FUNCTIONAL_SNP rs4780547 chr16 13977147 Intergenic 5b 791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.918 LEAD_SNP rs3136202 chr16 14038174 Intron 7 ASSOCIATION 20585324 Conduct disorder (symptom count) 5.22184874962 ERCC4 FUNCTIONAL_SNP rs3136168 chr16 14032454 Intron 5a 5720 CEU:0.947;0.852, CHB:1.0;1.0, JPT:0.939;0.881, YRI:1.0;0.928 LEAD_SNP rs1659127 chr16 14388305 Intergenic 6 ASSOCIATION 21102462 Menarche (age at onset) 8.39794000867 CGI-148P - PARN LEAD_SNP rs1136001 chr16 15131974 Coding 5b ASSOCIATION 20189936 Height 5.15490195999 PDXDC1;NTAN1 FUNCTIONAL_SNP rs7200543 chr16 15129970 Coding 7 2004 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1135999 chr16 15131962 Coding 5b 12 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6498540 chr16 15130594 Exon,non-coding 7 1380 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs2740 chr16 15132108 Intron 7 134 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.928 LEAD_SNP rs12444979 chr16 19933600 Intergenic 7 ASSOCIATION 20935630 Body mass index 20.5228787453 GPRC5B - GPR139 FUNCTIONAL_SNP rs12446554 chr16 19935073 Intergenic 6 1473 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11639988 chr16 19944363 Intergenic 6 10763 CEU:1.0;1.0 FUNCTIONAL_SNP rs8054079 chr16 19975407 Intergenic 6 41807 CEU:1.0;1.0 FUNCTIONAL_SNP rs6497416 chr16 19876145 Intron 7 57455 CEU:1.0;1.0 FUNCTIONAL_SNP rs12446632 chr16 19935389 Intergenic 7 1789 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12444268 chr16 20342572 Intergenic 7 ASSOCIATION 19430480 Type 1 diabetes 6.69897000434 GP2 - UMOD LEAD_SNP rs4293393 chr16 20364588 Intergenic 6 ASSOCIATION 20686651 Chronic kidney disease and serum creatinine levels 9.39794000867 UMOD FUNCTIONAL_SNP rs13335818 chr16 20359831 Coding 4 4757 CEU:1.0;1.0, YRI:1.0;0.523 FUNCTIONAL_SNP rs13329952 chr16 20366507 Intergenic 2b 1919 CEU:1.0;0.91 FUNCTIONAL_SNP rs9928936 chr16 20353049 Intron 5b 11539 CEU:1.0;1.0 FUNCTIONAL_SNP rs12917707 chr16 20367690 Intergenic 5b 3102 CEU:1.0;1.0 FUNCTIONAL_SNP rs9928757 chr16 20352863 Intron 5b 11725 CEU:1.0;0.827 FUNCTIONAL_SNP rs12922822 chr16 20367645 Intergenic 6 3057 CEU:1.0;1.0 FUNCTIONAL_SNP rs13333226 chr16 20365654 Intergenic 6 1066 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs13333226 chr16 20365654 Intergenic 6 ASSOCIATION 21082022 Hypertension 10.3979400087 UMOD FUNCTIONAL_SNP rs13335818 chr16 20359831 Coding 4 5823 CEU:1.0;1.0 FUNCTIONAL_SNP rs13329952 chr16 20366507 Intergenic 2b 853 CEU:1.0;0.91 FUNCTIONAL_SNP rs9928936 chr16 20353049 Intron 5b 12605 CEU:1.0;1.0 FUNCTIONAL_SNP rs12917707 chr16 20367690 Intergenic 5b 2036 CEU:1.0;1.0 FUNCTIONAL_SNP rs9928757 chr16 20352863 Intron 5b 12791 CEU:1.0;0.827 FUNCTIONAL_SNP rs12922822 chr16 20367645 Intergenic 6 1991 CEU:1.0;1.0 FUNCTIONAL_SNP rs4293393 chr16 20364588 Intergenic 6 1066 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs12917707 chr16 20367690 Intergenic 5b ASSOCIATION 20383146 Chronic kidney disease 20.0 UMOD - PDILT ASSOCIATION 19430482 Renal function and chronic kidney disease 11.6989700043 UMOD - PDILT ASSOCIATION 19430482 Renal function and chronic kidney disease 15.3010299957 UMOD - PDILT FUNCTIONAL_SNP rs13335818 chr16 20359831 Coding 4 7859 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs13329952 chr16 20366507 Intergenic 2b 1183 CEU:1.0;1.0 FUNCTIONAL_SNP rs9928936 chr16 20353049 Intron 5b 14641 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs9928757 chr16 20352863 Intron 5b 14827 CEU:1.0;0.835, CHB:1.0;1.0 FUNCTIONAL_SNP rs12922822 chr16 20367645 Intergenic 6 45 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs13333226 chr16 20365654 Intergenic 6 2036 CEU:1.0;1.0 FUNCTIONAL_SNP rs4293393 chr16 20364588 Intergenic 6 3102 CEU:1.0;1.0 LEAD_SNP rs151222 chr16 20674492 Intron 7 ASSOCIATION 18347602 Schizophrenia 5.22184874962 ACSM1 FUNCTIONAL_SNP rs234993 chr16 20647644 Intron 5a 26848 CEU:1.0;1.0, CHB:1.0;0.851, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs231921 chr16 20661761 Intron 6 12731 CEU:1.0;1.0, CHB:1.0;0.851, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs433598 chr16 20680206 Intron 6 ASSOCIATION 20185149 Schizophrenia 5.52287874528 ACSM1 FUNCTIONAL_SNP rs234279 chr16 20688629 Intron 5b 8423 CEU:1.0;0.957, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs396508 chr16 20682354 Intron 7 2148 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs180149 chr16 20676969 Intron 7 3237 CEU:1.0;0.831 FUNCTIONAL_SNP rs395501 chr16 20683296 Intron 7 3090 CEU:1.0;0.831 LEAD_SNP rs8049603 chr16 23067260 Intergenic 7 ASSOCIATION 19525955 Multiple sclerosis 6.0 HS3ST2 - USP31 FUNCTIONAL_SNP rs4968046 chr16 23078389 Exon,non-coding 7 11129 CEU:1.0;1.0, CHB:1.0;0.546, JPT:1.0;0.61, YRI:1.0;1.0 FUNCTIONAL_SNP rs4494543 chr16 23197115 Intron 2b 129855 CEU:1.0;0.863, JPT:0.898;0.542 FUNCTIONAL_SNP rs17796129 chr16 23072105 Intergenic 4 4845 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4073291 chr16 23195993 Intron 5b 128733 CEU:1.0;0.862, JPT:1.0;0.61 FUNCTIONAL_SNP rs4073930 chr16 23195646 Intron 5b 128386 CEU:1.0;0.862, JPT:1.0;0.61 FUNCTIONAL_SNP rs4073931 chr16 23195717 Intron 5b 128457 CEU:1.0;0.862, JPT:1.0;0.61 FUNCTIONAL_SNP rs11074541 chr16 23071932 Intergenic 5b 4672 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4967946 chr16 23120003 Intron 6 52743 CEU:1.0;0.848, JPT:1.0;0.608, YRI:1.0;1.0 FUNCTIONAL_SNP rs12934362 chr16 23196591 Intron 6 129331 CEU:1.0;0.862, JPT:1.0;0.61 FUNCTIONAL_SNP rs7203677 chr16 23063866 Intergenic 6 3394 CEU:1.0;0.923, CHB:1.0;0.783, JPT:1.0;0.796, YRI:1.0;1.0 FUNCTIONAL_SNP rs12149898 chr16 23198054 Intron 7 130794 CEU:1.0;0.87, CHB:0.91;0.501, JPT:0.904;0.561 FUNCTIONAL_SNP rs6497643 chr16 23062681 Intergenic 7 4579 CEU:1.0;0.923, CHB:1.0;0.783, JPT:1.0;0.796, YRI:1.0;1.0 FUNCTIONAL_SNP rs6497644 chr16 23067920 Intergenic 7 660 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12444219 chr16 23150027 Intron 7 82767 CEU:1.0;1.0, CHB:1.0;0.53, JPT:1.0;0.61, YRI:1.0;1.0 LEAD_SNP rs420259 chr16 23634026 Intron 6 ASSOCIATION 17554300 Bipolar disorder 7.22184874962 PALB2 FUNCTIONAL_SNP rs249954 chr16 23640467 Intron 7 6441 CEU:0.937;0.825, CHB:1.0;0.951, JPT:1.0;0.944, YRI:1.0;1.0 LEAD_SNP rs4968031 chr16 23765774 Intergenic 5b ASSOCIATION 21507922 Platelet counts 6.0 CHP2 LEAD_SNP rs11643520 chr16 24531718 Intergenic 7 ASSOCIATION 20171287 Brain structure 6.22184874962 RNU7-24P - RBBP6 FUNCTIONAL_SNP rs7196581 chr16 24552179 Intron 2b 20461 CEU:1.0;0.879 FUNCTIONAL_SNP rs16973822 chr16 24558271 Intron 5b 26553 CEU:1.0;0.879 FUNCTIONAL_SNP rs16973830 chr16 24568716 Intron 6 36998 CEU:1.0;0.879 LEAD_SNP rs2203512 chr16 27056455 Intergenic 7 ASSOCIATION 19734545 Cognitive performance 6.52287874528 EPF8 - C16orf82 FUNCTIONAL_SNP rs2203513 chr16 27056568 Intergenic 6 113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8057551 chr16 27434927 Intron 7 ASSOCIATION 19874204 Bone mineral density 5.69897000434 IL21R FUNCTIONAL_SNP rs6498029 chr16 27433394 Intron 2b 1533 CEU:1.0;1.0, CHB:1.0;0.952, JPT:0.947;0.896, YRI:1.0;0.877 FUNCTIONAL_SNP rs3093291 chr16 27439483 Intron 3a 4556 CEU:1.0;1.0, CHB:0.901;0.742, JPT:1.0;0.953, YRI:1.0;0.926 FUNCTIONAL_SNP rs8049804 chr16 27436783 Intron 5a 1856 CEU:1.0;1.0, CHB:1.0;0.873, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs6498026 chr16 27431681 Intron 5a 3246 CEU:1.0;0.947, CHB:1.0;0.908, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs8062670 chr16 27435206 Intron 5b 279 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7184992 chr16 27432010 Intron 6 2917 CEU:1.0;0.887, CHB:1.0;0.909, JPT:1.0;0.947 FUNCTIONAL_SNP rs8061992 chr16 27435038 Intron 6 111 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11074861 chr16 27434318 Intron 6 609 CEU:1.0;1.0, CHB:1.0;0.914, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs7199138 chr16 27434533 Intron 7 394 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs9930086 chr16 27435778 Intron 7 851 CEU:1.0;1.0, CHB:0.9;0.774, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7203086 chr16 27431892 Intron 7 3035 CEU:1.0;0.949, CHB:1.0;0.914, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2040790 chr16 27432735 Intron 7 2192 CEU:1.0;1.0, CHB:1.0;0.912, JPT:1.0;0.952, YRI:1.0;0.959 LEAD_SNP rs151181 chr16 28490517 Intron 6 ASSOCIATION 21102463 Crohn's disease 10.6989700043 CLN3 FUNCTIONAL_SNP rs180743 chr16 28507644 Coding 5b 17127 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;0.895 FUNCTIONAL_SNP rs40831 chr16 28508447 Coding 5b 17930 CEU:0.954;0.8 FUNCTIONAL_SNP rs762634 chr16 28603335 Exon,non-coding 5b 112818 CEU:0.952;0.865, JPT:0.851;0.563 FUNCTIONAL_SNP rs4788084 chr16 28539848 Intergenic 2a 49331 CEU:1.0;0.874, CHB:1.0;0.671 FUNCTIONAL_SNP rs149299 chr16 28485141 Intron 2b 5376 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4788073 chr16 28594549 Intron 2b 104032 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627 FUNCTIONAL_SNP rs1074631 chr16 28554108 Intergenic 4 63591 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627, YRI:1.0;0.589 FUNCTIONAL_SNP rs34835 chr16 28499291 Intron 5a 8774 CEU:1.0;0.918, CHB:1.0;0.686 FUNCTIONAL_SNP rs12446550 chr16 28543381 Intergenic 5a 52864 CEU:1.0;0.81, CHB:1.0;0.598 FUNCTIONAL_SNP rs3785354 chr16 28550667 Intergenic 5b 60150 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627 FUNCTIONAL_SNP rs27741 chr16 28504181 Intergenic 5b 13664 CEU:1.0;0.918, CHB:1.0;0.686 FUNCTIONAL_SNP rs3859172 chr16 28566158 Intron 5b 75641 CEU:1.0;0.88, CHB:1.0;0.686 FUNCTIONAL_SNP rs2077031 chr16 28603168 Intergenic 5b 112651 CEU:0.944;0.843, CHB:1.0;0.672, JPT:0.851;0.564 FUNCTIONAL_SNP rs7193402 chr16 28586127 Intron 5b 95610 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627 FUNCTIONAL_SNP rs4788076 chr16 28570005 Intron 5b 79488 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627 FUNCTIONAL_SNP rs1968752 chr16 28631585 Intron 5b 141068 CEU:0.913;0.833, CHB:0.875;0.518, JPT:0.865;0.538 FUNCTIONAL_SNP rs4787457 chr16 28555400 Intergenic 6 64883 CEU:0.951;0.862, CHB:1.0;0.754, JPT:0.879;0.627 FUNCTIONAL_SNP rs17707300 chr16 28593347 Intron 6 102830 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627, YRI:1.0;0.588 FUNCTIONAL_SNP rs28698667 chr16 28533071 Intergenic 6 42554 CEU:1.0;0.88, CHB:1.0;0.686 FUNCTIONAL_SNP rs4788074 chr16 28593597 Intron 6 103080 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627 FUNCTIONAL_SNP rs4788078 chr16 28559981 Intergenic 6 69464 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627 FUNCTIONAL_SNP rs4788079 chr16 28559363 Intergenic 6 68846 CEU:0.955;0.873, CHB:0.812;0.604, JPT:0.879;0.627 FUNCTIONAL_SNP rs4787456 chr16 28559573 Intergenic 7 69056 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627 FUNCTIONAL_SNP rs7186573 chr16 28587389 Intron 7 96872 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627 FUNCTIONAL_SNP rs4788077 chr16 28569764 Intron 7 79247 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627 FUNCTIONAL_SNP rs2411453 chr16 28632021 Intron 7 141504 CEU:0.954;0.801, CHB:1.0;0.642 FUNCTIONAL_SNP rs17640009 chr16 28595700 Intron 7 105183 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.879;0.627 FUNCTIONAL_SNP rs11074911 chr16 28583865 Intron 7 93348 CEU:0.955;0.873, CHB:1.0;0.754, JPT:0.782;0.552 LEAD_SNP rs4788084 chr16 28539848 Intergenic 2a ASSOCIATION 19430480 Type 1 diabetes 12.5228787453 IL27 - NUPR1 FUNCTIONAL_SNP rs12446550 chr16 28543381 Intergenic 5a 3533 CEU:1.0;0.957, CHB:1.0;0.871, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs28698667 chr16 28533071 Intergenic 6 6777 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8049439 chr16 28837515 Intron 2b ASSOCIATION 19915574 Inflammatory bowel disease (early onset) 8.69897000434 ATXN2L FUNCTIONAL_SNP rs7498665 chr16 28883241 Coding 5b 45726 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs7198606 chr16 28875122 Exon,non-coding 2b 37607 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs7187776 chr16 28857645 Exon,non-coding 4 20130 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs12928404 chr16 28847246 Intron 2b 9731 CEU:1.0;1.0, YRI:0.951;0.583 FUNCTIONAL_SNP rs11864107 chr16 28885931 Intergenic 2b 48416 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs8055138 chr16 28891465 Intron 2b 53950 CEU:0.954;0.869, CHB:1.0;0.588, JPT:1.0;0.514 FUNCTIONAL_SNP rs4788095 chr16 28831359 Intergenic 4 6156 CEU:1.0;1.0, CHB:1.0;0.588 FUNCTIONAL_SNP rs12325278 chr16 28848818 Intergenic 5a 11303 CEU:1.0;0.959, CHB:1.0;0.586 FUNCTIONAL_SNP rs4788100 chr16 28864673 Intron 5b 27158 CEU:1.0;0.959, CHB:1.0;0.586 FUNCTIONAL_SNP rs4788102 chr16 28873398 Intron 5b 35883 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs8061590 chr16 28895130 Intron 5b 57615 CEU:1.0;0.956, CHB:1.0;0.588 FUNCTIONAL_SNP rs7359397 chr16 28885659 Intergenic 5b 48144 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs8055982 chr16 28881202 Intron 5b 43687 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs3888190 chr16 28889486 Intergenic 5b 51971 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs12444171 chr16 28845251 Intron 5b 7736 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs12443881 chr16 28841777 Intron 5b 4262 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs4451951 chr16 28836205 Intron 5b 1310 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs4788101 chr16 28867804 Intron 6 30289 CEU:1.0;0.959, CHB:1.0;0.586 FUNCTIONAL_SNP rs4788099 chr16 28855727 Intron 6 18212 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs9972768 chr16 28861734 Intron 6 24219 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs7498555 chr16 28893571 Intron 6 56056 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs2008514 chr16 28825605 Intron 6 11910 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs8062405 chr16 28837906 Intron 6 391 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs7205323 chr16 28865892 Intron 6 28377 CEU:1.0;0.959, CHB:1.0;0.586 FUNCTIONAL_SNP rs12325113 chr16 28848668 Intergenic 6 11153 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs9972693 chr16 28859802 Intron 6 22287 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs7187333 chr16 28865916 Intron 7 28401 CEU:1.0;0.959, CHB:1.0;0.588 LEAD_SNP rs7498665 chr16 28883241 Coding 5b ASSOCIATION 19079260 Body mass index 9.52287874528 SH2B1 ASSOCIATION 19079260 Weight 9.0 SH2B1 ASSOCIATION 19079261 Body mass index 10.3010299957 SH2B1 FUNCTIONAL_SNP rs7198606 chr16 28875122 Exon,non-coding 2b 8119 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11864107 chr16 28885931 Intergenic 2b 2690 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8055138 chr16 28891465 Intron 2b 8224 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4788095 chr16 28831359 Intergenic 4 51882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs12325278 chr16 28848818 Intergenic 5a 34423 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4788100 chr16 28864673 Intron 5b 18568 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4788102 chr16 28873398 Intron 5b 9843 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8055982 chr16 28881202 Intron 5b 2039 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3888190 chr16 28889486 Intergenic 5b 6245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12444171 chr16 28845251 Intron 5b 37990 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4451951 chr16 28836205 Intron 5b 47036 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4788101 chr16 28867804 Intron 6 15437 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4788099 chr16 28855727 Intron 6 27514 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9972768 chr16 28861734 Intron 6 21507 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2008514 chr16 28825605 Intron 6 57636 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8062405 chr16 28837906 Intron 6 45335 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs7205323 chr16 28865892 Intron 6 17349 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9972693 chr16 28859802 Intron 6 23439 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7359397 chr16 28885659 Intergenic 5b ASSOCIATION 20935630 Body mass index 19.6989700043 SH2B1 FUNCTIONAL_SNP rs7498665 chr16 28883241 Coding 5b 2418 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7198606 chr16 28875122 Exon,non-coding 2b 10537 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7187776 chr16 28857645 Exon,non-coding 4 28014 CEU:0.955;0.912, CHB:1.0;0.553 FUNCTIONAL_SNP rs12928404 chr16 28847246 Intron 2b 38413 CEU:1.0;0.959 FUNCTIONAL_SNP rs11864107 chr16 28885931 Intergenic 2b 272 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8055138 chr16 28891465 Intron 2b 5806 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8049439 chr16 28837515 Intron 2b 48144 CEU:1.0;0.959, CHB:1.0;0.588 FUNCTIONAL_SNP rs4788095 chr16 28831359 Intergenic 4 54300 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12325278 chr16 28848818 Intergenic 5a 36841 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4788100 chr16 28864673 Intron 5b 20986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4788102 chr16 28873398 Intron 5b 12261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8061590 chr16 28895130 Intron 5b 9471 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8055982 chr16 28881202 Intron 5b 4457 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3888190 chr16 28889486 Intergenic 5b 3827 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12444171 chr16 28845251 Intron 5b 40408 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12443881 chr16 28841777 Intron 5b 43882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4451951 chr16 28836205 Intron 5b 49454 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4788101 chr16 28867804 Intron 6 17855 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4788099 chr16 28855727 Intron 6 29932 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9972768 chr16 28861734 Intron 6 23925 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7498555 chr16 28893571 Intron 6 7912 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2008514 chr16 28825605 Intron 6 60054 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8062405 chr16 28837906 Intron 6 47753 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7205323 chr16 28865892 Intron 6 19767 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12325113 chr16 28848668 Intergenic 6 36991 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9972693 chr16 28859802 Intron 6 25857 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7187333 chr16 28865916 Intron 7 19743 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4787483 chr16 29885447 Intron 5b ASSOCIATION 19260139 Anthropometric traits 5.69897000434 SEZ6L2 LEAD_SNP rs7186852 chr16 30635659 Intergenic 5a ASSOCIATION 19838193 Systemic lupus erythematosus 6.52287874528 ZNF689 - PRR14 FUNCTIONAL_SNP rs7194347 chr16 30645644 Intergenic 2a 9985 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.828 FUNCTIONAL_SNP rs7197475 chr16 30642867 Intergenic 6 7208 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7187071 chr16 30644567 Intergenic 6 8908 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7197475 chr16 30642867 Intergenic 6 ASSOCIATION 19838193 Systemic lupus erythematosus 7.52287874528 ZNF689 - PRR14 FUNCTIONAL_SNP rs7194347 chr16 30645644 Intergenic 2a 2777 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.828 FUNCTIONAL_SNP rs7186852 chr16 30635659 Intergenic 5a 7208 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7187071 chr16 30644567 Intergenic 6 1700 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10782001 chr16 30942625 Intron 5b ASSOCIATION 20953189 Psoriasis 9.04575749056 FBXL19 FUNCTIONAL_SNP rs2305880 chr16 30999462 Coding 5b 56837 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs6950 chr16 30995669 Exon,non-coding 5b 53044 CEU:1.0;0.829, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.897 FUNCTIONAL_SNP rs11076 chr16 30995528 Exon,non-coding 5b 52903 CEU:1.0;0.909, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs13708 chr16 31000809 Exon,non-coding 5b 58184 CEU:1.0;0.841, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.948 FUNCTIONAL_SNP rs8060857 chr16 31002720 Exon,non-coding 5b 60095 CEU:1.0;0.87, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.94;0.884 FUNCTIONAL_SNP rs3813020 chr16 30934075 Intergenic 2a 8550 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;1.0 FUNCTIONAL_SNP rs11150601 chr16 30977799 Intron 2b 35174 CEU:1.0;0.83, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.89 FUNCTIONAL_SNP rs10782002 chr16 30946506 Intron 2b 3881 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs1458202 chr16 30953202 Intron 4 10577 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4889599 chr16 30968589 Intergenic 4 25964 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs2054213 chr16 30971810 Intron 5b 29185 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs11150600 chr16 30940331 Intron 5b 2294 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12928852 chr16 30943988 Intron 5b 1363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2305884 chr16 30970741 Intron 5b 28116 CEU:1.0;0.828, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs897986 chr16 30980902 Intron 5b 38277 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs11640534 chr16 30949515 Intron 6 6890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7206511 chr16 30950352 Intron 7 7727 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs10871454 chr16 31048079 Intron 7 ASSOCIATION 18535201 Warfarin maintenance dose 33.3010299957 STX4 FUNCTIONAL_SNP rs9939417 chr16 31053467 Exon,non-coding 5b 5388 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11150604 chr16 31037020 Intergenic 6 11059 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9923231 chr16 31107689 Intergenic 5a ASSOCIATION 20833655 Warfarin maintenance dose 30.0457574906 VKORC1 ASSOCIATION 19300499 Warfarin maintenance dose 180.522878745 VKORC1 FUNCTIONAL_SNP rs9934438 chr16 31104878 Intron 4 2811 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9888739 chr16 31313253 Intron 5b ASSOCIATION 21408207 Systemic lupus erythematosus 15.0 ITGAM ASSOCIATION 18204446 Systemic lupus erythematosus 22.6989700043 ITGAM FUNCTIONAL_SNP rs9888879 chr16 31310372 Intron 4 2881 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9938063 chr16 31302938 Intron 5b 10315 CEU:1.0;1.0 FUNCTIONAL_SNP rs7190807 chr16 31301910 Intron 5b 11343 CEU:1.0;1.0, YRI:1.0;0.777 FUNCTIONAL_SNP rs7190018 chr16 31301478 Intron 6 11775 CEU:1.0;1.0 FUNCTIONAL_SNP rs6565227 chr16 31328991 Intron 6 15738 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7184677 chr16 31289066 Intron 7 24187 CEU:1.0;1.0 FUNCTIONAL_SNP rs11860650 chr16 31326706 Intron 7 13453 CEU:1.0;1.0 FUNCTIONAL_SNP rs9928372 chr16 31312053 Intron 7 1200 CEU:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs9936831 chr16 31287148 Intron 7 26105 CEU:1.0;1.0 FUNCTIONAL_SNP rs13338069 chr16 31299474 Intron 7 13779 CEU:1.0;1.0 FUNCTIONAL_SNP rs6565228 chr16 31329280 Intron 7 16027 CEU:1.0;0.848 FUNCTIONAL_SNP rs12928810 chr16 31311715 Intron 7 1538 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs11150610 chr16 31334236 Intron 5a ASSOCIATION 19165918 Systemic lupus erythematosus 5.69897000434 ITGAM LEAD_SNP rs11574637 chr16 31368874 Intron 5b ASSOCIATION 18204098 Systemic lupus erythematosus 10.5228787453 ITGAX LEAD_SNP rs17281813 chr16 49750790 Intron 7 ASSOCIATION 18821565 Inattentive symptoms 5.52287874528 ZNF423 LEAD_SNP rs9302752 chr16 50719103 Intergenic 2b ASSOCIATION 20018961 Leprosy 39.3979400087 SNX20 - NOD2 FUNCTIONAL_SNP rs1981760 chr16 50723074 Intergenic 5a 3971 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9933594 chr16 50724087 Intergenic 5b 4984 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17221417 chr16 50739582 Intron 4 ASSOCIATION 17554300 Crohn's disease 10.3979400087 NOD2 LEAD_SNP rs5743289 chr16 50756774 Intron 6 ASSOCIATION 18758464 Inflammatory bowel disease 9.39794000867 NOD2 ASSOCIATION 17804789 Crohn's disease 16.2218487496 NOD2 ASSOCIATION 17447842 Crohn's disease 6.0 NOD2 LEAD_SNP rs2076756 chr16 50756881 Intron 7 ASSOCIATION 21102463 Crohn's disease 68.3979400087 NOD2 ASSOCIATION 17684544 Crohn's disease 21.0 NOD2 ASSOCIATION 17435756 Crohn's disease 13.15490196 NOD2 ASSOCIATION 17068223 Inflammatory bowel disease 9.30102999566 NOD2 FUNCTIONAL_SNP rs2066842 chr16 50744624 Coding 5b 12257 CEU:1.0;0.958 FUNCTIONAL_SNP rs2066843 chr16 50745199 Coding 7 11682 CEU:1.0;1.0 FUNCTIONAL_SNP rs5743266 chr16 50731096 Exon,non-coding 5b 25785 CEU:1.0;0.918 FUNCTIONAL_SNP rs17221417 chr16 50739582 Intron 4 17299 CEU:1.0;1.0 FUNCTIONAL_SNP rs13380741 chr16 50742938 Intron 5b 13943 CEU:1.0;1.0 FUNCTIONAL_SNP rs2076753 chr16 50733374 Intron 5b 23507 CEU:1.0;0.916 FUNCTIONAL_SNP rs17313265 chr16 50747704 Intron 5b 9177 CEU:1.0;1.0 FUNCTIONAL_SNP rs11649521 chr16 50738830 Intron 6 18051 CEU:1.0;1.0 LEAD_SNP rs10521222 chr16 51158710 Intergenic 7 ASSOCIATION 21300955 C-reactive protein 12.0457574906 CYLD - SALL1 LEAD_SNP rs4131099 chr16 51330531 Intergenic 7 ASSOCIATION 20691247 Personality dimensions 5.39794000867 UNGP1 - TOX3 FUNCTIONAL_SNP rs2729607 chr16 51346929 Intergenic 5b 16398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs8053723 chr16 51340852 Intergenic 6 10321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs7188062 chr16 51337970 Intergenic 6 7439 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 LEAD_SNP rs1362756 chr16 51458290 Intergenic 6 ASSOCIATION 20548946 Optic disc parameters 8.30102999566 UNGP1 - TOX3 FUNCTIONAL_SNP rs4784295 chr16 51471432 Intergenic 5b 13142 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7196852 chr16 51462823 Intergenic 5b 4533 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1420993 chr16 51464898 Intergenic 5b 6608 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs4613061 chr16 51461863 Intergenic 6 3573 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8055396 chr16 51466140 Intergenic 6 7850 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7187736 chr16 51488206 Intergenic 7 29916 CEU:1.0;0.832 FUNCTIONAL_SNP rs8053277 chr16 51469726 Intergenic 7 11436 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1345467 chr16 51482321 Intergenic 7 24031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.55 FUNCTIONAL_SNP rs1073990 chr16 51479949 Intergenic 7 21659 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.526 FUNCTIONAL_SNP rs8050675 chr16 51466372 Intergenic 7 8082 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs3803662 chr16 52586341 Exon,non-coding 7 ASSOCIATION 20872241 Breast cancer 6.39794000867 TOX3 - CHD9 ASSOCIATION 20453838 Breast cancer 14.5228787453 TOX3 - CHD9 ASSOCIATION 19330030 Breast cancer 9.0 TOX3 - CHD9 ASSOCIATION 17529967 Breast cancer 36.0 TOX3 - CHD9 ASSOCIATION 17529974 Breast cancer 18.2218487496 TOX3 - CHD9 FUNCTIONAL_SNP rs4784227 chr16 52599188 Intron 4 12847 CEU:1.0;0.864 FUNCTIONAL_SNP rs17271951 chr16 52538040 Intron 6 48301 CEU:0.953;0.908 FUNCTIONAL_SNP rs4784223 chr16 52575907 Intron 6 10434 CEU:1.0;0.954, CHB:1.0;0.65, JPT:0.901;0.812, YRI:0.954;0.656 FUNCTIONAL_SNP rs1362548 chr16 52563951 Intron 6 22390 CEU:1.0;0.952, YRI:1.0;0.72 FUNCTIONAL_SNP rs3095604 chr16 52581979 Intergenic 7 4362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4784227 chr16 52599188 Intron 4 ASSOCIATION 20585626 Breast cancer 28.0 TOX3 - CHD9 FUNCTIONAL_SNP rs3803662 chr16 52586341 Exon,non-coding 7 12847 CEU:1.0;0.864 FUNCTIONAL_SNP rs17271951 chr16 52538040 Intron 6 61148 CEU:1.0;0.864, CHB:1.0;0.806, JPT:0.84;0.612, YRI:1.0;1.0 FUNCTIONAL_SNP rs1362548 chr16 52563951 Intron 6 35237 CEU:1.0;0.816 FUNCTIONAL_SNP rs4784223 chr16 52575907 Intron 6 23281 CEU:1.0;0.825 FUNCTIONAL_SNP rs3095604 chr16 52581979 Intergenic 7 17209 CEU:1.0;0.864 LEAD_SNP rs3112612 chr16 52635164 Intron 7 ASSOCIATION 21263130 Breast cancer 9.39794000867 TOX3 - CHD9 FUNCTIONAL_SNP rs3112617 chr16 52631717 Intron 2b 3447 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11075551 chr16 52631964 Intron 4 3200 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3104768 chr16 52626396 Intron 5b 8768 CEU:1.0;0.961, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs3104793 chr16 52641186 Intergenic 5b 6022 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.571 FUNCTIONAL_SNP rs3104784 chr16 52636365 Intron 6 1201 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.516 FUNCTIONAL_SNP rs3112620 chr16 52630896 Intron 6 4268 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;0.567 FUNCTIONAL_SNP rs3112623 chr16 52627526 Intron 6 7638 CEU:1.0;0.961, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs7203671 chr16 52630145 Intron 6 5019 CEU:1.0;0.961, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3104766 chr16 52624535 Intron 6 10629 CEU:0.919;0.845, CHB:1.0;0.924, JPT:1.0;0.937 FUNCTIONAL_SNP rs3104774 chr16 52629702 Intron 7 5462 CEU:1.0;0.961, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3104775 chr16 52629827 Intron 7 5337 CEU:1.0;0.959, CHB:1.0;0.922, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8046994 chr16 52643924 Intergenic 7 8760 CEU:1.0;0.961, YRI:0.906;0.625 FUNCTIONAL_SNP rs3104788 chr16 52638503 Intron 7 3339 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.862 FUNCTIONAL_SNP rs3104797 chr16 52644450 Intergenic 7 9286 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;0.873, YRI:1.0;0.577 FUNCTIONAL_SNP rs3104798 chr16 52644895 Intergenic 7 9731 CEU:0.96;0.922, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.577 FUNCTIONAL_SNP rs12929797 chr16 52632944 Intron 7 2220 CEU:1.0;0.961 FUNCTIONAL_SNP rs4290467 chr16 52638759 Intron 7 3595 CEU:1.0;0.956 FUNCTIONAL_SNP rs3112625 chr16 52625552 Intron 7 9612 CEU:1.0;0.961, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs12597685 chr16 52637780 Intron 7 2616 CEU:1.0;0.961 FUNCTIONAL_SNP rs1112135 chr16 52639755 Intron 7 4591 CEU:1.0;0.961 FUNCTIONAL_SNP rs12920540 chr16 52625613 Intron 7 9551 CEU:1.0;0.924 FUNCTIONAL_SNP rs7192828 chr16 52628493 Intron 7 6671 CEU:1.0;0.917 FUNCTIONAL_SNP rs3104767 chr16 52624738 Intron 7 10426 CEU:1.0;0.961, CHB:1.0;0.924, JPT:1.0;1.0, YRI:1.0;0.577 LEAD_SNP rs6499640 chr16 53769677 Intron 7 ASSOCIATION 19079260 Body mass index 12.3979400087 FTO ASSOCIATION 19079260 Weight 13.2218487496 FTO FUNCTIONAL_SNP rs7206010 chr16 53755177 Intron 5a 14500 CEU:1.0;0.957, CHB:1.0;0.834, JPT:1.0;0.92, YRI:0.96;0.853 FUNCTIONAL_SNP rs7203521 chr16 53769293 Intron 7 384 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1421085 chr16 53800954 Intron 6 ASSOCIATION 19151714 Obesity 28.0 FTO FUNCTIONAL_SNP rs3751812 chr16 53818460 Intron 5b 17506 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs12149832 chr16 53842908 Intron 6 41954 CEU:0.96;0.922, CHB:1.0;1.0, JPT:0.914;0.835, YRI:1.0;0.825 FUNCTIONAL_SNP rs1558902 chr16 53803574 Intron 7 2620 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 LEAD_SNP rs1558902 chr16 53803574 Intron 7 ASSOCIATION 21544081 Obesity 7.0 FTO ASSOCIATION 20935630 Body mass index 119.301029996 FTO ASSOCIATION 20421936 Obesity (extreme) 12.15490196 FTO ASSOCIATION 19557197 Waist circumference 18.3010299957 FTO FUNCTIONAL_SNP rs7202116 chr16 53821615 Intron 2b 18041 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17817964 chr16 53828066 Intron 2b 24492 CEU:1.0;0.963, CHB:1.0;1.0, JPT:1.0;0.851, YRI:1.0;1.0 FUNCTIONAL_SNP rs9940128 chr16 53800754 Intron 4 2820 CEU:1.0;0.924, CHB:1.0;0.576, JPT:1.0;0.626 FUNCTIONAL_SNP rs9940646 chr16 53800629 Intron 4 2945 CEU:1.0;0.892, CHB:1.0;0.577, JPT:1.0;0.684 FUNCTIONAL_SNP rs1121980 chr16 53809247 Intron 4 5673 CEU:1.0;0.924, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs8050136 chr16 53816275 Intron 4 12701 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9939973 chr16 53800568 Intron 4 3006 CEU:1.0;0.924, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9936385 chr16 53819169 Intron 5b 15595 CEU:0.954;0.836, CHB:1.0;0.876, JPT:1.0;1.0 FUNCTIONAL_SNP rs3751812 chr16 53818460 Intron 5b 14886 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9923233 chr16 53819198 Intron 5b 15624 CEU:0.957;0.915 FUNCTIONAL_SNP rs17817449 chr16 53813367 Intron 5b 9793 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8051591 chr16 53816752 Intron 6 13178 CEU:0.961;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9937053 chr16 53799507 Intron 6 4067 CEU:1.0;1.0, CHB:1.0;0.623, JPT:1.0;0.655 FUNCTIONAL_SNP rs1421085 chr16 53800954 Intron 6 2620 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs7193144 chr16 53810686 Intron 6 7112 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12149832 chr16 53842908 Intron 6 39334 CEU:0.963;0.926, CHB:1.0;1.0, JPT:1.0;0.921, YRI:1.0;0.849 FUNCTIONAL_SNP rs9932754 chr16 53830491 Intron 6 26917 CEU:0.96;0.854 FUNCTIONAL_SNP rs9930506 chr16 53830465 Intron 7 26891 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.626 FUNCTIONAL_SNP rs11075985 chr16 53805207 Intron 7 1633 CEU:1.0;0.894, CHB:1.0;0.577, JPT:1.0;0.684 FUNCTIONAL_SNP rs9923544 chr16 53801985 Intron 7 1589 CEU:1.0;0.928, CHB:1.0;0.598, JPT:1.0;0.687 FUNCTIONAL_SNP rs9922708 chr16 53831146 Intron 7 27572 CEU:0.961;0.857, CHB:1.0;0.598, JPT:1.0;0.643 FUNCTIONAL_SNP rs11075989 chr16 53819877 Intron 7 16303 CEU:0.957;0.915, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11075990 chr16 53819893 Intron 7 16319 CEU:0.962;0.925, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9939609 chr16 53820527 Intron 7 16953 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9928094 chr16 53799905 Intron 7 3669 CEU:1.0;0.927, CHB:1.0;0.574, JPT:1.0;0.691 FUNCTIONAL_SNP rs9930501 chr16 53830452 Intron 7 26878 CEU:0.96;0.855, CHB:1.0;0.594, JPT:1.0;0.642 FUNCTIONAL_SNP rs9935401 chr16 53816838 Intron 7 13264 CEU:0.963;0.926, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7201850 chr16 53821862 Intron 7 18288 CEU:0.959;0.883, CHB:1.0;0.574, JPT:1.0;0.621 FUNCTIONAL_SNP rs9922619 chr16 53831771 Intron 7 28197 CEU:0.959;0.851 FUNCTIONAL_SNP rs7185735 chr16 53822651 Intron 7 19077 CEU:1.0;0.963, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9923147 chr16 53801549 Intron 7 2025 CEU:1.0;0.928, CHB:1.0;0.598, JPT:1.0;0.687 FUNCTIONAL_SNP rs11642841 chr16 53845487 Intron 7 41913 CEU:0.925;0.855, YRI:1.0;0.826 FUNCTIONAL_SNP rs9930333 chr16 53799977 Intron 7 3597 CEU:1.0;0.924, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9941349 chr16 53825488 Intron 7 21914 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9931494 chr16 53827179 Intron 7 23605 CEU:0.961;0.889, CHB:1.0;0.598, JPT:1.0;0.687 FUNCTIONAL_SNP rs8043757 chr16 53813450 Intron 7 9876 CEU:0.962;0.926, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1121980 chr16 53809247 Intron 4 ASSOCIATION 18454148 Body mass index 7.39794000867 FTO ASSOCIATION 18159244 Obesity (early onset extreme) 7.0 FTO FUNCTIONAL_SNP rs9940128 chr16 53800754 Intron 4 8493 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:0.925;0.825 FUNCTIONAL_SNP rs9940646 chr16 53800629 Intron 4 8618 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.924;0.822 FUNCTIONAL_SNP rs9939973 chr16 53800568 Intron 4 8679 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.925;0.825 FUNCTIONAL_SNP rs9937053 chr16 53799507 Intron 6 9740 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.924;0.822 FUNCTIONAL_SNP rs11075985 chr16 53805207 Intron 7 4040 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.893 FUNCTIONAL_SNP rs9923544 chr16 53801985 Intron 7 7262 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.925;0.825 FUNCTIONAL_SNP rs9928094 chr16 53799905 Intron 7 9342 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.89 FUNCTIONAL_SNP rs9923147 chr16 53801549 Intron 7 7698 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.925;0.825 LEAD_SNP rs17817449 chr16 53813367 Intron 5b ASSOCIATION 21552555 Obesity 11.6989700043 FTO FUNCTIONAL_SNP rs7202116 chr16 53821615 Intron 2b 8248 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.62 FUNCTIONAL_SNP rs17817964 chr16 53828066 Intron 2b 14699 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.842 FUNCTIONAL_SNP rs9940128 chr16 53800754 Intron 4 12613 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.626, YRI:0.913;0.642 FUNCTIONAL_SNP rs9940646 chr16 53800629 Intron 4 12738 CEU:0.956;0.811, CHB:1.0;0.552, JPT:1.0;0.668, YRI:0.911;0.637 FUNCTIONAL_SNP rs1121980 chr16 53809247 Intron 4 4120 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671, YRI:0.956;0.679 FUNCTIONAL_SNP rs8050136 chr16 53816275 Intron 4 2908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.771 FUNCTIONAL_SNP rs9939973 chr16 53800568 Intron 4 12799 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671, YRI:0.913;0.643 FUNCTIONAL_SNP rs3751812 chr16 53818460 Intron 5b 5093 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9923233 chr16 53819198 Intron 5b 5831 CEU:1.0;1.0 FUNCTIONAL_SNP rs9936385 chr16 53819169 Intron 5b 5802 CEU:1.0;0.915, CHB:1.0;0.862, JPT:1.0;1.0, YRI:1.0;0.634 FUNCTIONAL_SNP rs8051591 chr16 53816752 Intron 6 3385 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.771 FUNCTIONAL_SNP rs9937053 chr16 53799507 Intron 6 13860 CEU:0.956;0.914, CHB:1.0;0.599, JPT:1.0;0.636, YRI:0.911;0.637 FUNCTIONAL_SNP rs1421085 chr16 53800954 Intron 6 12413 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs7193144 chr16 53810686 Intron 6 2681 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.856 FUNCTIONAL_SNP rs12149832 chr16 53842908 Intron 6 29541 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs9932754 chr16 53830491 Intron 6 17124 CEU:0.958;0.846 FUNCTIONAL_SNP rs9930506 chr16 53830465 Intron 7 17098 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.626 FUNCTIONAL_SNP rs11075985 chr16 53805207 Intron 7 8160 CEU:1.0;0.889, CHB:1.0;0.552, JPT:1.0;0.668, YRI:0.957;0.706 FUNCTIONAL_SNP rs9923544 chr16 53801985 Intron 7 11382 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671, YRI:0.913;0.643 FUNCTIONAL_SNP rs9922708 chr16 53831146 Intron 7 17779 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.626 FUNCTIONAL_SNP rs11075989 chr16 53819877 Intron 7 6510 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.613 FUNCTIONAL_SNP rs11075990 chr16 53819893 Intron 7 6526 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.603 FUNCTIONAL_SNP rs9939609 chr16 53820527 Intron 7 7160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.62 FUNCTIONAL_SNP rs9928094 chr16 53799905 Intron 7 13462 CEU:0.958;0.846, CHB:1.0;0.549, JPT:1.0;0.671, YRI:0.911;0.68 FUNCTIONAL_SNP rs9930501 chr16 53830452 Intron 7 17085 CEU:0.958;0.847, CHB:1.0;0.571, JPT:1.0;0.625 FUNCTIONAL_SNP rs9935401 chr16 53816838 Intron 7 3471 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.771 FUNCTIONAL_SNP rs7201850 chr16 53821862 Intron 7 8495 CEU:0.959;0.883, CHB:1.0;0.574, JPT:1.0;0.621 FUNCTIONAL_SNP rs9922619 chr16 53831771 Intron 7 18404 CEU:0.957;0.843 FUNCTIONAL_SNP rs7185735 chr16 53822651 Intron 7 9284 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.62 FUNCTIONAL_SNP rs9923147 chr16 53801549 Intron 7 11818 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671, YRI:0.913;0.643 FUNCTIONAL_SNP rs11642841 chr16 53845487 Intron 7 32120 CEU:0.92;0.847 FUNCTIONAL_SNP rs9941349 chr16 53825488 Intron 7 12121 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9931494 chr16 53827179 Intron 7 13812 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs8043757 chr16 53813450 Intron 7 83 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs1558902 chr16 53803574 Intron 7 9793 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9930333 chr16 53799977 Intron 7 13390 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671, YRI:0.907;0.569 LEAD_SNP rs8050136 chr16 53816275 Intron 4 ASSOCIATION 21706003 Adiposity 25.5228787453 FTO ASSOCIATION 21037115 Body mass in chronic obstructive pulmonary disease 7.39794000867 FTO ASSOCIATION 19079260 Body mass index 47.0 FTO ASSOCIATION 19079260 Weight 35.3010299957 FTO ASSOCIATION 19056611 Type 2 diabetes 16.6989700043 FTO ASSOCIATION 18372903 Type 2 diabetes 5.15490195999 FTO ASSOCIATION 17463248 Type 2 diabetes 12.0 FTO ASSOCIATION 17463249 Type 2 diabetes 13.15490196 FTO FUNCTIONAL_SNP rs7202116 chr16 53821615 Intron 2b 5340 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs17817964 chr16 53828066 Intron 2b 11791 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.842 FUNCTIONAL_SNP rs9940128 chr16 53800754 Intron 4 15521 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.626, YRI:0.776;0.602 FUNCTIONAL_SNP rs9940646 chr16 53800629 Intron 4 15646 CEU:0.956;0.811, CHB:1.0;0.552, JPT:1.0;0.668, YRI:0.772;0.597 FUNCTIONAL_SNP rs1121980 chr16 53809247 Intron 4 7028 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671, YRI:0.81;0.633 FUNCTIONAL_SNP rs9939973 chr16 53800568 Intron 4 15707 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671, YRI:0.777;0.603 FUNCTIONAL_SNP rs9936385 chr16 53819169 Intron 5b 2894 CEU:1.0;0.915, CHB:1.0;0.862, JPT:1.0;1.0, YRI:0.955;0.776 FUNCTIONAL_SNP rs3751812 chr16 53818460 Intron 5b 2185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9923233 chr16 53819198 Intron 5b 2923 CEU:1.0;1.0 FUNCTIONAL_SNP rs17817449 chr16 53813367 Intron 5b 2908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.771 FUNCTIONAL_SNP rs8051591 chr16 53816752 Intron 6 477 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9937053 chr16 53799507 Intron 6 16768 CEU:0.956;0.914, CHB:1.0;0.599, JPT:1.0;0.636, YRI:0.773;0.597 FUNCTIONAL_SNP rs1421085 chr16 53800954 Intron 6 15321 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs7193144 chr16 53810686 Intron 6 5589 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.831 FUNCTIONAL_SNP rs12149832 chr16 53842908 Intron 6 26633 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs9932754 chr16 53830491 Intron 6 14216 CEU:0.958;0.846 FUNCTIONAL_SNP rs9930506 chr16 53830465 Intron 7 14190 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.626 FUNCTIONAL_SNP rs9922708 chr16 53831146 Intron 7 14871 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.626 FUNCTIONAL_SNP rs11075989 chr16 53819877 Intron 7 3602 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.786 FUNCTIONAL_SNP rs11075990 chr16 53819893 Intron 7 3618 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.794 FUNCTIONAL_SNP rs9939609 chr16 53820527 Intron 7 4252 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs9928094 chr16 53799905 Intron 7 16370 CEU:0.958;0.846, CHB:1.0;0.549, JPT:1.0;0.671, YRI:0.835;0.646 FUNCTIONAL_SNP rs9930501 chr16 53830452 Intron 7 14177 CEU:0.958;0.847, CHB:1.0;0.571, JPT:1.0;0.625 FUNCTIONAL_SNP rs9935401 chr16 53816838 Intron 7 563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7201850 chr16 53821862 Intron 7 5587 CEU:0.959;0.883, CHB:1.0;0.574, JPT:1.0;0.621, YRI:1.0;0.645 FUNCTIONAL_SNP rs9922619 chr16 53831771 Intron 7 15496 CEU:0.957;0.843 FUNCTIONAL_SNP rs7185735 chr16 53822651 Intron 7 6376 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs9923147 chr16 53801549 Intron 7 14726 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671, YRI:0.777;0.603 FUNCTIONAL_SNP rs9923544 chr16 53801985 Intron 7 14290 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671, YRI:0.777;0.603 FUNCTIONAL_SNP rs11642841 chr16 53845487 Intron 7 29212 CEU:0.92;0.847 FUNCTIONAL_SNP rs9941349 chr16 53825488 Intron 7 9213 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9931494 chr16 53827179 Intron 7 10904 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs11075985 chr16 53805207 Intron 7 11068 CEU:1.0;0.889, CHB:1.0;0.552, JPT:1.0;0.668, YRI:0.815;0.664 FUNCTIONAL_SNP rs8043757 chr16 53813450 Intron 7 2825 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs1558902 chr16 53803574 Intron 7 12701 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9930333 chr16 53799977 Intron 7 16298 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671, YRI:0.762;0.521 LEAD_SNP rs9939609 chr16 53820527 Intron 7 ASSOCIATION 21102462 Menarche (age at onset) 7.52287874528 FTO ASSOCIATION 19396169 Biomedical quantitative traits 6.69897000434 FTO ASSOCIATION 19079261 Body mass index 50.3979400087 FTO ASSOCIATION 17554300 Type 2 diabetes 6.69897000434 FTO ASSOCIATION 17434869 Body mass index 19.6989700043 FTO FUNCTIONAL_SNP rs7202116 chr16 53821615 Intron 2b 1088 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17817964 chr16 53828066 Intron 2b 7539 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.842 FUNCTIONAL_SNP rs9940128 chr16 53800754 Intron 4 19773 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.626 FUNCTIONAL_SNP rs9940646 chr16 53800629 Intron 4 19898 CEU:0.956;0.811, CHB:1.0;0.552, JPT:1.0;0.668 FUNCTIONAL_SNP rs1121980 chr16 53809247 Intron 4 11280 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs8050136 chr16 53816275 Intron 4 4252 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs9939973 chr16 53800568 Intron 4 19959 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9936385 chr16 53819169 Intron 5b 1358 CEU:1.0;0.915, CHB:1.0;0.862, JPT:1.0;1.0, YRI:0.959;0.883 FUNCTIONAL_SNP rs3751812 chr16 53818460 Intron 5b 2067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9923233 chr16 53819198 Intron 5b 1329 CEU:1.0;1.0 FUNCTIONAL_SNP rs17817449 chr16 53813367 Intron 5b 7160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.62 FUNCTIONAL_SNP rs8051591 chr16 53816752 Intron 6 3775 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs9937053 chr16 53799507 Intron 6 21020 CEU:0.956;0.914, CHB:1.0;0.599, JPT:1.0;0.636 FUNCTIONAL_SNP rs1421085 chr16 53800954 Intron 6 19573 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs7193144 chr16 53810686 Intron 6 9841 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.668 FUNCTIONAL_SNP rs12149832 chr16 53842908 Intron 6 22381 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs9932754 chr16 53830491 Intron 6 9964 CEU:0.958;0.846 FUNCTIONAL_SNP rs9930506 chr16 53830465 Intron 7 9938 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.626 FUNCTIONAL_SNP rs11075985 chr16 53805207 Intron 7 15320 CEU:1.0;0.889, CHB:1.0;0.552, JPT:1.0;0.668 FUNCTIONAL_SNP rs9923544 chr16 53801985 Intron 7 18542 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9922708 chr16 53831146 Intron 7 10619 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.626 FUNCTIONAL_SNP rs11075989 chr16 53819877 Intron 7 650 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11075990 chr16 53819893 Intron 7 634 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9928094 chr16 53799905 Intron 7 20622 CEU:0.958;0.846, CHB:1.0;0.549, JPT:1.0;0.671 FUNCTIONAL_SNP rs9930501 chr16 53830452 Intron 7 9925 CEU:0.958;0.847, CHB:1.0;0.571, JPT:1.0;0.625 FUNCTIONAL_SNP rs9935401 chr16 53816838 Intron 7 3689 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.804 FUNCTIONAL_SNP rs7201850 chr16 53821862 Intron 7 1335 CEU:0.959;0.883, CHB:1.0;0.574, JPT:1.0;0.621, YRI:1.0;0.802 FUNCTIONAL_SNP rs9922619 chr16 53831771 Intron 7 11244 CEU:0.957;0.843 FUNCTIONAL_SNP rs7185735 chr16 53822651 Intron 7 2124 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9923147 chr16 53801549 Intron 7 18978 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs11642841 chr16 53845487 Intron 7 24960 CEU:0.92;0.847 FUNCTIONAL_SNP rs9930333 chr16 53799977 Intron 7 20550 CEU:0.958;0.849, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9941349 chr16 53825488 Intron 7 4961 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9931494 chr16 53827179 Intron 7 6652 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs8043757 chr16 53813450 Intron 7 7077 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.694 FUNCTIONAL_SNP rs1558902 chr16 53803574 Intron 7 16953 CEU:0.96;0.922, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs9941349 chr16 53825488 Intron 7 ASSOCIATION 19553259 Obesity (extreme) 11.2218487496 FTO FUNCTIONAL_SNP rs7202116 chr16 53821615 Intron 2b 3873 CEU:1.0;0.924, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs17817964 chr16 53828066 Intron 2b 2578 CEU:1.0;0.924, CHB:1.0;0.576, JPT:0.823;0.54 FUNCTIONAL_SNP rs9940128 chr16 53800754 Intron 4 24734 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.933 FUNCTIONAL_SNP rs9940646 chr16 53800629 Intron 4 24859 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1121980 chr16 53809247 Intron 4 16241 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8050136 chr16 53816275 Intron 4 9213 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9939973 chr16 53800568 Intron 4 24920 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9936385 chr16 53819169 Intron 5b 6319 CEU:0.952;0.83, CHB:1.0;0.626, JPT:1.0;0.571 FUNCTIONAL_SNP rs3751812 chr16 53818460 Intron 5b 7028 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9923233 chr16 53819198 Intron 5b 6290 CEU:0.954;0.91 FUNCTIONAL_SNP rs17817449 chr16 53813367 Intron 5b 12121 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs8051591 chr16 53816752 Intron 6 8736 CEU:0.958;0.88, CHB:1.0;0.551, JPT:1.0;0.671 FUNCTIONAL_SNP rs9937053 chr16 53799507 Intron 6 25981 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1421085 chr16 53800954 Intron 6 24534 CEU:0.959;0.885, CHB:1.0;0.576, JPT:0.906;0.602 FUNCTIONAL_SNP rs7193144 chr16 53810686 Intron 6 14802 CEU:1.0;0.924, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs12149832 chr16 53842908 Intron 6 17420 CEU:0.959;0.885, CHB:1.0;0.574, JPT:0.905;0.601 FUNCTIONAL_SNP rs9932754 chr16 53830491 Intron 6 5003 CEU:1.0;0.961 FUNCTIONAL_SNP rs9930506 chr16 53830465 Intron 7 4977 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.815 FUNCTIONAL_SNP rs11075985 chr16 53805207 Intron 7 20281 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9923544 chr16 53801985 Intron 7 23503 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9922708 chr16 53831146 Intron 7 5658 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.815 FUNCTIONAL_SNP rs11075989 chr16 53819877 Intron 7 5611 CEU:0.954;0.87, CHB:1.0;0.6, JPT:1.0;0.618 FUNCTIONAL_SNP rs11075990 chr16 53819893 Intron 7 5595 CEU:0.96;0.921, CHB:1.0;0.651, JPT:1.0;0.655 FUNCTIONAL_SNP rs9939609 chr16 53820527 Intron 7 4961 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9928094 chr16 53799905 Intron 7 25583 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9930501 chr16 53830452 Intron 7 4964 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.815 FUNCTIONAL_SNP rs9935401 chr16 53816838 Intron 7 8650 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs7201850 chr16 53821862 Intron 7 3626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.932 FUNCTIONAL_SNP rs9922619 chr16 53831771 Intron 7 6283 CEU:1.0;0.96 FUNCTIONAL_SNP rs7185735 chr16 53822651 Intron 7 2837 CEU:1.0;0.924, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs9923147 chr16 53801549 Intron 7 23939 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11642841 chr16 53845487 Intron 7 19999 CEU:0.918;0.811 FUNCTIONAL_SNP rs9930333 chr16 53799977 Intron 7 25511 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9931494 chr16 53827179 Intron 7 1691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8043757 chr16 53813450 Intron 7 12038 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 FUNCTIONAL_SNP rs1558902 chr16 53803574 Intron 7 21914 CEU:0.959;0.885, CHB:1.0;0.576, JPT:1.0;0.671 LEAD_SNP rs9930506 chr16 53830465 Intron 7 ASSOCIATION 17658951 Obesity-related traits 6.04575749056 FTO ASSOCIATION 17658951 Obesity-related traits 7.52287874528 FTO ASSOCIATION 17658951 Obesity-related traits 6.04575749056 FTO FUNCTIONAL_SNP rs9922708 chr16 53831146 Intron 7 681 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9930501 chr16 53830452 Intron 7 13 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9941349 chr16 53825488 Intron 7 4977 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.815 FUNCTIONAL_SNP rs9931494 chr16 53827179 Intron 7 3286 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.815 LEAD_SNP rs11642841 chr16 53845487 Intron 7 ASSOCIATION 20581827 Type 2 diabetes 7.52287874528 FTO FUNCTIONAL_SNP rs7202116 chr16 53821615 Intron 2b 23872 CEU:0.959;0.885 FUNCTIONAL_SNP rs17817964 chr16 53828066 Intron 2b 17421 CEU:0.962;0.891, YRI:1.0;0.826 FUNCTIONAL_SNP rs8050136 chr16 53816275 Intron 4 29212 CEU:0.92;0.847 FUNCTIONAL_SNP rs3751812 chr16 53818460 Intron 5b 27027 CEU:0.92;0.847, YRI:1.0;0.792 FUNCTIONAL_SNP rs9923233 chr16 53819198 Intron 5b 26289 CEU:0.913;0.833 FUNCTIONAL_SNP rs17817449 chr16 53813367 Intron 5b 32120 CEU:0.92;0.847 FUNCTIONAL_SNP rs8051591 chr16 53816752 Intron 6 28735 CEU:0.922;0.85 FUNCTIONAL_SNP rs1421085 chr16 53800954 Intron 6 44533 CEU:0.92;0.847, YRI:1.0;0.792 FUNCTIONAL_SNP rs9937053 chr16 53799507 Intron 6 45980 CEU:0.917;0.841 FUNCTIONAL_SNP rs7193144 chr16 53810686 Intron 6 34801 CEU:0.959;0.885 FUNCTIONAL_SNP rs12149832 chr16 53842908 Intron 6 2579 CEU:0.963;0.926, YRI:1.0;1.0 FUNCTIONAL_SNP rs9932754 chr16 53830491 Intron 6 14996 CEU:0.96;0.855 FUNCTIONAL_SNP rs9930501 chr16 53830452 Intron 7 15035 CEU:0.96;0.855 FUNCTIONAL_SNP rs9930506 chr16 53830465 Intron 7 15022 CEU:0.958;0.849 FUNCTIONAL_SNP rs9922708 chr16 53831146 Intron 7 14341 CEU:0.961;0.857 FUNCTIONAL_SNP rs11075989 chr16 53819877 Intron 7 25610 CEU:0.913;0.833 FUNCTIONAL_SNP rs11075990 chr16 53819893 Intron 7 25594 CEU:0.923;0.853 FUNCTIONAL_SNP rs9939609 chr16 53820527 Intron 7 24960 CEU:0.92;0.847 FUNCTIONAL_SNP rs9935401 chr16 53816838 Intron 7 28649 CEU:0.925;0.855 FUNCTIONAL_SNP rs7201850 chr16 53821862 Intron 7 23625 CEU:0.917;0.807 FUNCTIONAL_SNP rs9922619 chr16 53831771 Intron 7 13716 CEU:0.959;0.851 FUNCTIONAL_SNP rs7185735 chr16 53822651 Intron 7 22836 CEU:0.962;0.891 FUNCTIONAL_SNP rs9941349 chr16 53825488 Intron 7 19999 CEU:0.918;0.811 FUNCTIONAL_SNP rs9931494 chr16 53827179 Intron 7 18308 CEU:0.922;0.818 FUNCTIONAL_SNP rs8043757 chr16 53813450 Intron 7 32037 CEU:0.925;0.855 FUNCTIONAL_SNP rs1558902 chr16 53803574 Intron 7 41913 CEU:0.925;0.855, YRI:1.0;0.826 LEAD_SNP rs9921518 chr16 54494424 Intergenic 5b ASSOCIATION 21546767 Dialysis-related mortality 5.04575749056 IRX3 - CRNDE LEAD_SNP rs17291845 chr16 55245037 Intergenic 7 ASSOCIATION 21130836 Information processing speed 5.30102999566 IRX5 - IRX6 FUNCTIONAL_SNP rs12918335 chr16 55246303 Intergenic 5b 1266 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs17214578 chr16 55274930 Intergenic 5b 29893 CEU:1.0;0.813, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7191847 chr16 55256294 Intergenic 6 11257 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8060748 chr16 55234369 Intergenic 6 10668 CEU:1.0;0.936, CHB:1.0;1.0 FUNCTIONAL_SNP rs2001620 chr16 55255837 Intergenic 6 10800 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12921188 chr16 55271012 Intergenic 6 25975 CEU:1.0;1.0, CHB:1.0;1.0, YRI:0.863;0.655 FUNCTIONAL_SNP rs12925934 chr16 55233450 Intergenic 6 11587 CEU:1.0;0.936, CHB:1.0;1.0 FUNCTIONAL_SNP rs12920083 chr16 55246727 Intergenic 7 1690 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12919452 chr16 55232620 Intergenic 7 12417 CEU:1.0;0.936, CHB:1.0;1.0 FUNCTIONAL_SNP rs8061086 chr16 55234512 Intergenic 7 10525 CEU:1.0;0.936, CHB:1.0;1.0 FUNCTIONAL_SNP rs12920228 chr16 55232426 Intergenic 7 12611 CEU:1.0;0.936, CHB:1.0;1.0 FUNCTIONAL_SNP rs12934198 chr16 55235214 Intergenic 7 9823 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs12920308 chr16 55231933 Intergenic 7 13104 CEU:1.0;0.936, CHB:1.0;1.0 FUNCTIONAL_SNP rs17292278 chr16 55257211 Intergenic 7 12174 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17212494 chr16 55226745 Intergenic 7 18292 CEU:1.0;0.936, CHB:1.0;1.0 FUNCTIONAL_SNP rs12932559 chr16 55231740 Intergenic 7 13297 CEU:1.0;0.936, CHB:1.0;1.0 FUNCTIONAL_SNP rs12935507 chr16 55240951 Intergenic 7 4086 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12920285 chr16 55232099 Intergenic 7 12938 CEU:1.0;0.936, CHB:1.0;1.0 FUNCTIONAL_SNP rs12926302 chr16 55233680 Intergenic 7 11357 CEU:1.0;0.936, CHB:1.0;1.0 FUNCTIONAL_SNP rs12926964 chr16 55256888 Intergenic 7 11851 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2217332 chr16 56969148 Coding 4 ASSOCIATION 20694148 Metabolic syndrome 5.52287874528 HERPUD1 FUNCTIONAL_SNP rs247607 chr16 56963322 Intergenic 7 5826 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.919 FUNCTIONAL_SNP rs247608 chr16 56963468 Intergenic 7 5680 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9989419 chr16 56985139 Intergenic 5b ASSOCIATION 20864672 HDL cholesterol 32.0 HERPUD1 - CETP ASSOCIATION 20031538 HDL cholesterol 26.0457574906 HERPUD1 - CETP ASSOCIATION 18193043 HDL cholesterol 30.5228787453 HERPUD1 - CETP LEAD_SNP rs173539 chr16 56988044 Intergenic 7 ASSOCIATION 21386085 HDL Cholesterol - Triglycerides (HDLC-TG) 15.3010299957 HERPUD1 - CETP ASSOCIATION 21386085 Metabolic syndrome 8.04575749056 HERPUD1 - CETP ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 16.0 HERPUD1 - CETP ASSOCIATION 19060906 HDL cholesterol 74.3979400087 HERPUD1 - CETP FUNCTIONAL_SNP rs247617 chr16 56990716 Intergenic 5a 2672 CEU:1.0;0.957 FUNCTIONAL_SNP rs17231506 chr16 56994528 Intergenic 6 6484 CEU:1.0;1.0 FUNCTIONAL_SNP rs247616 chr16 56989590 Intergenic 7 1546 CEU:1.0;1.0 FUNCTIONAL_SNP rs3764261 chr16 56993324 Intergenic 7 5280 CEU:1.0;1.0 LEAD_SNP rs247616 chr16 56989590 Intergenic 7 ASSOCIATION 20838585 Cardiovascular disease risk factors 23.0 HERPUD1 - CETP FUNCTIONAL_SNP rs247617 chr16 56990716 Intergenic 5a 1126 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.902, YRI:1.0;0.942 FUNCTIONAL_SNP rs17231506 chr16 56994528 Intergenic 6 4938 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.821 FUNCTIONAL_SNP rs173539 chr16 56988044 Intergenic 7 1546 CEU:1.0;1.0 FUNCTIONAL_SNP rs3764261 chr16 56993324 Intergenic 7 3734 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.902, YRI:0.936;0.666 LEAD_SNP rs3764261 chr16 56993324 Intergenic 7 ASSOCIATION 21665990 Age-related macular degeneration 8.15490195999 HERPUD1 - CETP ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 12.5228787453 HERPUD1 - CETP ASSOCIATION 20686565 Blood lipid traits 380.84509804 HERPUD1 - CETP ASSOCIATION 20694148 Metabolic syndrome 48.0 HERPUD1 - CETP ASSOCIATION 20385819 Age-related macular degeneration 6.15490195999 HERPUD1 - CETP ASSOCIATION 19359809 LDL cholesterol 11.5228787453 HERPUD1 - CETP ASSOCIATION 19060910 HDL cholesterol 28.15490196 HERPUD1 - CETP ASSOCIATION 18454146 Waist circumference and related phenotypes 27.0 HERPUD1 - CETP ASSOCIATION 18193043 HDL cholesterol 56.6989700043 HERPUD1 - CETP FUNCTIONAL_SNP rs247617 chr16 56990716 Intergenic 5a 2608 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.744 FUNCTIONAL_SNP rs17231506 chr16 56994528 Intergenic 6 1204 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.84 FUNCTIONAL_SNP rs247616 chr16 56989590 Intergenic 7 3734 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.902, YRI:0.936;0.666 FUNCTIONAL_SNP rs173539 chr16 56988044 Intergenic 7 5280 CEU:1.0;1.0 LEAD_SNP rs1800775 chr16 56995236 Intergenic 4 ASSOCIATION 20031564 HDL cholesterol 92.3979400087 CETP ASSOCIATION 18193044 HDL cholesterol 73.0 CETP ASSOCIATION 17463246 Triglycerides 5.52287874528 CETP ASSOCIATION 17463246 Triglycerides 12.5228787453 CETP FUNCTIONAL_SNP rs1532624 chr16 57005479 Intron 4 10243 CEU:1.0;0.855 FUNCTIONAL_SNP rs1532625 chr16 57005301 Intron 4 10065 CEU:1.0;0.855 FUNCTIONAL_SNP rs7205804 chr16 57004889 Intron 5b 9653 CEU:1.0;0.887 FUNCTIONAL_SNP rs11508026 chr16 56999328 Intron 5b 4092 CEU:1.0;0.819 LEAD_SNP rs1864163 chr16 56997233 Intron 5b ASSOCIATION 18193043 HDL cholesterol 38.15490196 CETP LEAD_SNP rs9939224 chr16 57002732 Intron 5b ASSOCIATION 21386085 Metabolic syndrome (bivariate traits) 11.15490196 CETP FUNCTIONAL_SNP rs7499892 chr16 57006590 Intron 4 3858 CEU:1.0;1.0, CHB:0.826;0.586 FUNCTIONAL_SNP rs11076175 chr16 57006378 Intron 5a 3646 CEU:1.0;1.0, CHB:1.0;0.769, JPT:1.0;0.78 FUNCTIONAL_SNP rs7203984 chr16 56999258 Intron 5b 3474 CEU:1.0;0.938, CHB:1.0;0.579, JPT:1.0;0.6 LEAD_SNP rs1532624 chr16 57005479 Intron 4 ASSOCIATION 20066028 Cholesterol 19.5228787453 CETP ASSOCIATION 19060911 HDL cholesterol 93.0457574906 CETP FUNCTIONAL_SNP rs1800775 chr16 56995236 Intergenic 4 10243 CEU:1.0;0.855 FUNCTIONAL_SNP rs1532625 chr16 57005301 Intron 4 178 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7205804 chr16 57004889 Intron 5b 590 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.9, YRI:1.0;1.0 FUNCTIONAL_SNP rs11508026 chr16 56999328 Intron 5b 6151 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.899 LEAD_SNP rs7499892 chr16 57006590 Intron 4 ASSOCIATION 19260141 Biochemical measures 5.04575749056 CETP LEAD_SNP rs16965039 chr16 57047299 Intron 4 ASSOCIATION 21347282 Coronary heart disease 6.22184874962 NLRC5 LEAD_SNP rs37062 chr16 58567238 Intron 6 ASSOCIATION 20062063 Electrocardiographic traits 6.0 CNOT1 ASSOCIATION 19305408 QT interval 24.5228787453 CNOT1 FUNCTIONAL_SNP rs246258 chr16 58579274 Coding 6 12036 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs37036 chr16 58553348 Exon,non-coding 7 13890 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs27097 chr16 58664065 Intergenic 4 96827 CEU:1.0;0.942, CHB:1.0;0.837, JPT:1.0;0.871 FUNCTIONAL_SNP rs4784051 chr16 58637528 Intron 4 70290 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs28307 chr16 58577138 Intron 5a 9900 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7188697 chr16 58622178 Intron 5a 54940 CEU:0.935;0.821, CHB:1.0;0.889, JPT:1.0;1.0 FUNCTIONAL_SNP rs950843 chr16 58620885 Intron 5b 53647 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs37053 chr16 58558707 Intron 5b 8531 CEU:1.0;0.942, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs7203887 chr16 58640908 Intron 6 73670 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs244915 chr16 58667633 Intergenic 6 100395 CEU:1.0;1.0, CHB:1.0;0.881, JPT:1.0;0.929 FUNCTIONAL_SNP rs37055 chr16 58560775 Intron 6 6463 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8051650 chr16 58625756 Intron 6 58518 CEU:1.0;0.94, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs37060 chr16 58566304 Intron 6 934 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6499962 chr16 58610750 Intron 6 43512 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7199856 chr16 58584772 Intron 6 17534 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4784960 chr16 58627111 Intron 7 59873 CEU:1.0;0.942, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs12925702 chr16 58625385 Intron 7 58147 CEU:1.0;0.807, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2243463 chr16 58571189 Intron 7 3951 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9923491 chr16 58603176 Intron 7 35938 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1549607 chr16 58583975 Intron 7 16737 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7189568 chr16 58629135 Intron 7 61897 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9941290 chr16 58666389 Intergenic 7 99151 CEU:1.0;0.942, CHB:1.0;0.945, JPT:1.0;1.0 FUNCTIONAL_SNP rs9926577 chr16 58613431 Intron 7 46193 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs246196 chr16 58574253 Intron 7 7015 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs37054 chr16 58558989 Intron 7 8249 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs863433 chr16 58666712 Intergenic 7 99474 CEU:1.0;0.942, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs9935054 chr16 58630167 Intron 7 62929 CEU:1.0;0.942, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs7205071 chr16 58636871 Intron 7 69633 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12446307 chr16 58627636 Intron 7 60398 CEU:1.0;0.938, CHB:1.0;0.946, JPT:1.0;1.0 FUNCTIONAL_SNP rs2090727 chr16 58604161 Intron 7 36923 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4485352 chr16 58601410 Intron 7 34172 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8049393 chr16 58630414 Intron 7 63176 CEU:1.0;0.942, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs7188697 chr16 58622178 Intron 5a ASSOCIATION 19305409 QT interval 24.15490196 CNOT1 FUNCTIONAL_SNP rs246258 chr16 58579274 Coding 6 42904 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs37036 chr16 58553348 Exon,non-coding 7 68830 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs4784051 chr16 58637528 Intron 4 15350 CEU:0.953;0.908, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs28307 chr16 58577138 Intron 5a 45040 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs950843 chr16 58620885 Intron 5b 1293 CEU:0.949;0.9, CHB:1.0;0.902, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs37053 chr16 58558707 Intron 5b 63471 CEU:0.952;0.907, CHB:1.0;0.867, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs7203887 chr16 58640908 Intron 6 18730 CEU:0.953;0.908, CHB:1.0;0.909, JPT:1.0;1.0, YRI:1.0;0.856 FUNCTIONAL_SNP rs8051650 chr16 58625756 Intron 6 3578 CEU:0.951;0.905, CHB:1.0;0.909, JPT:1.0;1.0, YRI:1.0;0.856 FUNCTIONAL_SNP rs37060 chr16 58566304 Intron 6 55874 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs7199856 chr16 58584772 Intron 6 37406 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs6499962 chr16 58610750 Intron 6 11428 CEU:0.949;0.9, CHB:1.0;0.902, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs4784960 chr16 58627111 Intron 7 4933 CEU:0.953;0.908, CHB:1.0;0.867, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs2243463 chr16 58571189 Intron 7 50989 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs9923491 chr16 58603176 Intron 7 19002 CEU:0.953;0.908, CHB:1.0;0.909, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs1549607 chr16 58583975 Intron 7 38203 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs7189568 chr16 58629135 Intron 7 6957 CEU:0.952;0.907, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs9941290 chr16 58666389 Intergenic 7 44211 CEU:0.953;0.908, CHB:1.0;0.902, JPT:1.0;1.0, YRI:1.0;0.847 FUNCTIONAL_SNP rs9926577 chr16 58613431 Intron 7 8747 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs246196 chr16 58574253 Intron 7 47925 CEU:0.953;0.908, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs37054 chr16 58558989 Intron 7 63189 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs9935054 chr16 58630167 Intron 7 7989 CEU:0.953;0.908, CHB:1.0;0.867, JPT:1.0;1.0, YRI:1.0;0.856 FUNCTIONAL_SNP rs7205071 chr16 58636871 Intron 7 14693 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs12446307 chr16 58627636 Intron 7 5458 CEU:0.951;0.904, CHB:1.0;0.867, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs2090727 chr16 58604161 Intron 7 18017 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs4485352 chr16 58601410 Intron 7 20768 CEU:0.953;0.908, CHB:1.0;0.909, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs8049393 chr16 58630414 Intron 7 8236 CEU:0.949;0.9, CHB:1.0;0.905, JPT:1.0;1.0, YRI:1.0;0.854 LEAD_SNP rs12600277 chr16 58759332 Intron 6 ASSOCIATION 21223598 Aortic root size 5.52287874528 GOT2 LEAD_SNP rs2639889 chr16 61123147 Intergenic 6 ASSOCIATION 17903295 Morbidity-free survival 6.04575749056 RPS27AP16 - CDH8 LEAD_SNP rs11645366 chr16 62377153 Intergenic 6 ASSOCIATION 21602797 Cystic fibrosis severity 5.15490195999 CDH8 - RPS15AP34 FUNCTIONAL_SNP rs11075470 chr16 62378896 Intergenic 7 1743 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1381102 chr16 63955447 Intergenic 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.22184874962 RPS15AP34 - CDH11 FUNCTIONAL_SNP rs384130 chr16 63957883 Intergenic 5b 2436 CEU:1.0;0.962, CHB:0.9;0.81, JPT:1.0;0.903, YRI:1.0;1.0 FUNCTIONAL_SNP rs9926808 chr16 63960657 Intergenic 6 5210 CEU:1.0;0.962, CHB:0.902;0.813, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs9302557 chr16 63961459 Intergenic 6 6012 CEU:1.0;0.925, CHB:0.95;0.86, JPT:1.0;0.903, YRI:1.0;0.889 FUNCTIONAL_SNP rs374572 chr16 63956233 Intergenic 6 786 CEU:1.0;0.962, CHB:1.0;0.907, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs454483 chr16 63957736 Intergenic 6 2289 CEU:1.0;0.961, CHB:1.0;0.904, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs8058874 chr16 63959403 Intergenic 6 3956 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs8056081 chr16 63963839 Intergenic 7 8392 CEU:0.96;0.886, CHB:0.898;0.806, JPT:1.0;0.95, YRI:1.0;0.929 LEAD_SNP rs3729639 chr16 67225501 Intergenic 4 ASSOCIATION 21347282 Coronary heart disease 10.6989700043 E2F4;EXOC3L LEAD_SNP rs12449157 chr16 67708897 Exon,non-coding 5b ASSOCIATION 20864672 HDL cholesterol 6.69897000434 GFOD2 FUNCTIONAL_SNP rs11553287 chr16 67905407 Exon,non-coding 4 196510 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7199443 chr16 67841129 Exon,non-coding 4 132232 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;0.691 FUNCTIONAL_SNP rs7187476 chr16 67699948 Intron 4 8949 CEU:1.0;0.906, CHB:1.0;0.658, JPT:1.0;1.0, YRI:0.934;0.819 FUNCTIONAL_SNP rs7198357 chr16 67884619 Intron 6 175722 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;0.691 FUNCTIONAL_SNP rs28563117 chr16 67782130 Intron 6 73233 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2271294 chr16 67902326 Intron 6 193429 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs6499143 chr16 67874264 Intergenic 6 165367 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8051587 chr16 67796315 Intron 7 87418 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13334918 chr16 67901343 Intron 7 192446 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9928531 chr16 67833171 Intron 7 124274 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7191129 chr16 67801391 Intron 7 92494 CEU:0.917;0.84, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;0.932 FUNCTIONAL_SNP rs2008173 chr16 67856240 Intron 7 147343 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 LEAD_SNP rs2271293 chr16 67902070 Intron 6 ASSOCIATION 19060911 HDL cholesterol 15.096910013 NUTF2 ASSOCIATION 19060906 HDL cholesterol 12.0457574906 NUTF2 LEAD_SNP rs8060686 chr16 67911517 Coding 5b ASSOCIATION 21347282 Coronary heart disease 5.09691001301 EDC4 LEAD_SNP rs255049 chr16 68013471 Intron 5b ASSOCIATION 19060910 HDL cholesterol 7.52287874528 DPEP3 LEAD_SNP rs255052 chr16 68024995 Intron 5b ASSOCIATION 18193043 HDL cholesterol 7.0 DPEP2 LEAD_SNP rs7197653 chr16 68383047 Intron 5b ASSOCIATION 20700443 Serum magnesium levels 5.69897000434 PRMT7 LEAD_SNP rs1728785 chr16 68591230 Intron 6 ASSOCIATION 19915572 Ulcerative colitis 7.52287874528 ZFP90 FUNCTIONAL_SNP rs3203684 chr16 68600440 Exon,non-coding 6 9210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1749792 chr16 68569440 Exon,non-coding 6 21790 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7118 chr16 68600855 Exon,non-coding 6 9625 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs698719 chr16 68560125 Intergenic 2a 31105 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs698717 chr16 68560199 Intergenic 2b 31031 CEU:1.0;0.889, YRI:1.0;0.761 FUNCTIONAL_SNP rs1645974 chr16 68564774 Intergenic 2b 26456 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170442 chr16 68574064 Intron 4 17166 CEU:1.0;0.93, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170444 chr16 68573287 Intergenic 4 17943 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170445 chr16 68573064 Intergenic 4 18166 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4783653 chr16 68562815 Intergenic 4 28415 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1182968 chr16 68573945 Intron 4 17285 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728773 chr16 68563644 Intergenic 4 27586 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1645934 chr16 68564490 Intergenic 4 26740 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6499186 chr16 68660565 Intergenic 4 69335 CEU:1.0;0.93 FUNCTIONAL_SNP rs1645975 chr16 68564448 Intergenic 4 26782 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs698711 chr16 68561955 Intergenic 5a 29275 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs698714 chr16 68561227 Intergenic 5a 30003 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12925177 chr16 68569645 Intergenic 5a 21585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170437 chr16 68607943 Intergenic 5b 16713 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170439 chr16 68608511 Intergenic 5b 17281 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;0.904 FUNCTIONAL_SNP rs1645923 chr16 68581051 Intron 5b 10179 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6499188 chr16 68674788 Intergenic 5b 83558 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs4783657 chr16 68586322 Intron 6 4908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7205960 chr16 68565604 Intergenic 6 25626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12918861 chr16 68566508 Intergenic 6 24722 CEU:1.0;1.0, CHB:1.0;0.851, JPT:1.0;0.908 FUNCTIONAL_SNP rs11075688 chr16 68655924 Intergenic 6 64694 CEU:0.929;0.864, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;0.585 FUNCTIONAL_SNP rs1624718 chr16 68580385 Intron 6 10845 CEU:1.0;0.898, CHB:0.888;0.711, JPT:1.0;0.845 FUNCTIONAL_SNP rs1645938 chr16 68595197 Intron 6 3967 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.91 FUNCTIONAL_SNP rs889560 chr16 68605784 Intergenic 6 14554 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs8046299 chr16 68672346 Intergenic 6 81116 CEU:1.0;0.906, CHB:1.0;0.867, JPT:1.0;1.0 FUNCTIONAL_SNP rs1069288 chr16 68585285 Intron 6 5945 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1615609 chr16 68596401 Intron 6 5171 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11865339 chr16 68565296 Intergenic 6 25934 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728764 chr16 68572292 Intergenic 6 18938 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728765 chr16 68589433 Intron 6 1797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728781 chr16 68567794 Intergenic 6 23436 CEU:1.0;1.0, CHB:0.92;0.847, JPT:1.0;1.0 FUNCTIONAL_SNP rs10153230 chr16 68671741 Intergenic 6 80511 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728787 chr16 68593042 Intron 6 1812 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11648314 chr16 68596775 Intron 6 5545 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1645928 chr16 68590610 Intron 6 620 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1645979 chr16 68603660 Intergenic 6 12430 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.639 FUNCTIONAL_SNP rs821169 chr16 68630184 Intergenic 6 38954 CEU:0.929;0.864, CHB:1.0;0.936, JPT:1.0;1.0 FUNCTIONAL_SNP rs864741 chr16 68576577 Intron 6 14653 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs864742 chr16 68575309 Intron 6 15921 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170433 chr16 68606081 Intergenic 7 14851 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170434 chr16 68606590 Intergenic 7 15360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1170436 chr16 68607486 Intergenic 7 16256 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170438 chr16 68608256 Intergenic 7 17026 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12918865 chr16 68566546 Intergenic 7 24684 CEU:1.0;1.0 FUNCTIONAL_SNP rs1103955 chr16 68588488 Intron 7 2742 CEU:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs11075684 chr16 68582365 Intron 7 8865 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11075680 chr16 68565700 Intergenic 7 25530 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11075687 chr16 68655894 Intergenic 7 64664 CEU:0.929;0.864, CHB:1.0;0.936, JPT:1.0;1.0, YRI:1.0;0.585 FUNCTIONAL_SNP rs698728 chr16 68625253 Intergenic 7 34023 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728789 chr16 68595776 Intron 7 4546 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1631910 chr16 68603335 Intergenic 7 12105 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8050289 chr16 68566976 Intergenic 7 24254 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1183956 chr16 68606726 Intergenic 7 15496 CEU:1.0;1.0, CHB:1.0;0.935, JPT:1.0;1.0 FUNCTIONAL_SNP rs889561 chr16 68605741 Intergenic 7 14511 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1728772 chr16 68584526 Intron 7 6704 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7192341 chr16 68569224 Intergenic 7 22006 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs698720 chr16 68559888 Intergenic 7 31342 CEU:1.0;0.912, CHB:1.0;0.919, JPT:1.0;0.886, YRI:1.0;0.907 FUNCTIONAL_SNP rs1645927 chr16 68589300 Intron 7 1930 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs821167 chr16 68577222 Intron 7 14008 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs11647432 chr16 68565426 Intergenic 7 25804 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170426 chr16 68603798 Intergenic 7 12568 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170427 chr16 68603852 Intergenic 7 12622 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170428 chr16 68603988 Intergenic 7 12758 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.899 FUNCTIONAL_SNP rs1170429 chr16 68604126 Intergenic 7 12896 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170430 chr16 68604954 Intergenic 7 13724 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs17689437 chr16 68600351 Exon,non-coding 7 ASSOCIATION 21107309 Reasoning 6.0 ZFP90 LEAD_SNP rs6499188 chr16 68674788 Intergenic 5b ASSOCIATION 21297633 Ulcerative colitis 7.39794000867 ZFP90 - CDH3 FUNCTIONAL_SNP rs3203684 chr16 68600440 Exon,non-coding 6 74348 CEU:0.929;0.864, CHB:1.0;0.868, JPT:1.0;1.0 FUNCTIONAL_SNP rs1749792 chr16 68569440 Exon,non-coding 6 105348 CEU:0.929;0.864, CHB:1.0;0.873, JPT:1.0;1.0 FUNCTIONAL_SNP rs7118 chr16 68600855 Exon,non-coding 6 73933 CEU:0.929;0.864, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs698719 chr16 68560125 Intergenic 2a 114663 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1645974 chr16 68564774 Intergenic 2b 110014 CEU:0.921;0.848, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170444 chr16 68573287 Intergenic 4 101501 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170445 chr16 68573064 Intergenic 4 101724 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs4783653 chr16 68562815 Intergenic 4 111973 CEU:0.916;0.839, CHB:1.0;0.853, JPT:1.0;1.0 FUNCTIONAL_SNP rs6499186 chr16 68660565 Intergenic 4 14223 CEU:1.0;0.93 FUNCTIONAL_SNP rs1182968 chr16 68573945 Intron 4 100843 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728773 chr16 68563644 Intergenic 4 111144 CEU:0.925;0.856, CHB:1.0;0.872, JPT:1.0;1.0 FUNCTIONAL_SNP rs1645934 chr16 68564490 Intergenic 4 110298 CEU:0.929;0.862, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs1645975 chr16 68564448 Intergenic 4 110340 CEU:0.921;0.848, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs698711 chr16 68561955 Intergenic 5a 112833 CEU:0.925;0.856, CHB:1.0;0.867, JPT:1.0;1.0 FUNCTIONAL_SNP rs698714 chr16 68561227 Intergenic 5a 113561 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs12925177 chr16 68569645 Intergenic 5a 105143 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170437 chr16 68607943 Intergenic 5b 66845 CEU:0.925;0.856, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170439 chr16 68608511 Intergenic 5b 66277 CEU:0.925;0.856, CHB:1.0;0.819, JPT:1.0;0.904 FUNCTIONAL_SNP rs1645923 chr16 68581051 Intron 5b 93737 CEU:0.921;0.848, CHB:1.0;0.866, JPT:1.0;1.0 FUNCTIONAL_SNP rs4783657 chr16 68586322 Intron 6 88466 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs7205960 chr16 68565604 Intergenic 6 109184 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs12918861 chr16 68566508 Intergenic 6 108280 CEU:0.919;0.845, CHB:0.842;0.709, JPT:1.0;0.908 FUNCTIONAL_SNP rs11075688 chr16 68655924 Intergenic 6 18864 CEU:0.929;0.864, CHB:1.0;0.938, JPT:1.0;1.0 FUNCTIONAL_SNP rs1624718 chr16 68580385 Intron 6 94403 CEU:1.0;0.812, CHB:0.884;0.64, JPT:1.0;0.845 FUNCTIONAL_SNP rs889560 chr16 68605784 Intergenic 6 69004 CEU:1.0;0.926, CHB:1.0;0.819, JPT:1.0;1.0 FUNCTIONAL_SNP rs8046299 chr16 68672346 Intergenic 6 2442 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 FUNCTIONAL_SNP rs1069288 chr16 68585285 Intron 6 89503 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1615609 chr16 68596401 Intron 6 78387 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs11865339 chr16 68565296 Intergenic 6 109492 CEU:0.92;0.846, CHB:1.0;0.871, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728764 chr16 68572292 Intergenic 6 102496 CEU:0.929;0.862, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728765 chr16 68589433 Intron 6 85355 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728781 chr16 68567794 Intergenic 6 106994 CEU:0.91;0.828, CHB:0.918;0.78, JPT:1.0;1.0 FUNCTIONAL_SNP rs10153230 chr16 68671741 Intergenic 6 3047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs1728785 chr16 68591230 Intron 6 83558 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728787 chr16 68593042 Intron 6 81746 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs11648314 chr16 68596775 Intron 6 78013 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1645928 chr16 68590610 Intron 6 84178 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1645938 chr16 68595197 Intron 6 79591 CEU:0.91;0.829, CHB:1.0;0.852, JPT:1.0;0.91 FUNCTIONAL_SNP rs1645979 chr16 68603660 Intergenic 6 71128 CEU:1.0;0.926, CHB:1.0;0.873, JPT:1.0;1.0 FUNCTIONAL_SNP rs821169 chr16 68630184 Intergenic 6 44604 CEU:0.929;0.864, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs864741 chr16 68576577 Intron 6 98211 CEU:0.929;0.864, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170433 chr16 68606081 Intergenic 7 68707 CEU:1.0;0.921, CHB:1.0;0.867, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170434 chr16 68606590 Intergenic 7 68198 CEU:1.0;0.926, CHB:1.0;0.867, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170436 chr16 68607486 Intergenic 7 67302 CEU:1.0;0.922, CHB:1.0;0.873, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170438 chr16 68608256 Intergenic 7 66532 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs12918865 chr16 68566546 Intergenic 7 108242 CEU:0.909;0.825 FUNCTIONAL_SNP rs11075684 chr16 68582365 Intron 7 92423 CEU:0.925;0.856, CHB:1.0;0.871, JPT:1.0;1.0 FUNCTIONAL_SNP rs11075680 chr16 68565700 Intergenic 7 109088 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs11075687 chr16 68655894 Intergenic 7 18894 CEU:0.929;0.864, CHB:1.0;0.938, JPT:1.0;1.0 FUNCTIONAL_SNP rs698728 chr16 68625253 Intergenic 7 49535 CEU:0.929;0.864, CHB:1.0;0.938, JPT:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs7192341 chr16 68569224 Intergenic 7 105564 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1631910 chr16 68603335 Intergenic 7 71453 CEU:1.0;0.922, CHB:1.0;0.862, JPT:1.0;1.0 FUNCTIONAL_SNP rs8050289 chr16 68566976 Intergenic 7 107812 CEU:0.929;0.863, CHB:1.0;0.873, JPT:1.0;1.0 FUNCTIONAL_SNP rs1183956 chr16 68606726 Intergenic 7 68062 CEU:1.0;0.926, CHB:0.931;0.813, JPT:1.0;1.0 FUNCTIONAL_SNP rs889561 chr16 68605741 Intergenic 7 69047 CEU:1.0;0.854, CHB:1.0;0.872, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728772 chr16 68584526 Intron 7 90262 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1728789 chr16 68595776 Intron 7 79012 CEU:1.0;0.926, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs698720 chr16 68559888 Intergenic 7 114900 CEU:1.0;0.837, CHB:1.0;0.848, JPT:1.0;0.886 FUNCTIONAL_SNP rs1645927 chr16 68589300 Intron 7 85488 CEU:0.929;0.863, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs821167 chr16 68577222 Intron 7 97566 CEU:0.929;0.863, CHB:1.0;0.763, JPT:1.0;1.0 FUNCTIONAL_SNP rs11647432 chr16 68565426 Intergenic 7 109362 CEU:1.0;0.853, CHB:1.0;0.839, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170426 chr16 68603798 Intergenic 7 70990 CEU:0.929;0.864, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170427 chr16 68603852 Intergenic 7 70936 CEU:1.0;0.926, CHB:1.0;0.873, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170428 chr16 68603988 Intergenic 7 70800 CEU:1.0;0.905, CHB:1.0;0.847, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170429 chr16 68604126 Intergenic 7 70662 CEU:1.0;0.922, CHB:1.0;0.873, JPT:1.0;1.0 FUNCTIONAL_SNP rs1170430 chr16 68604954 Intergenic 7 69834 CEU:1.0;0.898, CHB:1.0;0.848, JPT:1.0;1.0 LEAD_SNP rs9929218 chr16 68820946 Intron 4 ASSOCIATION 19011631 Colorectal cancer 8.0 CDH1 FUNCTIONAL_SNP rs7186084 chr16 68816260 Intron 2b 4686 CEU:1.0;0.865, CHB:1.0;1.0, JPT:1.0;0.822, YRI:1.0;0.955 FUNCTIONAL_SNP rs2961 chr16 68818903 Intron 5b 2043 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2059254 chr16 68817439 Intron 6 3507 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;0.896, YRI:1.0;1.0 FUNCTIONAL_SNP rs9929479 chr16 68821271 Intron 7 325 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs7199991 chr16 68818245 Intron 7 2701 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8047014 chr16 69135049 Intergenic 5b ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.39794000867 RPS2P45 - HAS3 LEAD_SNP rs1364063 chr16 69588572 Intergenic 4 ASSOCIATION 21102462 Menarche (age at onset) 7.69897000434 CYB5B - NFAT5 FUNCTIONAL_SNP rs6499244 chr16 69735271 Exon,non-coding 7 146699 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs1437134 chr16 69730426 Exon,non-coding 6 141854 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs7359336 chr16 69733460 Exon,non-coding 5b 144888 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs889398 chr16 69556715 Intergenic 2b 31857 CEU:1.0;0.961, CHB:1.0;0.528, JPT:1.0;0.904 FUNCTIONAL_SNP rs4783721 chr16 69561156 Intergenic 4 27416 CEU:1.0;1.0, JPT:0.896;0.669, YRI:0.935;0.583 FUNCTIONAL_SNP rs12923231 chr16 69572892 Intergenic 5b 15680 CEU:1.0;0.961, CHB:1.0;0.528, JPT:1.0;0.904, YRI:0.943;0.889 FUNCTIONAL_SNP rs244418 chr16 69622762 Intron 5b 34190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4783722 chr16 69581912 Intergenic 5b 6660 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.732 FUNCTIONAL_SNP rs6499240 chr16 69686912 Intron 6 98340 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs889399 chr16 69556583 Intergenic 6 31989 CEU:1.0;0.961, CHB:1.0;0.528, JPT:1.0;0.904 FUNCTIONAL_SNP rs244415 chr16 69666683 Intron 6 78111 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs244417 chr16 69663519 Intron 6 74947 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs244420 chr16 69657996 Intron 6 69424 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12599391 chr16 69605349 Intron 6 16777 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs16973500 chr16 71965196 Intron 3a ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.15490195999 PKD1L3 LEAD_SNP rs16971384 chr16 72931085 Intron 7 ASSOCIATION 21347282 Coronary heart disease 5.30102999566 ZFHX3 FUNCTIONAL_SNP rs16971380 chr16 72930940 Intron 5b 145 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7199343 chr16 73009024 Intron 6 ASSOCIATION 19132087 Kawasaki disease 5.69897000434 ZFHX3 LEAD_SNP rs7193343 chr16 73029160 Intron 2b ASSOCIATION 19597491 Atrial fibrillation 10.0 ZFHX3 FUNCTIONAL_SNP rs11643592 chr16 73034505 Intron 4 5345 CEU:1.0;1.0, CHB:0.935;0.777, JPT:1.0;0.67 FUNCTIONAL_SNP rs7192350 chr16 73029195 Intron 4 35 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6416747 chr16 73033833 Intron 5b 4673 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs719354 chr16 73042929 Intron 7 13769 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2106261 chr16 73051620 Intron 7 ASSOCIATION 19597492 Atrial fibrillation 14.6989700043 ZFHX3 LEAD_SNP rs12446956 chr16 73501536 Intergenic 7 ASSOCIATION 21042317 Major depressive disorder 6.0 HTA - RPSAP56 LEAD_SNP rs7191888 chr16 73581058 Intergenic 7 ASSOCIATION 19010793 Multiple sclerosis (severity) 5.22184874962 HTA - RPSAP56 LEAD_SNP rs10871290 chr16 74472696 Intergenic 4 ASSOCIATION 18463975 Breast cancer 6.39794000867 CLEC18B - GLG1 FUNCTIONAL_SNP rs7498574 chr16 74472661 Intergenic 4 35 CEU:1.0;0.833, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.801 FUNCTIONAL_SNP rs3863439 chr16 74470644 Intergenic 7 2052 CEU:1.0;0.833, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11649338 chr16 74471420 Intergenic 7 1276 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3851726 chr16 74471644 Intergenic 7 1052 CEU:1.0;0.911, CHB:0.952;0.905, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs16948255 chr16 74881820 Intergenic 5b ASSOCIATION 20041166 HIV-1 control 6.0 FA2H - WDR59 LEAD_SNP rs7202877 chr16 75247245 Intergenic 5b ASSOCIATION 19430480 Type 1 diabetes 14.5228787453 CTRB2 - CTRB1 FUNCTIONAL_SNP rs9940370 chr16 75246885 Intergenic 6 360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.884 LEAD_SNP rs1948632 chr16 75991446 Intergenic 6 ASSOCIATION 20694014 Tuberculosis 5.09691001301 TERF2IP - RPL18P13 LEAD_SNP rs13330107 chr16 76878862 Intergenic 5a ASSOCIATION 18821565 Inattentive symptoms 5.04575749056 CNTNAP4 - MON1B LEAD_SNP rs11864477 chr16 77427769 Intron 5a ASSOCIATION 19249006 Bone mineral density 7.69897000434 ADAMTS18 FUNCTIONAL_SNP rs16945637 chr16 77437577 Intron 5b 9808 CEU:1.0;1.0 FUNCTIONAL_SNP rs11860781 chr16 77430611 Intron 5b 2842 CEU:1.0;1.0, YRI:1.0;0.916 FUNCTIONAL_SNP rs7197572 chr16 77431409 Intron 6 3640 CEU:1.0;1.0 FUNCTIONAL_SNP rs11862322 chr16 77428789 Intron 6 1020 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.864;0.658 FUNCTIONAL_SNP rs11859351 chr16 77428540 Intron 6 771 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.907;0.695 FUNCTIONAL_SNP rs11859065 chr16 77427715 Intron 6 54 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.77 FUNCTIONAL_SNP rs16945612 chr16 77428972 Intron 7 1203 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.77 FUNCTIONAL_SNP rs16945581 chr16 77426706 Intron 7 1063 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.912;0.798 FUNCTIONAL_SNP rs16945586 chr16 77426968 Intron 7 801 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs435746 chr16 77916191 Intron 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.52287874528 VAT1L FUNCTIONAL_SNP rs364537 chr16 77925315 Intron 5b 9124 CEU:1.0;0.936, CHB:1.0;0.939, JPT:1.0;0.949 FUNCTIONAL_SNP rs442307 chr16 77923069 Intron 7 6878 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs440488 chr16 77926130 Intron 7 9939 CEU:1.0;0.939, CHB:1.0;0.943, JPT:1.0;0.953 LEAD_SNP rs2059238 chr16 78258810 Intron 6 ASSOCIATION 19584346 Cardiac structure and function 5.52287874528 WWOX LEAD_SNP rs17706989 chr16 78569957 Intron 7 ASSOCIATION 21107309 Reasoning 6.0 WWOX LEAD_SNP rs2859631 chr16 78631794 Intron 7 ASSOCIATION 20923822 Radiation response 6.0 WWOX LEAD_SNP rs9923451 chr16 78952439 Intron 7 ASSOCIATION 21552555 Obesity 6.09691001301 WWOX FUNCTIONAL_SNP rs1394571 chr16 78951389 Intron 6 1050 CEU:1.0;1.0 FUNCTIONAL_SNP rs1394567 chr16 78950456 Intron 7 1983 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.845 LEAD_SNP rs7498403 chr16 79585021 Intergenic 7 ASSOCIATION 20668459 Height 5.30102999566 RPS3P7 - MAF LEAD_SNP rs1424233 chr16 79682751 Intergenic 7 ASSOCIATION 19151714 Obesity 12.3979400087 MAF - DYNLRB2 FUNCTIONAL_SNP rs9921354 chr16 79683450 Intergenic 5b 699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs1364340 chr16 79676682 Intergenic 6 6069 CEU:1.0;0.961, CHB:1.0;0.943, JPT:1.0;0.939, YRI:0.957;0.814 FUNCTIONAL_SNP rs1424234 chr16 79682703 Intergenic 7 48 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1424236 chr16 79677167 Intergenic 7 5584 CEU:1.0;0.961, CHB:1.0;0.943, JPT:1.0;1.0, YRI:0.957;0.814 FUNCTIONAL_SNP rs1424237 chr16 79677127 Intergenic 7 5624 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.814 LEAD_SNP rs17767419 chr16 79744548 Intergenic 6 ASSOCIATION 21565293 Thyroid volume 14.0457574906 MAF - DYNLRB2 FUNCTIONAL_SNP rs16950997 chr16 79707630 Intergenic 4 36918 CEU:1.0;0.818 FUNCTIONAL_SNP rs17689625 chr16 79748962 Intergenic 5a 4414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.873 FUNCTIONAL_SNP rs17767742 chr16 79749005 Intergenic 5a 4457 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.873 FUNCTIONAL_SNP rs16950982 chr16 79702371 Intergenic 5a 42177 CEU:1.0;0.96 FUNCTIONAL_SNP rs3813582 chr16 79749353 Intergenic 5a 4805 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.913 FUNCTIONAL_SNP rs4575545 chr16 79755446 Intergenic 5b 10898 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.884;0.61 FUNCTIONAL_SNP rs7202770 chr16 79706540 Intergenic 5b 38008 CEU:1.0;0.818 FUNCTIONAL_SNP rs12449161 chr16 79716306 Intergenic 6 28242 CEU:1.0;0.886 FUNCTIONAL_SNP rs7187128 chr16 79709503 Intergenic 6 35045 CEU:1.0;0.886 FUNCTIONAL_SNP rs17689024 chr16 79739978 Intergenic 6 4570 CEU:1.0;1.0, CHB:0.928;0.714, JPT:1.0;1.0, YRI:0.946;0.682 FUNCTIONAL_SNP rs17767491 chr16 79745487 Intergenic 6 939 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11644758 chr16 79708991 Intergenic 6 35557 CEU:1.0;0.88 FUNCTIONAL_SNP rs1345901 chr16 79728049 Intergenic 6 16499 CEU:1.0;0.818 FUNCTIONAL_SNP rs8047723 chr16 79704915 Intergenic 7 39633 CEU:1.0;0.818 FUNCTIONAL_SNP rs12444166 chr16 79709950 Intergenic 7 34598 CEU:1.0;0.959, CHB:1.0;0.566 FUNCTIONAL_SNP rs17767383 chr16 79744401 Intergenic 7 147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11150189 chr16 79734227 Intergenic 7 10321 CEU:0.958;0.917, CHB:0.92;0.618, JPT:0.811;0.619 FUNCTIONAL_SNP rs11150187 chr16 79704412 Intergenic 7 40136 CEU:1.0;0.818 FUNCTIONAL_SNP rs7203756 chr16 79745606 Intergenic 7 1058 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11644082 chr16 79714416 Intergenic 7 30132 CEU:1.0;0.886 FUNCTIONAL_SNP rs8053589 chr16 79726990 Intergenic 7 17558 CEU:1.0;0.96, CHB:0.926;0.671, JPT:0.804;0.608, YRI:0.943;0.672 FUNCTIONAL_SNP rs7188445 chr16 79734987 Intergenic 7 9561 CEU:1.0;0.96, CHB:1.0;0.739, JPT:1.0;0.844, YRI:0.759;0.507 FUNCTIONAL_SNP rs17767904 chr16 79749975 Intergenic 7 5427 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.955;0.873 FUNCTIONAL_SNP rs1424231 chr16 79706751 Intergenic 7 37797 CEU:1.0;0.818 FUNCTIONAL_SNP rs11865979 chr16 79722913 Intergenic 7 21635 CEU:1.0;0.847 LEAD_SNP rs3813579 chr16 79749276 Intergenic 5a ASSOCIATION 21565293 Thyroid volume 9.39794000867 MAF - DYNLRB2 LEAD_SNP rs4889240 chr16 81156522 Intron 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.15490195999 PKD1L2 LEAD_SNP rs6564851 chr16 81264597 Intergenic 7 ASSOCIATION 19185284 Plasma carotenoid and tocopherol levels 23.6989700043 PKD1L2 - BCMO1 LEAD_SNP rs4889294 chr16 81303759 Intron 7 ASSOCIATION 18464913 Protein quantitative trait loci 6.30102999566 BCMO1 LEAD_SNP rs4087296 chr16 82377781 Intergenic 3a ASSOCIATION 17903296 Bone mineral density 6.52287874528 MPHOSPH6 - CDH13 LEAD_SNP rs4082514 chr16 82379953 Intergenic 7 ASSOCIATION 19734545 Cognitive performance 5.52287874528 MPHOSPH6 - CDH13 LEAD_SNP rs1991867 chr16 82519228 Intergenic 7 ASSOCIATION 21502573 D-dimer levels 5.39794000867 MPHOSPH6 - CDH13 FUNCTIONAL_SNP rs17239924 chr16 82490585 Intergenic 5b 28643 CEU:1.0;0.906, CHB:0.912;0.506, JPT:0.894;0.536 FUNCTIONAL_SNP rs16957480 chr16 82499064 Intergenic 6 20164 CEU:1.0;1.0, CHB:0.944;0.89, JPT:0.928;0.862 FUNCTIONAL_SNP rs1821341 chr16 82527597 Intergenic 6 8369 CEU:1.0;1.0, CHB:0.942;0.887, JPT:0.898;0.58, YRI:1.0;0.589 FUNCTIONAL_SNP rs1424062 chr16 82520378 Intergenic 6 1150 CEU:1.0;1.0, CHB:0.944;0.89, JPT:1.0;0.93, YRI:0.952;0.906 FUNCTIONAL_SNP rs8060936 chr16 82498920 Intergenic 7 20308 CEU:1.0;1.0, CHB:0.944;0.89, JPT:0.919;0.782 FUNCTIONAL_SNP rs767018 chr16 82484707 Intergenic 7 34521 CEU:1.0;0.906 FUNCTIONAL_SNP rs1865228 chr16 82498047 Intergenic 7 21181 CEU:1.0;1.0, CHB:0.944;0.89, JPT:0.855;0.731, YRI:0.843;0.644 FUNCTIONAL_SNP rs959733 chr16 82484069 Intergenic 7 35159 CEU:1.0;0.827 FUNCTIONAL_SNP rs16957529 chr16 82525388 Intergenic 7 6160 CEU:1.0;1.0, CHB:0.944;0.891, JPT:0.904;0.599 FUNCTIONAL_SNP rs1364252 chr16 82498992 Intergenic 7 20236 CEU:1.0;1.0, CHB:0.942;0.887, JPT:0.928;0.861, YRI:0.82;0.52 FUNCTIONAL_SNP rs1424063 chr16 82524278 Intergenic 7 5050 CEU:1.0;1.0, CHB:1.0;0.945, JPT:0.904;0.599, YRI:1.0;0.69 LEAD_SNP rs4783227 chr16 82594383 Intergenic 5a ASSOCIATION 20195266 Response to antipsychotic treatment 6.39794000867 MPHOSPH6 - CDH13 LEAD_SNP rs11646213 chr16 82642651 Intergenic 6 ASSOCIATION 19304780 Hypertension 5.09691001301 MPHOSPH6 - CDH13 LEAD_SNP rs3865188 chr16 82650717 Intergenic 6 ASSOCIATION 20887962 Adiponectin levels 82.5228787453 MPHOSPH6 - CDH13 ASSOCIATION 20876611 Adiponectin levels 29.3979400087 MPHOSPH6 - CDH13 FUNCTIONAL_SNP rs4783241 chr16 82650384 Intergenic 3a 333 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.855 LEAD_SNP rs11646411 chr16 82746937 Intron 7 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.15490195999 CDH13 LEAD_SNP rs12386026 chr16 82817591 Intron 7 ASSOCIATION 20694014 Tuberculosis 5.69897000434 CDH13 LEAD_SNP rs8055236 chr16 83212398 Intron 7 ASSOCIATION 17554300 Coronary heart disease 5.22184874962 CDH13 LEAD_SNP rs10514585 chr16 83284338 Intron 7 ASSOCIATION 20800221 Depression--quantitative trait 5.30102999566 CDH13 FUNCTIONAL_SNP rs717840 chr16 83288987 Intron 7 4649 CEU:1.0;0.809, CHB:1.0;0.898, JPT:0.947;0.814, YRI:1.0;0.55 FUNCTIONAL_SNP rs12596191 chr16 83286768 Intron 7 2430 CEU:1.0;0.945, CHB:0.888;0.749, JPT:0.949;0.858 LEAD_SNP rs17216786 chr16 83487471 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 6.0 CDH13 LEAD_SNP rs6563943 chr16 83639335 Intron 7 ASSOCIATION 20189936 Height 5.22184874962 CDH13 FUNCTIONAL_SNP rs9934609 chr16 83638578 Intron 7 757 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs9934700 chr16 83638734 Intron 7 601 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 LEAD_SNP rs3784962 chr16 83757328 Intron 6 ASSOCIATION 20125193 Cognitive test performance 5.52287874528 CDH13 FUNCTIONAL_SNP rs9929756 chr16 83756819 Intron 7 509 CEU:0.956;0.809, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.917 LEAD_SNP rs3096277 chr16 83764204 Intron 5a ASSOCIATION 17903302 Blood pressure 9.0 CDH13 LEAD_SNP rs10514604 chr16 84446384 Intron 7 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 6.09691001301 ATP2C2 LEAD_SNP rs371915 chr16 84578241 Intergenic 5b ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 7.69897000434 KIAA1609 - COTL1 FUNCTIONAL_SNP rs4783009 chr16 84578408 Intergenic 6 167 CEU:1.0;0.848, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.618 LEAD_SNP rs11647936 chr16 84685509 Intron 5b ASSOCIATION 20966902 Waist circumference 5.39794000867 KLHL36 LEAD_SNP rs2326458 chr16 84987679 Intergenic 6 ASSOCIATION 18391951 Height 6.09691001301 CRISPLD2 - ZDHHC7 LEAD_SNP rs391525 chr16 85944439 Intron 4 ASSOCIATION 21131588 Chronic lymphocytic leukemia 8.52287874528 IRF8 FUNCTIONAL_SNP rs2292980 chr16 85945076 Intron 2b 637 CEU:1.0;1.0 FUNCTIONAL_SNP rs2292982 chr16 85944823 Intron 5a 384 CEU:1.0;1.0, CHB:1.0;0.885, JPT:1.0;0.898 FUNCTIONAL_SNP rs305077 chr16 85943466 Intron 7 973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs305061 chr16 85975659 Intergenic 5a ASSOCIATION 20062064 Chronic lymphocytic leukemia 6.39794000867 IRF8 - FOXF1 FUNCTIONAL_SNP rs305067 chr16 85971840 Intergenic 3a 3819 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs305089 chr16 85981030 Intergenic 4 5371 CEU:1.0;1.0, CHB:0.91;0.761, JPT:1.0;0.822 FUNCTIONAL_SNP rs305090 chr16 85979346 Intergenic 4 3687 CEU:1.0;0.919, YRI:0.902;0.631 FUNCTIONAL_SNP rs305064 chr16 85974142 Intergenic 4 1517 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs305065 chr16 85973866 Intergenic 4 1793 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs447919 chr16 85968557 Intergenic 5a 7102 CEU:0.954;0.802, CHB:1.0;0.59 FUNCTIONAL_SNP rs305092 chr16 85979117 Intergenic 5b 3458 CEU:1.0;0.919, YRI:1.0;0.816 FUNCTIONAL_SNP rs305094 chr16 85978105 Intergenic 5b 2446 CEU:1.0;1.0, CHB:0.916;0.775, JPT:1.0;0.823, YRI:0.905;0.748 LEAD_SNP rs16940202 chr16 86014241 Intergenic 5b ASSOCIATION 21297633 Ulcerative colitis 18.2218487496 IRF8 - FOXF1 FUNCTIONAL_SNP rs16940186 chr16 86009740 Intergenic 5a 4501 CEU:0.912;0.831, CHB:1.0;0.942, JPT:1.0;0.93 LEAD_SNP rs17445836 chr16 86017663 Intergenic 5b ASSOCIATION 19525953 Multiple sclerosis 8.39794000867 IRF8 - FOXF1 LEAD_SNP rs11117432 chr16 86019271 Intergenic 4 ASSOCIATION 21399635 Primary biliary cirrhosis 10.3010299957 IRF8 - FOXF1 FUNCTIONAL_SNP rs17445836 chr16 86017663 Intergenic 5b 1608 CEU:1.0;1.0, CHB:1.0;0.631, JPT:1.0;0.568, YRI:1.0;1.0 LEAD_SNP rs2696835 chr16 86365571 Intergenic 4 ASSOCIATION 21441570 Diabetic retinopathy 5.52287874528 IRF8 - FOXF1 FUNCTIONAL_SNP rs2696845 chr16 86371509 Exon,non-coding 5b 5938 CEU:1.0;0.866 FUNCTIONAL_SNP rs2696838 chr16 86366001 Intergenic 5b 430 CEU:1.0;0.866 FUNCTIONAL_SNP rs3098634 chr16 86366538 Intergenic 6 967 CEU:1.0;0.866 LEAD_SNP rs11641231 chr16 86381184 Intergenic 7 ASSOCIATION 20339536 Response to statin therapy 5.09691001301 IRF8 - FOXF1 LEAD_SNP rs10048146 chr16 86710660 Intergenic 7 ASSOCIATION 19801982 Bone mineral density (hip) 6.69897000434 FOXL1 - RPL39P30 ASSOCIATION 19801982 Bone mineral density (spine) 7.69897000434 FOXL1 - RPL39P30 FUNCTIONAL_SNP rs12932673 chr16 86709731 Intergenic 5b 929 CEU:1.0;0.922, CHB:0.925;0.856, JPT:1.0;1.0, YRI:1.0;0.847 LEAD_SNP rs4843747 chr16 87991051 Intron 5b ASSOCIATION 19448619 Menopause (age at onset) 6.69897000434 BANP LEAD_SNP rs12447690 chr16 88298124 Intergenic 5b ASSOCIATION 20719862 Central corneal thickness 21.2218487496 BANP - ZNF469 ASSOCIATION 20485516 Central corneal thickness 10.0457574906 BANP - ZNF469 FUNCTIONAL_SNP rs7501402 chr16 88320911 Intergenic 2b 22787 CEU:1.0;1.0, CHB:0.929;0.649, JPT:0.942;0.84 FUNCTIONAL_SNP rs7405095 chr16 88307825 Intergenic 4 9701 CEU:1.0;1.0 FUNCTIONAL_SNP rs7501109 chr16 88320862 Intergenic 4 22738 CEU:1.0;1.0 FUNCTIONAL_SNP rs6540214 chr16 88301976 Intergenic 4 3852 CEU:1.0;1.0 FUNCTIONAL_SNP rs7500824 chr16 88299491 Intergenic 5b 1367 CEU:1.0;0.959, YRI:1.0;0.732 FUNCTIONAL_SNP rs6540220 chr16 88315515 Intergenic 5b 17391 CEU:1.0;1.0 FUNCTIONAL_SNP rs6540223 chr16 88321436 Intergenic 5b 23312 CEU:1.0;1.0 FUNCTIONAL_SNP rs8059024 chr16 88314163 Intergenic 7 16039 CEU:1.0;1.0 LEAD_SNP rs837763 chr16 88853729 Intergenic 5b ASSOCIATION 20139978 Hematological and biochemical traits 12.3979400087 FLJ40448 - CDT1 LEAD_SNP rs154659 chr16 89667337 Intergenic 5b ASSOCIATION 19340012 Tanning 7.15490195999 CPNE7 - DPEP1 LEAD_SNP rs258322 chr16 89755903 Intron 7 ASSOCIATION 19578364 Melanoma 26.5228787453 CDK10 ASSOCIATION 18483556 Black vs. red hair color 22.6989700043 CDK10 FUNCTIONAL_SNP rs12922197 chr16 89744809 Intergenic 4 11094 CEU:1.0;1.0 FUNCTIONAL_SNP rs12921383 chr16 89859753 Intron 4 103850 CEU:1.0;0.845 FUNCTIONAL_SNP rs12918773 chr16 89741403 Intergenic 6 14500 CEU:1.0;1.0 LEAD_SNP rs12931267 chr16 89818732 Intron 7 ASSOCIATION 20585627 Freckling 61.096910013 FANCA ASSOCIATION 20585627 Hair color 86.3010299957 FANCA ASSOCIATION 20585627 Hair color 9.52287874528 FANCA LEAD_SNP rs16966142 chr16 89851033 Intron 5b ASSOCIATION 21490707 Caffeine consumption 5.22184874962 FANCA LEAD_SNP rs1805007 chr16 89986117 Intergenic 4 ASSOCIATION 21700618 Basal cell carcinoma (cutaneous) 16.3979400087 MC1R ASSOCIATION 17952075 Blond vs. brown hair color 12.6989700043 MC1R ASSOCIATION 17952075 Freckles 96.0 MC1R ASSOCIATION 17952075 Red vs non-red hair color 141.698970004 MC1R ASSOCIATION 17952075 Skin sensitivity to sun 54.6989700043 MC1R FUNCTIONAL_SNP rs11076649 chr16 90059336 Intergenic 7 73219 CEU:1.0;0.813 LEAD_SNP rs4785763 chr16 90066936 Exon,non-coding 5b ASSOCIATION 19578364 Melanoma 21.2218487496 AFG3L1 LEAD_SNP rs11648785 chr16 90084561 Intron 5b ASSOCIATION 19340012 Tanning 8.52287874528 DBNDD1 LEAD_SNP rs7217319 chr17 38924 Intergenic 5b ASSOCIATION 21502085 AIDS progression 5.39794000867 DOC2B - RPH3AL LEAD_SNP rs12150338 chr17 1634104 Coding 5b ASSOCIATION 20705733 Serum calcium 6.15490195999 WDR81 LEAD_SNP rs1231206 chr17 2125605 Intron 5b ASSOCIATION 21378990 Coronary heart disease 9.04575749056 SMG6 FUNCTIONAL_SNP rs7212249 chr17 2135980 Exon,non-coding 7 10375 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.84 FUNCTIONAL_SNP rs2281727 chr17 2117945 Intron 2b 7660 CEU:1.0;0.914, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs216172 chr17 2126504 Intron 4 899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.769 FUNCTIONAL_SNP rs11655813 chr17 2119101 Intron 4 6504 CEU:0.954;0.869, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.711 FUNCTIONAL_SNP rs1231209 chr17 2124972 Intron 5a 633 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs2169357 chr17 2096441 Intron 5b 29164 CEU:1.0;0.877, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.529 FUNCTIONAL_SNP rs9895551 chr17 2115922 Intron 5b 9683 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs9913504 chr17 2102245 Intron 5b 23360 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs7217226 chr17 2136065 Intron 6 10460 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs11078865 chr17 2109109 Intron 6 16496 CEU:1.0;0.816, CHB:1.0;1.0, JPT:1.0;0.914, YRI:1.0;0.702 FUNCTIONAL_SNP rs9900379 chr17 2101134 Intron 6 24471 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs12602764 chr17 2123200 Intron 6 2405 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs12603592 chr17 2119818 Intron 6 5787 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs4790885 chr17 2108578 Intron 7 17027 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.718 FUNCTIONAL_SNP rs143499 chr17 2132324 Intron 7 6719 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs216217 chr17 2145090 Intron 7 19485 CEU:0.94;0.834, CHB:1.0;0.84, JPT:1.0;0.914 FUNCTIONAL_SNP rs11078883 chr17 2138828 Intron 7 13223 CEU:1.0;0.914, CHB:1.0;1.0, JPT:1.0;0.804, YRI:0.949;0.552 FUNCTIONAL_SNP rs8076939 chr17 2099931 Intron 7 25674 CEU:1.0;0.918, CHB:1.0;0.937, JPT:1.0;0.93, YRI:0.953;0.543 FUNCTIONAL_SNP rs9906500 chr17 2129210 Intron 7 3605 CEU:1.0;0.916, CHB:1.0;0.937, JPT:1.0;0.927, YRI:1.0;0.838 FUNCTIONAL_SNP rs6503324 chr17 2100512 Intron 7 25093 CEU:1.0;0.913, CHB:0.925;0.856, JPT:1.0;1.0, YRI:0.949;0.552 LEAD_SNP rs216172 chr17 2126504 Intron 4 ASSOCIATION 21378990 Coronary heart disease 9.0 SMG6 FUNCTIONAL_SNP rs7212249 chr17 2135980 Exon,non-coding 7 9476 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.627 FUNCTIONAL_SNP rs2281727 chr17 2117945 Intron 2b 8559 CEU:1.0;0.911, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.643 FUNCTIONAL_SNP rs11655813 chr17 2119101 Intron 4 7403 CEU:0.952;0.865, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.87 FUNCTIONAL_SNP rs1231209 chr17 2124972 Intron 5a 1532 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;0.931, YRI:1.0;0.671 FUNCTIONAL_SNP rs2169357 chr17 2096441 Intron 5b 30063 CEU:1.0;0.873, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9895551 chr17 2115922 Intron 5b 10582 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.643 FUNCTIONAL_SNP rs1231206 chr17 2125605 Intron 5b 899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.769 FUNCTIONAL_SNP rs9913504 chr17 2102245 Intron 5b 24259 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.649 FUNCTIONAL_SNP rs7217226 chr17 2136065 Intron 6 9561 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.643 FUNCTIONAL_SNP rs11078865 chr17 2109109 Intron 6 17395 CEU:1.0;0.809, CHB:1.0;1.0, JPT:1.0;0.919, YRI:1.0;0.954 FUNCTIONAL_SNP rs9900379 chr17 2101134 Intron 6 25370 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.917;0.698 FUNCTIONAL_SNP rs12602764 chr17 2123200 Intron 6 3304 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.671 FUNCTIONAL_SNP rs12603592 chr17 2119818 Intron 6 6686 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.609 FUNCTIONAL_SNP rs4790885 chr17 2108578 Intron 7 17926 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs143499 chr17 2132324 Intron 7 5820 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.695 FUNCTIONAL_SNP rs216217 chr17 2145090 Intron 7 18586 CEU:0.937;0.826, CHB:1.0;0.84, JPT:1.0;0.914 FUNCTIONAL_SNP rs11078883 chr17 2138828 Intron 7 12324 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;0.812 FUNCTIONAL_SNP rs8076939 chr17 2099931 Intron 7 26573 CEU:1.0;0.915, CHB:1.0;0.937, JPT:1.0;0.933 FUNCTIONAL_SNP rs9906500 chr17 2129210 Intron 7 2706 CEU:1.0;0.913, CHB:1.0;0.937, JPT:1.0;0.931, YRI:1.0;0.646 FUNCTIONAL_SNP rs6503324 chr17 2100512 Intron 7 25992 CEU:1.0;0.911, CHB:0.925;0.856, JPT:1.0;1.0 LEAD_SNP rs10852932 chr17 2143460 Intron 4 ASSOCIATION 19584346 Aortic root size 10.6989700043 SMG6 FUNCTIONAL_SNP rs216193 chr17 2203453 Coding 7 59993 CEU:1.0;0.897, CHB:1.0;0.744, JPT:1.0;0.927 FUNCTIONAL_SNP rs749240 chr17 2186100 Coding 5b 42640 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8065650 chr17 2180823 Intron 5a 37363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8066372 chr17 2180968 Intron 5a 37508 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2169357 chr17 2096441 Intron 5b 47019 CEU:0.943;0.841, CHB:1.0;1.0, JPT:1.0;0.931 FUNCTIONAL_SNP rs12938295 chr17 2160854 Intron 5b 17394 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2224770 chr17 2205923 Intron 5b 62463 CEU:1.0;0.897, CHB:1.0;0.744, JPT:1.0;0.927 FUNCTIONAL_SNP rs216219 chr17 2147291 Intron 5b 3831 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs216183 chr17 2173923 Intron 6 30463 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs216191 chr17 2188639 Intron 6 45179 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs403553 chr17 2191260 Intron 6 47800 CEU:1.0;1.0, CHB:1.0;0.901, JPT:1.0;0.927 FUNCTIONAL_SNP rs12943566 chr17 2157774 Intron 6 14314 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9905529 chr17 2177732 Intron 6 34272 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11657644 chr17 2175210 Intron 6 31750 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs170044 chr17 2197502 Intron 7 54042 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8074850 chr17 2187931 Intron 7 44471 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs216189 chr17 2187401 Intron 7 43941 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs216190 chr17 2187457 Intron 7 43997 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs216200 chr17 2199846 Intron 7 56386 CEU:1.0;0.947, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs216201 chr17 2198800 Intron 7 55340 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs216202 chr17 2197387 Intron 7 53927 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs216206 chr17 2196088 Intron 7 52628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs216217 chr17 2145090 Intron 7 1630 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs216223 chr17 2155948 Intron 7 12488 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7213232 chr17 2165340 Intron 7 21880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs177567 chr17 2197637 Intron 7 54177 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4523957 chr17 2208899 Intron 7 65439 CEU:1.0;0.897, CHB:1.0;0.744, JPT:1.0;0.927 LEAD_SNP rs391300 chr17 2216258 Intron 5b ASSOCIATION 20174558 Type 2 diabetes 8.52287874528 SRR LEAD_SNP rs9891572 chr17 2428508 Intergenic 7 ASSOCIATION 19060910 HDL cholesterol 6.69897000434 METT10D - EIF4A1P9 FUNCTIONAL_SNP rs12450119 chr17 2420934 Intergenic 7 7574 CEU:0.917;0.84, CHB:1.0;0.949, JPT:1.0;0.944, YRI:1.0;1.0 LEAD_SNP rs12603284 chr17 2771512 Intron 4 ASSOCIATION 21658281 Sudden cardiac arrest 5.52287874528 RAP1GAP2 FUNCTIONAL_SNP rs1076164 chr17 2773932 Intron 5b 2420 CEU:1.0;0.8, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs220470 chr17 3664975 Intron 5b ASSOCIATION 18839057 Attention deficit hyperactivity disorder 7.0 ITGAE LEAD_SNP rs758642 chr17 3786907 Intron 4 ASSOCIATION 19247474 Smoking behavior 5.15490195999 CAMKK1 LEAD_SNP rs6065 chr17 4836381 Coding 4 ASSOCIATION 20139978 Hematological and biochemical traits 11.6989700043 GP1BA FUNCTIONAL_SNP rs1060431 chr17 4840868 Exon,non-coding 5b 4487 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9303196 chr17 5907443 Intergenic 7 ASSOCIATION 20876614 Non-small cell lung cancer 5.09691001301 RNU7-31P - WSCD1 LEAD_SNP rs6761 chr17 7417663 Exon,non-coding 5b ASSOCIATION 18464913 Protein quantitative trait loci 6.52287874528 POLR2A FUNCTIONAL_SNP rs11078688 chr17 7422026 Intergenic 6 4363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11655920 chr17 7421696 Intergenic 7 4033 CEU:0.955;0.912, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 LEAD_SNP rs16956936 chr17 7633692 Intron 5b ASSOCIATION 19430480 Type 1 diabetes 6.30102999566 DNAH2 LEAD_SNP rs10521157 chr17 9336370 Intron 5b ASSOCIATION 20595579 Longevity 8.0 STX8 FUNCTIONAL_SNP rs12452001 chr17 9337661 Intron 6 1291 CEU:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs12451858 chr17 9342282 Intron 6 5912 CEU:1.0;0.937, YRI:1.0;0.66 FUNCTIONAL_SNP rs8075395 chr17 9337757 Intron 7 1387 CEU:1.0;1.0 FUNCTIONAL_SNP rs12450827 chr17 9343689 Intron 7 7319 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11078801 chr17 9337245 Intron 7 875 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6503319 chr17 10574159 Intergenic 7 ASSOCIATION 19465909 Malaria 6.15490195999 MYH3 - SCO1 LEAD_SNP rs10521232 chr17 13539804 Intergenic 6 ASSOCIATION 17903302 Tonometry 5.39794000867 HS3ST3A1 - CDRT15P FUNCTIONAL_SNP rs11078169 chr17 13539564 Intergenic 5b 240 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs11078170 chr17 13539616 Intergenic 6 188 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11078171 chr17 13539635 Intergenic 7 169 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4792394 chr17 13684917 Intron 6 ASSOCIATION 20585324 Conduct disorder (symptom count) 5.04575749056 HS3ST3A1 - CDRT15P LEAD_SNP rs12949531 chr17 13733806 Intergenic 5a ASSOCIATION 19165918 Systemic lupus erythematosus 5.09691001301 HS3ST3A1 - CDRT15P FUNCTIONAL_SNP rs12452804 chr17 13737839 Intergenic 7 4033 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3848445 chr17 14294021 Intron 6 ASSOCIATION 18464913 Protein quantitative trait loci 8.09691001301 MGC12916 - RPS18P12 LEAD_SNP rs2906966 chr17 15331517 Intergenic 7 ASSOCIATION 17903307 Pulmonary function traits (other) 5.09691001301 LOC100287829 LEAD_SNP rs4273077 chr17 16849139 Intron 4 ASSOCIATION 20139978 Hematological and biochemical traits 9.52287874528 TNFRSF13B LEAD_SNP rs11867934 chr17 16933404 Intergenic 2b ASSOCIATION 21441570 Diabetic retinopathy 5.15490195999 TNFRSF13B - MPRIP FUNCTIONAL_SNP rs4985740 chr17 17084648 Intron 5b 151244 CEU:0.936;0.824 FUNCTIONAL_SNP rs8073842 chr17 16922872 Intergenic 5b 10532 CEU:1.0;0.825 FUNCTIONAL_SNP rs7207485 chr17 17090267 Intergenic 5b 156863 CEU:0.937;0.825 FUNCTIONAL_SNP rs8079563 chr17 16932880 Intergenic 5b 524 CEU:1.0;0.827 FUNCTIONAL_SNP rs7217091 chr17 17060805 Intron 6 127401 CEU:0.936;0.824 LEAD_SNP rs12936587 chr17 17543722 Intergenic 7 ASSOCIATION 21378990 Coronary heart disease 9.39794000867 PEMT - RAI1 FUNCTIONAL_SNP rs8068296 chr17 17554563 Intergenic 4 10841 CEU:0.958;0.815, JPT:1.0;0.601 FUNCTIONAL_SNP rs9890064 chr17 17538008 Intergenic 5a 5714 CEU:0.956;0.81 FUNCTIONAL_SNP rs8074794 chr17 17534729 Intergenic 5b 8993 CEU:0.957;0.814 FUNCTIONAL_SNP rs11871738 chr17 17525243 Intergenic 5b 18479 CEU:1.0;0.822 FUNCTIONAL_SNP rs9900673 chr17 17548633 Intergenic 7 4911 CEU:1.0;0.852, JPT:1.0;0.602 FUNCTIONAL_SNP rs12945496 chr17 17537197 Intergenic 7 6525 CEU:1.0;0.831, CHB:1.0;0.529 FUNCTIONAL_SNP rs12449964 chr17 17544704 Intergenic 7 982 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;0.579 FUNCTIONAL_SNP rs12951347 chr17 17534513 Intergenic 7 9209 CEU:1.0;0.828, CHB:1.0;0.529 FUNCTIONAL_SNP rs12943416 chr17 17535535 Intergenic 7 8187 CEU:1.0;0.814 FUNCTIONAL_SNP rs9901291 chr17 17541750 Intergenic 7 1972 CEU:0.957;0.814 FUNCTIONAL_SNP rs12602348 chr17 17547236 Intergenic 7 3514 CEU:1.0;0.862, JPT:1.0;0.602 FUNCTIONAL_SNP rs12942708 chr17 17528011 Intergenic 7 15711 CEU:1.0;0.822 LEAD_SNP rs11868035 chr17 17715101 Intron 2b ASSOCIATION 21738487 Parkinson's disease 7.22184874962 SREBF1;RAI1 LEAD_SNP rs4924935 chr17 18753870 Intergenic 7 ASSOCIATION 20686608 Pancreatic cancer 5.09691001301 FAM18B1 - PRPSAP2 FUNCTIONAL_SNP rs1737947 chr17 18831432 Intron 6 77562 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.929;0.806 FUNCTIONAL_SNP rs6502674 chr17 18776897 Intron 7 23027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.929;0.806 LEAD_SNP rs1975974 chr17 21707060 Intergenic 7 ASSOCIATION 20953189 Psoriasis 7.0 C17orf51 - UBBP4 FUNCTIONAL_SNP rs1985718 chr17 21731656 Exon,non-coding 7 24596 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 FUNCTIONAL_SNP rs17052352 chr17 21721972 Intergenic 7 14912 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.867 LEAD_SNP rs4795519 chr17 25541278 Intergenic 5b ASSOCIATION 21540461 Chronic myeloid leukemia 12.0 TUFML - RPL34P31 FUNCTIONAL_SNP rs11652017 chr17 25410639 Intergenic 2b 130639 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11658274 chr17 25373048 Intergenic 4 168230 CEU:1.0;0.81, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11650889 chr17 25410734 Intergenic 4 130544 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11080048 chr17 25372948 Intergenic 4 168330 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11653183 chr17 25411141 Intergenic 5a 130137 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1842167 chr17 25464300 Intergenic 5a 76978 CEU:1.0;0.916, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8071740 chr17 25525731 Intergenic 5b 15547 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs952000 chr17 25484841 Intergenic 5b 56437 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs10853131 chr17 25481292 Intergenic 5b 59986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.694 FUNCTIONAL_SNP rs11871551 chr17 25480996 Intergenic 5b 60282 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11080056 chr17 25404049 Intergenic 5b 137229 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12942290 chr17 25416699 Intergenic 5b 124579 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2061900 chr17 25448566 Intergenic 6 92712 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2169956 chr17 25470744 Intergenic 6 70534 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.925 FUNCTIONAL_SNP rs9972902 chr17 25455185 Intergenic 6 86093 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.925 FUNCTIONAL_SNP rs2127283 chr17 25482880 Intergenic 6 58398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs9303617 chr17 25436672 Intergenic 7 104606 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4795481 chr17 25468227 Intergenic 7 73051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4795483 chr17 25468586 Intergenic 7 72692 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1824903 chr17 25498297 Intergenic 7 42981 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2199750 chr17 25444829 Intergenic 7 96449 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7225143 chr17 25378718 Intergenic 7 162560 CEU:1.0;0.81, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1600326 chr17 25491541 Intergenic 7 49737 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.922 FUNCTIONAL_SNP rs2313051 chr17 25366284 Intergenic 7 174994 CEU:1.0;0.81, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12450669 chr17 25517320 Intergenic 7 23958 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs1851267 chr17 25397308 Intergenic 7 143970 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12451205 chr17 25517156 Intergenic 7 24122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4520869 chr17 25358028 Intergenic 7 183250 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs953768 chr17 25442698 Intergenic 7 98580 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4795067 chr17 26106675 Intron 7 ASSOCIATION 20953189 Psoriasis 10.3979400087 NOS2 LEAD_SNP rs2138852 chr17 27703349 Intergenic 5b ASSOCIATION 19820697 Mean platelet volume 22.0 RPL35AP35 - TAOK1 ASSOCIATION 19110211 Mean platelet volume 27.15490196 RPL35AP35 - TAOK1 FUNCTIONAL_SNP rs507577 chr17 27869968 Coding 7 166619 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs480642 chr17 27810797 Intron 2b 107448 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7210047 chr17 27728496 Intron 4 25147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4289056 chr17 27766152 Intron 5a 62803 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs591433 chr17 27832990 Intron 5a 129641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2559627 chr17 27841694 Intron 5b 138345 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8076739 chr17 27714587 Intergenic 5b 11238 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7208675 chr17 27737148 Intron 5b 33799 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12945717 chr17 27702052 Intergenic 5b 1297 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9916533 chr17 27771128 Intron 5b 67779 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs536327 chr17 27857698 Intron 6 154349 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11656066 chr17 27745965 Intron 6 42616 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9900280 chr17 27769598 Intron 6 66249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11651639 chr17 27672320 Intergenic 6 31029 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.866 FUNCTIONAL_SNP rs9891920 chr17 27773289 Intron 6 69940 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13341521 chr17 27763242 Intron 6 59893 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7222766 chr17 27679725 Intergenic 6 23624 CEU:1.0;1.0 FUNCTIONAL_SNP rs8081267 chr17 27763910 Intron 6 60561 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2559621 chr17 27799159 Intron 7 95810 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1662600 chr17 27850428 Intron 7 147079 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12943131 chr17 27863706 Intron 7 160357 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6505121 chr17 27708717 Intergenic 7 5368 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2586150 chr17 27828692 Intron 7 125343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6505129 chr17 27753618 Intron 7 50269 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs576426 chr17 27850202 Intron 7 146853 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs526664 chr17 27824144 Intron 7 120795 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs516051 chr17 27882705 Intergenic 7 179356 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11655000 chr17 27767343 Intron 7 63994 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs771428 chr17 27793559 Intron 7 90210 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.584 FUNCTIONAL_SNP rs12936923 chr17 27826542 Intron 7 123193 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs596700 chr17 27840247 Intron 7 136898 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs592862 chr17 27855002 Intron 7 151653 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs559972 chr17 27814496 Intron 7 111147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4794857 chr17 27782290 Intron 7 78941 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs547306 chr17 27862588 Intron 7 159239 CEU:0.956;0.915, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4056946 chr17 27705463 Intergenic 7 2114 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs602056 chr17 27872147 Intergenic 7 168798 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1568373 chr17 27760143 Intron 7 56794 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4795510 chr17 27778834 Intron 7 75485 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs3760318 chr17 29247715 Intergenic 4 ASSOCIATION 18391951 Height 8.69897000434 ADAP2 LEAD_SNP rs225190 chr17 30877658 Intron 7 ASSOCIATION 20686608 Pancreatic cancer 5.22184874962 MYO1D FUNCTIONAL_SNP rs225188 chr17 30878170 Intron 5b 512 CEU:1.0;1.0, CHB:1.0;0.85, JPT:1.0;0.948, YRI:1.0;1.0 LEAD_SNP rs11650066 chr17 32287449 Intron 6 ASSOCIATION 21378988 Coronary heart disease 5.22184874962 ACCN1 FUNCTIONAL_SNP rs9894918 chr17 32284125 Intron 5b 3324 CEU:1.0;0.905, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11868730 chr17 32271966 Intron 5b 15483 CEU:1.0;0.907, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1556737 chr17 32271366 Intron 7 16083 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9906893 chr17 32288219 Intron 7 770 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11655097 chr17 32287132 Intron 7 317 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3091315 chr17 32593665 Intergenic 5b ASSOCIATION 21102463 Crohn's disease 12.6989700043 CCL2 - CCL7 FUNCTIONAL_SNP rs13900 chr17 32583911 Exon,non-coding 6 9754 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1024611 chr17 32579788 Intergenic 2b 13877 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs2857656 chr17 32582007 Intergenic 4 11658 CEU:1.0;1.0, CHB:0.952;0.906, JPT:1.0;1.0, YRI:0.96;0.824 FUNCTIONAL_SNP rs9889296 chr17 32570547 Intergenic 6 23118 CEU:0.948;0.899, CHB:0.95;0.903, JPT:1.0;0.94, YRI:0.872;0.731 FUNCTIONAL_SNP rs7503519 chr17 32591009 Intergenic 6 2656 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2368471 chr17 32590962 Intergenic 6 2703 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.954 FUNCTIONAL_SNP rs1080327 chr17 32591666 Intergenic 7 1999 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs11870347 chr17 32592697 Intergenic 7 968 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs714910 chr17 32617265 Intergenic 7 23600 CEU:0.951;0.904, CHB:1.0;0.954, JPT:1.0;0.949 FUNCTIONAL_SNP rs991804 chr17 32587725 Intergenic 7 5940 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1989055 chr17 32591996 Intergenic 7 1669 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.964 FUNCTIONAL_SNP rs7210316 chr17 32573507 Intergenic 7 20158 CEU:0.949;0.9, CHB:0.951;0.904, JPT:0.941;0.885, YRI:0.92;0.813 FUNCTIONAL_SNP rs1860184 chr17 32613132 Intron 7 19467 CEU:0.95;0.903, CHB:1.0;0.954, JPT:1.0;0.949 FUNCTIONAL_SNP rs3091316 chr17 32593974 Intergenic 7 309 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4795894 chr17 32591444 Intergenic 7 2221 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 LEAD_SNP rs2074518 chr17 33324382 Intron 5b ASSOCIATION 19305408 QT interval 11.2218487496 LIG3 LEAD_SNP rs8070473 chr17 33843512 Intron 5b ASSOCIATION 20800221 Depression--quantitative trait 5.69897000434 SLFN12L FUNCTIONAL_SNP rs4796093 chr17 33846604 Intron 2b 3092 CEU:1.0;0.843, CHB:1.0;1.0, JPT:1.0;0.95 FUNCTIONAL_SNP rs8066424 chr17 33843917 Intron 6 405 CEU:1.0;0.843, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs8068353 chr17 33840295 Intron 7 3217 CEU:1.0;1.0 LEAD_SNP rs4796217 chr17 34819191 Intergenic 5b ASSOCIATION 18464913 Protein quantitative trait loci 20.3979400087 TBC1D3G - ZNHIT3 LEAD_SNP rs712039 chr17 35850553 Intron 4 ASSOCIATION 20694014 Tuberculosis 5.52287874528 DUSP14 LEAD_SNP rs4430796 chr17 36098040 Intron 4 ASSOCIATION 21499250 Endometrial cancer 9.15490195999 HNF1B ASSOCIATION 21160077 Serum prostate-specific antigen levels 10.2218487496 HNF1B ASSOCIATION 20581827 Type 2 diabetes 5.69897000434 HNF1B ASSOCIATION 19767754 Prostate cancer 5.09691001301 HNF1B ASSOCIATION 18264096 Prostate cancer 9.0 HNF1B ASSOCIATION 17603485 Prostate cancer 11.0 HNF1B FUNCTIONAL_SNP rs11263763 chr17 36103565 Intron 4 5525 CEU:1.0;0.961, CHB:1.0;0.943, JPT:1.0;0.889 FUNCTIONAL_SNP rs11651755 chr17 36099840 Intron 5b 1800 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.889 FUNCTIONAL_SNP rs2005705 chr17 36096300 Intron 7 1740 CEU:0.957;0.814 LEAD_SNP rs7501939 chr17 36101156 Intron 5b ASSOCIATION 21743057 Prostate cancer 5.69897000434 HNF1B ASSOCIATION 20676098 Prostate cancer 12.0 HNF1B ASSOCIATION 19767753 Prostate cancer 17.5228787453 HNF1B ASSOCIATION 18264097 Prostate cancer 11.0457574906 HNF1B FUNCTIONAL_SNP rs11658063 chr17 36103872 Intron 4 2716 CEU:1.0;0.962, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs4239217 chr17 36098987 Intron 5b 2169 CEU:0.96;0.885, CHB:1.0;1.0, JPT:1.0;0.892 LEAD_SNP rs7208487 chr17 37543449 Intron 5a ASSOCIATION 21399635 Primary biliary cirrhosis 6.09691001301 FBXL20 FUNCTIONAL_SNP rs3744349 chr17 37414842 Exon,non-coding 7 128607 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.833, YRI:1.0;0.674 FUNCTIONAL_SNP rs6503504 chr17 37514412 Intron 2b 29037 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2338799 chr17 37513941 Intron 3a 29508 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11078895 chr17 37401051 Intergenic 4 142398 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs801418 chr17 37457982 Intron 5a 85467 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs4488484 chr17 37717377 Intergenic 5a 173928 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs7208252 chr17 37584368 Intron 5a 40919 CEU:1.0;0.918, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4516267 chr17 37471482 Intron 5b 71967 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs676882 chr17 37433424 Intron 5b 110025 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs801427 chr17 37436711 Intron 5b 106738 CEU:1.0;1.0, CHB:1.0;0.873, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs12950186 chr17 37393395 Intergenic 5b 150054 CEU:1.0;1.0, CHB:1.0;0.93, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs590051 chr17 37446571 Intron 5b 96878 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs649180 chr17 37464959 Intron 5b 78490 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.663 FUNCTIONAL_SNP rs1874226 chr17 37729031 Intergenic 5b 185582 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs903507 chr17 37726423 Intergenic 5b 182974 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8182252 chr17 37727950 Intergenic 5b 184501 CEU:1.0;0.847, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11657153 chr17 37699729 Intergenic 5b 156280 CEU:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs8069074 chr17 37685401 Intron 5b 141952 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4795385 chr17 37733148 Intergenic 5b 189699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.959 FUNCTIONAL_SNP rs582176 chr17 37453999 Intron 6 89450 CEU:1.0;0.889, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs1877030 chr17 37740161 Intergenic 6 196712 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.663 FUNCTIONAL_SNP rs6503500 chr17 37485925 Intron 6 57524 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8073907 chr17 37424149 Intron 6 119300 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12150047 chr17 37601755 Intron 6 58306 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9893735 chr17 37469858 Intron 6 73591 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs12938099 chr17 37612910 Intergenic 6 69461 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs7212621 chr17 37527911 Intron 6 15538 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.884 FUNCTIONAL_SNP rs4795358 chr17 37573065 Intron 6 29616 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7503377 chr17 37708841 Intergenic 7 165392 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.63 FUNCTIONAL_SNP rs12947506 chr17 37707592 Intergenic 7 164143 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12449852 chr17 37632088 Intron 7 88639 CEU:1.0;0.827, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs6503513 chr17 37561613 Intron 7 18164 CEU:1.0;0.847, CHB:1.0;0.819, JPT:1.0;0.767 FUNCTIONAL_SNP rs6503521 chr17 37715551 Intergenic 7 172102 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs667239 chr17 37442241 Intron 7 101208 CEU:1.0;1.0, CHB:1.0;0.874, JPT:1.0;1.0 FUNCTIONAL_SNP rs2302073 chr17 37457342 Intron 7 86107 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.783 FUNCTIONAL_SNP rs584377 chr17 37460128 Intron 7 83321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs11655972 chr17 37407072 Intergenic 7 136377 CEU:1.0;1.0, CHB:1.0;0.927, JPT:1.0;0.888, YRI:1.0;1.0 FUNCTIONAL_SNP rs11078894 chr17 37396805 Intergenic 7 146644 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:0.956;0.842 FUNCTIONAL_SNP rs2879258 chr17 37399379 Intergenic 7 144070 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs12937013 chr17 37665571 Intron 7 122122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9646419 chr17 37597185 Intron 7 53736 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12453198 chr17 37741879 Intergenic 7 198430 CEU:1.0;1.0, CHB:1.0;0.576 FUNCTIONAL_SNP rs11657058 chr17 37699378 Intergenic 7 155929 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs9908131 chr17 37520449 Intron 7 23000 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9906612 chr17 37547631 Intron 7 4182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs597069 chr17 37458512 Intron 7 84937 CEU:1.0;1.0, CHB:1.0;0.93, JPT:1.0;1.0, YRI:1.0;0.656 FUNCTIONAL_SNP rs4795379 chr17 37674683 Intron 7 131234 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs907092 chr17 37922259 Coding 5a ASSOCIATION 19458352 Primary biliary cirrhosis 5.09691001301 IKZF3 LEAD_SNP rs9303277 chr17 37976469 Intron 6 ASSOCIATION 20639880 Primary biliary cirrhosis 8.69897000434 IKZF3 LEAD_SNP rs2872507 chr17 38040763 Intergenic 6 ASSOCIATION 21297633 Ulcerative colitis 10.3010299957 ZPBP2 - GSDMB ASSOCIATION 20453842 Rheumatoid arthritis 6.04575749056 ZPBP2 - GSDMB ASSOCIATION 18587394 Crohn's disease 8.30102999566 ZPBP2 - GSDMB FUNCTIONAL_SNP rs11557466 chr17 38024626 Coding 2b 16137 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs11557467 chr17 38028634 Coding 5b 12129 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs907092 chr17 37922259 Coding 5a 118504 CEU:1.0;0.962, CHB:0.89;0.718, JPT:1.0;0.715 FUNCTIONAL_SNP rs2305479 chr17 38062217 Coding 6 21454 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2305480 chr17 38062196 Coding 6 21433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs907091 chr17 37921742 Exon,non-coding 6 119021 CEU:1.0;0.822, CHB:0.95;0.903, JPT:1.0;0.715 FUNCTIONAL_SNP rs12946510 chr17 37912377 Intergenic 2b 128386 CEU:0.96;0.886, CHB:1.0;0.952, JPT:1.0;0.715 FUNCTIONAL_SNP rs4795397 chr17 38023745 Intergenic 4 17018 CEU:1.0;1.0 FUNCTIONAL_SNP rs12936231 chr17 38029120 Intron 4 11643 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9909593 chr17 37970149 Intron 4 70614 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.715 FUNCTIONAL_SNP rs8076131 chr17 38080912 Intron 4 40149 CEU:1.0;0.924, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs7224129 chr17 38075426 Intergenic 5a 34663 CEU:1.0;0.855, CHB:1.0;0.907, JPT:1.0;0.943 FUNCTIONAL_SNP rs8067378 chr17 38051348 Intergenic 5b 10585 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4795400 chr17 38067020 Intron 6 26257 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4795405 chr17 38088417 Intergenic 6 47654 CEU:1.0;0.821, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs3816470 chr17 37985801 Intron 6 54962 CEU:1.0;0.822, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs869402 chr17 38068043 Intron 6 27280 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8069176 chr17 38057197 Intergenic 6 16434 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10852936 chr17 38031714 Intron 6 9049 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.931;0.647 FUNCTIONAL_SNP rs1008723 chr17 38066267 Intron 6 25504 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.79 FUNCTIONAL_SNP rs9901146 chr17 38043343 Intergenic 6 2580 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7359623 chr17 38049589 Intergenic 6 8826 CEU:0.958;0.816, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.509 FUNCTIONAL_SNP rs7219923 chr17 38074518 Intron 6 33755 CEU:1.0;0.855, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs12950743 chr17 38049233 Intergenic 6 8470 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2290400 chr17 38066240 Intron 6 25477 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9303277 chr17 37976469 Intron 6 64294 CEU:1.0;0.855, CHB:1.0;0.952, JPT:1.0;0.715 FUNCTIONAL_SNP rs9303281 chr17 38074046 Intron 6 33283 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11870965 chr17 38030205 Intron 6 10558 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.79 FUNCTIONAL_SNP rs7216389 chr17 38069949 Intron 6 29186 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11078925 chr17 38025208 Intron 6 15555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11078926 chr17 38062976 Intron 6 22213 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11078927 chr17 38064405 Intron 6 23642 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12232497 chr17 38040119 Intergenic 6 644 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9907088 chr17 38035116 Intergenic 6 5647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10445308 chr17 37938047 Intron 6 102716 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.715 LEAD_SNP rs8067378 chr17 38051348 Intergenic 5b ASSOCIATION 20228799 Ulcerative colitis 7.0 ZPBP2 - GSDMB FUNCTIONAL_SNP rs2305479 chr17 38062217 Coding 6 10869 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2305480 chr17 38062196 Coding 6 10848 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs907092 chr17 37922259 Coding 5a 129089 CEU:0.958;0.816, CHB:0.89;0.718, JPT:1.0;0.715 FUNCTIONAL_SNP rs11557467 chr17 38028634 Coding 5b 22714 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11557466 chr17 38024626 Coding 2b 26722 CEU:1.0;0.833, CHB:1.0;1.0, JPT:1.0;0.937 FUNCTIONAL_SNP rs12603332 chr17 38082807 Exon,non-coding 4 31459 CEU:1.0;0.819, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs907091 chr17 37921742 Exon,non-coding 6 129606 CEU:1.0;0.961, CHB:0.95;0.903, JPT:1.0;0.715, YRI:0.951;0.559 FUNCTIONAL_SNP rs4795397 chr17 38023745 Intergenic 4 27603 CEU:1.0;0.818 FUNCTIONAL_SNP rs9909593 chr17 37970149 Intron 4 81199 CEU:1.0;0.855, CHB:1.0;0.952, JPT:1.0;0.715 FUNCTIONAL_SNP rs12936231 chr17 38029120 Intron 4 22228 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.964;0.928 FUNCTIONAL_SNP rs7224129 chr17 38075426 Intergenic 5a 24078 CEU:1.0;1.0, CHB:1.0;0.907, JPT:1.0;0.943 FUNCTIONAL_SNP rs7359623 chr17 38049589 Intergenic 6 1759 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4795400 chr17 38067020 Intron 6 15672 CEU:1.0;0.849, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11078927 chr17 38064405 Intron 6 13057 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9907088 chr17 38035116 Intergenic 6 16232 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3816470 chr17 37985801 Intron 6 65547 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.911;0.597 FUNCTIONAL_SNP rs869402 chr17 38068043 Intron 6 16695 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7216389 chr17 38069949 Intron 6 18601 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12232497 chr17 38040119 Intergenic 6 11229 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10852936 chr17 38031714 Intron 6 19634 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8069176 chr17 38057197 Intergenic 6 5849 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7219923 chr17 38074518 Intron 6 23170 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs11078925 chr17 38025208 Intron 6 26140 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1008723 chr17 38066267 Intron 6 14919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11078926 chr17 38062976 Intron 6 11628 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12950743 chr17 38049233 Intergenic 6 2115 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.516 FUNCTIONAL_SNP rs9901146 chr17 38043343 Intergenic 6 8005 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.505 FUNCTIONAL_SNP rs2290400 chr17 38066240 Intron 6 14892 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2872507 chr17 38040763 Intergenic 6 10585 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9303277 chr17 37976469 Intron 6 74879 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.715, YRI:0.919;0.704 FUNCTIONAL_SNP rs9303280 chr17 38074031 Intron 6 22683 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9303281 chr17 38074046 Intron 6 22698 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11870965 chr17 38030205 Intron 6 21143 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10445308 chr17 37938047 Intron 6 113301 CEU:1.0;0.855, CHB:1.0;0.952, JPT:1.0;0.715 LEAD_SNP rs2305480 chr17 38062196 Coding 6 ASSOCIATION 20860503 Asthma 7.0 GSDMB ASSOCIATION 20228799 Ulcerative colitis 7.52287874528 GSDMB FUNCTIONAL_SNP rs2305479 chr17 38062217 Coding 6 21 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.577 FUNCTIONAL_SNP rs907092 chr17 37922259 Coding 5a 139937 CEU:1.0;0.962, CHB:0.89;0.718, JPT:1.0;0.715 FUNCTIONAL_SNP rs11557467 chr17 38028634 Coding 5b 33562 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11557466 chr17 38024626 Coding 2b 37570 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;1.0 FUNCTIONAL_SNP rs907091 chr17 37921742 Exon,non-coding 6 140454 CEU:1.0;0.822, CHB:0.95;0.903, JPT:1.0;0.715 FUNCTIONAL_SNP rs12946510 chr17 37912377 Intergenic 2b 149819 CEU:0.96;0.886, CHB:1.0;0.952, JPT:1.0;0.715 FUNCTIONAL_SNP rs4795397 chr17 38023745 Intergenic 4 38451 CEU:1.0;1.0 FUNCTIONAL_SNP rs12936231 chr17 38029120 Intron 4 33076 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9909593 chr17 37970149 Intron 4 92047 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.715 FUNCTIONAL_SNP rs8076131 chr17 38080912 Intron 4 18716 CEU:1.0;0.924, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs7224129 chr17 38075426 Intergenic 5a 13230 CEU:1.0;0.855, CHB:1.0;0.907, JPT:1.0;0.943 FUNCTIONAL_SNP rs8067378 chr17 38051348 Intergenic 5b 10848 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7359623 chr17 38049589 Intergenic 6 12607 CEU:0.958;0.816, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4795400 chr17 38067020 Intron 6 4824 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs4795405 chr17 38088417 Intergenic 6 26221 CEU:1.0;0.821, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs11078927 chr17 38064405 Intron 6 2209 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs9907088 chr17 38035116 Intergenic 6 27080 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3816470 chr17 37985801 Intron 6 76395 CEU:1.0;0.822, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs869402 chr17 38068043 Intron 6 5847 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7216389 chr17 38069949 Intron 6 7753 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12232497 chr17 38040119 Intergenic 6 22077 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.824 FUNCTIONAL_SNP rs8069176 chr17 38057197 Intergenic 6 4999 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7219923 chr17 38074518 Intron 6 12322 CEU:1.0;0.855, CHB:1.0;0.952, JPT:1.0;1.0 FUNCTIONAL_SNP rs2872507 chr17 38040763 Intergenic 6 21433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10852936 chr17 38031714 Intron 6 30482 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11078925 chr17 38025208 Intron 6 36988 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1008723 chr17 38066267 Intron 6 4071 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11078926 chr17 38062976 Intron 6 780 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12950743 chr17 38049233 Intergenic 6 12963 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9901146 chr17 38043343 Intergenic 6 18853 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2290400 chr17 38066240 Intron 6 4044 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9303277 chr17 37976469 Intron 6 85727 CEU:1.0;0.855, CHB:1.0;0.952, JPT:1.0;0.715 FUNCTIONAL_SNP rs9303281 chr17 38074046 Intron 6 11850 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11870965 chr17 38030205 Intron 6 31991 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10445308 chr17 37938047 Intron 6 124149 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.715 LEAD_SNP rs2290400 chr17 38066240 Intron 6 ASSOCIATION 19430480 Type 1 diabetes 12.2218487496 GSDMB LEAD_SNP rs7216389 chr17 38069949 Intron 6 ASSOCIATION 17611496 Asthma 10.0457574906 GSDMB LEAD_SNP rs6503525 chr17 38095174 Intergenic 6 ASSOCIATION 21150878 Asthma 6.30102999566 ORMDL3 - GSDMA FUNCTIONAL_SNP rs3894194 chr17 38121993 Coding 5b 26819 CEU:0.959;0.85, CHB:0.951;0.862, JPT:1.0;0.826 FUNCTIONAL_SNP rs4795408 chr17 38107627 Intergenic 5b 12453 CEU:1.0;0.961, CHB:0.953;0.907, JPT:1.0;0.909, YRI:1.0;0.585 FUNCTIONAL_SNP rs8079416 chr17 38092713 Intergenic 6 2461 CEU:1.0;1.0, CHB:1.0;0.83, JPT:1.0;0.867, YRI:1.0;1.0 FUNCTIONAL_SNP rs6503526 chr17 38114598 Intergenic 6 19424 CEU:1.0;0.962, CHB:1.0;0.954, JPT:1.0;0.907 LEAD_SNP rs17609240 chr17 38110689 Intergenic 5b ASSOCIATION 19820697 Hematological parameters 8.04575749056 ORMDL3 - GSDMA FUNCTIONAL_SNP rs1007654 chr17 38111354 Intergenic 4 665 CEU:1.0;0.944, YRI:0.939;0.831 FUNCTIONAL_SNP rs1007655 chr17 38111419 Intergenic 4 730 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8076474 chr17 38111234 Intergenic 4 545 CEU:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs9895948 chr17 38108363 Intergenic 5a 2326 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8065126 chr17 38099035 Intron 5b 11654 CEU:1.0;0.944, YRI:0.839;0.507 FUNCTIONAL_SNP rs6503527 chr17 38114719 Intergenic 6 4030 CEU:1.0;0.938 FUNCTIONAL_SNP rs2313640 chr17 38111845 Intergenic 6 1156 CEU:1.0;0.944, YRI:0.943;0.841 FUNCTIONAL_SNP rs7218321 chr17 38114469 Intergenic 6 3780 CEU:1.0;0.939, YRI:0.916;0.569 FUNCTIONAL_SNP rs7219080 chr17 38114516 Intergenic 6 3827 CEU:1.0;0.944 FUNCTIONAL_SNP rs7207600 chr17 38091660 Intergenic 7 19029 CEU:1.0;0.944, YRI:0.851;0.533 FUNCTIONAL_SNP rs7218742 chr17 38114361 Intergenic 7 3672 CEU:1.0;0.942, YRI:0.851;0.533 LEAD_SNP rs3894194 chr17 38121993 Coding 5b ASSOCIATION 20860503 Asthma 8.30102999566 GSDMA FUNCTIONAL_SNP rs6503526 chr17 38114598 Intergenic 6 7395 CEU:0.96;0.886, CHB:1.0;0.91, JPT:1.0;0.907, YRI:1.0;0.958 LEAD_SNP rs4794822 chr17 38156712 Intergenic 5a ASSOCIATION 21738478 White blood cell types 15.3979400087 PSMD3 - CSF3 ASSOCIATION 20172861 Neutrophil count 9.22184874962 PSMD3 - CSF3 FUNCTIONAL_SNP rs8078723 chr17 38166879 Intergenic 5b 10167 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.888 FUNCTIONAL_SNP rs8070454 chr17 38160754 Intergenic 6 4042 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.888 LEAD_SNP rs7221109 chr17 38770286 Intergenic 6 ASSOCIATION 19430480 Type 1 diabetes 9.0 CCR7 - SMARCE1 FUNCTIONAL_SNP rs11658582 chr17 38763200 Intergenic 3a 7086 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.923;0.851 LEAD_SNP rs2315504 chr17 39046881 Intergenic 6 ASSOCIATION 19893584 Height 5.09691001301 KRT20 - KRT23 LEAD_SNP rs744166 chr17 40514201 Intron 4 ASSOCIATION 20159113 Multiple sclerosis 9.52287874528 STAT3 ASSOCIATION 18587394 Crohn's disease 11.15490196 STAT3 FUNCTIONAL_SNP rs12949918 chr17 40526273 Intron 7 12072 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17885629 chr17 40525098 Intron 7 10897 CEU:1.0;0.959, CHB:1.0;0.901, JPT:1.0;1.0 FUNCTIONAL_SNP rs12942547 chr17 40527544 Intron 7 13343 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1513670 chr17 41807331 Intergenic 7 ASSOCIATION 19079262 Bone mineral density (hip) 7.69897000434 WHSC1L2P - SOST FUNCTIONAL_SNP rs1513669 chr17 41807721 Intergenic 6 390 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs228769 chr17 42193185 Intron 4 ASSOCIATION 19801982 Bone mineral density (hip) 7.69897000434 HDAC5 ASSOCIATION 19801982 Bone mineral density (spine) 5.39794000867 HDAC5 FUNCTIONAL_SNP rs13726 chr17 42239561 Exon,non-coding 6 46376 CEU:1.0;0.808, CHB:1.0;0.592, JPT:0.818;0.525 FUNCTIONAL_SNP rs12937692 chr17 42256430 Exon,non-coding 5b 63245 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.867 LEAD_SNP rs227584 chr17 42225547 Coding 6 ASSOCIATION 19079262 Bone mineral density (hip) 6.04575749056 C17orf53 FUNCTIONAL_SNP rs3826412 chr17 42255097 Exon,non-coding 4 29550 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6503488 chr17 42246158 Intergenic 4 20611 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2246287 chr17 42232442 Intron 5b 6895 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs721769 chr17 42261588 Intron 5b 36041 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12946454 chr17 43208121 Intron 5b ASSOCIATION 19430483 Systolic blood pressure 8.0 ACBD4;PLCD3 FUNCTIONAL_SNP rs4792867 chr17 43249444 Intergenic 2a 41323 CEU:1.0;0.829, YRI:0.787;0.511 FUNCTIONAL_SNP rs11657325 chr17 43242694 Intron 2b 34573 CEU:1.0;1.0, CHB:1.0;0.93, JPT:1.0;0.806, YRI:0.787;0.511 FUNCTIONAL_SNP rs4792819 chr17 43247957 Intergenic 4 39836 CEU:1.0;0.881, YRI:0.787;0.511 FUNCTIONAL_SNP rs11651809 chr17 43255681 Intergenic 5b 47560 CEU:1.0;0.84, YRI:0.789;0.515 LEAD_SNP rs4986172 chr17 43216281 Intron 7 ASSOCIATION 20881960 Height 15.6989700043 ACBD4 LEAD_SNP rs11012 chr17 43513441 Coding 5b ASSOCIATION 20070850 Parkinson's disease 7.22184874962 PLEKHM1;SH3D20 FUNCTIONAL_SNP rs9730 chr17 43513551 Exon,non-coding 5b 110 CEU:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs34018943 chr17 43508303 Intron 4 5138 CEU:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs12947718 chr17 43493101 Intron 5b 20340 CEU:1.0;1.0 FUNCTIONAL_SNP rs2077606 chr17 43529293 Intron 5b 15852 CEU:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs7222389 chr17 43501442 Intron 5b 11999 CEU:1.0;1.0 FUNCTIONAL_SNP rs12942666 chr17 43499839 Intron 6 13602 CEU:1.0;1.0 FUNCTIONAL_SNP rs17631676 chr17 43549526 Intron 6 36085 CEU:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs3946526 chr17 43541656 Intron 6 28215 CEU:1.0;1.0 LEAD_SNP rs2942168 chr17 43714850 Exon,non-coding 6 ASSOCIATION 21292315 Parkinson's disease 28.0 MGC57346 FUNCTIONAL_SNP rs16940665 chr17 43907896 Coding 5b 193046 CEU:1.0;1.0 FUNCTIONAL_SNP rs16940674 chr17 43910507 Coding 5b 195657 CEU:1.0;1.0 FUNCTIONAL_SNP rs393152 chr17 43719143 Coding 5b 4293 CEU:1.0;1.0 FUNCTIONAL_SNP rs2942167 chr17 43715018 Exon,non-coding 6 168 CEU:1.0;1.0 FUNCTIONAL_SNP rs439558 chr17 43717803 Exon,non-coding 2b 2953 CEU:1.0;1.0 FUNCTIONAL_SNP rs878886 chr17 43912490 Exon,non-coding 4 197640 CEU:1.0;1.0 FUNCTIONAL_SNP rs878887 chr17 43912582 Exon,non-coding 4 197732 CEU:1.0;0.892 FUNCTIONAL_SNP rs241039 chr17 43714673 Exon,non-coding 6 177 CEU:1.0;1.0 FUNCTIONAL_SNP rs241041 chr17 43713925 Exon,non-coding 6 925 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687625 chr17 43750238 Exon,non-coding 5b 35388 CEU:1.0;1.0 FUNCTIONAL_SNP rs4640231 chr17 43912786 Exon,non-coding 5b 197936 CEU:0.94;0.883 FUNCTIONAL_SNP rs1526125 chr17 43812177 Intron 2b 97327 CEU:1.0;1.0 FUNCTIONAL_SNP rs1526126 chr17 43812218 Intron 2b 97368 CEU:1.0;1.0 FUNCTIONAL_SNP rs2864087 chr17 43807063 Intron 3b 92213 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688068 chr17 43763935 Intron 4 49085 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762308 chr17 43780948 Intron 4 66098 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563827 chr17 43818222 Intron 4 103372 CEU:1.0;1.0 FUNCTIONAL_SNP rs385691 chr17 43726125 Intron 4 11275 CEU:1.0;1.0 FUNCTIONAL_SNP rs17760577 chr17 43741452 Intron 4 26602 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762535 chr17 43787130 Intron 4 72280 CEU:1.0;1.0 FUNCTIONAL_SNP rs241033 chr17 43733983 Intron 4 19133 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762769 chr17 43893403 Intron 4 178553 CEU:1.0;1.0 FUNCTIONAL_SNP rs1724411 chr17 43669931 Intergenic 4 44919 CEU:1.0;0.947 FUNCTIONAL_SNP rs6503443 chr17 43765881 Intron 5a 51031 CEU:1.0;0.947 FUNCTIONAL_SNP rs17563800 chr17 43817459 Intron 5a 102609 CEU:1.0;1.0 FUNCTIONAL_SNP rs4390635 chr17 43809016 Intron 5a 94166 CEU:1.0;1.0 FUNCTIONAL_SNP rs4471726 chr17 43807134 Intron 5a 92284 CEU:1.0;1.0 FUNCTIONAL_SNP rs11079717 chr17 43835351 Intron 5b 120501 CEU:1.0;1.0 FUNCTIONAL_SNP rs11079718 chr17 43839951 Intron 5b 125101 CEU:1.0;0.947 FUNCTIONAL_SNP rs11079720 chr17 43840016 Intron 5b 125166 CEU:1.0;0.941 FUNCTIONAL_SNP rs11079721 chr17 43840107 Intron 5b 125257 CEU:1.0;1.0 FUNCTIONAL_SNP rs11079724 chr17 43841912 Intron 5b 127062 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689653 chr17 43898963 Intron 5b 184113 CEU:1.0;1.0 FUNCTIONAL_SNP rs413778 chr17 43716885 Intron 5b 2035 CEU:1.0;1.0 FUNCTIONAL_SNP rs436667 chr17 43709415 Intron 5b 5435 CEU:1.0;1.0 FUNCTIONAL_SNP rs1396862 chr17 43902997 Intron 5b 188147 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761387 chr17 43765450 Intron 5b 50600 CEU:1.0;1.0 FUNCTIONAL_SNP rs16940677 chr17 43911898 Intron 5b 197048 CEU:1.0;1.0 FUNCTIONAL_SNP rs2902662 chr17 43806925 Intron 5b 92075 CEU:1.0;1.0 FUNCTIONAL_SNP rs2668680 chr17 43659975 Intergenic 5b 54875 CEU:1.0;0.945 FUNCTIONAL_SNP rs439945 chr17 43726659 Intron 5b 11809 CEU:1.0;0.812 FUNCTIONAL_SNP rs17762954 chr17 43899786 Intron 5b 184936 CEU:1.0;1.0 FUNCTIONAL_SNP rs4277389 chr17 43895653 Intron 5b 180803 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687667 chr17 43754099 Intron 5b 39249 CEU:1.0;1.0 FUNCTIONAL_SNP rs1880750 chr17 43796541 Intron 5b 81691 CEU:1.0;1.0 FUNCTIONAL_SNP rs4566211 chr17 43895696 Intron 5b 180846 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563433 chr17 43800351 Intron 5b 85501 CEU:1.0;1.0 FUNCTIONAL_SNP rs2942169 chr17 43711539 Intron 5b 3311 CEU:1.0;1.0 FUNCTIONAL_SNP rs422112 chr17 43728137 Intron 5b 13287 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689471 chr17 43892973 Intron 5b 178123 CEU:1.0;1.0 FUNCTIONAL_SNP rs365825 chr17 43705601 Intron 5b 9249 CEU:1.0;1.0 FUNCTIONAL_SNP rs8072451 chr17 43893716 Intron 5b 178866 CEU:1.0;1.0 FUNCTIONAL_SNP rs366858 chr17 43726588 Intron 5b 11738 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150658 chr17 43826305 Intron 5b 111455 CEU:1.0;1.0 FUNCTIONAL_SNP rs17763086 chr17 43905481 Intron 5b 190631 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150547 chr17 43775546 Intron 5b 60696 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761046 chr17 43758382 Intron 5b 43532 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689882 chr17 43906828 Intron 5b 191978 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687838 chr17 43759048 Intron 5b 44198 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689824 chr17 43904397 Intron 5b 189547 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150610 chr17 43775479 Intron 5b 60629 CEU:1.0;1.0 FUNCTIONAL_SNP rs1912151 chr17 43902944 Intron 5b 188094 CEU:1.0;1.0 FUNCTIONAL_SNP rs1630095 chr17 43750172 Intron 5b 35322 CEU:1.0;0.947 FUNCTIONAL_SNP rs1876829 chr17 43911443 Intron 5b 196593 CEU:1.0;1.0 FUNCTIONAL_SNP rs1876831 chr17 43907745 Intron 5b 192895 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687571 chr17 43750010 Intron 5b 35160 CEU:1.0;1.0 FUNCTIONAL_SNP rs455028 chr17 43726574 Intron 5b 11724 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689918 chr17 43910088 Intron 5b 195238 CEU:1.0;1.0 FUNCTIONAL_SNP rs241020 chr17 43738676 Intron 5b 23826 CEU:1.0;1.0 FUNCTIONAL_SNP rs241021 chr17 43738627 Intron 5b 23777 CEU:1.0;1.0 FUNCTIONAL_SNP rs241030 chr17 43734503 Intron 5b 19653 CEU:1.0;0.92 FUNCTIONAL_SNP rs241031 chr17 43734304 Intron 5b 19454 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150672 chr17 43826637 Intron 5b 111787 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687534 chr17 43749579 Intron 5b 34729 CEU:1.0;1.0 FUNCTIONAL_SNP rs4401083 chr17 43806015 Intron 5b 91165 CEU:1.0;1.0 FUNCTIONAL_SNP rs1635288 chr17 43756969 Intron 5b 42119 CEU:1.0;0.89 FUNCTIONAL_SNP rs4074462 chr17 43855228 Intron 5b 140378 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687462 chr17 43744990 Intron 5b 30140 CEU:1.0;1.0 FUNCTIONAL_SNP rs434428 chr17 43725684 Intron 5b 10834 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649162 chr17 43810371 Intron 6 95521 CEU:1.0;1.0 FUNCTIONAL_SNP rs2040845 chr17 43767188 Intron 6 52338 CEU:1.0;1.0 FUNCTIONAL_SNP rs2040846 chr17 43762846 Intron 6 47996 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689104 chr17 43782492 Intron 6 67642 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688090 chr17 43764987 Intron 6 50137 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689116 chr17 43782558 Intron 6 67708 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688410 chr17 43772251 Intron 6 57401 CEU:1.0;1.0 FUNCTIONAL_SNP rs1880752 chr17 43806264 Intron 6 91414 CEU:1.0;1.0 FUNCTIONAL_SNP rs968027 chr17 43781250 Intron 6 66400 CEU:1.0;1.0 FUNCTIONAL_SNP rs11079719 chr17 43840006 Intron 6 125156 CEU:1.0;0.947 FUNCTIONAL_SNP rs11079723 chr17 43841729 Intron 6 126879 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761838 chr17 43774959 Intron 6 60109 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762361 chr17 43781778 Intron 6 66928 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563718 chr17 43811673 Intron 6 96823 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563923 chr17 43819450 Intron 6 104600 CEU:1.0;1.0 FUNCTIONAL_SNP rs2959945 chr17 43575228 Intergenic 6 139622 CEU:1.0;0.943 FUNCTIONAL_SNP rs418891 chr17 43693538 Intergenic 6 21312 CEU:1.0;1.0 FUNCTIONAL_SNP rs17334797 chr17 43825912 Intron 6 111062 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689182 chr17 43783573 Intron 6 68723 CEU:1.0;1.0 FUNCTIONAL_SNP rs389217 chr17 43717131 Intron 6 2281 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688682 chr17 43775929 Intron 6 61079 CEU:1.0;1.0 FUNCTIONAL_SNP rs16941035 chr17 43761519 Intron 6 46669 CEU:1.0;0.947 FUNCTIONAL_SNP rs17334894 chr17 43827209 Intron 6 112359 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688944 chr17 43779419 Intron 6 64569 CEU:1.0;1.0 FUNCTIONAL_SNP rs17426195 chr17 43832367 Intron 6 117517 CEU:1.0;1.0 FUNCTIONAL_SNP rs7215239 chr17 43767773 Intron 6 52923 CEU:1.0;0.94 FUNCTIONAL_SNP rs17563787 chr17 43813252 Intron 6 98402 CEU:1.0;1.0 FUNCTIONAL_SNP rs453997 chr17 43727061 Intron 6 12211 CEU:1.0;1.0 FUNCTIONAL_SNP rs17426064 chr17 43828698 Intron 6 113848 CEU:1.0;1.0 FUNCTIONAL_SNP rs413844 chr17 43729384 Intron 6 14534 CEU:1.0;0.941 FUNCTIONAL_SNP rs17689218 chr17 43785808 Intron 6 70958 CEU:1.0;1.0 FUNCTIONAL_SNP rs17334944 chr17 43828617 Intron 6 113767 CEU:1.0;1.0 FUNCTIONAL_SNP rs1105571 chr17 43793200 Intron 6 78350 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150451 chr17 43827431 Intron 6 112581 CEU:1.0;1.0 FUNCTIONAL_SNP rs4617909 chr17 43806451 Intron 6 91601 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150454 chr17 43776061 Intron 6 61211 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150455 chr17 43827508 Intron 6 112658 CEU:1.0;1.0 FUNCTIONAL_SNP rs17426106 chr17 43828935 Intron 6 114085 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687740 chr17 43756376 Intron 6 41526 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688767 chr17 43777542 Intron 6 62692 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150464 chr17 43776371 Intron 6 61521 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761985 chr17 43776787 Intron 6 61937 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688773 chr17 43777710 Intron 6 62860 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563501 chr17 43801695 Intron 6 86845 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563683 chr17 43811072 Intron 6 96222 CEU:1.0;1.0 FUNCTIONAL_SNP rs2942164 chr17 43721283 Intron 6 6433 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563861 chr17 43818906 Intron 6 104056 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688296 chr17 43767815 Intron 6 52965 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696425 chr17 43666906 Intergenic 6 47944 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150141 chr17 43775145 Intron 6 60295 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563889 chr17 43818946 Intron 6 104096 CEU:1.0;1.0 FUNCTIONAL_SNP rs757500 chr17 43756833 Intron 6 41983 CEU:1.0;1.0 FUNCTIONAL_SNP rs757501 chr17 43756685 Intron 6 41835 CEU:1.0;1.0 FUNCTIONAL_SNP rs757502 chr17 43756506 Intron 6 41656 CEU:1.0;1.0 FUNCTIONAL_SNP rs10491143 chr17 43773248 Intron 6 58398 CEU:1.0;1.0 FUNCTIONAL_SNP rs10491144 chr17 43773124 Intron 6 58274 CEU:1.0;1.0 FUNCTIONAL_SNP rs383241 chr17 43705356 Intron 6 9494 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762073 chr17 43777745 Intron 6 62895 CEU:1.0;1.0 FUNCTIONAL_SNP rs2463519 chr17 43656895 Intergenic 6 57955 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150048 chr17 43827471 Intron 6 112621 CEU:0.943;0.89 FUNCTIONAL_SNP rs4486953 chr17 43763007 Intron 6 48157 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688875 chr17 43778406 Intron 6 63556 CEU:1.0;1.0 FUNCTIONAL_SNP rs17760733 chr17 43746276 Intron 6 31426 CEU:1.0;1.0 FUNCTIONAL_SNP rs424243 chr17 43727887 Intron 6 13037 CEU:1.0;1.0 FUNCTIONAL_SNP rs647483 chr17 43729432 Intron 6 14582 CEU:1.0;1.0 FUNCTIONAL_SNP rs448830 chr17 43725212 Intron 6 10362 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688391 chr17 43772109 Intron 6 57259 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150604 chr17 43828221 Intron 6 113371 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688205 chr17 43766352 Intron 6 51502 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688916 chr17 43778680 Intron 6 63830 CEU:1.0;0.892 FUNCTIONAL_SNP rs3418 chr17 43723462 Intron 6 8612 CEU:1.0;1.0 FUNCTIONAL_SNP rs968028 chr17 43781105 Intron 6 66255 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761124 chr17 43760516 Intron 6 45666 CEU:1.0;0.945 FUNCTIONAL_SNP rs1526128 chr17 43779624 Intron 6 64774 CEU:1.0;0.941 FUNCTIONAL_SNP rs1526129 chr17 43779657 Intron 6 64807 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688434 chr17 43772540 Intron 6 57690 CEU:1.0;1.0 FUNCTIONAL_SNP rs17760631 chr17 43743045 Intron 6 28195 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649019 chr17 43801593 Intron 6 86743 CEU:1.0;1.0 FUNCTIONAL_SNP rs241022 chr17 43737730 Intron 6 22880 CEU:1.0;1.0 FUNCTIONAL_SNP rs241023 chr17 43737040 Intron 6 22190 CEU:1.0;1.0 FUNCTIONAL_SNP rs241026 chr17 43735555 Intron 6 20705 CEU:1.0;1.0 FUNCTIONAL_SNP rs241027 chr17 43735478 Intron 6 20628 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688452 chr17 43773085 Intron 6 58235 CEU:1.0;1.0 FUNCTIONAL_SNP rs2158474 chr17 43761939 Intron 6 47089 CEU:1.0;1.0 FUNCTIONAL_SNP rs241035 chr17 43731896 Intron 6 17046 CEU:1.0;1.0 FUNCTIONAL_SNP rs241036 chr17 43731719 Intron 6 16869 CEU:1.0;1.0 FUNCTIONAL_SNP rs241044 chr17 43712464 Intron 6 2386 CEU:0.931;0.81 FUNCTIONAL_SNP rs12150683 chr17 43824848 Intron 6 109998 CEU:1.0;0.941 FUNCTIONAL_SNP rs17761207 chr17 43762255 Intron 6 47405 CEU:1.0;1.0 FUNCTIONAL_SNP rs10514879 chr17 43802971 Intron 6 88121 CEU:1.0;0.947 FUNCTIONAL_SNP rs17688002 chr17 43762594 Intron 6 47744 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761100 chr17 43760389 Intron 6 45539 CEU:1.0;1.0 FUNCTIONAL_SNP rs7207373 chr17 43770712 Intron 6 55862 CEU:1.0;0.943 FUNCTIONAL_SNP rs17563599 chr17 43807955 Intron 6 93105 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687504 chr17 43746721 Intron 6 31871 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688534 chr17 43773877 Intron 6 59027 CEU:1.0;1.0 FUNCTIONAL_SNP rs1635291 chr17 43751913 Intron 6 37063 CEU:1.0;0.943 FUNCTIONAL_SNP rs17688922 chr17 43779351 Intron 6 64501 CEU:1.0;1.0 FUNCTIONAL_SNP rs449501 chr17 43724555 Intron 6 9705 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688032 chr17 43763202 Intron 6 48352 CEU:1.0;1.0 FUNCTIONAL_SNP rs1635298 chr17 43744344 Intron 6 29494 CEU:0.945;0.892 FUNCTIONAL_SNP rs2049515 chr17 43761856 Intron 6 47006 CEU:1.0;1.0 FUNCTIONAL_SNP rs16941038 chr17 43761565 Intron 6 46715 CEU:1.0;0.945 FUNCTIONAL_SNP rs1724400 chr17 43755871 Intron 6 41021 CEU:1.0;0.942 FUNCTIONAL_SNP rs1724401 chr17 43755857 Intron 6 41007 CEU:1.0;0.938 FUNCTIONAL_SNP rs17649138 chr17 43808067 Intron 6 93217 CEU:1.0;1.0 FUNCTIONAL_SNP rs17426174 chr17 43830938 Intron 6 116088 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762165 chr17 43778602 Intron 6 63752 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688056 chr17 43763241 Intron 6 48391 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687849 chr17 43759719 Intron 6 44869 CEU:1.0;1.0 LEAD_SNP rs393152 chr17 43719143 Coding 5b ASSOCIATION 19915575 Parkinson's disease 15.6989700043 C17orf69 FUNCTIONAL_SNP rs16940665 chr17 43907896 Coding 5b 188753 CEU:1.0;1.0 FUNCTIONAL_SNP rs16940674 chr17 43910507 Coding 5b 191364 CEU:1.0;1.0 FUNCTIONAL_SNP rs2942167 chr17 43715018 Exon,non-coding 6 4125 CEU:1.0;1.0 FUNCTIONAL_SNP rs2942168 chr17 43714850 Exon,non-coding 6 4293 CEU:1.0;1.0 FUNCTIONAL_SNP rs439558 chr17 43717803 Exon,non-coding 2b 1340 CEU:1.0;1.0 FUNCTIONAL_SNP rs878886 chr17 43912490 Exon,non-coding 4 193347 CEU:1.0;1.0 FUNCTIONAL_SNP rs878887 chr17 43912582 Exon,non-coding 4 193439 CEU:1.0;0.883 FUNCTIONAL_SNP rs241039 chr17 43714673 Exon,non-coding 6 4470 CEU:1.0;1.0 FUNCTIONAL_SNP rs241041 chr17 43713925 Exon,non-coding 6 5218 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687625 chr17 43750238 Exon,non-coding 5b 31095 CEU:1.0;1.0 FUNCTIONAL_SNP rs4640231 chr17 43912786 Exon,non-coding 5b 193643 CEU:0.94;0.883 FUNCTIONAL_SNP rs1526125 chr17 43812177 Intron 2b 93034 CEU:1.0;1.0 FUNCTIONAL_SNP rs1526126 chr17 43812218 Intron 2b 93075 CEU:1.0;1.0 FUNCTIONAL_SNP rs2864087 chr17 43807063 Intron 3b 87920 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688068 chr17 43763935 Intron 4 44792 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762308 chr17 43780948 Intron 4 61805 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563827 chr17 43818222 Intron 4 99079 CEU:1.0;1.0 FUNCTIONAL_SNP rs385691 chr17 43726125 Intron 4 6982 CEU:1.0;1.0 FUNCTIONAL_SNP rs17760577 chr17 43741452 Intron 4 22309 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762535 chr17 43787130 Intron 4 67987 CEU:1.0;1.0 FUNCTIONAL_SNP rs241033 chr17 43733983 Intron 4 14840 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762769 chr17 43893403 Intron 4 174260 CEU:1.0;1.0 FUNCTIONAL_SNP rs1724411 chr17 43669931 Intergenic 4 49212 CEU:1.0;0.943, YRI:1.0;0.783 FUNCTIONAL_SNP rs6503443 chr17 43765881 Intron 5a 46738 CEU:1.0;0.943 FUNCTIONAL_SNP rs17563800 chr17 43817459 Intron 5a 98316 CEU:1.0;1.0 FUNCTIONAL_SNP rs4390635 chr17 43809016 Intron 5a 89873 CEU:1.0;1.0 FUNCTIONAL_SNP rs4471726 chr17 43807134 Intron 5a 87991 CEU:1.0;1.0 FUNCTIONAL_SNP rs11079717 chr17 43835351 Intron 5b 116208 CEU:1.0;1.0 FUNCTIONAL_SNP rs11079718 chr17 43839951 Intron 5b 120808 CEU:1.0;0.943 FUNCTIONAL_SNP rs11079720 chr17 43840016 Intron 5b 120873 CEU:1.0;0.935 FUNCTIONAL_SNP rs11079721 chr17 43840107 Intron 5b 120964 CEU:1.0;1.0 FUNCTIONAL_SNP rs11079724 chr17 43841912 Intron 5b 122769 CEU:1.0;1.0 FUNCTIONAL_SNP rs10445364 chr17 43916356 Intergenic 5b 197213 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689653 chr17 43898963 Intron 5b 179820 CEU:1.0;1.0 FUNCTIONAL_SNP rs413778 chr17 43716885 Intron 5b 2258 CEU:1.0;1.0 FUNCTIONAL_SNP rs4401083 chr17 43806015 Intron 5b 86872 CEU:1.0;1.0 FUNCTIONAL_SNP rs1396862 chr17 43902997 Intron 5b 183854 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761387 chr17 43765450 Intron 5b 46307 CEU:1.0;1.0 FUNCTIONAL_SNP rs16940677 chr17 43911898 Intron 5b 192755 CEU:1.0;1.0 FUNCTIONAL_SNP rs2902662 chr17 43806925 Intron 5b 87782 CEU:1.0;1.0 FUNCTIONAL_SNP rs2668680 chr17 43659975 Intergenic 5b 59168 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762954 chr17 43899786 Intron 5b 180643 CEU:1.0;1.0 FUNCTIONAL_SNP rs4277389 chr17 43895653 Intron 5b 176510 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687667 chr17 43754099 Intron 5b 34956 CEU:1.0;1.0 FUNCTIONAL_SNP rs1880750 chr17 43796541 Intron 5b 77398 CEU:1.0;1.0 FUNCTIONAL_SNP rs4566211 chr17 43895696 Intron 5b 176553 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563433 chr17 43800351 Intron 5b 81208 CEU:1.0;1.0 FUNCTIONAL_SNP rs2942169 chr17 43711539 Intron 5b 7604 CEU:1.0;1.0 FUNCTIONAL_SNP rs422112 chr17 43728137 Intron 5b 8994 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689471 chr17 43892973 Intron 5b 173830 CEU:1.0;1.0 FUNCTIONAL_SNP rs365825 chr17 43705601 Intron 5b 13542 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8072451 chr17 43893716 Intron 5b 174573 CEU:1.0;1.0 FUNCTIONAL_SNP rs366858 chr17 43726588 Intron 5b 7445 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150658 chr17 43826305 Intron 5b 107162 CEU:1.0;1.0 FUNCTIONAL_SNP rs17763086 chr17 43905481 Intron 5b 186338 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150547 chr17 43775546 Intron 5b 56403 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761046 chr17 43758382 Intron 5b 39239 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689882 chr17 43906828 Intron 5b 187685 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687838 chr17 43759048 Intron 5b 39905 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689824 chr17 43904397 Intron 5b 185254 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150610 chr17 43775479 Intron 5b 56336 CEU:1.0;1.0 FUNCTIONAL_SNP rs1912151 chr17 43902944 Intron 5b 183801 CEU:1.0;1.0 FUNCTIONAL_SNP rs1630095 chr17 43750172 Intron 5b 31029 CEU:1.0;0.943 FUNCTIONAL_SNP rs1876829 chr17 43911443 Intron 5b 192300 CEU:1.0;1.0 FUNCTIONAL_SNP rs1876831 chr17 43907745 Intron 5b 188602 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687571 chr17 43750010 Intron 5b 30867 CEU:1.0;1.0 FUNCTIONAL_SNP rs455028 chr17 43726574 Intron 5b 7431 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689918 chr17 43910088 Intron 5b 190945 CEU:1.0;1.0 FUNCTIONAL_SNP rs241020 chr17 43738676 Intron 5b 19533 CEU:1.0;1.0 FUNCTIONAL_SNP rs241021 chr17 43738627 Intron 5b 19484 CEU:1.0;1.0 FUNCTIONAL_SNP rs241030 chr17 43734503 Intron 5b 15360 CEU:1.0;0.92 FUNCTIONAL_SNP rs241031 chr17 43734304 Intron 5b 15161 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150672 chr17 43826637 Intron 5b 107494 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687534 chr17 43749579 Intron 5b 30436 CEU:1.0;1.0 FUNCTIONAL_SNP rs436667 chr17 43709415 Intron 5b 9728 CEU:1.0;1.0 FUNCTIONAL_SNP rs1635288 chr17 43756969 Intron 5b 37826 CEU:1.0;0.89 FUNCTIONAL_SNP rs4074462 chr17 43855228 Intron 5b 136085 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687462 chr17 43744990 Intron 5b 25847 CEU:1.0;1.0 FUNCTIONAL_SNP rs434428 chr17 43725684 Intron 5b 6541 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649162 chr17 43810371 Intron 6 91228 CEU:1.0;1.0 FUNCTIONAL_SNP rs2040845 chr17 43767188 Intron 6 48045 CEU:1.0;1.0 FUNCTIONAL_SNP rs2040846 chr17 43762846 Intron 6 43703 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689104 chr17 43782492 Intron 6 63349 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688090 chr17 43764987 Intron 6 45844 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689116 chr17 43782558 Intron 6 63415 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688410 chr17 43772251 Intron 6 53108 CEU:1.0;1.0 FUNCTIONAL_SNP rs1880752 chr17 43806264 Intron 6 87121 CEU:1.0;1.0 FUNCTIONAL_SNP rs968027 chr17 43781250 Intron 6 62107 CEU:1.0;1.0 FUNCTIONAL_SNP rs11079719 chr17 43840006 Intron 6 120863 CEU:1.0;0.943 FUNCTIONAL_SNP rs11079723 chr17 43841729 Intron 6 122586 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761838 chr17 43774959 Intron 6 55816 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762361 chr17 43781778 Intron 6 62635 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563718 chr17 43811673 Intron 6 92530 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563923 chr17 43819450 Intron 6 100307 CEU:1.0;1.0 FUNCTIONAL_SNP rs2959945 chr17 43575228 Intergenic 6 143915 CEU:1.0;0.938, YRI:1.0;0.558 FUNCTIONAL_SNP rs418891 chr17 43693538 Intergenic 6 25605 CEU:1.0;1.0 FUNCTIONAL_SNP rs17334797 chr17 43825912 Intron 6 106769 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689182 chr17 43783573 Intron 6 64430 CEU:1.0;1.0 FUNCTIONAL_SNP rs389217 chr17 43717131 Intron 6 2012 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688682 chr17 43775929 Intron 6 56786 CEU:1.0;1.0 FUNCTIONAL_SNP rs16941035 chr17 43761519 Intron 6 42376 CEU:1.0;0.943 FUNCTIONAL_SNP rs17334894 chr17 43827209 Intron 6 108066 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688944 chr17 43779419 Intron 6 60276 CEU:1.0;1.0 FUNCTIONAL_SNP rs17763533 chr17 43918190 Intergenic 6 199047 CEU:1.0;1.0 FUNCTIONAL_SNP rs7215239 chr17 43767773 Intron 6 48630 CEU:1.0;0.94 FUNCTIONAL_SNP rs17563787 chr17 43813252 Intron 6 94109 CEU:1.0;1.0 FUNCTIONAL_SNP rs453997 chr17 43727061 Intron 6 7918 CEU:1.0;1.0 FUNCTIONAL_SNP rs17426064 chr17 43828698 Intron 6 109555 CEU:1.0;1.0 FUNCTIONAL_SNP rs413844 chr17 43729384 Intron 6 10241 CEU:1.0;0.94 FUNCTIONAL_SNP rs17689218 chr17 43785808 Intron 6 66665 CEU:1.0;1.0 FUNCTIONAL_SNP rs17334944 chr17 43828617 Intron 6 109474 CEU:1.0;1.0 FUNCTIONAL_SNP rs1105571 chr17 43793200 Intron 6 74057 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150451 chr17 43827431 Intron 6 108288 CEU:1.0;1.0 FUNCTIONAL_SNP rs4617909 chr17 43806451 Intron 6 87308 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150454 chr17 43776061 Intron 6 56918 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150455 chr17 43827508 Intron 6 108365 CEU:1.0;1.0 FUNCTIONAL_SNP rs17426106 chr17 43828935 Intron 6 109792 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687740 chr17 43756376 Intron 6 37233 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688767 chr17 43777542 Intron 6 58399 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150464 chr17 43776371 Intron 6 57228 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761985 chr17 43776787 Intron 6 57644 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688773 chr17 43777710 Intron 6 58567 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563501 chr17 43801695 Intron 6 82552 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563683 chr17 43811072 Intron 6 91929 CEU:1.0;1.0 FUNCTIONAL_SNP rs2942164 chr17 43721283 Intron 6 2140 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563861 chr17 43818906 Intron 6 99763 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688296 chr17 43767815 Intron 6 48672 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696425 chr17 43666906 Intergenic 6 52237 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150141 chr17 43775145 Intron 6 56002 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563889 chr17 43818946 Intron 6 99803 CEU:1.0;1.0 FUNCTIONAL_SNP rs757500 chr17 43756833 Intron 6 37690 CEU:1.0;1.0 FUNCTIONAL_SNP rs757501 chr17 43756685 Intron 6 37542 CEU:1.0;1.0 FUNCTIONAL_SNP rs757502 chr17 43756506 Intron 6 37363 CEU:1.0;1.0 FUNCTIONAL_SNP rs10491143 chr17 43773248 Intron 6 54105 CEU:1.0;1.0 FUNCTIONAL_SNP rs10491144 chr17 43773124 Intron 6 53981 CEU:1.0;1.0 FUNCTIONAL_SNP rs383241 chr17 43705356 Intron 6 13787 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762073 chr17 43777745 Intron 6 58602 CEU:1.0;1.0 FUNCTIONAL_SNP rs2463519 chr17 43656895 Intergenic 6 62248 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150048 chr17 43827471 Intron 6 108328 CEU:0.938;0.88 FUNCTIONAL_SNP rs4486953 chr17 43763007 Intron 6 43864 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688875 chr17 43778406 Intron 6 59263 CEU:1.0;1.0 FUNCTIONAL_SNP rs424243 chr17 43727887 Intron 6 8744 CEU:1.0;1.0 FUNCTIONAL_SNP rs647483 chr17 43729432 Intron 6 10289 CEU:1.0;1.0 FUNCTIONAL_SNP rs448830 chr17 43725212 Intron 6 6069 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688391 chr17 43772109 Intron 6 52966 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150604 chr17 43828221 Intron 6 109078 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688205 chr17 43766352 Intron 6 47209 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688916 chr17 43778680 Intron 6 59537 CEU:1.0;0.941 FUNCTIONAL_SNP rs3418 chr17 43723462 Intron 6 4319 CEU:1.0;1.0 FUNCTIONAL_SNP rs968028 chr17 43781105 Intron 6 61962 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761124 chr17 43760516 Intron 6 41373 CEU:1.0;0.941 FUNCTIONAL_SNP rs1526128 chr17 43779624 Intron 6 60481 CEU:1.0;0.941 FUNCTIONAL_SNP rs1526129 chr17 43779657 Intron 6 60514 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688434 chr17 43772540 Intron 6 53397 CEU:1.0;1.0 FUNCTIONAL_SNP rs17760631 chr17 43743045 Intron 6 23902 CEU:1.0;1.0 FUNCTIONAL_SNP rs17426195 chr17 43832367 Intron 6 113224 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649019 chr17 43801593 Intron 6 82450 CEU:1.0;1.0 FUNCTIONAL_SNP rs241022 chr17 43737730 Intron 6 18587 CEU:1.0;1.0 FUNCTIONAL_SNP rs241023 chr17 43737040 Intron 6 17897 CEU:1.0;1.0 FUNCTIONAL_SNP rs241026 chr17 43735555 Intron 6 16412 CEU:1.0;1.0 FUNCTIONAL_SNP rs241027 chr17 43735478 Intron 6 16335 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688452 chr17 43773085 Intron 6 53942 CEU:1.0;1.0 FUNCTIONAL_SNP rs2158474 chr17 43761939 Intron 6 42796 CEU:1.0;1.0 FUNCTIONAL_SNP rs241035 chr17 43731896 Intron 6 12753 CEU:1.0;1.0 FUNCTIONAL_SNP rs241036 chr17 43731719 Intron 6 12576 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150683 chr17 43824848 Intron 6 105705 CEU:1.0;0.936 FUNCTIONAL_SNP rs17761207 chr17 43762255 Intron 6 43112 CEU:1.0;1.0 FUNCTIONAL_SNP rs10514879 chr17 43802971 Intron 6 83828 CEU:1.0;0.943 FUNCTIONAL_SNP rs17688002 chr17 43762594 Intron 6 43451 CEU:1.0;1.0 FUNCTIONAL_SNP rs17761100 chr17 43760389 Intron 6 41246 CEU:1.0;1.0 FUNCTIONAL_SNP rs440778 chr17 43686420 Intergenic 6 32723 CEU:0.915;0.837 FUNCTIONAL_SNP rs7207373 chr17 43770712 Intron 6 51569 CEU:1.0;0.943 FUNCTIONAL_SNP rs17563599 chr17 43807955 Intron 6 88812 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687504 chr17 43746721 Intron 6 27578 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688534 chr17 43773877 Intron 6 54734 CEU:1.0;1.0 FUNCTIONAL_SNP rs1635291 chr17 43751913 Intron 6 32770 CEU:1.0;0.943 FUNCTIONAL_SNP rs17688922 chr17 43779351 Intron 6 60208 CEU:1.0;1.0 FUNCTIONAL_SNP rs449501 chr17 43724555 Intron 6 5412 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688032 chr17 43763202 Intron 6 44059 CEU:1.0;1.0 FUNCTIONAL_SNP rs1635298 chr17 43744344 Intron 6 25201 CEU:0.94;0.883 FUNCTIONAL_SNP rs2049515 chr17 43761856 Intron 6 42713 CEU:1.0;1.0 FUNCTIONAL_SNP rs16941038 chr17 43761565 Intron 6 42422 CEU:1.0;0.94 FUNCTIONAL_SNP rs1724400 chr17 43755871 Intron 6 36728 CEU:1.0;0.942 FUNCTIONAL_SNP rs1724401 chr17 43755857 Intron 6 36714 CEU:1.0;0.932 FUNCTIONAL_SNP rs17649138 chr17 43808067 Intron 6 88924 CEU:1.0;1.0 FUNCTIONAL_SNP rs17426174 chr17 43830938 Intron 6 111795 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762165 chr17 43778602 Intron 6 59459 CEU:1.0;1.0 FUNCTIONAL_SNP rs17688056 chr17 43763241 Intron 6 44098 CEU:1.0;1.0 FUNCTIONAL_SNP rs17760733 chr17 43746276 Intron 6 27133 CEU:1.0;1.0 FUNCTIONAL_SNP rs17687849 chr17 43759719 Intron 6 40576 CEU:1.0;1.0 LEAD_SNP rs9303521 chr17 43805194 Intron 6 ASSOCIATION 19801982 Bone mineral density (hip) 5.39794000867 C17orf69 - CRHR1 ASSOCIATION 19801982 Bone mineral density (spine) 8.0 C17orf69 - CRHR1 LEAD_SNP rs12185268 chr17 43923683 Coding 5b ASSOCIATION 21738487 Parkinson's disease 13.5228787453 IMP5 LEAD_SNP rs242557 chr17 44019712 Intron 5b ASSOCIATION 21685912 Progressive supranuclear palsy 17.0457574906 MAPT FUNCTIONAL_SNP rs242562 chr17 44026739 Intron 4 7027 CEU:1.0;1.0 LEAD_SNP rs8070723 chr17 44081064 Intron 6 ASSOCIATION 21685912 Progressive supranuclear palsy 117.698970004 MAPT ASSOCIATION 21044948 Parkinson's disease 11.15490196 MAPT FUNCTIONAL_SNP rs11079725 chr17 43923934 Coding 5b 157130 CEU:1.0;1.0 FUNCTIONAL_SNP rs17652121 chr17 44073973 Coding 5b 7091 CEU:1.0;1.0 FUNCTIONAL_SNP rs10445337 chr17 44067400 Coding 5b 13664 CEU:1.0;1.0 FUNCTIONAL_SNP rs17574604 chr17 44111613 Coding 6 30549 CEU:1.0;1.0 FUNCTIONAL_SNP rs17662889 chr17 44249096 Coding 6 168032 CEU:1.0;1.0 FUNCTIONAL_SNP rs1881193 chr17 44248769 Coding 6 167705 CEU:1.0;1.0 FUNCTIONAL_SNP rs1881194 chr17 44248814 Coding 6 167750 CEU:1.0;1.0 FUNCTIONAL_SNP rs12373123 chr17 43924073 Coding 5b 156991 CEU:1.0;1.0 FUNCTIONAL_SNP rs12373124 chr17 43924219 Coding 5b 156845 CEU:1.0;0.874 FUNCTIONAL_SNP rs12373139 chr17 43924130 Coding 5b 156934 CEU:1.0;1.0 FUNCTIONAL_SNP rs12373142 chr17 43924200 Coding 5b 156864 CEU:1.0;1.0 FUNCTIONAL_SNP rs16940665 chr17 43907896 Coding 5b 173168 CEU:1.0;1.0 FUNCTIONAL_SNP rs16940674 chr17 43910507 Coding 5b 170557 CEU:1.0;1.0 FUNCTIONAL_SNP rs12185233 chr17 43923654 Coding 5b 157410 CEU:1.0;1.0 FUNCTIONAL_SNP rs12185235 chr17 43923703 Coding 5b 157361 CEU:1.0;1.0 FUNCTIONAL_SNP rs12185268 chr17 43923683 Coding 5b 157381 CEU:1.0;1.0 FUNCTIONAL_SNP rs17585974 chr17 44249199 Coding 6 168135 CEU:1.0;1.0 FUNCTIONAL_SNP rs17651549 chr17 44061278 Coding 5b 19786 CEU:1.0;1.0 FUNCTIONAL_SNP rs1052551 chr17 44068924 Coding 6 12140 CEU:1.0;1.0 FUNCTIONAL_SNP rs1052553 chr17 44073889 Coding 5b 7175 CEU:1.0;1.0 FUNCTIONAL_SNP rs17574040 chr17 44102865 Exon,non-coding 5b 21801 CEU:1.0;1.0 FUNCTIONAL_SNP rs878886 chr17 43912490 Exon,non-coding 4 168574 CEU:1.0;1.0 FUNCTIONAL_SNP rs878887 chr17 43912582 Exon,non-coding 4 168482 CEU:1.0;0.883 FUNCTIONAL_SNP rs17574228 chr17 44104509 Exon,non-coding 5b 23445 CEU:1.0;1.0 FUNCTIONAL_SNP rs17574361 chr17 44108202 Exon,non-coding 6 27138 CEU:1.0;1.0 FUNCTIONAL_SNP rs1048343 chr17 44273889 Exon,non-coding 5b 192825 CEU:1.0;1.0 FUNCTIONAL_SNP rs7350928 chr17 44108100 Exon,non-coding 6 27036 CEU:1.0;1.0 FUNCTIONAL_SNP rs4640231 chr17 43912786 Exon,non-coding 5b 168278 CEU:0.94;0.883 FUNCTIONAL_SNP rs17652748 chr17 44103616 Exon,non-coding 5b 22552 CEU:1.0;1.0 FUNCTIONAL_SNP rs12373168 chr17 43924337 Exon,non-coding 5b 156727 CEU:1.0;1.0 FUNCTIONAL_SNP rs17652961 chr17 44108355 Exon,non-coding 5b 27291 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650901 chr17 44039691 Exon,non-coding 5b 41373 CEU:1.0;1.0 FUNCTIONAL_SNP rs9468 chr17 44101563 Exon,non-coding 5b 20499 CEU:1.0;1.0 FUNCTIONAL_SNP rs7687 chr17 44103296 Exon,non-coding 4 22232 CEU:1.0;1.0 FUNCTIONAL_SNP rs2158257 chr17 44104343 Exon,non-coding 5b 23279 CEU:1.0;0.921 FUNCTIONAL_SNP rs16940799 chr17 44102933 Exon,non-coding 5b 21869 CEU:1.0;1.0 FUNCTIONAL_SNP rs1048333 chr17 44273919 Exon,non-coding 5b 192855 CEU:1.0;1.0 FUNCTIONAL_SNP rs1052587 chr17 44102604 Exon,non-coding 5b 21540 CEU:1.0;1.0 FUNCTIONAL_SNP rs1052594 chr17 44102689 Exon,non-coding 5b 21625 CEU:1.0;1.0 FUNCTIONAL_SNP rs17572495 chr17 44054596 Intron 2a 26468 CEU:1.0;1.0 FUNCTIONAL_SNP rs2732647 chr17 44254413 Intron 2b 173349 CEU:1.0;1.0 FUNCTIONAL_SNP rs17653211 chr17 44112638 Intron 2b 31574 CEU:1.0;1.0 FUNCTIONAL_SNP rs242559 chr17 44025888 Intron 2b 55176 CEU:1.0;0.943 FUNCTIONAL_SNP rs17577052 chr17 44186301 Intron 2b 105237 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532234 chr17 44272266 Intron 2b 191202 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696571 chr17 44237372 Intron 2b 156308 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696592 chr17 44221476 Intron 2b 140412 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696605 chr17 44213921 Intron 2b 132857 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696657 chr17 44244926 Intron 2b 163862 CEU:1.0;1.0 FUNCTIONAL_SNP rs9303525 chr17 44187257 Intron 2b 106193 CEU:1.0;0.935 FUNCTIONAL_SNP rs12150515 chr17 44090685 Intron 2b 9621 CEU:1.0;0.91 FUNCTIONAL_SNP rs2316954 chr17 44156167 Intron 2b 75103 CEU:1.0;1.0 FUNCTIONAL_SNP rs919464 chr17 44065901 Intron 2b 15163 CEU:1.0;1.0 FUNCTIONAL_SNP rs1918793 chr17 44228169 Intron 2c 147105 CEU:1.0;0.938 FUNCTIONAL_SNP rs41384744 chr17 44137070 Intron 3a 56006 CEU:1.0;1.0 FUNCTIONAL_SNP rs17564780 chr17 44005413 Intron 3a 75651 CEU:1.0;1.0 FUNCTIONAL_SNP rs1122380 chr17 44206079 Intron 4 125015 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649866 chr17 44000914 Intron 4 80150 CEU:1.0;1.0 FUNCTIONAL_SNP rs876944 chr17 44134391 Intron 4 53327 CEU:1.0;1.0 FUNCTIONAL_SNP rs1984937 chr17 43980530 Intron 4 100534 CEU:1.0;1.0 FUNCTIONAL_SNP rs2732585 chr17 44259539 Intron 4 178475 CEU:1.0;1.0 FUNCTIONAL_SNP rs2732596 chr17 44269546 Intron 4 188482 CEU:1.0;1.0 FUNCTIONAL_SNP rs17572467 chr17 44054388 Intron 4 26676 CEU:1.0;1.0 FUNCTIONAL_SNP rs2732660 chr17 44272679 Intron 4 191615 CEU:1.0;1.0 FUNCTIONAL_SNP rs2316951 chr17 44139083 Intron 4 58019 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762769 chr17 43893403 Intron 4 187661 CEU:1.0;1.0 FUNCTIONAL_SNP rs733966 chr17 44089563 Intron 4 8499 CEU:1.0;1.0 FUNCTIONAL_SNP rs17663792 chr17 44272552 Intron 4 191488 CEU:1.0;1.0 FUNCTIONAL_SNP rs17564493 chr17 44001379 Intron 4 79685 CEU:1.0;1.0 FUNCTIONAL_SNP rs17576842 chr17 44179992 Intron 4 98928 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532253 chr17 44256296 Intron 4 175232 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532282 chr17 44244896 Intron 4 163832 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532305 chr17 44223060 Intron 4 141996 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532314 chr17 44217112 Intron 4 136048 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532315 chr17 44213934 Intron 4 132870 CEU:1.0;1.0 FUNCTIONAL_SNP rs17653255 chr17 44112743 Intron 4 31679 CEU:1.0;1.0 FUNCTIONAL_SNP rs17577024 chr17 44186252 Intron 4 105188 CEU:1.0;1.0 FUNCTIONAL_SNP rs2141299 chr17 44240986 Intron 4 159922 CEU:1.0;1.0 FUNCTIONAL_SNP rs9915547 chr17 44212782 Intron 4 131718 CEU:1.0;0.94 FUNCTIONAL_SNP rs12150012 chr17 44259519 Intron 4 178455 CEU:1.0;1.0 FUNCTIONAL_SNP rs1918797 chr17 44223243 Intron 4 142179 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696574 chr17 44230097 Intron 4 149033 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150170 chr17 44090646 Intron 4 9582 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532257 chr17 44254494 Intron 4 173430 CEU:1.0;1.0 FUNCTIONAL_SNP rs2732646 chr17 44254379 Intron 4 173315 CEU:1.0;1.0 FUNCTIONAL_SNP rs12185243 chr17 44115351 Intron 4 34287 CEU:1.0;0.936 FUNCTIONAL_SNP rs1529534 chr17 44063140 Intron 4 17924 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150506 chr17 44090536 Intron 4 9472 CEU:1.0;1.0 FUNCTIONAL_SNP rs1560310 chr17 43978534 Intron 4 102530 CEU:1.0;1.0 FUNCTIONAL_SNP rs17571781 chr17 44033802 Intron 4 47262 CEU:1.0;1.0 FUNCTIONAL_SNP rs8077487 chr17 44115440 Intron 5a 34376 CEU:1.0;0.943 FUNCTIONAL_SNP rs17563965 chr17 43990919 Intron 5a 90145 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696602 chr17 44215896 Intron 5a 134832 CEU:1.0;1.0 FUNCTIONAL_SNP rs10514903 chr17 44206646 Intron 5a 125582 CEU:1.0;1.0 FUNCTIONAL_SNP rs10445368 chr17 43933171 Intergenic 5a 147893 CEU:1.0;0.938 FUNCTIONAL_SNP rs2732645 chr17 44254291 Intron 5a 173227 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532235 chr17 44272000 Intron 5a 190936 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532271 chr17 44248042 Intron 5a 166978 CEU:1.0;1.0 FUNCTIONAL_SNP rs41399444 chr17 44121469 Intron 5a 40405 CEU:1.0;1.0 FUNCTIONAL_SNP rs4441322 chr17 43955030 Intergenic 5a 126034 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696590 chr17 44221602 Intron 5a 140538 CEU:1.0;0.911 FUNCTIONAL_SNP rs2696604 chr17 44214094 Intron 5a 133030 CEU:1.0;1.0 FUNCTIONAL_SNP rs17575507 chr17 44134095 Intron 5a 53031 CEU:1.0;1.0 FUNCTIONAL_SNP rs17651285 chr17 44054237 Intron 5a 26827 CEU:1.0;1.0 FUNCTIONAL_SNP rs1918799 chr17 44218242 Intron 5a 137178 CEU:1.0;1.0 FUNCTIONAL_SNP rs17659881 chr17 44157597 Intron 5a 76533 CEU:1.0;1.0 FUNCTIONAL_SNP rs17571739 chr17 44032915 Intron 5a 48149 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649700 chr17 43997901 Intron 5b 83163 CEU:1.0;1.0 FUNCTIONAL_SNP rs17690661 chr17 43924521 Intergenic 5b 156543 CEU:1.0;1.0 FUNCTIONAL_SNP rs17651754 chr17 44067546 Intron 5b 13518 CEU:1.0;1.0 FUNCTIONAL_SNP rs17690679 chr17 43924803 Intergenic 5b 156261 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689471 chr17 43892973 Intron 5b 188091 CEU:1.0;1.0 FUNCTIONAL_SNP rs17577313 chr17 44191835 Intron 5b 110771 CEU:1.0;1.0 FUNCTIONAL_SNP rs1396862 chr17 43902997 Intron 5b 178067 CEU:1.0;1.0 FUNCTIONAL_SNP rs17662115 chr17 44227531 Intron 5b 146467 CEU:1.0;1.0 FUNCTIONAL_SNP rs34097347 chr17 43949448 Intergenic 5b 131616 CEU:1.0;1.0 FUNCTIONAL_SNP rs17663351 chr17 44263923 Intron 5b 182859 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660132 chr17 44165803 Intron 5b 84739 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649918 chr17 44001621 Intron 5b 79443 CEU:1.0;1.0 FUNCTIONAL_SNP rs17654016 chr17 44137925 Intron 5b 56861 CEU:1.0;0.935 FUNCTIONAL_SNP rs1528074 chr17 44234060 Intron 5b 152996 CEU:1.0;1.0 FUNCTIONAL_SNP rs1528075 chr17 44220454 Intron 5b 139390 CEU:1.0;1.0 FUNCTIONAL_SNP rs17662235 chr17 44233776 Intron 5b 152712 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649954 chr17 44001661 Intron 5b 79403 CEU:1.0;1.0 FUNCTIONAL_SNP rs17572147 chr17 44044985 Intron 5b 36079 CEU:1.0;1.0 FUNCTIONAL_SNP rs17652036 chr17 44073027 Intron 5b 8037 CEU:1.0;0.938 FUNCTIONAL_SNP rs17564020 chr17 43991781 Intron 5b 89283 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660294 chr17 44167101 Intron 5b 86037 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696601 chr17 44216158 Intron 5b 135094 CEU:1.0;1.0 FUNCTIONAL_SNP rs17662403 chr17 44238938 Intron 5b 157874 CEU:1.0;1.0 FUNCTIONAL_SNP rs10514897 chr17 44117397 Intron 5b 36333 CEU:1.0;1.0 FUNCTIONAL_SNP rs4383188 chr17 44197603 Intron 5b 116539 CEU:1.0;1.0 FUNCTIONAL_SNP rs10514901 chr17 44194735 Intron 5b 113671 CEU:1.0;1.0 FUNCTIONAL_SNP rs10514904 chr17 44207887 Intron 5b 126823 CEU:1.0;1.0 FUNCTIONAL_SNP rs17769552 chr17 43927290 Intergenic 5b 153774 CEU:0.94;0.883 FUNCTIONAL_SNP rs17650771 chr17 44035367 Intron 5b 45697 CEU:1.0;0.941 FUNCTIONAL_SNP rs17572361 chr17 44052009 Intron 5b 29055 CEU:1.0;1.0 FUNCTIONAL_SNP rs10445338 chr17 44067682 Intron 5b 13382 CEU:1.0;1.0 FUNCTIONAL_SNP rs17572613 chr17 44058004 Intron 5b 23060 CEU:1.0;1.0 FUNCTIONAL_SNP rs41374248 chr17 44120442 Intron 5b 39378 CEU:1.0;1.0 FUNCTIONAL_SNP rs2732589 chr17 44266022 Intron 5b 184958 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660464 chr17 44177993 Intron 5b 96929 CEU:1.0;1.0 FUNCTIONAL_SNP rs10445371 chr17 44065410 Intron 5b 15654 CEU:1.0;1.0 FUNCTIONAL_SNP rs17564223 chr17 43997520 Intron 5b 83544 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660488 chr17 44178337 Intron 5b 97273 CEU:1.0;1.0 FUNCTIONAL_SNP rs17763086 chr17 43905481 Intron 5b 175583 CEU:1.0;1.0 FUNCTIONAL_SNP rs1358438 chr17 44279760 Intergenic 5b 198696 CEU:1.0;1.0 FUNCTIONAL_SNP rs17762954 chr17 43899786 Intron 5b 181278 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660595 chr17 44180954 Intron 5b 99890 CEU:1.0;1.0 FUNCTIONAL_SNP rs17576631 chr17 44170018 Intron 5b 88954 CEU:1.0;1.0 FUNCTIONAL_SNP rs758523 chr17 44258422 Intron 5b 177358 CEU:1.0;1.0 FUNCTIONAL_SNP rs17572627 chr17 44058629 Intron 5b 22435 CEU:1.0;1.0 FUNCTIONAL_SNP rs17576779 chr17 44178272 Intron 5b 97208 CEU:1.0;1.0 FUNCTIONAL_SNP rs754512 chr17 44055647 Intron 5b 25417 CEU:1.0;1.0 FUNCTIONAL_SNP rs1876829 chr17 43911443 Intron 5b 169621 CEU:1.0;1.0 FUNCTIONAL_SNP rs1876831 chr17 43907745 Intron 5b 173319 CEU:1.0;1.0 FUNCTIONAL_SNP rs17585012 chr17 44227510 Intron 5b 146446 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532229 chr17 44277265 Intergenic 5b 196201 CEU:1.0;1.0 FUNCTIONAL_SNP rs885639 chr17 43928614 Intergenic 5b 152450 CEU:1.0;1.0 FUNCTIONAL_SNP rs17574796 chr17 44115074 Intron 5b 34010 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532259 chr17 44253364 Intron 5b 172300 CEU:1.0;1.0 FUNCTIONAL_SNP rs17576870 chr17 44180442 Intron 5b 99378 CEU:1.0;1.0 FUNCTIONAL_SNP rs17574824 chr17 44115107 Intron 5b 34043 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532268 chr17 44250473 Intron 5b 169409 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532269 chr17 44250108 Intron 5b 169044 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532276 chr17 44246624 Intron 5b 165560 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532277 chr17 44246527 Intron 5b 165463 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532280 chr17 44245359 Intron 5b 164295 CEU:1.0;1.0 FUNCTIONAL_SNP rs17572795 chr17 44063393 Intron 5b 17671 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532286 chr17 44241664 Intron 5b 160600 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532296 chr17 44231827 Intron 5b 150763 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532297 chr17 44231326 Intron 5b 150262 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532298 chr17 44231295 Intron 5b 150231 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532302 chr17 44229415 Intron 5b 148351 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532303 chr17 44229364 Intron 5b 148300 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532307 chr17 44221350 Intron 5b 140286 CEU:1.0;1.0 FUNCTIONAL_SNP rs17572823 chr17 44063563 Intron 5b 17501 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532316 chr17 44213712 Intron 5b 132648 CEU:1.0;1.0 FUNCTIONAL_SNP rs17572851 chr17 44063766 Intron 5b 17298 CEU:1.0;1.0 FUNCTIONAL_SNP rs1078268 chr17 44075901 Intron 5b 5163 CEU:1.0;1.0 FUNCTIONAL_SNP rs1078269 chr17 44075837 Intron 5b 5227 CEU:1.0;1.0 FUNCTIONAL_SNP rs17769490 chr17 43925605 Intergenic 5b 155459 CEU:1.0;1.0 FUNCTIONAL_SNP rs17572893 chr17 44064208 Intron 5b 16856 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689653 chr17 43898963 Intron 5b 182101 CEU:1.0;1.0 FUNCTIONAL_SNP rs17585214 chr17 44233811 Intron 5b 152747 CEU:1.0;1.0 FUNCTIONAL_SNP rs1117253 chr17 44149297 Intron 5b 68233 CEU:1.0;1.0 FUNCTIONAL_SNP rs767056 chr17 43998910 Intron 5b 82154 CEU:1.0;1.0 FUNCTIONAL_SNP rs767057 chr17 43998822 Intron 5b 82242 CEU:1.0;1.0 FUNCTIONAL_SNP rs767058 chr17 43998767 Intron 5b 82297 CEU:1.0;1.0 FUNCTIONAL_SNP rs767059 chr17 43999100 Intron 5b 81964 CEU:1.0;1.0 FUNCTIONAL_SNP rs17661027 chr17 44193097 Intron 5b 112033 CEU:1.0;1.0 FUNCTIONAL_SNP rs1406068 chr17 44234526 Intron 5b 153462 CEU:1.0;1.0 FUNCTIONAL_SNP rs1406069 chr17 44225886 Intron 5b 144822 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650818 chr17 44036787 Intron 5b 44277 CEU:1.0;1.0 FUNCTIONAL_SNP rs17577094 chr17 44187492 Intron 5b 106428 CEU:1.0;1.0 FUNCTIONAL_SNP rs4277389 chr17 43895653 Intron 5b 185411 CEU:1.0;1.0 FUNCTIONAL_SNP rs4566211 chr17 43895696 Intron 5b 185368 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689824 chr17 43904397 Intron 5b 176667 CEU:1.0;1.0 FUNCTIONAL_SNP rs17661141 chr17 44196015 Intron 5b 114951 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696438 chr17 44272928 Intron 5b 191864 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696443 chr17 44276821 Intergenic 5b 195757 CEU:1.0;1.0 FUNCTIONAL_SNP rs8072451 chr17 43893716 Intron 5b 187348 CEU:1.0;1.0 FUNCTIONAL_SNP rs17576989 chr17 44183616 Intron 5b 102552 CEU:1.0;1.0 FUNCTIONAL_SNP rs17585426 chr17 44238966 Intron 5b 157902 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689882 chr17 43906828 Intron 5b 174236 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650973 chr17 44044220 Intron 5b 36844 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650991 chr17 44044508 Intron 5b 36556 CEU:1.0;1.0 FUNCTIONAL_SNP rs17763634 chr17 43921754 Intergenic 5b 159310 CEU:1.0;1.0 FUNCTIONAL_SNP rs17573175 chr17 44071089 Intron 5b 9975 CEU:1.0;1.0 FUNCTIONAL_SNP rs10445364 chr17 43916356 Intergenic 5b 164708 CEU:1.0;1.0 FUNCTIONAL_SNP rs17689918 chr17 43910088 Intron 5b 170976 CEU:1.0;1.0 FUNCTIONAL_SNP rs1912151 chr17 43902944 Intron 5b 178120 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150104 chr17 44015929 Intron 5b 65135 CEU:1.0;1.0 FUNCTIONAL_SNP rs740706 chr17 44258354 Intron 5b 177290 CEU:1.0;1.0 FUNCTIONAL_SNP rs740708 chr17 44256655 Intron 5b 175591 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696567 chr17 44241304 Intron 5b 160240 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696572 chr17 44231617 Intron 5b 150553 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696587 chr17 44222460 Intron 5b 141396 CEU:1.0;1.0 FUNCTIONAL_SNP rs17651093 chr17 44049550 Intron 5b 31514 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696600 chr17 44216226 Intron 5b 135162 CEU:1.0;1.0 FUNCTIONAL_SNP rs17661348 chr17 44207066 Intron 5b 126002 CEU:1.0;1.0 FUNCTIONAL_SNP rs2217394 chr17 44053448 Intron 5b 27616 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150195 chr17 44014263 Intron 5b 66801 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660398 chr17 44170612 Intron 5b 89548 CEU:1.0;1.0 FUNCTIONAL_SNP rs17651134 chr17 44050340 Intron 5b 30724 CEU:1.0;1.0 FUNCTIONAL_SNP rs17653193 chr17 44112441 Intron 5b 31377 CEU:1.0;0.936 FUNCTIONAL_SNP rs740705 chr17 44258446 Intron 5b 177382 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150242 chr17 44015816 Intron 5b 65248 CEU:1.0;1.0 FUNCTIONAL_SNP rs17661428 chr17 44208144 Intron 5b 127080 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696700 chr17 44259792 Intron 5b 178728 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696701 chr17 44259919 Intron 5b 178855 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696702 chr17 44260416 Intron 5b 179352 CEU:1.0;1.0 FUNCTIONAL_SNP rs17575423 chr17 44129253 Intron 5b 48189 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696706 chr17 44264045 Intron 5b 182981 CEU:1.0;1.0 FUNCTIONAL_SNP rs1981997 chr17 44056767 Intron 5b 24297 CEU:1.0;1.0 FUNCTIONAL_SNP rs1981998 chr17 44056833 Intron 5b 24231 CEU:1.0;1.0 FUNCTIONAL_SNP rs17763596 chr17 43921210 Intergenic 5b 159854 CEU:1.0;1.0 FUNCTIONAL_SNP rs1358437 chr17 44279803 Intergenic 5b 198739 CEU:1.0;1.0 FUNCTIONAL_SNP rs4597358 chr17 44110670 Intron 5b 29606 CEU:1.0;0.943 FUNCTIONAL_SNP rs2055794 chr17 43951717 Intergenic 5b 129347 CEU:1.0;0.844 FUNCTIONAL_SNP rs17575556 chr17 44135827 Intron 5b 54763 CEU:1.0;1.0 FUNCTIONAL_SNP rs16940677 chr17 43911898 Intron 5b 169166 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150460 chr17 44014137 Intron 5b 66927 CEU:1.0;1.0 FUNCTIONAL_SNP rs1529535 chr17 44064759 Intron 5b 16305 CEU:1.0;1.0 FUNCTIONAL_SNP rs17690314 chr17 43919884 Intergenic 5b 161180 CEU:1.0;1.0 FUNCTIONAL_SNP rs17690326 chr17 43920974 Intergenic 5b 160090 CEU:1.0;1.0 FUNCTIONAL_SNP rs1816 chr17 44276618 Intergenic 5b 195554 CEU:1.0;1.0 FUNCTIONAL_SNP rs17651483 chr17 44058861 Intron 5b 22203 CEU:1.0;1.0 FUNCTIONAL_SNP rs17691610 chr17 43970662 Intergenic 5b 110402 CEU:1.0;1.0 FUNCTIONAL_SNP rs1918788 chr17 44267617 Intron 5b 186553 CEU:1.0;1.0 FUNCTIONAL_SNP rs17573858 chr17 44090796 Intron 5b 9732 CEU:1.0;1.0 FUNCTIONAL_SNP rs1107820 chr17 44135359 Intron 5b 54295 CEU:1.0;1.0 FUNCTIONAL_SNP rs17652502 chr17 44094471 Intron 5b 13407 CEU:1.0;1.0 FUNCTIONAL_SNP rs17571718 chr17 44032768 Intron 5b 48296 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649553 chr17 43994648 Intron 5b 86416 CEU:1.0;1.0 FUNCTIONAL_SNP rs17577877 chr17 44208218 Intron 5b 127154 CEU:1.0;1.0 FUNCTIONAL_SNP rs919461 chr17 44065669 Intron 5b 15395 CEU:0.909;0.826 FUNCTIONAL_SNP rs17571809 chr17 44034859 Intron 5b 46205 CEU:1.0;1.0 FUNCTIONAL_SNP rs17651700 chr17 44066634 Intron 5b 14430 CEU:1.0;1.0 FUNCTIONAL_SNP rs17571857 chr17 44035706 Intron 6 45358 CEU:1.0;1.0 FUNCTIONAL_SNP rs17664048 chr17 44278742 Intergenic 6 197678 CEU:1.0;1.0 FUNCTIONAL_SNP rs11079729 chr17 44115569 Intron 6 34505 CEU:1.0;1.0 FUNCTIONAL_SNP rs4630591 chr17 44192568 Intron 6 111504 CEU:1.0;0.941 FUNCTIONAL_SNP rs2696662 chr17 44249621 Intron 6 168557 CEU:1.0;1.0 FUNCTIONAL_SNP rs1122381 chr17 44205839 Intron 6 124775 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660017 chr17 44160674 Intron 6 79610 CEU:1.0;0.941 FUNCTIONAL_SNP rs17653889 chr17 44133070 Intron 6 52006 CEU:1.0;1.0 FUNCTIONAL_SNP rs8079501 chr17 44000234 Intron 6 80830 CEU:1.0;1.0 FUNCTIONAL_SNP rs7221390 chr17 44116950 Intron 6 35886 CEU:1.0;0.943 FUNCTIONAL_SNP rs17653906 chr17 44133142 Intron 6 52078 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660065 chr17 44162284 Intron 6 81220 CEU:1.0;1.0 FUNCTIONAL_SNP rs17770186 chr17 43964191 Intergenic 6 116873 CEU:1.0;1.0 FUNCTIONAL_SNP rs17653998 chr17 44135985 Intron 6 54921 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660167 chr17 44166311 Intron 6 85247 CEU:1.0;1.0 FUNCTIONAL_SNP rs1528072 chr17 44236725 Intron 6 155661 CEU:1.0;1.0 FUNCTIONAL_SNP rs4548919 chr17 44192395 Intron 6 111331 CEU:1.0;1.0 FUNCTIONAL_SNP rs17572169 chr17 44045974 Intron 6 35090 CEU:1.0;1.0 FUNCTIONAL_SNP rs17563986 chr17 43991272 Intron 6 89792 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660251 chr17 44166646 Intron 6 85582 CEU:1.0;1.0 FUNCTIONAL_SNP rs1800547 chr17 44051846 Intron 6 29218 CEU:1.0;1.0 FUNCTIONAL_SNP rs4608377 chr17 44113359 Intron 6 32295 CEU:1.0;0.94 FUNCTIONAL_SNP rs3912061 chr17 44165098 Intron 6 84034 CEU:1.0;1.0 FUNCTIONAL_SNP rs17661385 chr17 44207778 Intron 6 126714 CEU:1.0;1.0 FUNCTIONAL_SNP rs17659953 chr17 44159725 Intron 6 78661 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650063 chr17 44002555 Intron 6 78509 CEU:1.0;1.0 FUNCTIONAL_SNP rs17572248 chr17 44049867 Intron 6 31197 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660337 chr17 44169605 Intron 6 88541 CEU:1.0;1.0 FUNCTIONAL_SNP rs8080583 chr17 44162597 Intron 6 81533 CEU:1.0;0.942 FUNCTIONAL_SNP rs17653836 chr17 44128876 Intron 6 47812 CEU:1.0;1.0 FUNCTIONAL_SNP rs10514898 chr17 44119636 Intron 6 38572 CEU:1.0;1.0 FUNCTIONAL_SNP rs2066899 chr17 44155732 Intron 6 74668 CEU:1.0;0.943 FUNCTIONAL_SNP rs2316782 chr17 44010040 Intron 6 71024 CEU:1.0;1.0 FUNCTIONAL_SNP rs2316783 chr17 44010118 Intron 6 70946 CEU:1.0;1.0 FUNCTIONAL_SNP rs2316784 chr17 44021699 Intron 6 59365 CEU:1.0;1.0 FUNCTIONAL_SNP rs1534456 chr17 44232990 Intron 6 151926 CEU:1.0;1.0 FUNCTIONAL_SNP rs17564153 chr17 43995098 Intron 6 85966 CEU:1.0;1.0 FUNCTIONAL_SNP rs4792843 chr17 44243179 Intron 6 162115 CEU:1.0;1.0 FUNCTIONAL_SNP rs10445335 chr17 43934896 Intergenic 6 146168 CEU:1.0;1.0 FUNCTIONAL_SNP rs10445370 chr17 43935118 Intergenic 6 145946 CEU:1.0;1.0 FUNCTIONAL_SNP rs2732643 chr17 44251907 Intron 6 170843 CEU:1.0;1.0 FUNCTIONAL_SNP rs17652337 chr17 44083323 Intron 6 2259 CEU:1.0;0.94 FUNCTIONAL_SNP rs2732665 chr17 44277691 Intergenic 6 196627 CEU:1.0;1.0 FUNCTIONAL_SNP rs2732674 chr17 44280697 Intergenic 6 199633 CEU:1.0;1.0 FUNCTIONAL_SNP rs2732675 chr17 44280188 Intergenic 6 199124 CEU:1.0;1.0 FUNCTIONAL_SNP rs1864325 chr17 43977827 Intron 6 103237 CEU:1.0;1.0 FUNCTIONAL_SNP rs2222746 chr17 44222019 Intron 6 140955 CEU:1.0;1.0 FUNCTIONAL_SNP rs7207582 chr17 44210933 Intron 6 129869 CEU:1.0;0.94 FUNCTIONAL_SNP rs17650335 chr17 44012343 Intron 6 68721 CEU:1.0;1.0 FUNCTIONAL_SNP rs17661045 chr17 44194152 Intron 6 113088 CEU:1.0;1.0 FUNCTIONAL_SNP rs17691328 chr17 43955487 Intergenic 6 125577 CEU:1.0;1.0 FUNCTIONAL_SNP rs7350980 chr17 44110271 Intron 6 29207 CEU:1.0;0.943 FUNCTIONAL_SNP rs17650381 chr17 44013024 Intron 6 68040 CEU:1.0;0.941 FUNCTIONAL_SNP rs17652449 chr17 44088937 Intron 6 7873 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650417 chr17 44013103 Intron 6 67961 CEU:1.0;1.0 FUNCTIONAL_SNP rs17576695 chr17 44172327 Intron 6 91263 CEU:1.0;1.0 FUNCTIONAL_SNP rs974293 chr17 44150233 Intron 6 69169 CEU:1.0;1.0 FUNCTIONAL_SNP rs17576709 chr17 44173356 Intron 6 92292 CEU:1.0;1.0 FUNCTIONAL_SNP rs2838 chr17 44141347 Intron 6 60283 CEU:1.0;1.0 FUNCTIONAL_SNP rs17691449 chr17 43964283 Intergenic 6 116781 CEU:1.0;1.0 FUNCTIONAL_SNP rs17691466 chr17 43968219 Intergenic 6 112845 CEU:1.0;1.0 FUNCTIONAL_SNP rs2077551 chr17 44214888 Intron 6 133824 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532228 chr17 44277818 Intergenic 6 196754 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696684 chr17 44244397 Intron 6 163333 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650579 chr17 44030115 Intron 6 50949 CEU:1.0;1.0 FUNCTIONAL_SNP rs2019822 chr17 43959918 Intergenic 6 121146 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532246 chr17 44262418 Intron 6 181354 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532255 chr17 44255532 Intron 6 174468 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532256 chr17 44255017 Intron 6 173953 CEU:1.0;1.0 FUNCTIONAL_SNP rs17691556 chr17 43969168 Intergenic 6 111896 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650597 chr17 44030195 Intron 6 50869 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532267 chr17 44250616 Intron 6 169552 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532270 chr17 44249800 Intron 6 168736 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532273 chr17 44247314 Intron 6 166250 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532274 chr17 44247164 Intron 6 166100 CEU:1.0;0.943 FUNCTIONAL_SNP rs2532275 chr17 44246997 Intron 6 165933 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532278 chr17 44246405 Intron 6 165341 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532281 chr17 44245171 Intron 6 164107 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532288 chr17 44239958 Intron 6 158894 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660865 chr17 44189408 Intron 6 108344 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532290 chr17 44238490 Intron 6 157426 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532291 chr17 44238424 Intron 6 157360 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532292 chr17 44237068 Intron 6 156004 CEU:1.0;1.0 FUNCTIONAL_SNP rs17564619 chr17 44002138 Intron 6 78926 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532313 chr17 44217293 Intron 6 136229 CEU:1.0;1.0 FUNCTIONAL_SNP rs1918801 chr17 44218044 Intron 6 136980 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660907 chr17 44191085 Intron 6 110021 CEU:1.0;1.0 FUNCTIONAL_SNP rs17576954 chr17 44181933 Intron 6 100869 CEU:1.0;1.0 FUNCTIONAL_SNP rs1076222 chr17 44109769 Intron 6 28705 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660936 chr17 44191159 Intron 6 110095 CEU:1.0;1.0 FUNCTIONAL_SNP rs17564703 chr17 44002595 Intron 6 78469 CEU:1.0;1.0 FUNCTIONAL_SNP rs6503457 chr17 44208312 Intron 6 127248 CEU:1.0;0.94 FUNCTIONAL_SNP rs17651213 chr17 44051924 Intron 6 29140 CEU:1.0;1.0 FUNCTIONAL_SNP rs17661015 chr17 44192957 Intron 6 111893 CEU:1.0;1.0 FUNCTIONAL_SNP rs1881195 chr17 44257473 Intron 6 176409 CEU:1.0;1.0 FUNCTIONAL_SNP rs1406074 chr17 44222067 Intron 6 141003 CEU:1.0;1.0 FUNCTIONAL_SNP rs7218319 chr17 44126365 Intron 6 45301 CEU:1.0;0.942 FUNCTIONAL_SNP rs17574425 chr17 44109188 Intron 6 28124 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650842 chr17 44037491 Intron 6 43573 CEU:1.0;1.0 FUNCTIONAL_SNP rs17564871 chr17 44011018 Intron 6 70046 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650860 chr17 44039008 Intron 6 42056 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650872 chr17 44039516 Intron 6 41548 CEU:1.0;1.0 FUNCTIONAL_SNP rs17691508 chr17 43968463 Intergenic 6 112601 CEU:1.0;1.0 FUNCTIONAL_SNP rs17577159 chr17 44188477 Intron 6 107413 CEU:1.0;1.0 FUNCTIONAL_SNP rs17763533 chr17 43918190 Intergenic 6 162874 CEU:1.0;1.0 FUNCTIONAL_SNP rs2158072 chr17 43950195 Intergenic 6 130869 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696440 chr17 44274560 Intergenic 6 193496 CEU:1.0;0.921 FUNCTIONAL_SNP rs2696446 chr17 44278661 Intergenic 6 197597 CEU:1.0;1.0 FUNCTIONAL_SNP rs10491140 chr17 43950976 Intergenic 6 130088 CEU:1.0;1.0 FUNCTIONAL_SNP rs17564948 chr17 44011749 Intron 6 69315 CEU:1.0;1.0 FUNCTIONAL_SNP rs1078830 chr17 43946112 Intergenic 6 134952 CEU:1.0;1.0 FUNCTIONAL_SNP rs1991556 chr17 44083402 Intron 6 2338 CEU:1.0;0.938 FUNCTIONAL_SNP rs12150064 chr17 44128407 Intron 6 47343 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150087 chr17 44210988 Intron 6 129924 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150090 chr17 44115886 Intron 6 34822 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696526 chr17 44267863 Intron 6 186799 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150111 chr17 44013938 Intron 6 67126 CEU:1.0;1.0 FUNCTIONAL_SNP rs17565025 chr17 44012463 Intron 6 68601 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696573 chr17 44230647 Intron 6 149583 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696575 chr17 44228824 Intron 6 147760 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696576 chr17 44228770 Intron 6 147706 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696577 chr17 44227882 Intron 6 146818 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696581 chr17 44227186 Intron 6 146122 CEU:1.0;1.0 FUNCTIONAL_SNP rs17577369 chr17 44192923 Intron 6 111859 CEU:1.0;1.0 FUNCTIONAL_SNP rs2106784 chr17 43949892 Intergenic 6 131172 CEU:1.0;1.0 FUNCTIONAL_SNP rs17653162 chr17 44111827 Intron 6 30763 CEU:1.0;1.0 FUNCTIONAL_SNP rs17585608 chr17 44243979 Intron 6 162915 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696660 chr17 44246211 Intron 6 165147 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150229 chr17 44015446 Intron 6 65618 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150230 chr17 44015464 Intron 6 65600 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696666 chr17 44251972 Intron 6 170908 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150235 chr17 44015745 Intron 6 65319 CEU:1.0;1.0 FUNCTIONAL_SNP rs17577447 chr17 44194381 Intron 6 113317 CEU:1.0;1.0 FUNCTIONAL_SNP rs17585644 chr17 44244581 Intron 6 163517 CEU:1.0;1.0 FUNCTIONAL_SNP rs2532264 chr17 44252416 Intron 6 171352 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696696 chr17 44255777 Intron 6 174713 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696704 chr17 44261753 Intron 6 180689 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696707 chr17 44264717 Intron 6 183653 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696708 chr17 44264943 Intron 6 183879 CEU:1.0;1.0 FUNCTIONAL_SNP rs2696709 chr17 44265477 Intron 6 184413 CEU:1.0;1.0 FUNCTIONAL_SNP rs17575437 chr17 44133031 Intron 6 51967 CEU:1.0;1.0 FUNCTIONAL_SNP rs17577496 chr17 44194835 Intron 6 113771 CEU:1.0;1.0 FUNCTIONAL_SNP rs17660847 chr17 44189373 Intron 6 108309 CEU:1.0;0.867 FUNCTIONAL_SNP rs17651243 chr17 44052284 Intron 6 28780 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150320 chr17 44213204 Intron 6 132140 CEU:1.0;1.0 FUNCTIONAL_SNP rs1467969 chr17 43998328 Intron 6 82736 CEU:1.0;1.0 FUNCTIONAL_SNP rs1467970 chr17 43998574 Intron 6 82490 CEU:1.0;1.0 FUNCTIONAL_SNP rs17770108 chr17 43961292 Intergenic 6 119772 CEU:1.0;1.0 FUNCTIONAL_SNP rs2082068 chr17 43979971 Intron 6 101093 CEU:1.0;1.0 FUNCTIONAL_SNP rs17770120 chr17 43963943 Intergenic 6 117121 CEU:1.0;1.0 FUNCTIONAL_SNP rs2109092 chr17 44232959 Intron 6 151895 CEU:1.0;1.0 FUNCTIONAL_SNP rs17770150 chr17 43964163 Intergenic 6 116901 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150447 chr17 44128125 Intron 6 47061 CEU:1.0;1.0 FUNCTIONAL_SNP rs17577650 chr17 44205500 Intron 6 124436 CEU:1.0;1.0 FUNCTIONAL_SNP rs4327091 chr17 44021717 Intron 6 59347 CEU:1.0;1.0 FUNCTIONAL_SNP rs17650633 chr17 44030231 Intron 6 50833 CEU:1.0;1.0 FUNCTIONAL_SNP rs10221243 chr17 44212310 Intron 6 131246 CEU:1.0;0.943 FUNCTIONAL_SNP rs17573593 chr17 44082603 Intron 6 1539 CEU:1.0;1.0 FUNCTIONAL_SNP rs17573607 chr17 44083081 Intron 6 2017 CEU:1.0;0.903 FUNCTIONAL_SNP rs12150516 chr17 43944519 Intergenic 6 136545 CEU:1.0;1.0 FUNCTIONAL_SNP rs17575683 chr17 44139662 Intron 6 58598 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150542 chr17 44115730 Intron 6 34666 CEU:1.0;1.0 FUNCTIONAL_SNP rs1815 chr17 44276578 Intergenic 6 195514 CEU:1.0;1.0 FUNCTIONAL_SNP rs8070942 chr17 44208674 Intron 6 127610 CEU:1.0;0.943 FUNCTIONAL_SNP rs17650651 chr17 44030311 Intron 6 50753 CEU:1.0;1.0 FUNCTIONAL_SNP rs12150576 chr17 44015624 Intron 6 65440 CEU:1.0;1.0 FUNCTIONAL_SNP rs17770296 chr17 43969136 Intergenic 6 111928 CEU:1.0;1.0 FUNCTIONAL_SNP rs1918789 chr17 44240107 Intron 6 159043 CEU:1.0;1.0 FUNCTIONAL_SNP rs1918790 chr17 44228619 Intron 6 147555 CEU:1.0;1.0 FUNCTIONAL_SNP rs1918791 chr17 44228609 Intron 6 147545 CEU:1.0;1.0 FUNCTIONAL_SNP rs1918792 chr17 44228529 Intron 6 147465 CEU:1.0;1.0 FUNCTIONAL_SNP rs17564983 chr17 44011825 Intron 6 69239 CEU:1.0;1.0 FUNCTIONAL_SNP rs1918798 chr17 44222335 Intron 6 141271 CEU:1.0;1.0 FUNCTIONAL_SNP rs1918800 chr17 44218138 Intron 6 137074 CEU:1.0;1.0 FUNCTIONAL_SNP rs1468241 chr17 44196153 Intron 6 115089 CEU:1.0;1.0 FUNCTIONAL_SNP rs17659731 chr17 44144634 Intron 6 63570 CEU:1.0;1.0 FUNCTIONAL_SNP rs916793 chr17 43954686 Intergenic 6 126378 CEU:1.0;1.0 FUNCTIONAL_SNP rs17770337 chr17 43969779 Intergenic 6 111285 CEU:1.0;1.0 FUNCTIONAL_SNP rs17770343 chr17 43970154 Intergenic 6 110910 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649518 chr17 43994386 Intron 6 86678 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649571 chr17 43994952 Intron 6 86112 CEU:1.0;1.0 FUNCTIONAL_SNP rs956329 chr17 44251230 Intron 6 170166 CEU:1.0;1.0 FUNCTIONAL_SNP rs17575850 chr17 44144387 Intron 6 63323 CEU:1.0;1.0 FUNCTIONAL_SNP rs2873269 chr17 43931122 Intergenic 6 149942 CEU:1.0;1.0 FUNCTIONAL_SNP rs7501759 chr17 44009921 Intron 6 71143 CEU:1.0;1.0 FUNCTIONAL_SNP rs1476554 chr17 44159102 Intron 6 78038 CEU:1.0;1.0 FUNCTIONAL_SNP rs2099151 chr17 43979822 Intron 6 101242 CEU:1.0;1.0 FUNCTIONAL_SNP rs17577954 chr17 44209628 Intron 6 128564 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649641 chr17 43997372 Intron 6 83692 CEU:1.0;1.0 FUNCTIONAL_SNP rs4471723 chr17 44205690 Intron 6 124626 CEU:1.0;1.0 FUNCTIONAL_SNP rs17577975 chr17 44210442 Intron 6 129378 CEU:1.0;1.0 FUNCTIONAL_SNP rs41437445 chr17 44116238 Intron 7 35174 CEU:1.0;1.0 FUNCTIONAL_SNP rs41382552 chr17 44118999 Intron 7 37935 CEU:1.0;1.0 FUNCTIONAL_SNP rs17564829 chr17 44006601 Intron 7 74463 CEU:1.0;1.0 FUNCTIONAL_SNP rs17649635 chr17 43995990 Intron 7 85074 CEU:1.0;1.0 LEAD_SNP rs199533 chr17 44828931 Coding 5b ASSOCIATION 20711177 Parkinson's disease 6.0 NSF ASSOCIATION 19915575 Parkinson's disease 14.0 NSF FUNCTIONAL_SNP rs199536 chr17 44820425 Intron 2a 8506 CEU:1.0;0.89 FUNCTIONAL_SNP rs70602 chr17 44859715 Intron 4 30784 CEU:1.0;0.941 FUNCTIONAL_SNP rs199513 chr17 44856932 Intron 4 28001 CEU:1.0;0.941 FUNCTIONAL_SNP rs199514 chr17 44856881 Intron 4 27950 CEU:1.0;0.941 FUNCTIONAL_SNP rs199524 chr17 44848438 Intron 4 19507 CEU:0.939;0.831 FUNCTIONAL_SNP rs199443 chr17 44819565 Intron 5a 9366 CEU:1.0;1.0 FUNCTIONAL_SNP rs9896243 chr17 44826056 Intron 5a 2875 CEU:1.0;1.0 FUNCTIONAL_SNP rs199442 chr17 44820122 Intron 5b 8809 CEU:1.0;0.89 FUNCTIONAL_SNP rs199451 chr17 44801784 Intron 5b 27147 CEU:1.0;1.0 FUNCTIONAL_SNP rs199454 chr17 44800110 Intron 5b 28821 CEU:1.0;0.89 FUNCTIONAL_SNP rs199456 chr17 44797919 Intron 5b 31012 CEU:1.0;1.0 FUNCTIONAL_SNP rs199498 chr17 44865603 Intron 5b 36672 CEU:1.0;0.883 FUNCTIONAL_SNP rs199504 chr17 44861003 Intron 5b 32072 CEU:1.0;0.911 FUNCTIONAL_SNP rs199505 chr17 44859410 Intron 5b 30479 CEU:1.0;0.938 FUNCTIONAL_SNP rs199506 chr17 44859031 Intron 5b 30100 CEU:1.0;0.941 FUNCTIONAL_SNP rs199507 chr17 44858855 Intron 5b 29924 CEU:1.0;0.936 FUNCTIONAL_SNP rs199515 chr17 44856641 Intron 5b 27710 CEU:1.0;0.941 FUNCTIONAL_SNP rs199516 chr17 44856485 Intron 5b 27554 CEU:1.0;0.941 FUNCTIONAL_SNP rs199520 chr17 44853872 Intron 5b 24941 CEU:0.936;0.824 FUNCTIONAL_SNP rs199528 chr17 44843136 Intron 5b 14205 CEU:1.0;0.941 FUNCTIONAL_SNP rs199530 chr17 44836653 Intergenic 5b 7722 CEU:1.0;0.89 FUNCTIONAL_SNP rs538628 chr17 44787313 Intron 6 41618 CEU:1.0;1.0 FUNCTIONAL_SNP rs199436 chr17 44789285 Intron 6 39646 CEU:1.0;0.89 FUNCTIONAL_SNP rs199438 chr17 44791643 Intron 6 37288 CEU:1.0;0.89 FUNCTIONAL_SNP rs199439 chr17 44793503 Intron 6 35428 CEU:1.0;1.0 FUNCTIONAL_SNP rs199445 chr17 44817408 Intron 6 11523 CEU:1.0;1.0 FUNCTIONAL_SNP rs199448 chr17 44809001 Intron 6 19930 CEU:1.0;1.0 FUNCTIONAL_SNP rs199449 chr17 44808902 Intron 6 20029 CEU:1.0;0.89 FUNCTIONAL_SNP rs199452 chr17 44801340 Intron 6 27591 CEU:1.0;0.89 FUNCTIONAL_SNP rs199455 chr17 44799216 Intron 6 29715 CEU:1.0;0.886 FUNCTIONAL_SNP rs199457 chr17 44795469 Intron 6 33462 CEU:1.0;1.0 FUNCTIONAL_SNP rs183211 chr17 44788310 Intron 6 40621 CEU:1.0;0.89 FUNCTIONAL_SNP rs415430 chr17 44859144 Intron 6 30213 CEU:1.0;0.941 FUNCTIONAL_SNP rs199501 chr17 44862613 Intron 6 33682 CEU:0.939;0.831 FUNCTIONAL_SNP rs199509 chr17 44858728 Intron 6 29797 CEU:1.0;0.941 FUNCTIONAL_SNP rs142167 chr17 44795234 Intron 6 33697 CEU:1.0;0.89 FUNCTIONAL_SNP rs199529 chr17 44837217 Intergenic 6 8286 CEU:1.0;0.89 FUNCTIONAL_SNP rs199534 chr17 44824213 Intron 6 4718 CEU:1.0;1.0 FUNCTIONAL_SNP rs199535 chr17 44822662 Intron 6 6269 CEU:1.0;1.0 FUNCTIONAL_SNP rs169201 chr17 44790203 Intron 6 38728 CEU:1.0;1.0 FUNCTIONAL_SNP rs199444 chr17 44818276 Intron 7 10655 CEU:1.0;0.89 FUNCTIONAL_SNP rs199453 chr17 44800946 Intron 7 27985 CEU:1.0;0.89 FUNCTIONAL_SNP rs9891167 chr17 44687766 Intron 7 141165 CEU:1.0;0.841 LEAD_SNP rs2074404 chr17 44865439 Intron 5b ASSOCIATION 20190752 Celiac disease 6.0 WNT3 FUNCTIONAL_SNP rs916888 chr17 44863133 Intron 4 2306 CEU:0.942;0.887 FUNCTIONAL_SNP rs199498 chr17 44865603 Intron 5b 164 CEU:1.0;0.832, CHB:1.0;0.954, JPT:0.946;0.849 FUNCTIONAL_SNP rs199507 chr17 44858855 Intron 5b 6584 CEU:1.0;0.825 FUNCTIONAL_SNP rs7224296 chr17 44800046 Intron 6 65393 CEU:1.0;0.804 LEAD_SNP rs17608766 chr17 45013271 Exon,non-coding 2b ASSOCIATION 21076409 Ventricular conduction 9.30102999566 GOSR2 FUNCTIONAL_SNP rs11874 chr17 45017193 Exon,non-coding 7 3922 CEU:1.0;0.89 LEAD_SNP rs8070463 chr17 45768836 Intergenic 6 ASSOCIATION 21743469 Ankylosing spondylitis 7.30102999566 KPNB1 - TBKBP1 FUNCTIONAL_SNP rs4793978 chr17 45698175 Intron 2b 70661 CEU:0.92;0.813, CHB:0.795;0.632, JPT:0.945;0.769 FUNCTIONAL_SNP rs3760370 chr17 45695832 Intron 4 73004 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs4439799 chr17 45781599 Intron 4 12763 CEU:1.0;0.924, CHB:0.928;0.547 FUNCTIONAL_SNP rs11871606 chr17 45732774 Intron 5a 36062 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs4239162 chr17 45755810 Intron 5b 13026 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs11079784 chr17 45702280 Intergenic 5b 66556 CEU:0.916;0.84, CHB:0.796;0.633, JPT:0.946;0.776 FUNCTIONAL_SNP rs8075411 chr17 45676760 Intron 6 92076 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs8074149 chr17 45583375 Intergenic 6 185461 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs8065990 chr17 45591166 Intergenic 6 177670 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs8072644 chr17 45653364 Intron 6 115472 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs12943464 chr17 45690351 Intron 6 78485 CEU:0.916;0.84, CHB:0.835;0.662, JPT:0.942;0.758 FUNCTIONAL_SNP rs4289035 chr17 45707211 Intergenic 7 61625 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs4794001 chr17 45720849 Intergenic 7 47987 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs8078880 chr17 45676526 Intron 7 92310 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs9635762 chr17 45648446 Intron 7 120390 CEU:0.911;0.829, CHB:0.796;0.633, JPT:0.942;0.798 FUNCTIONAL_SNP rs4239163 chr17 45755954 Intron 7 12882 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs4794058 chr17 45597098 Intergenic 7 171738 CEU:0.921;0.849, CHB:0.8;0.64, JPT:0.946;0.776 FUNCTIONAL_SNP rs4793842 chr17 45671506 Intron 7 97330 CEU:0.918;0.809, CHB:0.835;0.662, JPT:0.945;0.769 LEAD_SNP rs3764400 chr17 46123932 Intergenic 6 ASSOCIATION 20935630 Body mass index 6.39794000867 NFE2L1 LEAD_SNP rs2084881 chr17 46357120 Intron 7 ASSOCIATION 20852632 Ovarian cancer 5.69897000434 SKAP1 FUNCTIONAL_SNP rs9891073 chr17 46438249 Intron 4 81129 CEU:1.0;0.857, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6504158 chr17 46372290 Intron 4 15170 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7217120 chr17 46484755 Intron 4 127635 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4556829 chr17 46365566 Intron 5a 8446 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9909002 chr17 46426468 Intron 5a 69348 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9905961 chr17 46356364 Intron 5a 756 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7209855 chr17 46388803 Intron 5a 31683 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs7225998 chr17 46353134 Intron 5b 3986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7213513 chr17 46392294 Intron 5b 35174 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12946636 chr17 46472432 Intron 5b 115312 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs7207826 chr17 46500673 Intron 6 143553 CEU:1.0;0.864, CHB:1.0;0.822, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs4451990 chr17 46400653 Intron 6 43533 CEU:1.0;0.825, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9894812 chr17 46389953 Intron 6 32833 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs9895985 chr17 46352463 Intron 6 4657 CEU:1.0;1.0, CHB:1.0;0.915, JPT:1.0;0.842, YRI:1.0;1.0 FUNCTIONAL_SNP rs12944592 chr17 46430405 Intron 6 73285 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12948017 chr17 46439246 Intron 6 82126 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1553752 chr17 46420708 Intron 6 63588 CEU:1.0;0.855, CHB:1.0;0.908, JPT:1.0;1.0 FUNCTIONAL_SNP rs1912154 chr17 46443594 Intron 6 86474 CEU:1.0;0.863, CHB:1.0;0.915, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12450081 chr17 46395243 Intron 6 38123 CEU:1.0;0.863, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs12449653 chr17 46473686 Intron 6 116566 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs9907699 chr17 46434138 Intron 6 77018 CEU:1.0;0.856, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12452212 chr17 46391078 Intron 6 33958 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7212149 chr17 46463688 Intron 6 106568 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7212930 chr17 46361825 Intron 7 4705 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7217025 chr17 46447390 Intron 7 90270 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2056458 chr17 46458003 Intron 7 100883 CEU:1.0;0.859, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7219985 chr17 46378705 Intron 7 21585 CEU:1.0;1.0, CHB:1.0;0.915, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs9916227 chr17 46389912 Intron 7 32792 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8074443 chr17 46417813 Intron 7 60693 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs4312351 chr17 46377892 Intron 7 20772 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9909872 chr17 46353797 Intron 7 3323 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9910535 chr17 46368471 Intron 7 11351 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8068397 chr17 46359606 Intron 7 2486 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs17694895 chr17 46361755 Intron 7 4635 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.91 FUNCTIONAL_SNP rs5000249 chr17 46497380 Intron 7 140260 CEU:1.0;0.864, CHB:1.0;0.822, JPT:1.0;0.91, YRI:1.0;1.0 FUNCTIONAL_SNP rs7221770 chr17 46399835 Intron 7 42715 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7222452 chr17 46409991 Intron 7 52871 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9897162 chr17 46424789 Intron 7 67669 CEU:1.0;0.863, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs7216971 chr17 46447307 Intron 7 90187 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.643 FUNCTIONAL_SNP rs12940365 chr17 46474610 Intron 7 117490 CEU:0.947;0.813, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs7209043 chr17 46495951 Intron 7 138831 CEU:1.0;0.864, CHB:1.0;0.822, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs1553749 chr17 46441441 Intron 7 84321 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1553753 chr17 46420806 Intron 7 63686 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2175158 chr17 46481070 Intron 7 123950 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9906193 chr17 46366135 Intron 7 9015 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7219816 chr17 46393794 Intron 7 36674 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8065385 chr17 46362573 Intron 7 5453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.619 FUNCTIONAL_SNP rs6504172 chr17 46407434 Intron 7 50314 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.643 FUNCTIONAL_SNP rs7210708 chr17 46444610 Intron 7 87490 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9303542 chr17 46411500 Intron 7 ASSOCIATION 20852632 Ovarian cancer 6.0 SKAP1 FUNCTIONAL_SNP rs9891073 chr17 46438249 Intron 4 26749 CEU:0.947;0.852, CHB:1.0;1.0, JPT:1.0;0.752, YRI:1.0;0.962 FUNCTIONAL_SNP rs7217120 chr17 46484755 Intron 4 73255 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.923 FUNCTIONAL_SNP rs9909002 chr17 46426468 Intron 5a 14968 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.961 FUNCTIONAL_SNP rs7209855 chr17 46388803 Intron 5a 22697 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.923 FUNCTIONAL_SNP rs7213513 chr17 46392294 Intron 5b 19206 CEU:0.948;0.814, CHB:1.0;0.904, JPT:1.0;0.753, YRI:1.0;0.964 FUNCTIONAL_SNP rs12946636 chr17 46472432 Intron 5b 60932 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.923 FUNCTIONAL_SNP rs7207826 chr17 46500673 Intron 6 89173 CEU:0.945;0.807, CHB:1.0;0.81, JPT:1.0;0.751, YRI:1.0;0.961 FUNCTIONAL_SNP rs9894812 chr17 46389953 Intron 6 21547 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.923 FUNCTIONAL_SNP rs12944592 chr17 46430405 Intron 6 18905 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.961 FUNCTIONAL_SNP rs12948017 chr17 46439246 Intron 6 27746 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.961 FUNCTIONAL_SNP rs1912154 chr17 46443594 Intron 6 32094 CEU:0.945;0.807, CHB:0.901;0.811, JPT:1.0;0.751, YRI:1.0;0.961 FUNCTIONAL_SNP rs12450081 chr17 46395243 Intron 6 16257 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;0.735, YRI:1.0;0.924 FUNCTIONAL_SNP rs12449653 chr17 46473686 Intron 6 62186 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.672, YRI:1.0;0.961 FUNCTIONAL_SNP rs9907699 chr17 46434138 Intron 6 22638 CEU:0.944;0.804, CHB:1.0;0.904, JPT:1.0;0.753, YRI:1.0;0.964 FUNCTIONAL_SNP rs12452212 chr17 46391078 Intron 6 20422 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.961 FUNCTIONAL_SNP rs7212149 chr17 46463688 Intron 6 52188 CEU:0.948;0.814, CHB:1.0;0.904, JPT:1.0;0.753, YRI:1.0;0.964 FUNCTIONAL_SNP rs7217025 chr17 46447390 Intron 7 35890 CEU:0.946;0.809, CHB:1.0;0.904, JPT:1.0;0.753, YRI:1.0;0.964 FUNCTIONAL_SNP rs9916227 chr17 46389912 Intron 7 21588 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.961 FUNCTIONAL_SNP rs7222452 chr17 46409991 Intron 7 1509 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.961 FUNCTIONAL_SNP rs5000249 chr17 46497380 Intron 7 85880 CEU:0.948;0.814, CHB:1.0;0.811, JPT:1.0;0.753, YRI:1.0;0.964 FUNCTIONAL_SNP rs7221770 chr17 46399835 Intron 7 11665 CEU:0.948;0.814, CHB:1.0;0.904, JPT:1.0;0.753, YRI:1.0;0.964 FUNCTIONAL_SNP rs8074443 chr17 46417813 Intron 7 6313 CEU:0.948;0.814, CHB:1.0;0.904, JPT:0.897;0.669, YRI:1.0;0.964 FUNCTIONAL_SNP rs2175158 chr17 46481070 Intron 7 69570 CEU:0.946;0.85, CHB:1.0;0.904, JPT:1.0;0.753, YRI:1.0;0.964 FUNCTIONAL_SNP rs9897162 chr17 46424789 Intron 7 13289 CEU:0.947;0.812, CHB:1.0;0.904, JPT:1.0;0.753, YRI:1.0;0.819 FUNCTIONAL_SNP rs7216971 chr17 46447307 Intron 7 35807 CEU:0.948;0.814, CHB:1.0;0.904, JPT:1.0;0.752, YRI:1.0;0.657 FUNCTIONAL_SNP rs7209043 chr17 46495951 Intron 7 84451 CEU:0.947;0.814, CHB:1.0;0.719, JPT:1.0;0.81, YRI:1.0;0.96 FUNCTIONAL_SNP rs1553749 chr17 46441441 Intron 7 29941 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.961 FUNCTIONAL_SNP rs1553753 chr17 46420806 Intron 7 9306 CEU:0.944;0.845, CHB:1.0;0.904, JPT:1.0;0.809, YRI:1.0;0.963 FUNCTIONAL_SNP rs7219816 chr17 46393794 Intron 7 17706 CEU:0.948;0.814, CHB:1.0;0.904, JPT:1.0;0.753, YRI:1.0;0.964 FUNCTIONAL_SNP rs6504172 chr17 46407434 Intron 7 4066 CEU:0.945;0.807, CHB:1.0;0.903, JPT:1.0;0.751, YRI:1.0;0.662 FUNCTIONAL_SNP rs7210708 chr17 46444610 Intron 7 33110 CEU:0.946;0.809, CHB:1.0;1.0, JPT:1.0;0.753, YRI:1.0;0.964 LEAD_SNP rs6504340 chr17 46617019 Intergenic 5b ASSOCIATION 20195514 Primary tooth development (number of teeth) 6.22184874962 HOXB1 - HOXB2 FUNCTIONAL_SNP rs7207109 chr17 46607817 Coding 5b 9202 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12939811 chr17 46607958 Coding 5b 9061 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2229302 chr17 46620402 Exon,non-coding 4 3383 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8079617 chr17 46610028 Intergenic 2b 6991 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8073963 chr17 46609918 Intergenic 2b 7101 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs8072250 chr17 46569216 Intergenic 4 47803 CEU:0.931;0.812 FUNCTIONAL_SNP rs35621842 chr17 46606222 Intergenic 4 10797 CEU:1.0;0.874, CHB:1.0;1.0 FUNCTIONAL_SNP rs4793854 chr17 46572133 Intergenic 4 44886 CEU:1.0;0.939 FUNCTIONAL_SNP rs8074125 chr17 46610060 Intergenic 5a 6959 CEU:1.0;0.854, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8071207 chr17 46584016 Intergenic 5a 33003 CEU:1.0;0.939, CHB:1.0;0.511 FUNCTIONAL_SNP rs7225995 chr17 46596268 Intergenic 5b 20751 CEU:0.931;0.812, CHB:1.0;0.57 FUNCTIONAL_SNP rs4793889 chr17 46592352 Intergenic 5b 24667 CEU:1.0;0.861, CHB:1.0;0.511 FUNCTIONAL_SNP rs17703660 chr17 46567134 Intergenic 5b 49885 CEU:0.931;0.812 FUNCTIONAL_SNP rs8064626 chr17 46567851 Intergenic 5b 49168 CEU:0.928;0.803 FUNCTIONAL_SNP rs9904760 chr17 46575031 Intergenic 5b 41988 CEU:0.931;0.812 FUNCTIONAL_SNP rs9905940 chr17 46614102 Intergenic 7 2917 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2326017 chr17 46720565 Intron 5b ASSOCIATION 19734545 Cognitive performance 6.52287874528 HOXB9 - RPL9P28 FUNCTIONAL_SNP rs3744772 chr17 46713532 Intergenic 5b 7033 CEU:1.0;0.954, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs46522 chr17 46988597 Intron 5a ASSOCIATION 21378990 Coronary heart disease 7.69897000434 UBE2Z FUNCTIONAL_SNP rs2291725 chr17 47039132 Coding 4 50535 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs1058018 chr17 47000251 Coding 6 11654 CEU:1.0;0.849, CHB:1.0;0.931, JPT:1.0;0.94 FUNCTIONAL_SNP rs15563 chr17 47005193 Exon,non-coding 6 16596 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1057897 chr17 47005509 Exon,non-coding 4 16912 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4793992 chr17 47008207 Intron 4 19610 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4794004 chr17 47038471 Intron 4 49874 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs2546491 chr17 46977916 Intron 4 10681 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3895874 chr17 47047868 Intergenic 4 59271 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs12602746 chr17 47031741 Intergenic 4 43144 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs4294857 chr17 46983391 Intron 5a 5206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2291726 chr17 47039254 Intron 5b 50657 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs937301 chr17 47046276 Intergenic 5b 57679 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs8182364 chr17 47018025 Intron 5b 29428 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2112617 chr17 46977125 Intron 5b 11472 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12453374 chr17 46994846 Intron 5b 6249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4793605 chr17 47035869 Intergenic 6 47272 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs318090 chr17 46991752 Intron 6 3155 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4793995 chr17 47019399 Intron 6 30802 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs3848460 chr17 47047114 Intergenic 6 58517 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;0.944 FUNCTIONAL_SNP rs11079844 chr17 47028334 Intergenic 6 39737 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs12602933 chr17 47029280 Intergenic 6 40683 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs1994970 chr17 47014127 Intron 6 25530 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4793998 chr17 47019899 Intron 6 31302 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs12601858 chr17 47017477 Intron 7 28880 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4793991 chr17 47001801 Intron 7 13204 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs318095 chr17 46974734 Intron 7 13863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12453394 chr17 46994970 Intron 7 6373 CEU:1.0;0.915, CHB:1.0;1.0, JPT:1.0;0.889 FUNCTIONAL_SNP rs4794003 chr17 47029904 Intergenic 7 41307 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs4793996 chr17 47019597 Intron 7 31000 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs9747646 chr17 47016882 Intron 7 28285 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17708633 chr17 47011620 Intron 7 23023 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs962272 chr17 46978283 Intron 7 10314 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs957557 chr17 47003221 Intron 7 14624 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9674544 chr17 47084711 Intron 4 ASSOCIATION 20195514 Primary tooth development (number of teeth) 7.69897000434 IGF2BP1 ASSOCIATION 20195514 Primary tooth development (time to first tooth eruption) 6.09691001301 IGF2BP1 FUNCTIONAL_SNP rs10853104 chr17 47092076 Intron 4 7365 CEU:0.914;0.8 FUNCTIONAL_SNP rs11079850 chr17 47092252 Intron 5b 7541 CEU:1.0;0.921, YRI:1.0;0.931 FUNCTIONAL_SNP rs11079851 chr17 47092310 Intron 5b 7599 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;0.92, YRI:1.0;0.934 FUNCTIONAL_SNP rs1994969 chr17 47080431 Intron 5b 4280 CEU:1.0;0.921, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12939375 chr17 47089717 Intron 7 5006 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs8076012 chr17 47101989 Intron 7 17278 CEU:0.956;0.809, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs7210100 chr17 47436749 Intron 7 ASSOCIATION 21602798 Prostate cancer 12.5228787453 ZNF652 LEAD_SNP rs16948048 chr17 47440466 Intron 4 ASSOCIATION 19430483 Diastolic blood pressure 8.30102999566 ZNF652 FUNCTIONAL_SNP rs12940887 chr17 47402807 Intron 7 37659 CEU:0.957;0.879, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1035050 chr17 47564012 Intergenic 4 ASSOCIATION 19416921 Bipolar disorder 5.04575749056 PHB - NGFR LEAD_SNP rs2075555 chr17 48274291 Intron 4 ASSOCIATION 17903305 Breast cancer 7.09691001301 COL1A1 LEAD_SNP rs9635759 chr17 49613785 Intergenic 6 ASSOCIATION 21102462 Menarche (age at onset) 12.15490196 RPL7P48 - CA10 FUNCTIONAL_SNP rs17585461 chr17 49615545 Intergenic 7 1760 CEU:1.0;0.946, CHB:1.0;0.819, JPT:1.0;0.693, YRI:1.0;1.0 FUNCTIONAL_SNP rs9635758 chr17 49612200 Intergenic 7 1585 CEU:1.0;1.0, CHB:1.0;0.906, JPT:1.0;1.0, YRI:0.915;0.773 LEAD_SNP rs8073783 chr17 51237941 Intergenic 5a ASSOCIATION 18846501 Conduct disorder (interaction) 5.09691001301 CA10 - RPS2P48 LEAD_SNP rs1431318 chr17 54192523 Intergenic 6 ASSOCIATION 21668797 Cannabis dependence 6.04575749056 PCTP - ANKFN1 FUNCTIONAL_SNP rs1431313 chr17 54199259 Intergenic 4 6736 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs11871044 chr17 54222167 Intergenic 6 29644 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs4427864 chr17 54202031 Intergenic 6 9508 CEU:0.958;0.816, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs11871068 chr17 54222266 Intergenic 6 29743 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs8082496 chr17 54209768 Intergenic 7 17245 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 LEAD_SNP rs8065311 chr17 54203360 Intergenic 7 ASSOCIATION 21668797 Cannabis dependence 5.69897000434 PCTP - ANKFN1 FUNCTIONAL_SNP rs17819973 chr17 54198297 Intergenic 6 5063 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16956711 chr17 54209353 Intergenic 7 5993 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1019238 chr17 54278715 Intron 7 ASSOCIATION 21668797 Cannabis dependence 6.22184874962 ANKFN1 FUNCTIONAL_SNP rs8065901 chr17 54261498 Intron 5a 17217 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4794626 chr17 54256139 Intron 7 22576 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4794627 chr17 54256166 Intron 7 22549 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4794628 chr17 54256256 Intron 7 22459 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2332598 chr17 54261142 Intron 7 17573 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16956852 chr17 54256454 Intron 7 22261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16956861 chr17 54256531 Intron 7 22184 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2215767 chr17 54256633 Intron 7 22082 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1019239 chr17 54278759 Intron 7 44 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7208317 chr17 54257673 Intron 7 21042 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12449568 chr17 54430155 Intron 7 ASSOCIATION 18391950 Height 5.69897000434 ANKFN1 LEAD_SNP rs17760296 chr17 54615617 Intergenic 6 ASSOCIATION 20023658 Nonsyndromic cleft lip with or without cleft palate 5.15490195999 ANKFN1 - RPL39P33 FUNCTIONAL_SNP rs17760285 chr17 54615170 Intergenic 7 447 CEU:1.0;1.0, YRI:1.0;0.659 LEAD_SNP rs227731 chr17 54773238 Intergenic 6 ASSOCIATION 20023658 Nonsyndromic cleft lip with or without cleft palate 8.0 NOG - C17orf67 FUNCTIONAL_SNP rs227727 chr17 54776955 Intergenic 4 3717 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.738;0.511 LEAD_SNP rs4794665 chr17 54850329 Intergenic 3a ASSOCIATION 18391951 Height 7.0 NOG - C17orf67 LEAD_SNP rs792376 chr17 55438556 Intron 6 ASSOCIATION 20595579 Longevity 6.69897000434 MSI2 FUNCTIONAL_SNP rs11652270 chr17 55434873 Intron 2b 3683 CEU:1.0;0.913, CHB:1.0;0.535, JPT:1.0;0.625, YRI:1.0;0.586 FUNCTIONAL_SNP rs792374 chr17 55440060 Intron 7 1504 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.926, YRI:1.0;0.625 FUNCTIONAL_SNP rs792378 chr17 55436366 Intron 7 2190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs792402 chr17 55418733 Intron 7 19823 CEU:1.0;0.828, JPT:1.0;0.514 FUNCTIONAL_SNP rs11079290 chr17 55423605 Intron 7 14951 CEU:1.0;0.913, JPT:1.0;0.514, YRI:1.0;1.0 LEAD_SNP rs8074980 chr17 56010960 Intron 5b ASSOCIATION 20802204 Multiple sclerosis--Brain Glutamate Levels 5.69897000434 CUEDC1 - VEZF1 LEAD_SNP rs2257205 chr17 56448297 Coding 6 ASSOCIATION 20686608 Pancreatic cancer 5.09691001301 RNF43 LEAD_SNP rs9303401 chr17 56847945 Intron 7 ASSOCIATION 17903297 Cognitive test performance 5.30102999566 PPM1E FUNCTIONAL_SNP rs6503877 chr17 56841948 Intron 3a 5997 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs7218362 chr17 56888299 Intron 6 40354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs1390006 chr17 56890663 Intron 6 42718 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs6503882 chr17 56915761 Intron 7 67816 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs8068952 chr17 59286644 Intron 7 ASSOCIATION 20548946 Vertical cup-disc ratio 7.52287874528 BCAS3 FUNCTIONAL_SNP rs12935896 chr17 59279706 Intron 3b 6938 CEU:0.932;0.814 FUNCTIONAL_SNP rs11651885 chr17 59286263 Intron 5b 381 CEU:0.929;0.863, YRI:0.821;0.571 FUNCTIONAL_SNP rs12940987 chr17 59269257 Intron 7 17387 CEU:0.929;0.863 FUNCTIONAL_SNP rs917571 chr17 59255231 Intron 7 31413 CEU:0.929;0.863 FUNCTIONAL_SNP rs12940510 chr17 59260643 Intron 7 26001 CEU:0.929;0.863 FUNCTIONAL_SNP rs8077544 chr17 59263369 Intron 7 23275 CEU:0.929;0.863 LEAD_SNP rs9895661 chr17 59456589 Intron 4 ASSOCIATION 20383146 Chronic kidney disease 15.0 BCAS3 FUNCTIONAL_SNP rs11657044 chr17 59450105 Intron 7 6484 CEU:1.0;0.91 FUNCTIONAL_SNP rs9905274 chr17 59450441 Intron 7 6148 CEU:1.0;0.927, CHB:0.834;0.551, JPT:0.797;0.634 FUNCTIONAL_SNP rs1010269 chr17 59448945 Intron 7 7644 CEU:0.926;0.857, CHB:0.941;0.663, JPT:1.0;0.682 LEAD_SNP rs8068318 chr17 59483766 Intron 5b ASSOCIATION 20383145 Serum creatinine 9.52287874528 TBX2 FUNCTIONAL_SNP rs11871637 chr17 59490235 Exon,non-coding 4 6469 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95 FUNCTIONAL_SNP rs2286526 chr17 59472057 Intergenic 4 11709 CEU:1.0;0.905, CHB:0.775;0.52 FUNCTIONAL_SNP rs2240736 chr17 59485393 Intron 5b 1627 CEU:1.0;1.0, CHB:1.0;0.792, JPT:1.0;0.819 FUNCTIONAL_SNP rs2270114 chr17 59478776 Intron 5b 4990 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;1.0 FUNCTIONAL_SNP rs2078169 chr17 59476062 Intergenic 5b 7704 CEU:1.0;0.908, CHB:0.949;0.819, JPT:1.0;0.904 LEAD_SNP rs2079795 chr17 59496649 Intergenic 5b ASSOCIATION 19893584 Height 5.52287874528 C17orf82 - TBX4 FUNCTIONAL_SNP rs740755 chr17 59496797 Intergenic 5b 148 CEU:1.0;0.824, CHB:0.943;0.888, JPT:1.0;1.0, YRI:0.954;0.836 LEAD_SNP rs757608 chr17 59497277 Intergenic 5b ASSOCIATION 18391951 Height 7.22184874962 C17orf82 - TBX4 FUNCTIONAL_SNP rs9905385 chr17 59498250 Intergenic 5b 973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9892365 chr17 59491384 Intergenic 5b 5893 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.85 FUNCTIONAL_SNP rs7214743 chr17 59498052 Intergenic 7 775 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2251393 chr17 60778932 Exon,non-coding 7 ASSOCIATION 21658281 Sudden cardiac arrest 6.39794000867 MARCH10 LEAD_SNP rs4343 chr17 61566031 Coding 2b ASSOCIATION 20066004 Angiotensin-converting enzyme activity 24.5228787453 ACE LEAD_SNP rs7209435 chr17 61712964 Intron 7 ASSOCIATION 18391951 Height 6.15490195999 MAP3K3 LEAD_SNP rs2665838 chr17 61966465 Intergenic 4 ASSOCIATION 20881960 Height 24.3010299957 GH2 - CSH1 FUNCTIONAL_SNP rs15637 chr17 61772050 Exon,non-coding 4 194415 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7921 chr17 62006259 Exon,non-coding 5b 39794 CEU:0.911;0.831, JPT:1.0;0.585 FUNCTIONAL_SNP rs6504182 chr17 61823672 Exon,non-coding 3a 142793 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13380863 chr17 61780793 Exon,non-coding 5b 185672 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.849;0.558 FUNCTIONAL_SNP rs8076717 chr17 61850301 Intron 4 116164 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.92;0.61 FUNCTIONAL_SNP rs2854207 chr17 61947107 Intergenic 4 19358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2955250 chr17 61959740 Intergenic 4 6725 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8078462 chr17 61857937 Intron 4 108528 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8069687 chr17 61883023 Intron 5a 83442 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3020619 chr17 61993137 Intron 5b 26672 CEU:0.956;0.914, JPT:1.0;0.65, YRI:1.0;0.801 FUNCTIONAL_SNP rs7211213 chr17 61769456 Intron 5b 197009 CEU:1.0;0.957, CHB:1.0;0.585, JPT:1.0;1.0 FUNCTIONAL_SNP rs9747164 chr17 61864787 Intron 5b 101678 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.92;0.579 FUNCTIONAL_SNP rs2003549 chr17 62008437 Intron 5b 41972 CEU:0.911;0.831 FUNCTIONAL_SNP rs9895920 chr17 61852719 Intron 5b 113746 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2727301 chr17 61965043 Intergenic 6 1422 CEU:1.0;0.917 FUNCTIONAL_SNP rs9891018 chr17 61827856 Intron 6 138609 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1877316 chr17 61766880 Intron 6 199585 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2854218 chr17 61942940 Intergenic 6 23525 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.915;0.594 FUNCTIONAL_SNP rs11079511 chr17 61858537 Intron 6 107928 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.92;0.61 FUNCTIONAL_SNP rs2013288 chr17 61785904 Intron 6 180561 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2941551 chr17 61978548 Intergenic 6 12083 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11651075 chr17 61837207 Intron 7 129258 CEU:0.956;0.914, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7225092 chr17 61864005 Intron 7 102460 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7207569 chr17 61867787 Intron 7 98678 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2727300 chr17 61965398 Intergenic 7 1067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7223966 chr17 61893398 Intron 7 73067 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8075422 chr17 61804686 Intron 7 161779 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3020608 chr17 61979993 Intergenic 7 13528 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.816 FUNCTIONAL_SNP rs2665826 chr17 61944924 Intergenic 7 21541 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8067064 chr17 61825984 Intron 7 140481 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2727317 chr17 61961302 Intergenic 7 5163 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs6504218 chr17 62408299 Intergenic 7 ASSOCIATION 21378988 Coronary heart disease 6.0 PECAM1 - C17orf60 FUNCTIONAL_SNP rs9902260 chr17 62399872 Intergenic 2a 8427 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.556 FUNCTIONAL_SNP rs9303470 chr17 62404452 Intergenic 2b 3847 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.959;0.765 FUNCTIONAL_SNP rs9303469 chr17 62404441 Intergenic 2b 3858 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.803 FUNCTIONAL_SNP rs4968721 chr17 62409586 Intergenic 4 1287 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs12936766 chr17 62408949 Intergenic 4 650 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs940743 chr17 62368752 Intergenic 4 39547 CEU:0.919;0.845 FUNCTIONAL_SNP rs1050382 chr17 62400000 Intergenic 5a 8299 CEU:1.0;0.922, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.556 FUNCTIONAL_SNP rs2070784 chr17 62406694 Intergenic 5b 1605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6808 chr17 62400575 Intergenic 5b 7724 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.579 FUNCTIONAL_SNP rs1122800 chr17 62391365 Intergenic 5b 16934 CEU:1.0;0.922, CHB:1.0;0.642, JPT:0.804;0.609 FUNCTIONAL_SNP rs2812 chr17 62401118 Intergenic 5b 7181 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.556 FUNCTIONAL_SNP rs2070783 chr17 62406971 Intergenic 6 1328 CEU:1.0;0.96, CHB:1.0;0.854, JPT:1.0;0.775, YRI:1.0;1.0 FUNCTIONAL_SNP rs1108592 chr17 62405810 Intergenic 7 2489 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs9892152 chr17 62401965 Intergenic 7 6334 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.556 LEAD_SNP rs8074751 chr17 63642542 Intron 7 ASSOCIATION 20732626 Attention deficit hyperactivity disorder 6.0 CCDC46 FUNCTIONAL_SNP rs9910800 chr17 63640677 Intron 5b 1865 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7222221 chr17 63634368 Intron 5b 8174 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs972455 chr17 63636671 Intron 6 5871 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs2189790 chr17 63644270 Intron 6 1728 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8081822 chr17 63644243 Intron 7 1701 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2079301 chr17 63641770 Intron 7 772 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7209395 chr17 64133726 Intron 6 ASSOCIATION 19851299 Weight 5.52287874528 CCDC46 FUNCTIONAL_SNP rs6504401 chr17 64174971 Intron 5a 41245 CEU:1.0;1.0 FUNCTIONAL_SNP rs16958921 chr17 64172189 Intron 5b 38463 CEU:1.0;1.0 FUNCTIONAL_SNP rs7216429 chr17 64160335 Intron 6 26609 CEU:1.0;1.0 FUNCTIONAL_SNP rs17690038 chr17 64195854 Intergenic 6 62128 CEU:1.0;0.864 FUNCTIONAL_SNP rs8078801 chr17 64132745 Intron 7 981 CEU:1.0;1.0, YRI:1.0;0.558 LEAD_SNP rs9912468 chr17 64318357 Intron 7 ASSOCIATION 21076409 Ventricular conduction 8.0 PRKCA FUNCTIONAL_SNP rs4433842 chr17 64322683 Intron 4 4326 CEU:1.0;0.843, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.807 FUNCTIONAL_SNP rs17633401 chr17 64301363 Intron 4 16994 CEU:1.0;0.851, CHB:1.0;0.624, JPT:1.0;0.59, YRI:1.0;0.514 FUNCTIONAL_SNP rs7210446 chr17 64307014 Intron 5a 11343 CEU:1.0;1.0, CHB:1.0;0.624, JPT:1.0;0.59, YRI:1.0;0.771 FUNCTIONAL_SNP rs9892651 chr17 64303793 Intron 5b 14564 CEU:1.0;1.0, CHB:1.0;0.624, JPT:1.0;0.59, YRI:1.0;0.771 FUNCTIONAL_SNP rs9893075 chr17 64311249 Intron 5b 7108 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.771 FUNCTIONAL_SNP rs9890911 chr17 64315569 Intron 5b 2788 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12601850 chr17 64302652 Intron 5b 15705 CEU:1.0;0.884, CHB:1.0;0.624, JPT:1.0;0.582, YRI:1.0;0.771 FUNCTIONAL_SNP rs17706845 chr17 64310185 Intron 6 8172 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12940610 chr17 64312463 Intron 6 5894 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.771 FUNCTIONAL_SNP rs9303504 chr17 64315366 Intron 6 2991 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4328478 chr17 64307982 Intron 7 10375 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.771 FUNCTIONAL_SNP rs8081834 chr17 64331037 Intron 7 12680 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9910577 chr17 64314548 Intron 7 3809 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4577128 chr17 64308473 Intron 7 9884 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.771 FUNCTIONAL_SNP rs9910355 chr17 64315205 Intron 7 3152 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17645023 chr17 64917033 Intergenic 4 ASSOCIATION 21057379 Bipolar disorder and schizophrenia 6.22184874962 CACNG5 - CACNG4 LEAD_SNP rs8079702 chr17 68190826 Intergenic 6 ASSOCIATION 20195514 Primary tooth development (number of teeth) 14.0 KCNJ2 - CALM2P1 ASSOCIATION 20195514 Primary tooth development (time to first tooth eruption) 21.3979400087 KCNJ2 - CALM2P1 FUNCTIONAL_SNP rs8080944 chr17 68185586 Intergenic 6 5240 CEU:1.0;0.959, CHB:0.952;0.907, JPT:1.0;1.0, YRI:1.0;0.76 LEAD_SNP rs6501384 chr17 68291133 Intergenic 6 ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 5.22184874962 CALM2P1 - SOX9 FUNCTIONAL_SNP rs7225313 chr17 68303286 Intergenic 6 12153 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8074548 chr17 68275724 Intergenic 7 15409 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7222503 chr17 68299785 Intergenic 7 8652 CEU:0.957;0.916, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.738 FUNCTIONAL_SNP rs2215027 chr17 68279437 Intergenic 7 11696 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17779747 chr17 68494992 Intergenic 7 ASSOCIATION 19305409 QT interval 11.2218487496 CALM2P1 - SOX9 LEAD_SNP rs17718586 chr17 68644189 Intergenic 6 ASSOCIATION 21658281 Sudden cardiac arrest 7.69897000434 CALM2P1 - SOX9 LEAD_SNP rs1859962 chr17 69108753 Intergenic 5a ASSOCIATION 21743057 Prostate cancer 10.5228787453 CALM2P1 - SOX9 ASSOCIATION 19767753 Prostate cancer 15.6989700043 CALM2P1 - SOX9 ASSOCIATION 18264097 Prostate cancer 6.0 CALM2P1 - SOX9 ASSOCIATION 17603485 Prostate cancer 9.52287874528 CALM2P1 - SOX9 FUNCTIONAL_SNP rs984434 chr17 69108127 Intergenic 3a 626 CEU:1.0;0.962, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs8072254 chr17 69107816 Intergenic 4 937 CEU:1.0;0.962, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs8071558 chr17 69107673 Intergenic 4 1080 CEU:1.0;0.962, CHB:1.0;0.953, JPT:1.0;1.0 FUNCTIONAL_SNP rs7222314 chr17 69104938 Intergenic 5a 3815 CEU:0.959;0.92, CHB:1.0;0.911, JPT:1.0;0.868 FUNCTIONAL_SNP rs9889335 chr17 69115146 Intergenic 5b 6393 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4793529 chr17 69118636 Intergenic 6 9883 CEU:0.961;0.923, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs991429 chr17 69109773 Intergenic 6 1020 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8068266 chr17 69116935 Intergenic 7 8182 CEU:0.961;0.923, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs17765344 chr17 69106874 Intergenic 7 1879 CEU:1.0;0.962, CHB:1.0;0.911, JPT:1.0;1.0 LEAD_SNP rs8066857 chr17 70696103 Intron 5b ASSOCIATION 19451621 Amyotrophic lateral sclerosis 5.09691001301 SLC39A11 LEAD_SNP rs3816995 chr17 71335260 Intron 5b ASSOCIATION 19165232 Panic disorder 6.69897000434 SDK2 LEAD_SNP rs7219585 chr17 72268208 Intergenic 5b ASSOCIATION 21130836 Information processing speed 6.0 TTYH2 - DNAI2 FUNCTIONAL_SNP rs9911612 chr17 72263516 Intergenic 5a 4692 CEU:1.0;0.801 FUNCTIONAL_SNP rs9913532 chr17 72263630 Intergenic 6 4578 CEU:1.0;0.801 LEAD_SNP rs10512597 chr17 72699833 Intron 7 ASSOCIATION 20031577 Fibrinogen 10.096910013 CD300LF;RAB37 FUNCTIONAL_SNP rs35489971 chr17 72700943 Coding 6 1110 CEU:1.0;1.0, CHB:0.925;0.856, JPT:1.0;1.0, YRI:1.0;0.815 LEAD_SNP rs11077773 chr17 73060073 Exon,non-coding 4 ASSOCIATION 21130836 Information processing speed 5.09691001301 KCTD2 LEAD_SNP rs1055129 chr17 73872948 Intron 4 ASSOCIATION 21681796 White matter hypersensitivity burden 10.5228787453 TRIM47 FUNCTIONAL_SNP rs9902371 chr17 73897046 Intron 5b 24098 CEU:1.0;0.873, CHB:1.0;0.751, JPT:1.0;0.794 FUNCTIONAL_SNP rs3744021 chr17 73871911 Intron 5b 1037 CEU:0.956;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 LEAD_SNP rs3744028 chr17 73888672 Intron 5b ASSOCIATION 21681796 White matter hypersensitivity burden 14.3979400087 TRIM65 FUNCTIONAL_SNP rs9894383 chr17 73865657 Intergenic 2b 23015 CEU:1.0;0.832, CHB:1.0;1.0, JPT:1.0;0.915 FUNCTIONAL_SNP rs11869977 chr17 73857382 Intergenic 4 31290 CEU:1.0;0.844, CHB:1.0;0.92, JPT:1.0;0.925 FUNCTIONAL_SNP rs1463485 chr17 73851791 Intergenic 4 36881 CEU:1.0;0.801, CHB:1.0;0.852, JPT:0.923;0.851 FUNCTIONAL_SNP rs3744017 chr17 73871467 Intron 5b 17205 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs936393 chr17 73847613 Intron 5b 41059 CEU:1.0;0.832, CHB:1.0;0.851, JPT:0.913;0.834 FUNCTIONAL_SNP rs11870121 chr17 73858938 Intergenic 6 29734 CEU:1.0;0.801, CHB:1.0;0.852, JPT:1.0;0.925 LEAD_SNP rs3744064 chr17 75211208 Exon,non-coding 2b ASSOCIATION 19734545 Cognitive performance 6.15490195999 SEC14L1 LEAD_SNP rs9906155 chr17 75701697 Intergenic 5a ASSOCIATION 20966902 Body mass index 5.04575749056 SEPT9 - FLJ45079 FUNCTIONAL_SNP rs9914269 chr17 75702800 Intergenic 7 1103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6565681 chr17 78348494 Intron 3a ASSOCIATION 21048783 Moyamoya disease 7.69897000434 RNF213 LEAD_SNP rs10445407 chr17 79261809 Intron 5b ASSOCIATION 20834067 Longevity 6.0 SLC38A10 LEAD_SNP rs9894429 chr17 79596811 Coding 5b ASSOCIATION 20463881 Eye color traits 13.0457574906 NPLOC4 FUNCTIONAL_SNP rs6565604 chr17 79589242 Coding 5a 7569 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.574 FUNCTIONAL_SNP rs6565616 chr17 79612161 Coding 5b 15350 CEU:1.0;0.809, CHB:1.0;0.937, JPT:1.0;0.873 FUNCTIONAL_SNP rs7406219 chr17 79609410 Exon,non-coding 4 12599 CEU:1.0;0.813, CHB:1.0;0.94, JPT:1.0;0.873, YRI:1.0;0.514 FUNCTIONAL_SNP rs7217415 chr17 79618252 Intron 4 21441 CEU:1.0;0.813, CHB:1.0;0.94, JPT:1.0;0.873 FUNCTIONAL_SNP rs4074915 chr17 79579230 Intron 4 17581 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.944;0.532 FUNCTIONAL_SNP rs4074916 chr17 79579248 Intron 4 17563 CEU:1.0;1.0, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.574 FUNCTIONAL_SNP rs7406828 chr17 79619226 Intron 4 22415 CEU:1.0;0.813, CHB:1.0;0.882, JPT:1.0;0.873 FUNCTIONAL_SNP rs9905639 chr17 79614154 Intron 4 17343 CEU:1.0;0.813, CHB:1.0;0.94, JPT:1.0;0.873, YRI:1.0;0.514 FUNCTIONAL_SNP rs6565605 chr17 79589359 Intron 5a 7452 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.514 FUNCTIONAL_SNP rs7222241 chr17 79574714 Intron 5b 22097 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.574 FUNCTIONAL_SNP rs6565612 chr17 79602820 Intron 5b 6009 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.514 FUNCTIONAL_SNP rs11652797 chr17 79574124 Intron 6 22687 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.574 FUNCTIONAL_SNP rs3935543 chr17 79579874 Intron 6 16937 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.574 FUNCTIONAL_SNP rs7405901 chr17 79587813 Intron 6 8998 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.574 LEAD_SNP rs9303029 chr17 80408815 Intergenic 2a ASSOCIATION 18464913 Protein quantitative trait loci 6.39794000867 C17orf62 LEAD_SNP rs1046896 chr17 80685533 Exon,non-coding 5b ASSOCIATION 20858683 Glycated hemoglobin levels 25.6989700043 FN3KRP FUNCTIONAL_SNP rs1046917 chr17 80685655 Exon,non-coding 5b 122 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs1046875 chr17 80685426 Exon,non-coding 5b 107 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.906 FUNCTIONAL_SNP rs7225515 chr17 80795783 Intron 2b 110250 CEU:1.0;0.894, JPT:0.947;0.816 FUNCTIONAL_SNP rs9894705 chr17 80823758 Intron 4 138225 CEU:0.943;0.841, JPT:0.945;0.774 FUNCTIONAL_SNP rs9912684 chr17 80873067 Intron 4 187534 CEU:1.0;0.89, JPT:0.847;0.717 FUNCTIONAL_SNP rs9906115 chr17 80791469 Intron 5b 105936 CEU:1.0;1.0, JPT:0.947;0.816, YRI:0.923;0.503 FUNCTIONAL_SNP rs4075209 chr17 80800027 Intron 5b 114494 CEU:1.0;0.894, JPT:0.947;0.816 FUNCTIONAL_SNP rs9900369 chr17 80829807 Intron 5b 144274 CEU:1.0;0.858, JPT:0.937;0.785 FUNCTIONAL_SNP rs9897951 chr17 80810662 Intron 6 125129 CEU:1.0;0.894, JPT:0.943;0.801 LEAD_SNP rs7226677 chr18 278796 Intergenic 7 ASSOCIATION 20351715 Bipolar disorder and major depressive disorder (combined) 5.39794000867 THOC1 - COLEC12 ASSOCIATION 18711365 Bipolar disorder 5.15490195999 THOC1 - COLEC12 FUNCTIONAL_SNP rs6506015 chr18 258284 Intergenic 7 20512 CEU:1.0;0.802, CHB:1.0;1.0, JPT:1.0;0.904 LEAD_SNP rs8097348 chr18 1595021 Intergenic 7 ASSOCIATION 19727025 Exercise (leisure time) 5.15490195999 C18orf2 - METTL4 FUNCTIONAL_SNP rs2111925 chr18 1597409 Intergenic 5a 2388 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2111926 chr18 1597149 Intergenic 5a 2128 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2052420 chr18 1597903 Intergenic 5a 2882 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8094734 chr18 1594836 Intergenic 6 185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9646479 chr18 1598183 Intergenic 6 3162 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10513937 chr18 1600712 Intergenic 6 5691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8098457 chr18 1604258 Intergenic 6 9237 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7229607 chr18 1601667 Intergenic 6 6646 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2111929 chr18 1607583 Intergenic 6 12562 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs4389203 chr18 1599124 Intergenic 6 4103 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11080871 chr18 1596889 Intergenic 6 1868 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9646456 chr18 1598247 Intergenic 6 3226 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4797930 chr18 1599498 Intergenic 6 4477 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9944863 chr18 1600972 Intergenic 7 5951 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4502301 chr18 1594553 Intergenic 7 468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.913;0.8 FUNCTIONAL_SNP rs12605872 chr18 1598077 Intergenic 7 3056 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11080872 chr18 1603406 Intergenic 7 8385 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8099756 chr18 1599150 Intergenic 7 4129 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs759740 chr18 1604630 Intergenic 7 9609 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.686 FUNCTIONAL_SNP rs2193726 chr18 1602749 Intergenic 7 7728 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2160961 chr18 1597436 Intergenic 7 2415 CEU:1.0;1.0 FUNCTIONAL_SNP rs2052419 chr18 1597982 Intergenic 7 2961 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8083526 chr18 1599089 Intergenic 7 4068 CEU:1.0;0.939, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2345036 chr18 1596536 Intergenic 7 1515 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12606415 chr18 1604098 Intergenic 7 9077 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1869532 chr18 1600081 Intergenic 7 5060 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1869533 chr18 1600216 Intergenic 7 5195 CEU:1.0;1.0 FUNCTIONAL_SNP rs4797926 chr18 1599212 Intergenic 7 4191 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8095975 chr18 1598887 Intergenic 7 3866 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4797928 chr18 1599263 Intergenic 7 4242 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs4797929 chr18 1599381 Intergenic 7 4360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs16941818 chr18 1600945 Intergenic 7 5924 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1879352 chr18 2498054 Intergenic 7 ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 5.04575749056 C18orf2 - METTL4 LEAD_SNP rs10460009 chr18 2948029 Intergenic 5a ASSOCIATION 21490949 Type 2 diabetes 5.04575749056 LPIN2 FUNCTIONAL_SNP rs10853287 chr18 2941377 Intergenic 6 6652 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7237848 chr18 4773110 Intergenic 7 ASSOCIATION 21738478 White blood cell types 6.69897000434 GAPDHL11 - PPIAP14 LEAD_SNP rs11662763 chr18 5857091 Intergenic 7 ASSOCIATION 20694011 Immunoglobulin A 5.30102999566 EPB41L3 - TMEM200C FUNCTIONAL_SNP rs7234672 chr18 5885157 Intergenic 5b 28066 CEU:1.0;0.868 FUNCTIONAL_SNP rs11665356 chr18 5886653 Intergenic 6 29562 CEU:1.0;0.93 FUNCTIONAL_SNP rs1940595 chr18 5885900 Intergenic 6 28809 CEU:1.0;0.93 FUNCTIONAL_SNP rs9959236 chr18 5883633 Intergenic 6 26542 CEU:1.0;0.93 FUNCTIONAL_SNP rs11662025 chr18 5886729 Intergenic 7 29638 CEU:1.0;0.93 FUNCTIONAL_SNP rs16948887 chr18 5884370 Intergenic 7 27279 CEU:1.0;0.93 FUNCTIONAL_SNP rs1940594 chr18 5882643 Intergenic 7 25552 CEU:1.0;0.93 FUNCTIONAL_SNP rs16948895 chr18 5886504 Intergenic 7 29413 CEU:1.0;0.93 LEAD_SNP rs597503 chr18 6939947 Intergenic 6 ASSOCIATION 21658281 Sudden cardiac arrest 7.69897000434 ARHGAP28 - LAMA1 FUNCTIONAL_SNP rs584440 chr18 6940522 Intergenic 5a 575 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4797271 chr18 6932938 Intergenic 6 7009 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs1261716 chr18 6939477 Intergenic 6 470 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.875, YRI:1.0;1.0 FUNCTIONAL_SNP rs530612 chr18 6942997 Intergenic 6 3050 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.934;0.659 FUNCTIONAL_SNP rs7244553 chr18 6939965 Intergenic 7 18 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.524 FUNCTIONAL_SNP rs4797272 chr18 6933057 Intergenic 7 6890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92 FUNCTIONAL_SNP rs2105657 chr18 6937974 Intergenic 7 1973 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.908;0.824 FUNCTIONAL_SNP rs8084092 chr18 6945448 Intergenic 7 5501 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.87;0.602 FUNCTIONAL_SNP rs489023 chr18 6947013 Intergenic 7 7066 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.918;0.571 LEAD_SNP rs16951095 chr18 7042911 Intergenic 7 ASSOCIATION 20876614 Non-small cell lung cancer 5.15490195999 LAMA1 LEAD_SNP rs7243299 chr18 7755771 Intergenic 5a ASSOCIATION 21546767 Dialysis-related mortality 5.09691001301 PTPRM LEAD_SNP rs8098064 chr18 8209269 Intergenic 7 ASSOCIATION 21546767 Dialysis-related mortality 5.39794000867 PTPRM LEAD_SNP rs7506045 chr18 11987272 Intergenic 6 ASSOCIATION 17434096 Stroke 6.15490195999 IMPA2 LEAD_SNP rs2542151 chr18 12779947 Intergenic 5b ASSOCIATION 18978792 Type 1 diabetes 7.04575749056 PSMG2 - PTPN2 ASSOCIATION 18587394 Crohn's disease 16.3010299957 PSMG2 - PTPN2 ASSOCIATION 17554300 Crohn's disease 6.69897000434 PSMG2 - PTPN2 ASSOCIATION 17554261 Crohn's disease 7.52287874528 PSMG2 - PTPN2 ASSOCIATION 17554260 Type 1 diabetes 14.0 PSMG2 - PTPN2 LEAD_SNP rs1893217 chr18 12809340 Intergenic 5a ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 11.3010299957 PTPN2 ASSOCIATION 20190752 Celiac disease 9.52287874528 PTPN2 ASSOCIATION 19430480 Type 1 diabetes 14.3979400087 PTPN2 FUNCTIONAL_SNP rs2542151 chr18 12779947 Intergenic 5b 29393 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs888270 chr18 12774894 Intergenic 5b 34446 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.823 LEAD_SNP rs2847281 chr18 12821593 Intergenic 5b ASSOCIATION 21300955 C-reactive protein 7.69897000434 PTPN2 FUNCTIONAL_SNP rs2852151 chr18 12841176 Intergenic 2b 19583 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12971201 chr18 12830538 Intergenic 5a 8945 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs674222 chr18 12848349 Intergenic 5b 26756 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.866 FUNCTIONAL_SNP rs2847298 chr18 12800120 Intergenic 7 21473 CEU:1.0;0.833, CHB:1.0;0.592, YRI:1.0;0.866 FUNCTIONAL_SNP rs2847286 chr18 12817815 Intergenic 7 3778 CEU:1.0;0.842, CHB:1.0;0.626, JPT:1.0;0.561, YRI:1.0;0.88 FUNCTIONAL_SNP rs2542160 chr18 12789246 Intergenic 7 32347 CEU:0.955;0.805, CHB:1.0;0.654, JPT:1.0;0.5, YRI:0.875;0.557 FUNCTIONAL_SNP rs2542162 chr18 12820900 Intergenic 7 693 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4797709 chr18 12882359 Intergenic 7 60766 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 LEAD_SNP rs4331426 chr18 20190795 Intergenic 7 ASSOCIATION 20694014 Tuberculosis 8.15490195999 RPS4XP18 - RBBP8 LEAD_SNP rs11661542 chr18 20223695 Intergenic 5a ASSOCIATION 20364137 Intracranial aneurysm 12.0 RPS4XP18 - RBBP8 FUNCTIONAL_SNP rs11878170 chr18 20160142 Intergenic 3a 63553 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs7231506 chr18 20188880 Intergenic 4 34815 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs17671384 chr18 20165521 Intergenic 4 58174 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.654 FUNCTIONAL_SNP rs2222394 chr18 20248288 Intergenic 4 24593 CEU:1.0;1.0, CHB:0.952;0.907, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs8095036 chr18 20150752 Intergenic 4 72943 CEU:1.0;1.0, CHB:1.0;0.954, JPT:0.95;0.861, YRI:1.0;0.654 FUNCTIONAL_SNP rs11082086 chr18 20264341 Intergenic 4 40646 CEU:1.0;0.962, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs4404180 chr18 20193357 Intergenic 4 30338 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs13381302 chr18 20211128 Intergenic 5a 12567 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1521919 chr18 20273882 Intergenic 5a 50187 CEU:1.0;0.924, CHB:0.952;0.907, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs12326842 chr18 20205437 Intergenic 5a 18258 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8096784 chr18 20186934 Intergenic 5b 36761 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;1.0 FUNCTIONAL_SNP rs7236642 chr18 20261886 Intergenic 5b 38191 CEU:1.0;0.961, CHB:1.0;0.756, JPT:1.0;0.866 FUNCTIONAL_SNP rs8091189 chr18 20247203 Intergenic 5b 23508 CEU:0.961;0.923, CHB:1.0;0.788, JPT:1.0;1.0 FUNCTIONAL_SNP rs12953657 chr18 20192907 Intergenic 5b 30788 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7244577 chr18 20283538 Intergenic 5b 59843 CEU:1.0;0.924, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs1013483 chr18 20253273 Intergenic 5b 29578 CEU:1.0;0.962, CHB:1.0;0.756, JPT:1.0;0.866 FUNCTIONAL_SNP rs8098265 chr18 20187295 Intergenic 5b 36400 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs4401144 chr18 20193668 Intergenic 5b 30027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs10853450 chr18 20235681 Intergenic 6 11986 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4800134 chr18 20192487 Intergenic 6 31208 CEU:1.0;0.924, CHB:1.0;0.83, JPT:1.0;0.826 FUNCTIONAL_SNP rs966345 chr18 20273466 Intergenic 6 49771 CEU:0.961;0.923, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs11081999 chr18 20151506 Intergenic 6 72189 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.951, YRI:1.0;0.651 FUNCTIONAL_SNP rs12457762 chr18 20226423 Intergenic 6 2728 CEU:1.0;0.951, YRI:1.0;1.0 FUNCTIONAL_SNP rs12454201 chr18 20281618 Intergenic 6 57923 CEU:0.961;0.923, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.589 FUNCTIONAL_SNP rs1530716 chr18 20290637 Intergenic 6 66942 CEU:0.951;0.904, CHB:0.948;0.856, JPT:1.0;1.0 FUNCTIONAL_SNP rs1546724 chr18 20271741 Intergenic 6 48046 CEU:0.961;0.923, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs12959243 chr18 20206802 Intergenic 7 16893 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4264496 chr18 20188237 Intergenic 7 35458 CEU:1.0;0.924, CHB:1.0;0.83, JPT:1.0;0.826 FUNCTIONAL_SNP rs11661377 chr18 20195446 Intergenic 7 28249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs414277 chr18 20280646 Intergenic 7 56951 CEU:0.961;0.923, CHB:1.0;0.756, JPT:1.0;0.909 FUNCTIONAL_SNP rs10853448 chr18 20230111 Intergenic 7 6416 CEU:1.0;0.889, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4530259 chr18 20196334 Intergenic 7 27361 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7243351 chr18 20148531 Intergenic 7 75164 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.654 FUNCTIONAL_SNP rs4800135 chr18 20192666 Intergenic 7 31029 CEU:1.0;0.924, CHB:1.0;0.83, JPT:1.0;0.826 FUNCTIONAL_SNP rs11661464 chr18 20218126 Intergenic 7 5569 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11664030 chr18 20261639 Intergenic 7 37944 CEU:1.0;0.96, CHB:1.0;0.911, JPT:1.0;1.0 FUNCTIONAL_SNP rs1879713 chr18 20205248 Intergenic 7 18447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1879714 chr18 20208786 Intergenic 7 14909 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4316864 chr18 20169284 Intergenic 7 54411 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.654 FUNCTIONAL_SNP rs6507223 chr18 20191031 Intergenic 7 32664 CEU:1.0;0.921, CHB:1.0;0.83, JPT:1.0;0.822 FUNCTIONAL_SNP rs10048248 chr18 20211943 Intergenic 7 11752 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs1791737 chr18 20276675 Intergenic 7 52980 CEU:0.961;0.923, CHB:1.0;0.756, JPT:1.0;0.909 FUNCTIONAL_SNP rs9653003 chr18 20196110 Intergenic 7 27585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9789208 chr18 20210259 Intergenic 7 13436 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11082010 chr18 20172405 Intergenic 7 51290 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.654 FUNCTIONAL_SNP rs878469 chr18 20254036 Intergenic 7 30341 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs11082043 chr18 20222985 Intergenic 7 710 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.654 FUNCTIONAL_SNP rs11082051 chr18 20234336 Intergenic 7 10641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11662668 chr18 20179381 Intergenic 7 44314 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.654 FUNCTIONAL_SNP rs11660602 chr18 20159556 Intergenic 7 64139 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.653 FUNCTIONAL_SNP rs13381475 chr18 20212591 Intergenic 7 11104 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11661175 chr18 20195437 Intergenic 7 28258 CEU:1.0;1.0, YRI:1.0;0.824 FUNCTIONAL_SNP rs12958098 chr18 20145379 Intergenic 7 78316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.654 FUNCTIONAL_SNP rs11660192 chr18 20194159 Intergenic 7 29536 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;0.951 FUNCTIONAL_SNP rs4267433 chr18 20202885 Intergenic 7 20810 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12962224 chr18 20143750 Intergenic 7 79945 CEU:0.96;0.885, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.577 FUNCTIONAL_SNP rs9807324 chr18 20220271 Intergenic 7 3424 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.654 LEAD_SNP rs11082304 chr18 20720973 Intergenic 5a ASSOCIATION 19247474 Smoking behavior 5.22184874962 CABLES1 LEAD_SNP rs4800148 chr18 20724328 Intergenic 7 ASSOCIATION 18391951 Height 8.39794000867 CABLES1 LEAD_SNP rs4369779 chr18 20735408 Intergenic 5b ASSOCIATION 20189936 Height 5.52287874528 CABLES1 LEAD_SNP rs1805081 chr18 21140432 Intergenic 5b ASSOCIATION 19151714 Obesity 6.52287874528 NPC1 LEAD_SNP rs9635963 chr18 21749615 Intergenic 5b ASSOCIATION 18464913 Protein quantitative trait loci 6.69897000434 OSBPL1A LEAD_SNP rs7227401 chr18 21938658 Intergenic 7 ASSOCIATION 20548944 Osteoporosis 6.39794000867 OSBPL1A FUNCTIONAL_SNP rs7236369 chr18 21925144 Intergenic 6 13514 CEU:0.958;0.881, CHB:1.0;0.877, JPT:1.0;1.0 FUNCTIONAL_SNP rs7226922 chr18 21938396 Intergenic 6 262 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.803 FUNCTIONAL_SNP rs1030110 chr18 21937021 Intergenic 6 1637 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.784 FUNCTIONAL_SNP rs2160810 chr18 21936838 Intergenic 7 1820 CEU:1.0;0.92, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;0.706 LEAD_SNP rs1840440 chr18 23257186 Intergenic 7 ASSOCIATION 19851299 Weight 6.52287874528 ZNF521 - SS18 FUNCTIONAL_SNP rs1840437 chr18 23230486 Intergenic 4 26700 CEU:1.0;0.836 FUNCTIONAL_SNP rs11083145 chr18 23248111 Intergenic 6 9075 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2592061 chr18 23214662 Intergenic 6 42524 CEU:1.0;0.836, YRI:0.938;0.593 FUNCTIONAL_SNP rs2019917 chr18 23226860 Intergenic 6 30326 CEU:1.0;0.836, YRI:0.939;0.622 FUNCTIONAL_SNP rs2728505 chr18 23220072 Intergenic 7 37114 CEU:1.0;0.836, YRI:0.939;0.622 FUNCTIONAL_SNP rs965178 chr18 23261220 Intergenic 7 4034 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2604481 chr18 23218084 Intergenic 7 39102 CEU:1.0;0.836, YRI:0.939;0.622 FUNCTIONAL_SNP rs2604480 chr18 23217996 Intergenic 7 39190 CEU:1.0;0.836, YRI:0.939;0.622 FUNCTIONAL_SNP rs12955389 chr18 23271286 Intergenic 7 14100 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs16942421 chr18 24156425 Intergenic 6 ASSOCIATION 21658281 Sudden cardiac arrest 9.09691001301 KCTD1 LEAD_SNP rs11083271 chr18 25926059 Intergenic 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (lobular) 5.09691001301 CDH2 - ARIH2P1 FUNCTIONAL_SNP rs4800302 chr18 25906569 Intergenic 6 19490 CEU:1.0;0.877, CHB:0.949;0.857, JPT:1.0;0.635, YRI:1.0;0.907 FUNCTIONAL_SNP rs17470662 chr18 25913391 Intergenic 6 12668 CEU:1.0;0.877, CHB:0.9;0.809, JPT:1.0;0.7, YRI:1.0;0.907 FUNCTIONAL_SNP rs8085353 chr18 25923362 Intergenic 6 2697 CEU:1.0;0.877, CHB:0.947;0.814, JPT:1.0;0.7, YRI:1.0;0.907 FUNCTIONAL_SNP rs8092587 chr18 25893268 Intergenic 7 32791 CEU:1.0;0.877, CHB:0.948;0.854, JPT:1.0;0.635, YRI:1.0;0.907 FUNCTIONAL_SNP rs11564293 chr18 25917014 Intergenic 7 9045 CEU:1.0;0.877, CHB:0.949;0.857, JPT:1.0;0.7, YRI:1.0;0.907 FUNCTIONAL_SNP rs1523231 chr18 25892172 Intergenic 7 33887 CEU:1.0;0.877, CHB:0.949;0.857, JPT:1.0;0.577, YRI:1.0;0.907 FUNCTIONAL_SNP rs1403576 chr18 25896073 Intergenic 7 29986 CEU:1.0;0.877, CHB:0.947;0.814, JPT:1.0;0.635, YRI:1.0;0.907 FUNCTIONAL_SNP rs17464146 chr18 25894293 Intergenic 7 31766 CEU:1.0;0.877, CHB:0.949;0.857, JPT:1.0;0.635, YRI:0.904;0.687 LEAD_SNP rs4131805 chr18 26059112 Intergenic 7 ASSOCIATION 17903296 Hip geometry 5.69897000434 CDH2 - ARIH2P1 FUNCTIONAL_SNP rs9959810 chr18 26062152 Intergenic 5a 3040 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4145170 chr18 26676672 Intergenic 5a ASSOCIATION 20125193 Cognitive test performance 5.52287874528 ARIH2P1 - DSC3 FUNCTIONAL_SNP rs8099442 chr18 26676606 Intergenic 4 66 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2729409 chr18 28141688 Intergenic 6 ASSOCIATION 18464913 Protein quantitative trait loci 5.52287874528 ARIH2P1 - DSC3 FUNCTIONAL_SNP rs2542720 chr18 28137737 Intergenic 6 3951 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2729402 chr18 28139710 Intergenic 6 1978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2542726 chr18 28141502 Intergenic 7 186 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2955851 chr18 28141115 Intergenic 7 573 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2847409 chr18 28141994 Intergenic 7 306 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2847410 chr18 28141879 Intergenic 7 191 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1382398 chr18 28140829 Intergenic 7 859 CEU:1.0;1.0, CHB:1.0;0.842, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7236477 chr18 28902322 Intergenic 7 ASSOCIATION 20208534 Eosinophilic esophagitis (pediatric) 5.15490195999 DSG1 FUNCTIONAL_SNP rs11664218 chr18 28893881 Intergenic 5b 8441 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs41326652 chr18 28899031 Intergenic 7 3291 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2919989 chr18 28884849 Intergenic 7 17473 CEU:1.0;0.825 LEAD_SNP rs1941184 chr18 29038123 Intergenic 7 ASSOCIATION 19772629 Parkinson's disease (age of onset) 5.39794000867 DSG3 LEAD_SNP rs10438933 chr18 29273129 Intergenic 7 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 6.0 B4GALT6 - MCART2 LEAD_SNP rs1013696 chr18 31420010 Intergenic 5b ASSOCIATION 20360315 Response to antidepressants 5.39794000867 ASXL3 - NOL4 LEAD_SNP rs7239368 chr18 31645379 Intergenic 7 ASSOCIATION 19846067 Response to citalopram treatment 5.04575749056 NOL4 FUNCTIONAL_SNP rs11662116 chr18 31651789 Intergenic 7 6410 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11081842 chr18 31656361 Intergenic 7 10982 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.956 LEAD_SNP rs17651157 chr18 34107452 Intron 7 ASSOCIATION 20195266 Response to antipsychotic treatment 7.0 FHOD3 FUNCTIONAL_SNP rs12454451 chr18 34092327 Intron 4 15125 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4799421 chr18 34098851 Intron 5b 8601 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12458683 chr18 34091305 Intron 7 16147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12458276 chr18 34113242 Intron 7 5790 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12458763 chr18 34091618 Intron 7 15834 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4799420 chr18 34096521 Intron 7 10931 CEU:1.0;0.848, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4799915 chr18 34928639 Intron 5b ASSOCIATION 18521091 Response to iloperidone treatment (QT prolongation) 5.52287874528 CELF4 FUNCTIONAL_SNP rs3865392 chr18 34929464 Intron 7 825 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.939, YRI:1.0;0.957 LEAD_SNP rs2162440 chr18 35214006 Intergenic 7 ASSOCIATION 19359265 Telomere length 5.52287874528 CELF4 - RPL12P40 FUNCTIONAL_SNP rs2861297 chr18 35220038 Intergenic 2b 6032 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs11082016 chr18 35211543 Intergenic 3b 2463 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12373413 chr18 35240793 Intergenic 5a 26787 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs1365665 chr18 35222024 Intergenic 7 8018 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs1427045 chr18 35214592 Intergenic 7 586 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1346281 chr18 35238126 Intergenic 7 24120 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.897 FUNCTIONAL_SNP rs2861296 chr18 35215638 Intergenic 7 1632 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.864 LEAD_SNP rs8085804 chr18 40288293 Intergenic 6 ASSOCIATION 19734545 Cognitive performance 5.09691001301 PIK3C3 - RIT2 FUNCTIONAL_SNP rs9944914 chr18 40266471 Intergenic 6 21822 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.927, YRI:1.0;0.864 FUNCTIONAL_SNP rs8086379 chr18 40281222 Intergenic 6 7071 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.846 FUNCTIONAL_SNP rs8085433 chr18 40249522 Intergenic 6 38771 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.847 FUNCTIONAL_SNP rs3810037 chr18 40301641 Intergenic 7 13348 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2051334 chr18 40260235 Intergenic 7 28058 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.864 FUNCTIONAL_SNP rs1430917 chr18 40276477 Intergenic 7 11816 CEU:1.0;1.0, CHB:1.0;0.938, JPT:1.0;0.933, YRI:1.0;0.864 LEAD_SNP rs4130047 chr18 40678235 Intron 6 ASSOCIATION 21738487 Parkinson's disease 6.69897000434 RIT2 LEAD_SNP rs17664267 chr18 40808798 Intergenic 7 ASSOCIATION 18846501 Conduct disorder (interaction) 5.15490195999 RIT2 - SYT4 LEAD_SNP rs12457996 chr18 40872273 Intergenic 7 ASSOCIATION 21042317 Major depressive disorder 5.22184874962 SYT4 - IBTKP1 FUNCTIONAL_SNP rs1424397 chr18 40802758 Intergenic 5b 69515 CEU:1.0;0.945 FUNCTIONAL_SNP rs2113443 chr18 40804895 Intergenic 5b 67378 CEU:1.0;0.945 FUNCTIONAL_SNP rs4890446 chr18 40802597 Intergenic 5b 69676 CEU:0.944;0.891 FUNCTIONAL_SNP rs2037272 chr18 40803420 Intergenic 6 68853 CEU:0.944;0.891 FUNCTIONAL_SNP rs7234194 chr18 40827809 Intergenic 6 44464 CEU:0.944;0.891 FUNCTIONAL_SNP rs17720360 chr18 40797073 Intergenic 6 75200 CEU:1.0;0.945 FUNCTIONAL_SNP rs1401005 chr18 40830622 Intergenic 6 41651 CEU:0.944;0.891 FUNCTIONAL_SNP rs1991087 chr18 40846394 Intergenic 6 25879 CEU:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs9948240 chr18 40801106 Intergenic 6 71167 CEU:0.944;0.89 FUNCTIONAL_SNP rs12456420 chr18 40829860 Intergenic 6 42413 CEU:0.944;0.891 FUNCTIONAL_SNP rs10502808 chr18 40808652 Intergenic 6 63621 CEU:1.0;0.945 FUNCTIONAL_SNP rs1960961 chr18 40885899 Intergenic 7 13626 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17664267 chr18 40808798 Intergenic 7 63475 CEU:1.0;0.945 FUNCTIONAL_SNP rs4890252 chr18 40809128 Intergenic 7 63145 CEU:1.0;0.945 FUNCTIONAL_SNP rs2037273 chr18 40803388 Intergenic 7 68885 CEU:1.0;0.945 FUNCTIONAL_SNP rs879130 chr18 40903331 Intergenic 7 31058 CEU:1.0;0.89 FUNCTIONAL_SNP rs17664161 chr18 40807993 Intergenic 7 64280 CEU:1.0;0.945 FUNCTIONAL_SNP rs8096164 chr18 40876883 Intergenic 7 4610 CEU:1.0;1.0 FUNCTIONAL_SNP rs12454087 chr18 40834955 Intergenic 7 37318 CEU:1.0;0.945, YRI:1.0;0.735 FUNCTIONAL_SNP rs1401004 chr18 40822131 Intergenic 7 50142 CEU:1.0;0.945 FUNCTIONAL_SNP rs1401006 chr18 40834710 Intergenic 7 37563 CEU:1.0;0.945, YRI:1.0;0.736 FUNCTIONAL_SNP rs1442359 chr18 40898589 Intergenic 7 26316 CEU:1.0;1.0, YRI:1.0;0.607 FUNCTIONAL_SNP rs1364410 chr18 40897115 Intergenic 7 24842 CEU:1.0;1.0, YRI:1.0;0.607 FUNCTIONAL_SNP rs16977410 chr18 40808925 Intergenic 7 63348 CEU:0.944;0.891 FUNCTIONAL_SNP rs17664191 chr18 40808535 Intergenic 7 63738 CEU:1.0;0.945 FUNCTIONAL_SNP rs9955650 chr18 40831637 Intergenic 7 40636 CEU:0.944;0.891 FUNCTIONAL_SNP rs7235664 chr18 40805294 Intergenic 7 66979 CEU:1.0;0.945 FUNCTIONAL_SNP rs7236442 chr18 40805215 Intergenic 7 67058 CEU:1.0;0.945 FUNCTIONAL_SNP rs16977454 chr18 40862247 Intergenic 7 10026 CEU:1.0;1.0, YRI:1.0;0.735 FUNCTIONAL_SNP rs17664605 chr18 40826399 Intergenic 7 45874 CEU:1.0;0.942 FUNCTIONAL_SNP rs11874656 chr18 40813336 Intergenic 7 58937 CEU:0.944;0.891 FUNCTIONAL_SNP rs12456419 chr18 40831736 Intergenic 7 40537 CEU:1.0;0.945 FUNCTIONAL_SNP rs17720301 chr18 40795766 Intergenic 7 76507 CEU:1.0;0.945 FUNCTIONAL_SNP rs17663805 chr18 40794660 Intergenic 7 77613 CEU:1.0;0.945 FUNCTIONAL_SNP rs17664496 chr18 40822871 Intergenic 7 49402 CEU:1.0;0.945 FUNCTIONAL_SNP rs1914617 chr18 40827261 Intergenic 7 45012 CEU:0.944;0.891 LEAD_SNP rs991014 chr18 42439886 Intron 7 ASSOCIATION 21076409 Ventricular conduction 9.22184874962 SETBP1 FUNCTIONAL_SNP rs4890490 chr18 42437268 Intron 4 2618 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1126225 chr18 42424594 Intron 5b 15292 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10853525 chr18 42436652 Intron 6 3234 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1545723 chr18 42371070 Intron 6 68816 CEU:0.918;0.811, CHB:0.895;0.762, JPT:0.942;0.84 FUNCTIONAL_SNP rs12454763 chr18 42434615 Intron 7 5271 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2028653 chr18 42387068 Intron 7 52818 CEU:0.96;0.885, CHB:0.902;0.813, JPT:0.942;0.84, YRI:0.745;0.529 FUNCTIONAL_SNP rs4890489 chr18 42431244 Intron 7 8642 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2243803 chr18 42956672 Intergenic 6 ASSOCIATION 21102462 Menarche (age at onset) 6.52287874528 SETBP1 - SLC14A2 FUNCTIONAL_SNP rs9950394 chr18 42942103 Intergenic 5b 14569 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;0.905 FUNCTIONAL_SNP rs2255757 chr18 42958392 Intergenic 6 1720 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9945505 chr18 42935618 Intergenic 6 21054 CEU:1.0;0.885, CHB:1.0;0.893, JPT:1.0;0.905 FUNCTIONAL_SNP rs1462153 chr18 42957748 Intergenic 7 1076 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.905 FUNCTIONAL_SNP rs2247691 chr18 42945735 Intergenic 7 10937 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.743 FUNCTIONAL_SNP rs9957020 chr18 42944393 Intergenic 7 12279 CEU:1.0;0.891, CHB:1.0;1.0, JPT:1.0;0.905 FUNCTIONAL_SNP rs2247332 chr18 42948934 Intergenic 7 7738 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;0.904, YRI:1.0;0.556 FUNCTIONAL_SNP rs9966006 chr18 42952496 Intergenic 7 4176 CEU:1.0;0.817, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs17744199 chr18 42952384 Intergenic 7 4288 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.904 FUNCTIONAL_SNP rs2243787 chr18 42957047 Intergenic 7 375 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8091746 chr18 42954892 Intergenic 7 1780 CEU:1.0;0.851, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs7241614 chr18 42959007 Intergenic 7 2335 CEU:1.0;0.851, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs2255320 chr18 42959045 Intergenic 7 2373 CEU:1.0;0.857, CHB:1.0;0.841, JPT:1.0;1.0 FUNCTIONAL_SNP rs2253161 chr18 42959737 Intergenic 7 3065 CEU:1.0;0.962, CHB:1.0;1.0, JPT:0.895;0.8, YRI:1.0;1.0 LEAD_SNP rs10502868 chr18 43153949 Intergenic 7 ASSOCIATION 19260141 Biochemical measures 5.15490195999 SETBP1 - SLC14A2 LEAD_SNP rs4890568 chr18 43231622 Intron 5a ASSOCIATION 20139978 Hematological and biochemical traits 9.69897000434 SLC14A2 FUNCTIONAL_SNP rs1351901 chr18 43227393 Intron 6 4229 CEU:1.0;0.879, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7238308 chr18 43220846 Intron 7 10776 CEU:1.0;0.879, CHB:1.0;0.916, JPT:1.0;0.937, YRI:1.0;0.866 LEAD_SNP rs17674580 chr18 43309911 Intron 5b ASSOCIATION 21750109 Bladder cancer 10.096910013 SLC14A1 FUNCTIONAL_SNP rs9953451 chr18 43335693 Intergenic 4 25782 CEU:0.95;0.859, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs2282615 chr18 43328750 Intron 4 18839 CEU:0.951;0.862, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs9966818 chr18 43335899 Intergenic 5a 25988 CEU:0.95;0.859, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs8090267 chr18 43334805 Intergenic 5b 24894 CEU:0.948;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2282616 chr18 43328634 Intron 5b 18723 CEU:0.951;0.862, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs11874337 chr18 43335258 Intergenic 6 25347 CEU:0.95;0.859, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs493262 chr18 43323624 Intron 6 13713 CEU:0.949;0.858, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17142 chr18 43329310 Intron 6 19399 CEU:0.95;0.859, CHB:0.873;0.763, JPT:1.0;1.0 FUNCTIONAL_SNP rs1944336 chr18 43334326 Intergenic 7 24415 CEU:0.951;0.862, CHB:1.0;0.878, JPT:1.0;1.0 FUNCTIONAL_SNP rs493363 chr18 43317249 Intron 7 7338 CEU:0.951;0.862 FUNCTIONAL_SNP rs474270 chr18 43328295 Intron 7 18384 CEU:0.95;0.859, CHB:1.0;0.864, JPT:1.0;1.0 FUNCTIONAL_SNP rs692899 chr18 43316270 Intron 7 6359 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4890588 chr18 43327294 Intron 7 17383 CEU:0.951;0.862, CHB:1.0;0.878, JPT:1.0;1.0 LEAD_SNP rs2576037 chr18 44585420 Intron 7 ASSOCIATION 21173776 Personality dimensions 7.0 KATNAL2 FUNCTIONAL_SNP rs7233515 chr18 44585955 Coding 6 535 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2571031 chr18 44577063 Intron 2b 8357 CEU:0.917;0.809, CHB:1.0;0.955, JPT:1.0;0.953, YRI:1.0;0.73 FUNCTIONAL_SNP rs2571021 chr18 44583498 Intron 5b 1922 CEU:1.0;0.888, CHB:1.0;0.792, JPT:1.0;0.953, YRI:1.0;0.676 FUNCTIONAL_SNP rs2576036 chr18 44587102 Intron 6 1682 CEU:1.0;0.888, CHB:1.0;0.955, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6507719 chr18 44581310 Intron 6 4110 CEU:0.956;0.842, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.756 FUNCTIONAL_SNP rs2571034 chr18 44578565 Intron 6 6855 CEU:1.0;0.852, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2247021 chr18 44578794 Intron 6 6626 CEU:0.917;0.809, CHB:1.0;0.955, JPT:1.0;0.953, YRI:1.0;0.73 FUNCTIONAL_SNP rs2576035 chr18 44587654 Intron 7 2234 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2576038 chr18 44582200 Intron 7 3220 CEU:0.914;0.802, CHB:1.0;0.955, JPT:1.0;0.953, YRI:1.0;0.722 FUNCTIONAL_SNP rs8097455 chr18 44593122 Intron 7 7702 CEU:0.957;0.812, CHB:1.0;1.0, JPT:1.0;0.953, YRI:0.899;0.547 FUNCTIONAL_SNP rs2571020 chr18 44584189 Intron 7 1231 CEU:0.917;0.809, CHB:1.0;0.955, JPT:1.0;0.953, YRI:1.0;0.758 FUNCTIONAL_SNP rs2571030 chr18 44573854 Intron 7 11566 CEU:0.917;0.809, CHB:1.0;0.955, JPT:1.0;0.953, YRI:0.908;0.649 FUNCTIONAL_SNP rs2571032 chr18 44578250 Intron 7 7170 CEU:0.917;0.809, CHB:1.0;0.955, JPT:1.0;0.953, YRI:1.0;0.73 LEAD_SNP rs1398217 chr18 44752238 Intron 6 ASSOCIATION 21102462 Menarche (age at onset) 12.6989700043 SKOR2 FUNCTIONAL_SNP rs2668764 chr18 44790218 Intergenic 5b 37980 CEU:0.957;0.878, JPT:1.0;0.787 FUNCTIONAL_SNP rs2247777 chr18 44746739 Intron 5b 5499 CEU:0.96;0.855, CHB:1.0;0.726, JPT:1.0;0.582 FUNCTIONAL_SNP rs2247578 chr18 44745056 Intergenic 6 7182 CEU:1.0;0.887, CHB:1.0;0.71, JPT:1.0;0.602 FUNCTIONAL_SNP rs2684838 chr18 44748079 Intron 6 4159 CEU:1.0;0.923, CHB:1.0;0.675, JPT:1.0;0.602 FUNCTIONAL_SNP rs2137287 chr18 44751856 Intron 7 382 CEU:1.0;0.857, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.573 FUNCTIONAL_SNP rs2137288 chr18 44752041 Intron 7 197 CEU:1.0;0.849, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.642 FUNCTIONAL_SNP rs2137289 chr18 44752125 Intron 7 113 CEU:1.0;0.857 FUNCTIONAL_SNP rs2668778 chr18 44745185 Intergenic 7 7053 CEU:0.96;0.855, CHB:1.0;0.692, JPT:1.0;0.582 LEAD_SNP rs4939827 chr18 46453463 Intron 5b ASSOCIATION 18372901 Colorectal cancer 27.096910013 SMAD7 ASSOCIATION 18372905 Colorectal cancer 5.69897000434 SMAD7 ASSOCIATION 17934461 Colorectal cancer 12.0 SMAD7 LEAD_SNP rs8099594 chr18 46991160 Intergenic 3a ASSOCIATION 18391952 Height 6.52287874528 DYM - C18orf32 FUNCTIONAL_SNP rs1943675 chr18 46974826 Intron 3a 16334 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2156497 chr18 46976586 Intron 7 14574 CEU:1.0;0.883, CHB:1.0;1.0, JPT:1.0;0.81, YRI:1.0;0.963 LEAD_SNP rs7240405 chr18 47159090 Intergenic 5b ASSOCIATION 20031538 HDL cholesterol 9.30102999566 LIPG - ACAA2 FUNCTIONAL_SNP rs2187375 chr18 47172283 Intergenic 4 13193 CEU:1.0;0.932, JPT:1.0;0.646 FUNCTIONAL_SNP rs7239867 chr18 47164717 Intergenic 4 5627 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1943973 chr18 47179516 Intergenic 5b 20426 CEU:1.0;0.82, CHB:1.0;0.576 FUNCTIONAL_SNP rs4939883 chr18 47167214 Intergenic 5b 8124 CEU:1.0;1.0 FUNCTIONAL_SNP rs8086351 chr18 47171888 Intergenic 7 12798 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;0.757 FUNCTIONAL_SNP rs6507939 chr18 47176261 Intergenic 7 17171 CEU:1.0;0.82, CHB:1.0;0.602 FUNCTIONAL_SNP rs2156552 chr18 47181668 Intergenic 7 22578 CEU:1.0;0.941, CHB:1.0;0.576 FUNCTIONAL_SNP rs10438978 chr18 47158186 Intergenic 7 904 CEU:1.0;1.0 FUNCTIONAL_SNP rs7241918 chr18 47160953 Intergenic 7 1863 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.758 LEAD_SNP rs4939883 chr18 47167214 Intergenic 5b ASSOCIATION 19060911 Cholesterol, total 10.6989700043 LIPG - ACAA2 ASSOCIATION 19060911 HDL cholesterol 10.6989700043 LIPG - ACAA2 ASSOCIATION 19060906 HDL cholesterol 14.15490196 LIPG - ACAA2 LEAD_SNP rs2156552 chr18 47181668 Intergenic 7 ASSOCIATION 20864672 HDL cholesterol 11.6989700043 LIPG - ACAA2 ASSOCIATION 18193044 HDL cholesterol 6.69897000434 LIPG - ACAA2 ASSOCIATION 18193043 HDL cholesterol 11.2218487496 LIPG - ACAA2 FUNCTIONAL_SNP rs7239867 chr18 47164717 Intergenic 4 16951 CEU:1.0;0.941, CHB:1.0;0.576 FUNCTIONAL_SNP rs2187375 chr18 47172283 Intergenic 4 9385 CEU:1.0;1.0 FUNCTIONAL_SNP rs4939883 chr18 47167214 Intergenic 5b 14454 CEU:1.0;0.941, CHB:1.0;0.723, JPT:1.0;0.626 FUNCTIONAL_SNP rs7240405 chr18 47159090 Intergenic 5b 22578 CEU:1.0;0.941, CHB:1.0;0.576 FUNCTIONAL_SNP rs8086351 chr18 47171888 Intergenic 7 9780 CEU:1.0;1.0, CHB:1.0;0.576, YRI:1.0;1.0 FUNCTIONAL_SNP rs10438978 chr18 47158186 Intergenic 7 23482 CEU:1.0;0.941, CHB:1.0;0.551 FUNCTIONAL_SNP rs7241918 chr18 47160953 Intergenic 7 20715 CEU:1.0;0.936, CHB:1.0;0.576 LEAD_SNP rs1036935 chr18 47843534 Intergenic 7 ASSOCIATION 20062064 Chronic lymphocytic leukemia 5.69897000434 CXXC1 - SKA1 FUNCTIONAL_SNP rs1373184 chr18 47841892 Intergenic 2b 1642 CEU:1.0;1.0, CHB:1.0;0.659, YRI:1.0;0.786 FUNCTIONAL_SNP rs3862689 chr18 47847254 Intergenic 2b 3720 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;0.741 FUNCTIONAL_SNP rs7504604 chr18 47847364 Intergenic 2b 3830 CEU:1.0;1.0 FUNCTIONAL_SNP rs12019102 chr18 47827943 Intergenic 5b 15591 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;0.741, YRI:1.0;0.88 FUNCTIONAL_SNP rs12967223 chr18 47827920 Intergenic 5b 15614 CEU:1.0;0.813, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4939626 chr18 47840555 Intergenic 6 2979 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1036934 chr18 47843566 Intergenic 7 32 CEU:1.0;1.0, CHB:1.0;0.659, YRI:1.0;0.813 FUNCTIONAL_SNP rs11877292 chr18 47849098 Intergenic 7 5564 CEU:1.0;0.813, CHB:1.0;0.659, JPT:1.0;0.741 FUNCTIONAL_SNP rs4939964 chr18 47843754 Intergenic 7 220 CEU:1.0;1.0, CHB:1.0;0.659, YRI:1.0;0.786 FUNCTIONAL_SNP rs7240776 chr18 47842348 Intergenic 7 1186 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12970172 chr18 47837796 Intergenic 7 5738 CEU:1.0;0.813, CHB:1.0;0.659, JPT:1.0;1.0 LEAD_SNP rs732528 chr18 48378234 Intergenic 6 ASSOCIATION 21116278 Entorhinal cortical thickness 5.15490195999 RPL17P46 - ME2 FUNCTIONAL_SNP rs2586761 chr18 48366458 Intergenic 2b 11776 CEU:1.0;0.938, JPT:1.0;0.846 FUNCTIONAL_SNP rs7238284 chr18 48373876 Intergenic 2b 4358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.875;0.765 FUNCTIONAL_SNP rs2847577 chr18 48364819 Intergenic 4 13415 CEU:1.0;0.938, JPT:1.0;0.846 FUNCTIONAL_SNP rs2586759 chr18 48379064 Intergenic 5a 830 CEU:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs2586765 chr18 48369584 Intergenic 5b 8650 CEU:1.0;1.0, JPT:1.0;0.729 FUNCTIONAL_SNP rs2847566 chr18 48383016 Intergenic 5b 4782 CEU:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs7227870 chr18 48366082 Intergenic 6 12152 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs16952611 chr18 48382668 Intergenic 7 4434 CEU:1.0;1.0, CHB:1.0;0.79, JPT:1.0;0.823, YRI:1.0;0.881 FUNCTIONAL_SNP rs1807019 chr18 48378106 Intergenic 7 128 CEU:1.0;1.0, JPT:1.0;0.846 FUNCTIONAL_SNP rs8093534 chr18 48368020 Intergenic 7 10214 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.844;0.713 FUNCTIONAL_SNP rs2665566 chr18 48382814 Intergenic 7 4580 CEU:1.0;1.0, JPT:1.0;0.846 LEAD_SNP rs768048 chr18 50285398 Intron 6 ASSOCIATION 21529783 Alcoholism (alcohol use disorder factor score) 5.09691001301 DCC FUNCTIONAL_SNP rs17469012 chr18 50296458 Intron 6 11060 CEU:1.0;0.917 FUNCTIONAL_SNP rs17469081 chr18 50298045 Intron 7 12647 CEU:1.0;0.917 FUNCTIONAL_SNP rs17469109 chr18 50298585 Intron 7 13187 CEU:1.0;0.917 FUNCTIONAL_SNP rs8083645 chr18 50293227 Intron 7 7829 CEU:1.0;0.917, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs1835716 chr18 50290571 Intron 7 5173 CEU:1.0;0.917, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10083941 chr18 50282122 Intron 7 3276 CEU:1.0;0.917 FUNCTIONAL_SNP rs17469158 chr18 50298624 Intron 7 13226 CEU:1.0;0.917 FUNCTIONAL_SNP rs8092051 chr18 50285912 Intron 7 514 CEU:0.916;0.839, JPT:1.0;0.74, YRI:1.0;1.0 FUNCTIONAL_SNP rs17469054 chr18 50297263 Intron 7 11865 CEU:1.0;0.917 FUNCTIONAL_SNP rs10084031 chr18 50280249 Intron 7 5149 CEU:1.0;0.917, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6508156 chr18 50272329 Intron 7 13069 CEU:1.0;0.917, YRI:0.91;0.731 FUNCTIONAL_SNP rs8083197 chr18 50292921 Intron 7 7523 CEU:1.0;0.917, YRI:1.0;1.0 FUNCTIONAL_SNP rs6508159 chr18 50288020 Intron 7 2622 CEU:1.0;0.917, JPT:1.0;0.659, YRI:1.0;1.0 LEAD_SNP rs1970671 chr18 52863108 Intergenic 6 ASSOCIATION 21441570 Diabetic retinopathy 5.52287874528 MAP1LC3P - TCF4 FUNCTIONAL_SNP rs12607567 chr18 52858659 Intergenic 7 4449 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 LEAD_SNP rs17594526 chr18 53058238 Intron 5b ASSOCIATION 19571811 Schizophrenia 7.0 TCF4 FUNCTIONAL_SNP rs1371832 chr18 53082236 Intron 4 23998 CEU:1.0;1.0 FUNCTIONAL_SNP rs17594665 chr18 53063719 Intron 5b 5481 CEU:1.0;1.0 FUNCTIONAL_SNP rs17509991 chr18 53067184 Intron 5b 8946 CEU:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs17510124 chr18 53068680 Intron 5b 10442 CEU:1.0;1.0 FUNCTIONAL_SNP rs7228846 chr18 53074618 Intron 5b 16380 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11152369 chr18 53066328 Intron 5b 8090 CEU:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs8089309 chr18 53075292 Intron 5b 17054 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9646596 chr18 53049212 Intron 6 9026 CEU:1.0;1.0, YRI:1.0;0.951 FUNCTIONAL_SNP rs17594721 chr18 53065892 Intron 7 7654 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8092679 chr18 53034140 Intron 7 24098 CEU:1.0;1.0 LEAD_SNP rs9960767 chr18 53155002 Intron 7 ASSOCIATION 19571808 Schizophrenia 8.39794000867 TCF4 FUNCTIONAL_SNP rs12327270 chr18 53168073 Intron 5b 13071 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.909 FUNCTIONAL_SNP rs10401120 chr18 53192498 Intron 7 37496 CEU:1.0;1.0 LEAD_SNP rs613872 chr18 53210302 Intron 7 ASSOCIATION 20825314 Fuchs's corneal dystrophy 18.0 TCF4 FUNCTIONAL_SNP rs784256 chr18 53398626 Intergenic 7 188324 CEU:0.928;0.804, CHB:1.0;1.0 FUNCTIONAL_SNP rs784257 chr18 53397199 Intergenic 7 186897 CEU:0.928;0.804, CHB:1.0;1.0 LEAD_SNP rs1978503 chr18 53664282 Intergenic 7 ASSOCIATION 17903305 Breast cancer 6.0 RPL21P126 - TXNL1 FUNCTIONAL_SNP rs17090021 chr18 53647447 Intergenic 7 16835 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.939 LEAD_SNP rs12604483 chr18 53855525 Exon,non-coding 5b ASSOCIATION 21160409 HIV-1 susceptibility 5.15490195999 RPL21P126 - TXNL1 FUNCTIONAL_SNP rs917711 chr18 53856288 Intron 5b 763 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1792724 chr18 53859497 Intergenic 6 3972 CEU:1.0;0.855, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;0.898 LEAD_SNP rs1557351 chr18 54752314 Intergenic 2b ASSOCIATION 19010793 Multiple sclerosis (age of onset) 5.39794000867 WDR7 - BOD1P FUNCTIONAL_SNP rs9963699 chr18 54753626 Intergenic 3a 1312 CEU:1.0;0.926, CHB:1.0;0.939, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12457489 chr18 54752212 Intergenic 4 102 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9957446 chr18 54751330 Intergenic 5b 984 CEU:1.0;1.0, CHB:1.0;0.826, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9954265 chr18 54751044 Intergenic 5b 1270 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.942 FUNCTIONAL_SNP rs1557352 chr18 54752528 Intergenic 5b 214 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs948652 chr18 54754947 Intergenic 6 2633 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs948651 chr18 54754936 Intergenic 7 2622 CEU:1.0;0.805, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.946 FUNCTIONAL_SNP rs2096951 chr18 54754614 Intergenic 7 2300 CEU:1.0;0.802, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9961401 chr18 54752979 Intergenic 7 665 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1120787 chr18 54983554 Intergenic 6 ASSOCIATION 20041166 HIV-1 control 5.15490195999 BOD1P - ST8SIA3 FUNCTIONAL_SNP rs478765 chr18 55013866 Intergenic 5b 30312 CEU:1.0;0.866, JPT:1.0;0.55 FUNCTIONAL_SNP rs641676 chr18 55013074 Intergenic 5b 29520 CEU:1.0;0.866 FUNCTIONAL_SNP rs1230706 chr18 55001827 Intergenic 5b 18273 CEU:1.0;0.866, JPT:1.0;0.55 FUNCTIONAL_SNP rs1230714 chr18 54989859 Intergenic 5b 6305 CEU:1.0;0.866, YRI:1.0;0.621 FUNCTIONAL_SNP rs1788828 chr18 55003293 Intergenic 5b 19739 CEU:1.0;0.866 FUNCTIONAL_SNP rs604169 chr18 55010028 Intergenic 6 26474 CEU:1.0;0.866 FUNCTIONAL_SNP rs7229590 chr18 54982392 Intergenic 6 1162 CEU:1.0;0.866, YRI:1.0;0.621 FUNCTIONAL_SNP rs7243174 chr18 54985134 Intergenic 6 1580 CEU:1.0;0.866, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.772 FUNCTIONAL_SNP rs7226850 chr18 54981956 Intergenic 6 1598 CEU:1.0;0.865, YRI:1.0;0.61 FUNCTIONAL_SNP rs625661 chr18 55014423 Intergenic 6 30869 CEU:1.0;0.866, JPT:1.0;0.55 FUNCTIONAL_SNP rs221860 chr18 55048228 Intergenic 7 64674 CEU:1.0;0.866 FUNCTIONAL_SNP rs7229738 chr18 54982475 Intergenic 7 1079 CEU:1.0;0.866, YRI:1.0;0.609 FUNCTIONAL_SNP rs170286 chr18 55067109 Intergenic 7 83555 CEU:1.0;0.866 FUNCTIONAL_SNP rs482622 chr18 55013419 Intergenic 7 29865 CEU:1.0;0.866, JPT:1.0;0.55 FUNCTIONAL_SNP rs1943406 chr18 54986641 Intergenic 7 3087 CEU:1.0;0.866, YRI:1.0;0.621 FUNCTIONAL_SNP rs1230704 chr18 55016718 Intergenic 7 33164 CEU:1.0;0.866, JPT:1.0;0.55 FUNCTIONAL_SNP rs1230712 chr18 54992532 Intergenic 7 8978 CEU:1.0;0.866 FUNCTIONAL_SNP rs509313 chr18 55012850 Intergenic 7 29296 CEU:1.0;0.866 FUNCTIONAL_SNP rs8099754 chr18 54988847 Intergenic 7 5293 CEU:1.0;0.866, YRI:1.0;0.621 FUNCTIONAL_SNP rs643006 chr18 55012766 Intergenic 7 29212 CEU:1.0;0.866, JPT:1.0;0.55 FUNCTIONAL_SNP rs7230403 chr18 54982204 Intergenic 7 1350 CEU:1.0;0.866 FUNCTIONAL_SNP rs512977 chr18 55011670 Intergenic 7 28116 CEU:1.0;0.866, JPT:1.0;0.55 LEAD_SNP rs7236632 chr18 55434202 Intron 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.22184874962 MRPS17P7 - RSL24D1P11 LEAD_SNP rs10503019 chr18 55454377 Intron 5b ASSOCIATION 19890347 Vitiligo 5.52287874528 MRPS17P7 - RSL24D1P11 LEAD_SNP rs8099014 chr18 56109859 Intergenic 6 ASSOCIATION 21507922 Platelet counts 5.22184874962 NEDD4L - ALPK2 FUNCTIONAL_SNP rs4245271 chr18 56114063 Intergenic 5b 4204 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4940697 chr18 56108485 Intergenic 5b 1374 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs7234602 chr18 56111593 Intergenic 5b 1734 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs17064977 chr18 56107697 Intergenic 5b 2162 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4940701 chr18 56110158 Intergenic 6 299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4245269 chr18 56110730 Intergenic 7 871 CEU:1.0;0.856, CHB:1.0;0.927, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs4940698 chr18 56108914 Intergenic 7 945 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4464160 chr18 56111830 Intergenic 7 1971 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs11152073 chr18 56108266 Intergenic 7 1593 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.858 LEAD_SNP rs8093763 chr18 57503378 Intergenic 4 ASSOCIATION 21106707 Bleomycin sensitivity 7.52287874528 GLUD1P4 - PMAIP1 LEAD_SNP rs12957347 chr18 57751014 Intergenic 6 ASSOCIATION 20694148 Metabolic syndrome 5.15490195999 SDCCAG3L - RPS3AP49 LEAD_SNP rs571312 chr18 57839769 Intergenic 6 ASSOCIATION 20935630 Body mass index 41.2218487496 RPS3AP49 - MC4R FUNCTIONAL_SNP rs12970134 chr18 57884750 Intergenic 5b 44981 CEU:0.95;0.82, CHB:0.902;0.813, JPT:0.824;0.582 FUNCTIONAL_SNP rs1457489 chr18 57861961 Intergenic 5b 22192 CEU:0.95;0.82, CHB:0.893;0.612, JPT:1.0;0.673 FUNCTIONAL_SNP rs523288 chr18 57848369 Intergenic 6 8600 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.927 FUNCTIONAL_SNP rs12967135 chr18 57849023 Intergenic 6 9254 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12969709 chr18 57859563 Intergenic 6 19794 CEU:0.95;0.82, CHB:0.902;0.813, JPT:0.925;0.856 FUNCTIONAL_SNP rs8089364 chr18 57858829 Intergenic 6 19060 CEU:0.95;0.82, CHB:0.902;0.813, JPT:0.925;0.856 FUNCTIONAL_SNP rs1539952 chr18 57766512 Intergenic 6 73257 CEU:0.903;0.815, CHB:1.0;0.911, JPT:0.838;0.651 FUNCTIONAL_SNP rs2168711 chr18 57848531 Intergenic 6 8762 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs11663816 chr18 57876227 Intergenic 6 36458 CEU:0.95;0.82, CHB:0.896;0.67, JPT:0.753;0.525 FUNCTIONAL_SNP rs10871777 chr18 57851763 Intergenic 6 11994 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs11664883 chr18 57877800 Intergenic 6 38031 CEU:0.95;0.82, CHB:0.896;0.67, JPT:0.753;0.525 FUNCTIONAL_SNP rs538656 chr18 57850422 Intergenic 7 10653 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.927, YRI:1.0;0.507 FUNCTIONAL_SNP rs17782313 chr18 57851097 Intergenic 7 11328 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs663129 chr18 57838401 Intergenic 7 1368 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.881 FUNCTIONAL_SNP rs17175643 chr18 57896742 Intergenic 7 56973 CEU:0.95;0.82, CHB:0.893;0.612, JPT:0.753;0.525 FUNCTIONAL_SNP rs953442 chr18 57797485 Intergenic 7 42284 CEU:0.903;0.815, CHB:0.902;0.813, JPT:0.913;0.715 FUNCTIONAL_SNP rs476828 chr18 57852587 Intergenic 7 12818 CEU:1.0;1.0, CHB:1.0;0.768, JPT:1.0;0.673 FUNCTIONAL_SNP rs6567160 chr18 57829135 Intergenic 7 10634 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17700144 chr18 57811982 Intergenic 7 27787 CEU:1.0;0.817 FUNCTIONAL_SNP rs11152213 chr18 57852948 Intergenic 7 13179 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs8083289 chr18 57893618 Intergenic 7 53849 CEU:0.95;0.82, CHB:0.899;0.736, JPT:0.824;0.582 FUNCTIONAL_SNP rs11665563 chr18 57876034 Intergenic 7 36265 CEU:0.95;0.82, CHB:0.896;0.67, JPT:0.753;0.525 FUNCTIONAL_SNP rs12954782 chr18 57864092 Intergenic 7 24323 CEU:0.944;0.844, CHB:0.895;0.668, JPT:0.923;0.793 LEAD_SNP rs17782313 chr18 57851097 Intergenic 7 ASSOCIATION 19151714 Obesity 14.3010299957 RPS3AP49 - MC4R ASSOCIATION 19079261 Body mass index 17.3010299957 RPS3AP49 - MC4R ASSOCIATION 18454148 Body mass index 14.5228787453 RPS3AP49 - MC4R FUNCTIONAL_SNP rs12967135 chr18 57849023 Intergenic 6 2074 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs2168711 chr18 57848531 Intergenic 6 2566 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.961 FUNCTIONAL_SNP rs10871777 chr18 57851763 Intergenic 6 666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.925 LEAD_SNP rs10871777 chr18 57851763 Intergenic 6 ASSOCIATION 20421936 Obesity (extreme) 10.2218487496 RPS3AP49 - MC4R FUNCTIONAL_SNP rs12970134 chr18 57884750 Intergenic 5b 32987 CEU:0.95;0.82, CHB:0.902;0.813, JPT:0.911;0.662 FUNCTIONAL_SNP rs1457489 chr18 57861961 Intergenic 5b 10198 CEU:0.95;0.82, CHB:0.893;0.612, JPT:1.0;0.723 FUNCTIONAL_SNP rs523288 chr18 57848369 Intergenic 6 3394 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.852;0.511 FUNCTIONAL_SNP rs12967135 chr18 57849023 Intergenic 6 2740 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.872 FUNCTIONAL_SNP rs12969709 chr18 57859563 Intergenic 6 7800 CEU:0.95;0.82, CHB:0.902;0.813, JPT:1.0;0.93 FUNCTIONAL_SNP rs8089364 chr18 57858829 Intergenic 6 7066 CEU:0.95;0.82, CHB:0.902;0.813, JPT:1.0;0.93 FUNCTIONAL_SNP rs1539952 chr18 57766512 Intergenic 6 85251 CEU:0.903;0.815, CHB:1.0;0.911, JPT:0.918;0.727 FUNCTIONAL_SNP rs2168711 chr18 57848531 Intergenic 6 3232 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.889 FUNCTIONAL_SNP rs571312 chr18 57839769 Intergenic 6 11994 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs11663816 chr18 57876227 Intergenic 6 24464 CEU:0.95;0.82, CHB:0.896;0.67, JPT:0.833;0.599 FUNCTIONAL_SNP rs11664883 chr18 57877800 Intergenic 6 26037 CEU:0.95;0.82, CHB:0.896;0.67, JPT:0.833;0.599 FUNCTIONAL_SNP rs538656 chr18 57850422 Intergenic 7 1341 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.625 FUNCTIONAL_SNP rs17782313 chr18 57851097 Intergenic 7 666 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.925 FUNCTIONAL_SNP rs663129 chr18 57838401 Intergenic 7 13362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs17175643 chr18 57896742 Intergenic 7 44979 CEU:0.95;0.82, CHB:0.893;0.612, JPT:0.833;0.599 FUNCTIONAL_SNP rs953442 chr18 57797485 Intergenic 7 54278 CEU:0.903;0.815, CHB:0.902;0.813, JPT:0.911;0.662 FUNCTIONAL_SNP rs476828 chr18 57852587 Intergenic 7 824 CEU:1.0;1.0, CHB:1.0;0.768, JPT:1.0;0.723, YRI:1.0;0.588 FUNCTIONAL_SNP rs6567160 chr18 57829135 Intergenic 7 22628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93 FUNCTIONAL_SNP rs17700144 chr18 57811982 Intergenic 7 39781 CEU:1.0;0.817 FUNCTIONAL_SNP rs11152213 chr18 57852948 Intergenic 7 1185 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.852 FUNCTIONAL_SNP rs8083289 chr18 57893618 Intergenic 7 41855 CEU:0.95;0.82, CHB:0.899;0.736, JPT:0.911;0.662 FUNCTIONAL_SNP rs11665563 chr18 57876034 Intergenic 7 24271 CEU:0.95;0.82, CHB:0.896;0.67, JPT:0.833;0.599 FUNCTIONAL_SNP rs12954782 chr18 57864092 Intergenic 7 12329 CEU:0.944;0.844, CHB:0.895;0.668, JPT:0.928;0.862 LEAD_SNP rs489693 chr18 57882787 Intergenic 5b ASSOCIATION 19557197 Waist circumference 6.39794000867 RPS3AP49 - MC4R FUNCTIONAL_SNP rs646749 chr18 57883125 Intergenic 5a 338 CEU:1.0;0.812, CHB:1.0;0.924, JPT:1.0;1.0 FUNCTIONAL_SNP rs581401 chr18 57885964 Intergenic 6 3177 CEU:1.0;0.826, CHB:1.0;0.932, JPT:1.0;1.0 FUNCTIONAL_SNP rs619825 chr18 57859066 Intergenic 6 23721 CEU:1.0;0.816, CHB:1.0;0.924, JPT:0.939;0.79 FUNCTIONAL_SNP rs623584 chr18 57898199 Intergenic 6 15412 CEU:1.0;0.826, CHB:1.0;0.765, JPT:1.0;0.949 FUNCTIONAL_SNP rs619662 chr18 57884551 Intergenic 7 1764 CEU:1.0;0.816, CHB:1.0;0.924, JPT:1.0;1.0 FUNCTIONAL_SNP rs670593 chr18 57869190 Intergenic 7 13597 CEU:1.0;0.826, CHB:1.0;0.815, JPT:0.942;0.762 FUNCTIONAL_SNP rs558522 chr18 57861449 Intergenic 7 21338 CEU:1.0;0.826, CHB:1.0;0.932, JPT:0.944;0.804 LEAD_SNP rs12970134 chr18 57884750 Intergenic 5b ASSOCIATION 19079260 Body mass index 12.0 RPS3AP49 - MC4R ASSOCIATION 19079260 Weight 12.3010299957 RPS3AP49 - MC4R ASSOCIATION 18454146 Waist circumference and related phenotypes 8.69897000434 RPS3AP49 - MC4R FUNCTIONAL_SNP rs1457489 chr18 57861961 Intergenic 5b 22789 CEU:1.0;1.0, CHB:1.0;0.768 FUNCTIONAL_SNP rs523288 chr18 57848369 Intergenic 6 36381 CEU:0.949;0.819, CHB:0.893;0.798, JPT:0.913;0.713 FUNCTIONAL_SNP rs12960928 chr18 57897803 Intergenic 6 13053 CEU:1.0;0.955, CHB:1.0;0.768, JPT:1.0;0.924, YRI:1.0;0.937 FUNCTIONAL_SNP rs12967135 chr18 57849023 Intergenic 6 35727 CEU:0.946;0.809, CHB:0.893;0.798, JPT:0.894;0.663 FUNCTIONAL_SNP rs12969709 chr18 57859563 Intergenic 6 25187 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.914;0.715 FUNCTIONAL_SNP rs8089364 chr18 57858829 Intergenic 6 25921 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.914;0.715 FUNCTIONAL_SNP rs2168711 chr18 57848531 Intergenic 6 36219 CEU:0.948;0.816, CHB:0.902;0.813, JPT:0.911;0.662 FUNCTIONAL_SNP rs921971 chr18 57861663 Intergenic 6 23087 CEU:1.0;0.955, CHB:1.0;1.0, JPT:0.914;0.715 FUNCTIONAL_SNP rs571312 chr18 57839769 Intergenic 6 44981 CEU:0.95;0.82, CHB:0.902;0.813, JPT:0.824;0.582 FUNCTIONAL_SNP rs11663816 chr18 57876227 Intergenic 6 8523 CEU:1.0;1.0, CHB:1.0;0.834, JPT:1.0;0.924, YRI:1.0;0.568 FUNCTIONAL_SNP rs12955983 chr18 57872989 Intergenic 6 11761 CEU:1.0;0.949, CHB:1.0;0.909, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs10871777 chr18 57851763 Intergenic 6 32987 CEU:0.95;0.82, CHB:0.902;0.813, JPT:0.911;0.662 FUNCTIONAL_SNP rs11664883 chr18 57877800 Intergenic 6 6950 CEU:1.0;1.0, CHB:1.0;0.834, JPT:1.0;0.924, YRI:1.0;0.568 FUNCTIONAL_SNP rs538656 chr18 57850422 Intergenic 7 34328 CEU:0.95;0.82, CHB:0.884;0.782, JPT:0.913;0.713 FUNCTIONAL_SNP rs17782313 chr18 57851097 Intergenic 7 33653 CEU:0.95;0.82, CHB:0.902;0.813, JPT:0.911;0.662 FUNCTIONAL_SNP rs663129 chr18 57838401 Intergenic 7 46349 CEU:0.95;0.82, CHB:0.902;0.813, JPT:0.824;0.582 FUNCTIONAL_SNP rs17175643 chr18 57896742 Intergenic 7 11992 CEU:1.0;1.0, CHB:1.0;0.768, JPT:1.0;0.924, YRI:1.0;1.0 FUNCTIONAL_SNP rs476828 chr18 57852587 Intergenic 7 32163 CEU:0.95;0.82, CHB:0.893;0.612 FUNCTIONAL_SNP rs8084515 chr18 57872449 Intergenic 7 12301 CEU:1.0;0.8, CHB:1.0;0.768, JPT:1.0;0.652 FUNCTIONAL_SNP rs6567160 chr18 57829135 Intergenic 7 55615 CEU:0.95;0.82, CHB:0.902;0.813, JPT:0.824;0.582 FUNCTIONAL_SNP rs9947403 chr18 57869750 Intergenic 7 15000 CEU:1.0;0.8, CHB:1.0;0.768, JPT:1.0;0.744 FUNCTIONAL_SNP rs11152213 chr18 57852948 Intergenic 7 31802 CEU:0.95;0.82, CHB:0.894;0.799, JPT:0.911;0.662 FUNCTIONAL_SNP rs8083289 chr18 57893618 Intergenic 7 8868 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;0.568 FUNCTIONAL_SNP rs12964203 chr18 57903604 Intergenic 7 18854 CEU:1.0;0.954, CHB:1.0;0.753, JPT:1.0;0.924, YRI:1.0;0.568 FUNCTIONAL_SNP rs2219375 chr18 57898549 Intergenic 7 13799 CEU:1.0;0.8, CHB:1.0;0.613, JPT:1.0;0.613 FUNCTIONAL_SNP rs2168708 chr18 57907311 Intergenic 7 22561 CEU:1.0;0.955, CHB:1.0;0.768, JPT:1.0;0.924, YRI:1.0;0.568 FUNCTIONAL_SNP rs12966550 chr18 57911330 Intergenic 7 26580 CEU:1.0;0.954, CHB:1.0;0.735, JPT:1.0;0.923, YRI:1.0;0.544 FUNCTIONAL_SNP rs590215 chr18 57904088 Intergenic 7 19338 CEU:1.0;0.873, CHB:1.0;0.768, JPT:1.0;0.924 FUNCTIONAL_SNP rs492443 chr18 57858802 Intergenic 7 25948 CEU:1.0;0.913, CHB:1.0;0.834 FUNCTIONAL_SNP rs11665563 chr18 57876034 Intergenic 7 8716 CEU:1.0;1.0, CHB:1.0;0.834, JPT:1.0;0.924, YRI:1.0;0.568 FUNCTIONAL_SNP rs12954782 chr18 57864092 Intergenic 7 20658 CEU:1.0;1.0, CHB:1.0;0.833, JPT:0.911;0.662 LEAD_SNP rs11878133 chr18 58067037 Intergenic 7 ASSOCIATION 20385819 Age-related macular degeneration 5.39794000867 MC4R - MRPS5P4 FUNCTIONAL_SNP rs17066891 chr18 58070932 Intergenic 6 3895 CEU:1.0;1.0 FUNCTIONAL_SNP rs9953038 chr18 58044663 Intergenic 6 22374 CEU:1.0;1.0, YRI:0.887;0.642 FUNCTIONAL_SNP rs9950112 chr18 58074297 Intergenic 7 7260 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17066881 chr18 58065483 Intergenic 7 1554 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17066865 chr18 58053195 Intergenic 7 13842 CEU:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs11874159 chr18 58066937 Intergenic 7 100 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9945521 chr18 58077144 Intergenic 7 10107 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17066836 chr18 58034591 Intergenic 7 32446 CEU:1.0;1.0, YRI:1.0;0.728 FUNCTIONAL_SNP rs9956342 chr18 58085645 Intergenic 7 18608 CEU:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs11875096 chr18 58058923 Intergenic 7 8114 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17066877 chr18 58061451 Intergenic 7 5586 CEU:1.0;1.0 LEAD_SNP rs4257308 chr18 58109190 Intergenic 7 ASSOCIATION 20694014 Tuberculosis 5.22184874962 MC4R - MRPS5P4 LEAD_SNP rs884205 chr18 60054857 Exon,non-coding 5b ASSOCIATION 19801982 Bone mineral density (spine) 8.04575749056 TNFRSF11A - RPL17P44 LEAD_SNP rs2957128 chr18 60060735 Intergenic 5b ASSOCIATION 20436471 Paget's disease 10.6989700043 TNFRSF11A - RPL17P44 FUNCTIONAL_SNP rs1893509 chr18 60061124 Intergenic 5b 389 CEU:1.0;0.814, YRI:1.0;0.556 FUNCTIONAL_SNP rs2957124 chr18 60058229 Intergenic 5b 2506 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2957125 chr18 60058342 Intergenic 5b 2393 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.893 FUNCTIONAL_SNP rs2957135 chr18 60064462 Intergenic 5b 3727 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.96;0.887 FUNCTIONAL_SNP rs2957127 chr18 60059365 Intergenic 7 1370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3018362 chr18 60082093 Intergenic 4 ASSOCIATION 21623375 Paget's disease 20.096910013 TNFRSF11A - RPL17P44 ASSOCIATION 20436471 Paget's disease 12.3010299957 TNFRSF11A - RPL17P44 ASSOCIATION 18445777 Bone mineral density (hip) 6.0 TNFRSF11A - RPL17P44 FUNCTIONAL_SNP rs2957137 chr18 60066888 Intergenic 4 15205 CEU:0.957;0.878, CHB:0.768;0.589, JPT:0.871;0.587 FUNCTIONAL_SNP rs2957145 chr18 60076799 Intergenic 5b 5294 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.551 FUNCTIONAL_SNP rs3018354 chr18 60075352 Intergenic 6 6741 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;0.551 LEAD_SNP rs8083346 chr18 62998775 Intergenic 7 ASSOCIATION 21502573 D-dimer levels 5.22184874962 C18orf20 - CDH7 FUNCTIONAL_SNP rs7239377 chr18 63016954 Intergenic 5a 18179 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.754;0.507 FUNCTIONAL_SNP rs12966197 chr18 63017137 Intergenic 5a 18362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.862;0.583 FUNCTIONAL_SNP rs4941328 chr18 62988192 Intergenic 6 10583 CEU:1.0;0.958, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs17074710 chr18 63023024 Intergenic 6 24249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2032214 chr18 63006957 Intergenic 6 8182 CEU:1.0;0.952, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs8099599 chr18 62998956 Intergenic 6 181 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12968541 chr18 63022524 Intergenic 6 23749 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7237779 chr18 63002455 Intergenic 6 3680 CEU:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs12955819 chr18 63004426 Intergenic 6 5651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.754;0.507 FUNCTIONAL_SNP rs7238602 chr18 63016386 Intergenic 6 17611 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.862;0.583 FUNCTIONAL_SNP rs12958425 chr18 63012141 Intergenic 6 13366 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.755;0.508 FUNCTIONAL_SNP rs12970845 chr18 63026473 Intergenic 6 27698 CEU:0.953;0.909, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs7238571 chr18 63028891 Intergenic 6 30116 CEU:1.0;0.958, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs12959665 chr18 63027863 Intergenic 6 29088 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs12964499 chr18 63013007 Intergenic 6 14232 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.754;0.507 FUNCTIONAL_SNP rs1587963 chr18 63010011 Intergenic 6 11236 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:0.754;0.506 FUNCTIONAL_SNP rs7229413 chr18 62966130 Intergenic 6 32645 CEU:1.0;0.8, CHB:1.0;0.905, JPT:1.0;1.0 FUNCTIONAL_SNP rs753126 chr18 63011240 Intergenic 6 12465 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4941330 chr18 63023486 Intergenic 7 24711 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12966946 chr18 62990607 Intergenic 7 8168 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12961832 chr18 62990076 Intergenic 7 8699 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1605167 chr18 62987397 Intergenic 7 11378 CEU:1.0;0.912, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs12953661 chr18 63000473 Intergenic 7 1698 CEU:1.0;0.956, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12959369 chr18 63015183 Intergenic 7 16408 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.754;0.507 FUNCTIONAL_SNP rs725659 chr18 63005036 Intergenic 7 6261 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.754;0.507 FUNCTIONAL_SNP rs8093722 chr18 63003029 Intergenic 7 4254 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.68 FUNCTIONAL_SNP rs8094382 chr18 62972831 Intergenic 7 25944 CEU:1.0;0.862, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs12964025 chr18 63012692 Intergenic 7 13917 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.754;0.507 FUNCTIONAL_SNP rs12959475 chr18 63029531 Intergenic 7 30756 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs1944310 chr18 63000035 Intergenic 7 1260 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs1944311 chr18 62997555 Intergenic 7 1220 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs1944312 chr18 62995662 Intergenic 7 3113 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7234810 chr18 63030063 Intergenic 7 31288 CEU:1.0;0.958, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs7243532 chr18 63023055 Intergenic 7 24280 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.786;0.509 FUNCTIONAL_SNP rs8098072 chr18 62973815 Intergenic 7 24960 CEU:1.0;0.812, CHB:1.0;0.944, JPT:1.0;1.0 FUNCTIONAL_SNP rs7239967 chr18 63025746 Intergenic 7 26971 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2135332 chr18 63021985 Intergenic 7 23210 CEU:1.0;0.828, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11151196 chr18 63009594 Intergenic 7 10819 CEU:0.951;0.904 FUNCTIONAL_SNP rs4940644 chr18 63025087 Intergenic 7 26312 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;1.0 FUNCTIONAL_SNP rs7229797 chr18 62974723 Intergenic 7 24052 CEU:1.0;0.8, CHB:1.0;0.905, JPT:1.0;1.0 FUNCTIONAL_SNP rs12959594 chr18 63002087 Intergenic 7 3312 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs12963183 chr18 63021264 Intergenic 7 22489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2212731 chr18 62997867 Intergenic 7 908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs12970925 chr18 63026322 Intergenic 7 27547 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs10503099 chr18 62972265 Intergenic 7 26510 CEU:1.0;0.8, CHB:1.0;0.905, JPT:1.0;1.0 FUNCTIONAL_SNP rs7229891 chr18 62974627 Intergenic 7 24148 CEU:1.0;0.8, CHB:1.0;0.905, JPT:1.0;1.0 FUNCTIONAL_SNP rs9646588 chr18 62990567 Intergenic 7 8208 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs470490 chr18 63031236 Intergenic 7 ASSOCIATION 21041692 Atrioventricular conduction 5.30102999566 C18orf20 - CDH7 LEAD_SNP rs2124349 chr18 65017100 Intergenic 6 ASSOCIATION 19734545 Cognitive performance 5.39794000867 RPL31P9 - DSEL LEAD_SNP rs17077540 chr18 65285279 Intron 7 ASSOCIATION 20125088 Major depressive disorder 6.69897000434 DSEL - FAM32D LEAD_SNP rs13353224 chr18 65400425 Intron 2b ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.04575749056 FAM32D - TMX3 LEAD_SNP rs17184557 chr18 67142857 Intron 6 ASSOCIATION 20548944 Osteoporosis 6.04575749056 DOK6 FUNCTIONAL_SNP rs2053520 chr18 67144892 Intron 6 2035 CEU:1.0;1.0, CHB:1.0;0.864, JPT:1.0;0.888 FUNCTIONAL_SNP rs2119961 chr18 67145169 Intron 6 2312 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs17765268 chr18 67139082 Intron 6 3775 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs17184396 chr18 67140642 Intron 7 2215 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs1036837 chr18 67150897 Intron 7 8040 CEU:1.0;0.945, CHB:1.0;0.864, JPT:1.0;0.888 FUNCTIONAL_SNP rs17185211 chr18 67148381 Intron 7 5524 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs17184466 chr18 67141162 Intron 7 1695 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.612 FUNCTIONAL_SNP rs17184789 chr18 67144712 Intron 7 1855 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.825 LEAD_SNP rs763361 chr18 67531642 Coding 7 ASSOCIATION 17554260 Type 1 diabetes 8.0 CD226 FUNCTIONAL_SNP rs1790576 chr18 67518843 Intergenic 5b 12799 CEU:1.0;1.0, CHB:1.0;0.866, JPT:1.0;0.944, YRI:1.0;0.893 FUNCTIONAL_SNP rs1790947 chr18 67527760 Intergenic 6 3882 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1615504 chr18 67526644 Intergenic 7 4998 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1790961 chr18 67525286 Intergenic 7 6356 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1790963 chr18 67519204 Intergenic 7 12438 CEU:1.0;0.961, CHB:0.945;0.847, JPT:1.0;0.861, YRI:0.953;0.868 LEAD_SNP rs8092443 chr18 68142414 Intron 6 ASSOCIATION 20195266 Response to antipsychotic treatment 6.0 RPS2P6 - CBLN2 FUNCTIONAL_SNP rs9944770 chr18 68140829 Intron 5a 1585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.923;0.792 FUNCTIONAL_SNP rs8092963 chr18 68142921 Intron 5b 507 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs12607670 chr18 68151931 Intron 5b 9517 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs4891861 chr18 68161037 Intron 5b 18623 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11875350 chr18 68156865 Intron 6 14451 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12956725 chr18 68162181 Intron 6 19767 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4891859 chr18 68160313 Intron 6 17899 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11151588 chr18 68150695 Intron 6 8281 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs4243323 chr18 68160798 Intron 6 18384 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2886658 chr18 68150355 Intron 7 7941 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs2886659 chr18 68154942 Intron 7 12528 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs2886660 chr18 68156482 Intron 7 14068 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs11664660 chr18 68160195 Intron 7 17781 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12607666 chr18 68151797 Intron 7 9383 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs2366384 chr18 68152963 Intron 7 10549 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs2366385 chr18 68155224 Intron 7 12810 CEU:1.0;0.815, CHB:1.0;1.0, JPT:1.0;0.79 FUNCTIONAL_SNP rs4597426 chr18 68158152 Intron 7 15738 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9949502 chr18 68160057 Intron 7 17643 CEU:0.905;0.819, CHB:1.0;0.528, JPT:1.0;0.79 FUNCTIONAL_SNP rs8093268 chr18 68158783 Intron 7 16369 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4243320 chr18 68160574 Intron 7 18160 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4891860 chr18 68160347 Intron 7 17933 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs11663206 chr18 68153620 Intron 6 ASSOCIATION 20195266 Response to antipsychotic treatment 5.69897000434 RPS2P6 - CBLN2 LEAD_SNP rs2660917 chr18 68628078 Intergenic 7 ASSOCIATION 19084217 Serum markers of iron status 5.09691001301 RPS2P6 - CBLN2 LEAD_SNP rs17083844 chr18 68842243 Intergenic 6 ASSOCIATION 18204098 Systemic lupus erythematosus 5.22184874962 RPS2P6 - CBLN2 FUNCTIONAL_SNP rs17083850 chr18 68848130 Intergenic 7 5887 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs17085106 chr18 69439073 Intergenic 7 ASSOCIATION 19656524 Nonsyndromic cleft lip with or without cleft palate 7.39794000867 RPS2P6 - CBLN2 LEAD_SNP rs337718 chr18 69774278 Intergenic 7 ASSOCIATION 19010793 Multiple sclerosis (severity) 5.04575749056 RPS2P6 - CBLN2 FUNCTIONAL_SNP rs2586144 chr18 69776112 Intergenic 6 1834 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs2586145 chr18 69776237 Intergenic 6 1959 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 LEAD_SNP rs1943816 chr18 71058622 Intergenic 7 ASSOCIATION 20932310 P-tau181p 7.0 NETO1 - FBXO15 LEAD_SNP rs4891159 chr18 74101941 Intron 4 ASSOCIATION 20834067 Longevity 6.0 ZNF516 LEAD_SNP rs2717128 chr18 74987632 Intergenic 6 ASSOCIATION 20031603 RR interval (heart rate) 6.0 GALR1 - BDP1P FUNCTIONAL_SNP rs2850849 chr18 74990162 Intergenic 7 2530 CEU:1.0;1.0, CHB:1.0;0.754, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2000841 chr18 74987007 Intergenic 7 625 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2002842 chr18 76409597 Intergenic 5b ASSOCIATION 18668548 Rheumatoid arthritis 5.22184874962 BDP1P - SALL3 LEAD_SNP rs4799088 chr18 77573548 Intergenic 5b ASSOCIATION 20801717 Amyotrophic lateral sclerosis 5.04575749056 CTDP1 - KCNG2 FUNCTIONAL_SNP rs6650631 chr18 77566535 Intergenic 5b 7013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.93 FUNCTIONAL_SNP rs11663602 chr18 77578191 Intergenic 5b 4643 CEU:0.949;0.901, CHB:1.0;0.868, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs7238071 chr18 77579812 Intergenic 5b 6264 CEU:1.0;0.951, CHB:1.0;0.868, JPT:1.0;0.953 LEAD_SNP rs2159128 chr19 950380 Intron 5b ASSOCIATION 20548946 Vertical cup-disc ratio 6.52287874528 ARID3A FUNCTIONAL_SNP rs349310 chr19 954678 Intron 4 4298 CEU:1.0;0.8 FUNCTIONAL_SNP rs349306 chr19 950694 Intron 5b 314 CEU:0.905;0.819 LEAD_SNP rs3764650 chr19 1046520 Intron 2a ASSOCIATION 21460840 Alzheimer's disease 16.3010299957 ABCA7 LEAD_SNP rs3752246 chr19 1056492 Coding 5b ASSOCIATION 21460841 Alzheimer's disease (late onset) 6.22184874962 ABCA7 LEAD_SNP rs7250872 chr19 1811603 Coding 4 ASSOCIATION 19416921 Bipolar disorder 5.69897000434 ATP8B3 LEAD_SNP rs3803915 chr19 2160529 Intergenic 5b ASSOCIATION 19851299 Body mass index 5.30102999566 AP3D1 - DOT1L FUNCTIONAL_SNP rs3746159 chr19 2210269 Intron 4 49740 CEU:1.0;1.0 FUNCTIONAL_SNP rs7251881 chr19 2169067 Intron 4 8538 CEU:1.0;0.899, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.651 FUNCTIONAL_SNP rs7256735 chr19 2169121 Intron 4 8592 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12986413 chr19 2170954 Intron 4 ASSOCIATION 18391950 Height 7.52287874528 DOT1L FUNCTIONAL_SNP rs1015670 chr19 2171490 Intron 2a 536 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs12459350 chr19 2176586 Intron 2b 5632 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs12983458 chr19 2168612 Intron 3a 2342 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.958 FUNCTIONAL_SNP rs2108524 chr19 2170764 Intron 4 190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs12982593 chr19 2175891 Intron 5b 4937 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs4807208 chr19 2170205 Intron 6 749 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs1074047 chr19 2158748 Intergenic 6 12206 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.963;0.928 LEAD_SNP rs11880198 chr19 3159769 Intron 5b ASSOCIATION 20445134 Heart failure 5.22184874962 GNA15 FUNCTIONAL_SNP rs11882112 chr19 3158801 Intron 6 968 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11669592 chr19 3318510 Intergenic 5b ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.39794000867 CELF5 - NFIC FUNCTIONAL_SNP rs10417519 chr19 3316412 Intergenic 4 2098 CEU:1.0;0.867, CHB:1.0;0.939, JPT:1.0;0.951 FUNCTIONAL_SNP rs10425416 chr19 3318254 Intergenic 5b 256 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.77 FUNCTIONAL_SNP rs11673680 chr19 3318912 Intergenic 7 402 CEU:0.916;0.839, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.745 LEAD_SNP rs7507204 chr19 3428834 Intron 2b ASSOCIATION 20881960 Height 15.3979400087 NFIC FUNCTIONAL_SNP rs11671513 chr19 3429937 Intron 2b 1103 CEU:1.0;1.0 FUNCTIONAL_SNP rs12982509 chr19 3412057 Intron 5b 16777 CEU:1.0;0.882 LEAD_SNP rs3760776 chr19 5839746 Intergenic 2b ASSOCIATION 21203500 N-glycan levels 12.0 FUT6 ASSOCIATION 21203500 N-glycan levels 9.04575749056 FUT6 ASSOCIATION 21203500 N-glycan levels 16.3979400087 FUT6 ASSOCIATION 21203500 N-glycan levels 11.5228787453 FUT6 FUNCTIONAL_SNP rs8101385 chr19 5838595 Exon,non-coding 5b 1151 CEU:1.0;1.0, YRI:1.0;0.865 LEAD_SNP rs11880706 chr19 6080482 Intron 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.69897000434 RFX2 FUNCTIONAL_SNP rs557318 chr19 6088087 Intron 2b 7605 CEU:1.0;1.0 FUNCTIONAL_SNP rs10408625 chr19 6076688 Intron 4 3794 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10401349 chr19 6075713 Intron 5b 4769 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10401351 chr19 6105807 Intron 5b 25325 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs543030 chr19 6081667 Intron 7 1185 CEU:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.542 FUNCTIONAL_SNP rs10405994 chr19 6097151 Intron 7 16669 CEU:1.0;1.0 FUNCTIONAL_SNP rs17271924 chr19 6097509 Intron 7 17027 CEU:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2230199 chr19 6718387 Coding 5b ASSOCIATION 21665990 Age-related macular degeneration 28.3010299957 C3 ASSOCIATION 20861866 Age-related macular degeneration 8.0 C3 ASSOCIATION 20385819 Age-related macular degeneration 10.0 C3 ASSOCIATION 20385826 Age-related macular degeneration 7.69897000434 C3 LEAD_SNP rs2115386 chr19 7196565 Intron 5b ASSOCIATION 21441570 Diabetic retinopathy 5.52287874528 INSR LEAD_SNP rs558718 chr19 7909883 Intron 5b ASSOCIATION 20205591 HIV-1 control 5.39794000867 EVI5L LEAD_SNP rs7258249 chr19 8271721 Intergenic 5b ASSOCIATION 19798445 Sphingolipid levels 26.6989700043 FBN3 - LASS4 FUNCTIONAL_SNP rs12610250 chr19 8277713 Intron 7 5992 CEU:0.959;0.849 LEAD_SNP rs2967605 chr19 8469738 Intergenic 4 ASSOCIATION 19060906 HDL cholesterol 8.0 RAB11B LEAD_SNP rs4072910 chr19 8644031 Intergenic 5b ASSOCIATION 20881960 Height 12.3979400087 MYO1F FUNCTIONAL_SNP rs4542783 chr19 8642160 Intron 4 1871 CEU:1.0;1.0, CHB:1.0;0.889, JPT:1.0;0.791 LEAD_SNP rs7249094 chr19 8672000 Intron 5b ASSOCIATION 18391951 Height 6.0 ADAMTS10 LEAD_SNP rs1862471 chr19 10000322 Intron 5b ASSOCIATION 21102462 Menarche (age at onset) 6.69897000434 OLFM2 FUNCTIONAL_SNP rs12610468 chr19 9989470 Intron 5b 10852 CEU:1.0;0.836, CHB:1.0;0.806, JPT:1.0;1.0 FUNCTIONAL_SNP rs12979274 chr19 10000925 Intron 6 603 CEU:0.954;0.87 FUNCTIONAL_SNP rs7245579 chr19 10000876 Intron 7 554 CEU:1.0;0.956, CHB:0.94;0.795, JPT:1.0;0.894 FUNCTIONAL_SNP rs12609594 chr19 9972417 Intron 7 27905 CEU:1.0;0.836, CHB:0.94;0.794, JPT:0.939;0.834, YRI:1.0;0.815 LEAD_SNP rs8109578 chr19 10213154 Intron 2b ASSOCIATION 18464913 Protein quantitative trait loci 6.39794000867 ANGPTL6 LEAD_SNP rs1799969 chr19 10394792 Coding 5a ASSOCIATION 21533024 Soluble ICAM-1 120.0 ICAM1 ASSOCIATION 18604267 Soluble ICAM-1 46.3979400087 ICAM1 LEAD_SNP rs5498 chr19 10395683 Coding 7 ASSOCIATION 21533024 Soluble ICAM-1 88.2218487496 ICAM1;ICAM4 ASSOCIATION 18604267 Soluble ICAM-1 24.3010299957 ICAM1;ICAM4 FUNCTIONAL_SNP rs2228615 chr19 10403368 Coding 2b 7685 CEU:0.956;0.841, JPT:0.815;0.545 FUNCTIONAL_SNP rs2569693 chr19 10399904 Intergenic 2b 4221 CEU:0.956;0.841, JPT:0.887;0.68 FUNCTIONAL_SNP rs3093030 chr19 10397403 Intergenic 4 1720 CEU:0.958;0.918, CHB:0.843;0.583, JPT:0.887;0.68 FUNCTIONAL_SNP rs2569702 chr19 10403947 Intron 4 8264 CEU:0.957;0.88, JPT:0.82;0.553 FUNCTIONAL_SNP rs2075741 chr19 10401098 Intron 4 5415 CEU:0.959;0.919, JPT:0.766;0.507 FUNCTIONAL_SNP rs885743 chr19 10406635 Intron 5b 10952 CEU:1.0;0.957, JPT:0.812;0.539 FUNCTIONAL_SNP rs892188 chr19 10409793 Intergenic 6 14110 CEU:0.957;0.88, JPT:0.82;0.553 FUNCTIONAL_SNP rs12150978 chr19 10408318 Intergenic 7 12635 CEU:0.959;0.919, JPT:0.82;0.553 LEAD_SNP rs281437 chr19 10397238 Exon,non-coding 4 ASSOCIATION 18604267 Soluble ICAM-1 9.52287874528 ICAM1;ICAM4 LEAD_SNP rs3093030 chr19 10397403 Intergenic 4 ASSOCIATION 20167578 Soluble levels of adhesion molecules 22.3979400087 ICAM1;ICAM4 FUNCTIONAL_SNP rs2228615 chr19 10403368 Coding 2b 5965 CEU:1.0;0.919, CHB:0.916;0.724, JPT:0.947;0.853 FUNCTIONAL_SNP rs5498 chr19 10395683 Coding 7 1720 CEU:0.958;0.918, CHB:0.843;0.583, JPT:0.887;0.68 FUNCTIONAL_SNP rs2569693 chr19 10399904 Intergenic 2b 2501 CEU:1.0;0.919, CHB:0.929;0.863, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2569702 chr19 10403947 Intron 4 6544 CEU:0.957;0.878, CHB:0.918;0.727, JPT:0.948;0.856, YRI:1.0;1.0 FUNCTIONAL_SNP rs2075741 chr19 10401098 Intron 4 3695 CEU:1.0;1.0, CHB:0.918;0.727, JPT:0.899;0.808 FUNCTIONAL_SNP rs885743 chr19 10406635 Intron 5b 9232 CEU:1.0;0.956, CHB:0.918;0.727, JPT:0.946;0.851 FUNCTIONAL_SNP rs892188 chr19 10409793 Intergenic 6 12390 CEU:0.957;0.878, CHB:0.918;0.727, JPT:0.948;0.856, YRI:1.0;1.0 FUNCTIONAL_SNP rs12150978 chr19 10408318 Intergenic 7 10915 CEU:1.0;1.0, CHB:0.918;0.727, JPT:0.948;0.856 LEAD_SNP rs12720356 chr19 10469975 Coding 5b ASSOCIATION 21102463 Crohn's disease 12.0 TYK2 ASSOCIATION 20953190 Psoriasis 10.3979400087 TYK2 LEAD_SNP rs280519 chr19 10472933 Intron 4 ASSOCIATION 20953190 Psoriasis 8.39794000867 TYK2 LEAD_SNP rs2304256 chr19 10475652 Coding 5b ASSOCIATION 19966805 Type 1 diabetes 8.39794000867 TYK2 LEAD_SNP rs11671653 chr19 10838486 Intron 5b ASSOCIATION 21347282 Coronary heart disease 6.04575749056 DNM2 FUNCTIONAL_SNP rs4334414 chr19 10831673 Intron 3a 6813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1560734 chr19 10841049 Intron 5a 2563 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1560706 chr19 10838004 Intron 5b 482 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8105939 chr19 10831801 Intron 6 6685 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11669133 chr19 11092139 Intron 4 ASSOCIATION 21347282 Coronary heart disease 8.0 SMARCA4 LEAD_SNP rs1122608 chr19 11163601 Intron 3a ASSOCIATION 21378990 Coronary heart disease 9.0 SMARCA4 ASSOCIATION 19198609 Myocardial infarction (early onset) 8.69897000434 SMARCA4 FUNCTIONAL_SNP rs7275 chr19 11170839 Coding 5b 7238 CEU:1.0;0.833, CHB:1.0;0.888, JPT:1.0;0.731 FUNCTIONAL_SNP rs10415811 chr19 11177408 Intergenic 5b 13807 CEU:1.0;0.833, CHB:1.0;0.888, JPT:1.0;0.731 FUNCTIONAL_SNP rs12609863 chr19 11167219 Intron 5b 3618 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12052058 chr19 11159525 Intron 5b 4076 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0 FUNCTIONAL_SNP rs6511718 chr19 11164781 Intron 5b 1180 CEU:1.0;0.83, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3786722 chr19 11161537 Intron 5b 2064 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3786727 chr19 11168029 Intron 5b 4428 CEU:1.0;0.829, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11670205 chr19 11171281 Intron 5b 7680 CEU:1.0;0.833, CHB:1.0;0.888, JPT:1.0;0.731 FUNCTIONAL_SNP rs8102273 chr19 11180047 Intergenic 7 16446 CEU:1.0;0.833, CHB:1.0;0.888, JPT:1.0;0.731 FUNCTIONAL_SNP rs12052201 chr19 11159096 Intron 7 4505 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0 LEAD_SNP rs11668477 chr19 11195030 Intergenic 5b ASSOCIATION 19060910 LDL cholesterol 6.69897000434 SMARCA4 - LDLR LEAD_SNP rs6511720 chr19 11202306 Intron 4 ASSOCIATION 19060906 LDL cholesterol 25.6989700043 LDLR ASSOCIATION 18193044 LDL cholesterol 50.6989700043 LDLR ASSOCIATION 18193043 LDL cholesterol 25.3979400087 LDLR LEAD_SNP rs2228671 chr19 11210912 Coding 4 ASSOCIATION 19060911 Cholesterol, total 23.0457574906 LDLR ASSOCIATION 19060911 LDL cholesterol 13.3979400087 LDLR LEAD_SNP rs2738459 chr19 11238473 Intron 7 ASSOCIATION 20864672 LDL cholesterol 5.15490195999 LDLR LEAD_SNP rs4804155 chr19 11334295 Intron 7 ASSOCIATION 21347282 Coronary heart disease 5.30102999566 DOCK6 LEAD_SNP rs7253363 chr19 11682495 Intergenic 7 ASSOCIATION 19010793 Multiple sclerosis (severity) 5.04575749056 ELOF1 - ACP5 LEAD_SNP rs3745672 chr19 12146370 Exon,non-coding 4 ASSOCIATION 20598377 Multiple sclerosis 6.0 ZNF433 FUNCTIONAL_SNP rs279171 chr19 12136704 Intron 5b 9666 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs10413462 chr19 12054636 Intron 5b 91734 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9989684 chr19 12102282 Intron 5b 44088 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs157185 chr19 12130477 Intron 6 15893 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs2547464 chr19 12085983 Intron 6 60387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10404882 chr19 12122834 Intron 6 23536 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.933;0.871 FUNCTIONAL_SNP rs10417749 chr19 12085436 Intron 6 60934 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs157182 chr19 12127776 Intron 6 18594 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs11880710 chr19 12156895 Intron 7 10525 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs1091350 chr19 12141527 Intron 7 4843 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs7248680 chr19 12165770 Intron 7 19400 CEU:1.0;1.0, CHB:1.0;0.659 FUNCTIONAL_SNP rs10084150 chr19 12093923 Intergenic 7 52447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7256759 chr19 12065010 Intron 7 81360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7258804 chr19 12091958 Intergenic 7 54412 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10403392 chr19 12153589 Intergenic 7 7219 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs8113226 chr19 12040385 Intron 7 105985 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10420683 chr19 12133769 Intron 7 12601 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs624976 chr19 12110238 Intron 7 36132 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs10417006 chr19 12157253 Intron 7 10883 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs279155 chr19 12115226 Intron 7 31144 CEU:1.0;1.0, CHB:1.0;0.659, JPT:1.0;1.0 FUNCTIONAL_SNP rs7255420 chr19 12157839 Intron 7 11469 CEU:1.0;1.0, CHB:1.0;0.659 LEAD_SNP rs17638629 chr19 12225372 Exon,non-coding 6 ASSOCIATION 20125193 Cognitive test performance 5.15490195999 ZNF788 LEAD_SNP rs7255045 chr19 12932269 Intergenic 7 ASSOCIATION 19862010 Mean corpuscular volume 11.6989700043 RNASEH2A - RTBDN FUNCTIONAL_SNP rs2290689 chr19 12958360 Intron 2b 26091 CEU:0.949;0.856, CHB:0.936;0.643 FUNCTIONAL_SNP rs4804737 chr19 12947938 Intergenic 5b 15669 CEU:0.947;0.853, CHB:0.934;0.639 FUNCTIONAL_SNP rs10424001 chr19 12948462 Intergenic 5b 16193 CEU:0.949;0.856, CHB:0.936;0.643 FUNCTIONAL_SNP rs10419408 chr19 12942750 Intron 5b 10481 CEU:1.0;0.95, CHB:0.893;0.757, JPT:0.845;0.681, YRI:1.0;0.512 FUNCTIONAL_SNP rs2242514 chr19 12982798 Intron 5b 50529 CEU:0.947;0.813, CHB:0.936;0.643 FUNCTIONAL_SNP rs10426080 chr19 12957850 Intron 5b 25581 CEU:0.949;0.818, CHB:0.936;0.62 FUNCTIONAL_SNP rs4804210 chr19 12989980 Intron 6 57711 CEU:0.948;0.814, CHB:0.936;0.643 FUNCTIONAL_SNP rs10404876 chr19 12987605 Intron 7 55336 CEU:0.946;0.809, CHB:0.938;0.683 FUNCTIONAL_SNP rs6511843 chr19 12955544 Intron 7 23275 CEU:0.949;0.856, CHB:0.936;0.643 LEAD_SNP rs11085824 chr19 13001547 Intergenic 4 ASSOCIATION 19862010 Mean corpuscular hemoglobin 11.0 GCDH FUNCTIONAL_SNP rs1060218 chr19 13008607 Coding 5b 7060 CEU:0.956;0.877, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9384 chr19 13010643 Exon,non-coding 5b 9096 CEU:1.0;0.919, CHB:1.0;0.92, JPT:1.0;0.877, YRI:1.0;0.523 FUNCTIONAL_SNP rs2974750 chr19 13044544 Exon,non-coding 4 42997 CEU:0.915;0.837, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs2965214 chr19 13029188 Intron 2b 27641 CEU:1.0;0.919, CHB:1.0;0.92, JPT:1.0;1.0 FUNCTIONAL_SNP rs11085825 chr19 13007458 Intron 4 5911 CEU:1.0;0.919, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8113575 chr19 13030280 Intergenic 4 28733 CEU:1.0;0.919, CHB:1.0;0.722, JPT:1.0;0.877 FUNCTIONAL_SNP rs1010222 chr19 13048608 Intergenic 4 47061 CEU:0.915;0.837, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs741702 chr19 13024250 Intron 5b 22703 CEU:1.0;0.919, CHB:1.0;0.92, JPT:1.0;1.0 FUNCTIONAL_SNP rs2293683 chr19 13039284 Intron 5b 37737 CEU:1.0;0.919, CHB:1.0;0.851, JPT:1.0;0.779 FUNCTIONAL_SNP rs8110787 chr19 12999458 Intergenic 6 2089 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs10451496 chr19 13017876 Intron 7 16329 CEU:1.0;0.919, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17706531 chr19 13015530 Intron 7 13983 CEU:1.0;0.919, CHB:1.0;0.92, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4528684 chr19 14351574 Intergenic 7 ASSOCIATION 20400778 Mortality among heart failure patients 6.0 LPHN1 - CD97 LEAD_SNP rs2108622 chr19 15990431 Coding 3a ASSOCIATION 21729881 Vitamin E levels 10.0 CYP4F2 ASSOCIATION 20833655 Warfarin maintenance dose 7.52287874528 CYP4F2 ASSOCIATION 19578179 Acenocoumarol maintenance dosage 9.52287874528 CYP4F2 ASSOCIATION 19300499 Warfarin maintenance dose 9.52287874528 CYP4F2 FUNCTIONAL_SNP rs12609820 chr19 15978057 Intron 6 12374 CEU:1.0;0.885, CHB:1.0;0.769, JPT:1.0;0.831 LEAD_SNP rs11666377 chr19 17118433 Intron 5b ASSOCIATION 19010793 Brain lesion load 5.15490195999 CPAMD8 LEAD_SNP rs8170 chr19 17389704 Coding 4 ASSOCIATION 20852631 Breast cancer 8.69897000434 C19orf62 ASSOCIATION 20852633 Ovarian cancer 5.39794000867 C19orf62 FUNCTIONAL_SNP rs35686037 chr19 17359535 Intergenic 2b 30169 CEU:1.0;0.826 FUNCTIONAL_SNP rs4808611 chr19 17354825 Intron 4 34879 CEU:1.0;0.826 FUNCTIONAL_SNP rs34084277 chr19 17387176 Intron 4 2528 CEU:1.0;0.882, YRI:1.0;1.0 FUNCTIONAL_SNP rs12982178 chr19 17371568 Intron 5b 18136 CEU:1.0;0.882, YRI:1.0;0.535 LEAD_SNP rs2363956 chr19 17394124 Coding 5b ASSOCIATION 20852633 Ovarian cancer 7.0 ANKLE1 FUNCTIONAL_SNP rs8100241 chr19 17392894 Coding 4 1230 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.594 FUNCTIONAL_SNP rs11668840 chr19 17399625 Intergenic 6 5501 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.903;0.527 LEAD_SNP rs11666579 chr19 17590281 Intron 5b ASSOCIATION 20360315 Response to antidepressants 5.52287874528 SLC27A1 FUNCTIONAL_SNP rs8109783 chr19 17588762 Intron 7 1519 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;0.586 LEAD_SNP rs12608932 chr19 17752689 Intron 7 ASSOCIATION 19734901 Amyotrophic lateral sclerosis 13.5228787453 UNC13A FUNCTIONAL_SNP rs4239633 chr19 17742469 Intron 7 10220 CEU:1.0;0.905 LEAD_SNP rs7248363 chr19 18467886 Intron 5a ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.0 PGPEP1 LEAD_SNP rs10423674 chr19 18817903 Intron 5b ASSOCIATION 21102462 Menarche (age at onset) 8.22184874962 CRTC1 FUNCTIONAL_SNP rs10221489 chr19 18826975 Intron 5b 9072 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1064395 chr19 19361735 Exon,non-coding 6 ASSOCIATION 21353194 Bipolar disorder 8.69897000434 NCAN FUNCTIONAL_SNP rs17751061 chr19 19413092 Coding 5b 51357 CEU:1.0;0.933 FUNCTIONAL_SNP rs11555053 chr19 19390185 Coding 5b 28450 CEU:1.0;1.0 FUNCTIONAL_SNP rs756997 chr19 19467085 Exon,non-coding 2b 105350 CEU:0.931;0.811 FUNCTIONAL_SNP rs2010506 chr19 19387356 Exon,non-coding 5b 25621 CEU:1.0;0.933 FUNCTIONAL_SNP rs17216041 chr19 19366643 Exon,non-coding 5b 4908 CEU:1.0;1.0 FUNCTIONAL_SNP rs4808934 chr19 19370917 Intron 4 9182 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.834 FUNCTIONAL_SNP rs8105642 chr19 19558468 Intron 4 196733 CEU:0.931;0.811 FUNCTIONAL_SNP rs2965201 chr19 19478051 Intergenic 4 116316 CEU:0.931;0.811 FUNCTIONAL_SNP rs2916070 chr19 19524105 Intron 4 162370 CEU:0.931;0.811 FUNCTIONAL_SNP rs6511027 chr19 19391851 Intron 5b 30116 CEU:1.0;1.0 FUNCTIONAL_SNP rs2965184 chr19 19545428 Intron 5b 183693 CEU:0.931;0.811 FUNCTIONAL_SNP rs998732 chr19 19378671 Intron 5b 16936 CEU:1.0;1.0 FUNCTIONAL_SNP rs4808933 chr19 19363812 Intergenic 6 2077 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2011503 chr19 19443986 Intron 6 82251 CEU:0.931;0.811 FUNCTIONAL_SNP rs10423874 chr19 19359500 Intron 7 2235 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10407933 chr19 19364319 Intergenic 7 2584 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.86 FUNCTIONAL_SNP rs10401714 chr19 19363630 Intergenic 7 1895 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2965195 chr19 19463032 Intron 7 101297 CEU:0.931;0.811 FUNCTIONAL_SNP rs8110171 chr19 19560063 Intron 7 198328 CEU:0.931;0.811 FUNCTIONAL_SNP rs2060274 chr19 19543271 Intron 7 181536 CEU:0.931;0.811 FUNCTIONAL_SNP rs2060275 chr19 19536208 Intron 7 174473 CEU:0.931;0.811 FUNCTIONAL_SNP rs4808951 chr19 19550306 Intron 7 188571 CEU:0.931;0.811 FUNCTIONAL_SNP rs8110250 chr19 19559989 Intron 7 198254 CEU:0.931;0.811 LEAD_SNP rs10401969 chr19 19407718 Intron 5b ASSOCIATION 20864672 LDL cholesterol 11.0 SUGP1 ASSOCIATION 19060906 LDL cholesterol 7.69897000434 SUGP1 FUNCTIONAL_SNP rs2228603 chr19 19329924 Coding 5b 77794 CEU:1.0;0.89 LEAD_SNP rs16996148 chr19 19658472 Intergenic 5b ASSOCIATION 18193044 LDL cholesterol 7.52287874528 CILP2 - PBX4 ASSOCIATION 18193044 Triglycerides 8.39794000867 CILP2 - PBX4 ASSOCIATION 18193043 LDL cholesterol 8.52287874528 CILP2 - PBX4 ASSOCIATION 18193043 Triglycerides 8.52287874528 CILP2 - PBX4 LEAD_SNP rs17216525 chr19 19662220 Intergenic 5b ASSOCIATION 19060906 Triglycerides 10.3979400087 CILP2 - PBX4 FUNCTIONAL_SNP rs17216588 chr19 19664077 Intergenic 5b 1857 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2304130 chr19 19789528 Intron 6 ASSOCIATION 20864672 Triglycerides 7.39794000867 ZNF101 ASSOCIATION 19060911 Cholesterol, total 14.6989700043 ZNF101 ASSOCIATION 19060911 LDL cholesterol 5.52287874528 ZNF101 ASSOCIATION 19060911 Triglycerides 5.52287874528 ZNF101 LEAD_SNP rs10411195 chr19 20036176 Intron 7 ASSOCIATION 19247474 Smoking behavior 5.22184874962 ZNF93 FUNCTIONAL_SNP rs2215914 chr19 20023643 Intron 5a 12533 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1303719 chr19 20017390 Intron 7 18786 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10414768 chr19 20055370 Intergenic 7 19194 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs2192619 chr19 20009528 Intergenic 7 26648 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2192622 chr19 20009739 Intergenic 7 26437 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 LEAD_SNP rs2562456 chr19 21666210 Intergenic 5b ASSOCIATION 19207018 Pain 9.69897000434 ZNF493 - ZNF429 FUNCTIONAL_SNP rs2650784 chr19 21666597 Intergenic 5b 387 CEU:0.945;0.893, CHB:1.0;0.91, JPT:1.0;0.943, YRI:1.0;1.0 LEAD_SNP rs1975174 chr19 22515251 Intergenic 7 ASSOCIATION 20421499 Telomere length 5.69897000434 ZNF676 - RPL34P34 FUNCTIONAL_SNP rs808373 chr19 22469233 Intergenic 4 46018 CEU:0.916;0.805, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10404998 chr19 22608374 Intergenic 5b 93123 CEU:1.0;0.922, CHB:0.807;0.526 FUNCTIONAL_SNP rs4024623 chr19 22568065 Intergenic 5b 52814 CEU:1.0;0.922, CHB:0.862;0.517, JPT:1.0;0.597 FUNCTIONAL_SNP rs10405295 chr19 22608556 Intergenic 5b 93305 CEU:1.0;0.921, CHB:0.803;0.521 FUNCTIONAL_SNP rs1976314 chr19 22608853 Intergenic 5b 93602 CEU:0.958;0.847, CHB:0.807;0.526 FUNCTIONAL_SNP rs1897613 chr19 22573575 Intergenic 6 58324 CEU:0.959;0.882, CHB:0.865;0.547, JPT:1.0;0.607 FUNCTIONAL_SNP rs1991830 chr19 22514730 Intergenic 6 521 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;0.824 FUNCTIONAL_SNP rs12610462 chr19 22551462 Intergenic 6 36211 CEU:1.0;0.922, CHB:0.865;0.547, JPT:0.927;0.61 FUNCTIONAL_SNP rs808372 chr19 22470368 Intron 6 44883 CEU:0.957;0.813, CHB:1.0;1.0, JPT:1.0;0.824 FUNCTIONAL_SNP rs12151261 chr19 22587929 Intron 6 72678 CEU:1.0;0.922, CHB:0.858;0.531, JPT:1.0;0.607 FUNCTIONAL_SNP rs7253315 chr19 22594439 Intron 6 79188 CEU:0.956;0.876, CHB:0.856;0.552, JPT:1.0;0.597 FUNCTIONAL_SNP rs11673228 chr19 22596084 Intron 6 80833 CEU:1.0;0.918, CHB:0.925;0.609, JPT:1.0;0.607 FUNCTIONAL_SNP rs2116919 chr19 22491706 Intron 6 23545 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;0.824 FUNCTIONAL_SNP rs11881957 chr19 22573251 Intergenic 6 58000 CEU:0.959;0.919, CHB:0.865;0.547, JPT:1.0;0.607 FUNCTIONAL_SNP rs10454118 chr19 22559605 Intergenic 6 44354 CEU:1.0;0.922, CHB:0.862;0.517, JPT:1.0;0.578 FUNCTIONAL_SNP rs1985135 chr19 22523578 Intergenic 6 8327 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;0.715 FUNCTIONAL_SNP rs1865075 chr19 22554854 Intergenic 6 39603 CEU:1.0;0.922, CHB:0.865;0.547, JPT:0.922;0.543 FUNCTIONAL_SNP rs6511350 chr19 22594697 Intron 6 79446 CEU:1.0;0.922, CHB:0.865;0.547, JPT:1.0;0.607 FUNCTIONAL_SNP rs11669254 chr19 22544805 Intergenic 6 29554 CEU:0.956;0.842, CHB:0.865;0.547 FUNCTIONAL_SNP rs8110854 chr19 22549453 Intergenic 7 34202 CEU:0.957;0.845, CHB:0.865;0.547, JPT:0.927;0.61 FUNCTIONAL_SNP rs1975175 chr19 22515239 Intergenic 7 12 CEU:1.0;0.881, CHB:1.0;1.0, JPT:1.0;0.824 FUNCTIONAL_SNP rs11668269 chr19 22513960 Intergenic 7 1291 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.683 FUNCTIONAL_SNP rs12459636 chr19 22542439 Intergenic 7 27188 CEU:1.0;0.922 FUNCTIONAL_SNP rs7255829 chr19 22537311 Intergenic 7 22060 CEU:1.0;0.918, CHB:0.861;0.537 FUNCTIONAL_SNP rs4932763 chr19 22603922 Intron 7 88671 CEU:0.959;0.882, CHB:0.865;0.547, JPT:1.0;0.607 FUNCTIONAL_SNP rs1808668 chr19 22518657 Intergenic 7 3406 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;0.769 FUNCTIONAL_SNP rs10409520 chr19 22512477 Intergenic 7 2774 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;0.824 FUNCTIONAL_SNP rs10418203 chr19 22567144 Intergenic 7 51893 CEU:0.959;0.882, CHB:0.862;0.517, JPT:1.0;0.578 FUNCTIONAL_SNP rs9304996 chr19 22486535 Intron 7 28716 CEU:1.0;0.853, CHB:1.0;1.0, JPT:1.0;0.824 FUNCTIONAL_SNP rs10402396 chr19 22601809 Intron 7 86558 CEU:0.955;0.874, CHB:0.923;0.632, JPT:1.0;0.619 FUNCTIONAL_SNP rs2360621 chr19 22548669 Intergenic 7 33418 CEU:0.916;0.805, CHB:0.864;0.57 FUNCTIONAL_SNP rs2082480 chr19 22538650 Intergenic 7 23399 CEU:1.0;0.913, CHB:0.859;0.511 FUNCTIONAL_SNP rs8111537 chr19 22535545 Intergenic 7 20294 CEU:1.0;0.922, CHB:0.865;0.547 FUNCTIONAL_SNP rs10420149 chr19 22582925 Intron 7 67674 CEU:0.917;0.808, CHB:0.869;0.58 FUNCTIONAL_SNP rs12608842 chr19 22548013 Intergenic 7 32762 CEU:1.0;0.922, CHB:0.865;0.547, JPT:1.0;0.647 FUNCTIONAL_SNP rs7259586 chr19 22537862 Intergenic 7 22611 CEU:1.0;0.922, CHB:0.865;0.547 FUNCTIONAL_SNP rs10420380 chr19 22600624 Intron 7 85373 CEU:1.0;0.913, CHB:0.82;0.507, JPT:1.0;0.517 FUNCTIONAL_SNP rs4932755 chr19 22494816 Intron 7 20435 CEU:1.0;0.883, CHB:1.0;1.0, JPT:0.931;0.763 FUNCTIONAL_SNP rs16999064 chr19 22552602 Intergenic 7 37351 CEU:1.0;0.922, CHB:0.865;0.547, JPT:0.927;0.61 FUNCTIONAL_SNP rs436971 chr19 22461218 Intergenic 7 54033 CEU:0.957;0.812, CHB:1.0;1.0, JPT:1.0;0.824 FUNCTIONAL_SNP rs7259376 chr19 22507705 Intergenic 7 7546 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.562 FUNCTIONAL_SNP rs1865074 chr19 22554949 Intergenic 7 39698 CEU:0.959;0.882, CHB:0.862;0.517, JPT:0.922;0.543 FUNCTIONAL_SNP rs6511348 chr19 22557374 Intergenic 7 42123 CEU:0.917;0.808, CHB:0.865;0.547 FUNCTIONAL_SNP rs11671804 chr19 22591216 Intron 7 75965 CEU:0.917;0.808, CHB:0.865;0.547 FUNCTIONAL_SNP rs10414591 chr19 22600122 Intron 7 84871 CEU:0.959;0.882, CHB:0.865;0.547, JPT:1.0;0.607 LEAD_SNP rs10403021 chr19 30079604 Intergenic 6 ASSOCIATION 21441570 Diabetic retinopathy 5.69897000434 VSTM2B - POP4 FUNCTIONAL_SNP rs10500240 chr19 30068492 Intergenic 2b 11112 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12609107 chr19 30068506 Intergenic 4 11098 CEU:1.0;0.857, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.679 FUNCTIONAL_SNP rs10421601 chr19 30078526 Intergenic 4 1078 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.686 FUNCTIONAL_SNP rs4805434 chr19 30070326 Intergenic 5a 9278 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs4503920 chr19 30078306 Intergenic 5a 1298 CEU:1.0;1.0, YRI:1.0;0.688 FUNCTIONAL_SNP rs4805432 chr19 30069721 Intergenic 5b 9883 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs10853819 chr19 30071274 Intergenic 5b 8330 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs10853820 chr19 30071287 Intergenic 5b 8317 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs10853818 chr19 30071263 Intergenic 5b 8341 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs10853816 chr19 30068177 Intergenic 5b 11427 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7249400 chr19 30070530 Intergenic 5b 9074 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs11667631 chr19 30077077 Intergenic 6 2527 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs6509494 chr19 30072420 Intergenic 6 7184 CEU:1.0;1.0, JPT:1.0;0.57 FUNCTIONAL_SNP rs10406970 chr19 30076221 Intergenic 6 3383 CEU:1.0;1.0, JPT:1.0;0.57, YRI:1.0;0.812 FUNCTIONAL_SNP rs10518279 chr19 30085145 Intergenic 7 5541 CEU:1.0;0.95, JPT:1.0;0.57, YRI:1.0;0.616 FUNCTIONAL_SNP rs10500241 chr19 30068893 Intergenic 7 10711 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs4805431 chr19 30069657 Intergenic 7 9947 CEU:1.0;0.861, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs6509495 chr19 30072690 Intergenic 7 6914 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs10853821 chr19 30071359 Intergenic 7 8245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs12459467 chr19 30076094 Intergenic 7 3510 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.682 FUNCTIONAL_SNP rs12973126 chr19 30079100 Intergenic 7 504 CEU:1.0;1.0, JPT:1.0;0.568 FUNCTIONAL_SNP rs4284747 chr19 30078252 Intergenic 7 1352 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.705 FUNCTIONAL_SNP rs11670734 chr19 30071031 Intergenic 7 8573 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.675 FUNCTIONAL_SNP rs7252718 chr19 30070787 Intergenic 7 8817 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.693 LEAD_SNP rs8102137 chr19 30296853 Intergenic 5b ASSOCIATION 20972438 Bladder cancer 10.6989700043 C19orf12 - CCNE1 FUNCTIONAL_SNP rs17513752 chr19 30290811 Intergenic 5b 6042 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.577 FUNCTIONAL_SNP rs3218036 chr19 30305684 Intron 5b 8831 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17513613 chr19 30286822 Intergenic 7 10031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.577 LEAD_SNP rs746961 chr19 31099890 Intergenic 7 ASSOCIATION 17903293 Select biomarker traits 6.09691001301 ZNF536 - DKFZp566F0947 FUNCTIONAL_SNP rs892098 chr19 31099589 Intergenic 6 301 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.961;0.89 FUNCTIONAL_SNP rs732877 chr19 31100225 Intergenic 7 335 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.963 LEAD_SNP rs1078373 chr19 31801130 Intron 6 ASSOCIATION 19734545 Cognitive performance 5.22184874962 TSHZ3 FUNCTIONAL_SNP rs8108157 chr19 31793336 Intron 6 7794 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.866, YRI:1.0;1.0 LEAD_SNP rs2111504 chr19 32917455 Intron 5b ASSOCIATION 19488044 Bipolar disorder 5.69897000434 DPY19L3 FUNCTIONAL_SNP rs7253039 chr19 32973077 Coding 7 55622 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs3746016 chr19 32877259 Exon,non-coding 5a 40196 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs1057395 chr19 32974738 Exon,non-coding 4 57283 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs10417152 chr19 32888900 Intron 2b 28555 CEU:1.0;1.0, CHB:1.0;0.915, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs10415145 chr19 32841053 Intron 4 76402 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;0.761 FUNCTIONAL_SNP rs10409835 chr19 32888660 Intron 5b 28795 CEU:1.0;1.0, CHB:1.0;0.915, JPT:1.0;1.0 FUNCTIONAL_SNP rs4805755 chr19 32854470 Intron 5b 62985 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;0.761 FUNCTIONAL_SNP rs4805758 chr19 32866424 Intron 5b 51031 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs4804992 chr19 32858791 Intron 6 58664 CEU:1.0;1.0, CHB:1.0;0.916, JPT:1.0;1.0, YRI:1.0;0.761 FUNCTIONAL_SNP rs4805762 chr19 32963954 Intron 6 46499 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.884 FUNCTIONAL_SNP rs10410770 chr19 32902404 Intron 6 15051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1861780 chr19 32863044 Intron 6 54411 CEU:1.0;1.0, CHB:1.0;0.91, JPT:1.0;1.0, YRI:1.0;0.666 FUNCTIONAL_SNP rs738093 chr19 32930507 Intron 6 13052 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2302772 chr19 32902050 Intron 6 15405 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs2903738 chr19 32946043 Intron 6 28588 CEU:1.0;0.933, CHB:1.0;0.518, JPT:1.0;0.509 FUNCTIONAL_SNP rs2012353 chr19 32899293 Intron 6 18162 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs737093 chr19 32977406 Intergenic 6 59951 CEU:1.0;1.0, CHB:1.0;0.915, JPT:1.0;0.887, YRI:1.0;0.892 FUNCTIONAL_SNP rs16967141 chr19 32971223 Intron 6 53768 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs10415744 chr19 32880580 Intergenic 7 36875 CEU:1.0;0.873, CHB:1.0;0.916, JPT:1.0;1.0 FUNCTIONAL_SNP rs16967057 chr19 32914078 Intron 7 3377 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7258196 chr19 32944565 Intron 7 27110 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.892 FUNCTIONAL_SNP rs7252443 chr19 32940733 Intron 7 23278 CEU:1.0;0.933, CHB:1.0;0.518, JPT:1.0;0.509 LEAD_SNP rs12460876 chr19 33356891 Intron 5b ASSOCIATION 20383146 Chronic kidney disease 14.5228787453 SLC7A9 FUNCTIONAL_SNP rs8101881 chr19 33364628 Intergenic 5b 7737 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0 LEAD_SNP rs8101881 chr19 33364628 Intergenic 5b ASSOCIATION 21572414 Urinary metabolites 26.2218487496 SLC7A9 - CCDC123 FUNCTIONAL_SNP rs12460876 chr19 33356891 Intron 5b 7737 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0 LEAD_SNP rs4805834 chr19 33453659 Intron 7 ASSOCIATION 20383145 Serum creatinine 10.3010299957 CCDC123 FUNCTIONAL_SNP rs17272274 chr19 33373040 Intron 4 80619 CEU:0.911;0.83, CHB:1.0;0.721, JPT:0.785;0.616 FUNCTIONAL_SNP rs11667378 chr19 33365591 Intergenic 5b 88068 CEU:0.905;0.819, CHB:1.0;0.722, JPT:0.819;0.671 FUNCTIONAL_SNP rs7253595 chr19 33407953 Intron 5b 45706 CEU:1.0;0.912, CHB:1.0;0.721, JPT:1.0;1.0 FUNCTIONAL_SNP rs7246178 chr19 33406442 Intron 5b 47217 CEU:1.0;0.912, CHB:1.0;0.721, JPT:1.0;1.0 FUNCTIONAL_SNP rs2016867 chr19 33410289 Intron 6 43370 CEU:0.911;0.83, CHB:1.0;0.719, JPT:1.0;1.0 FUNCTIONAL_SNP rs2082424 chr19 33398289 Intron 6 55370 CEU:1.0;0.912, CHB:1.0;0.721, JPT:1.0;1.0 FUNCTIONAL_SNP rs6510304 chr19 33396227 Intron 7 57432 CEU:1.0;0.848, CHB:1.0;0.679, JPT:1.0;1.0 LEAD_SNP rs10411210 chr19 33532300 Intron 2a ASSOCIATION 19011631 Colorectal cancer 8.30102999566 RHPN2 LEAD_SNP rs10500264 chr19 33750314 Intergenic 6 ASSOCIATION 19915574 Inflammatory bowel disease (early onset) 9.39794000867 SLC7A10 - CEBPA LEAD_SNP rs736289 chr19 33757062 Intergenic 5b ASSOCIATION 21102463 Crohn's disease 8.04575749056 SLC7A10 - CEBPA LEAD_SNP rs4805924 chr19 34168273 Intron 4 ASSOCIATION 21107309 Working memory 6.22184874962 CHST8 LEAD_SNP rs29941 chr19 34309532 Intergenic 5b ASSOCIATION 20935630 Body mass index 8.52287874528 KCTD15 - RPS4XP20 ASSOCIATION 19079260 Body mass index 11.15490196 KCTD15 - RPS4XP20 ASSOCIATION 19079260 Weight 8.30102999566 KCTD15 - RPS4XP20 FUNCTIONAL_SNP rs14810 chr19 34304903 Exon,non-coding 5b 4629 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs29938 chr19 34311481 Intergenic 2b 1949 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.685 FUNCTIONAL_SNP rs29937 chr19 34311948 Intergenic 2b 2416 CEU:1.0;0.808, CHB:1.0;0.529, JPT:0.913;0.537, YRI:1.0;0.865 FUNCTIONAL_SNP rs29944 chr19 34306898 Intergenic 4 2634 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.862;0.583 FUNCTIONAL_SNP rs29939 chr19 34310800 Intergenic 4 1268 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs29943 chr19 34308210 Intergenic 5b 1322 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.93, YRI:1.0;1.0 FUNCTIONAL_SNP rs29942 chr19 34309277 Intergenic 6 255 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.891 LEAD_SNP rs11084753 chr19 34322137 Intergenic 6 ASSOCIATION 19079261 Body mass index 7.69897000434 KCTD15 - RPS4XP20 FUNCTIONAL_SNP rs435942 chr19 34322097 Intergenic 6 40 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs368794 chr19 34320452 Intergenic 6 1685 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 LEAD_SNP rs10407640 chr19 34766588 Intron 7 ASSOCIATION 20215924 Functional MRI 5.15490195999 KIAA0355 LEAD_SNP rs16975963 chr19 38325536 Intron 6 ASSOCIATION 20834067 Longevity 6.0 ZNF573 - WDR87 LEAD_SNP rs8102476 chr19 38735613 Intergenic 6 ASSOCIATION 19767754 Prostate cancer 10.6989700043 DPF1 - PPP1R14A FUNCTIONAL_SNP rs7250689 chr19 38753625 Intergenic 4 18012 CEU:1.0;0.822, CHB:1.0;0.62, JPT:1.0;0.577, YRI:1.0;0.601 FUNCTIONAL_SNP rs12610267 chr19 38744733 Intron 4 9120 CEU:1.0;0.822, CHB:1.0;0.62, JPT:1.0;0.608, YRI:1.0;0.632 FUNCTIONAL_SNP rs12976534 chr19 38743962 Intron 4 8349 CEU:1.0;0.822, CHB:1.0;0.62, JPT:1.0;0.665, YRI:1.0;0.632 FUNCTIONAL_SNP rs11668070 chr19 38748913 Intergenic 6 13300 CEU:1.0;0.819, CHB:1.0;0.62, JPT:1.0;0.565 FUNCTIONAL_SNP rs8102454 chr19 38735480 Intergenic 6 133 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.88 LEAD_SNP rs892055 chr19 38912764 Coding 5b ASSOCIATION 21182207 Asperger disorder 5.30102999566 RASGRP4 LEAD_SNP rs472265 chr19 39580737 Intron 7 ASSOCIATION 21490949 Type 2 diabetes 5.04575749056 PAPL LEAD_SNP rs12979860 chr19 39738787 Intergenic 5b ASSOCIATION 19684573 Response to hepatitis C treatment 28.0 IL28B - IL28A LEAD_SNP rs8099917 chr19 39743165 Intergenic 4 ASSOCIATION 21228123 Response to hepatitis C treatment 20.0 IL28B - IL28A ASSOCIATION 20060832 Chronic Hepatitis C infection 8.22184874962 IL28B - IL28A ASSOCIATION 19749758 Response to hepatitis C treatment 8.04575749056 IL28B - IL28A ASSOCIATION 19749757 Response to hepatitis C treatment 31.5228787453 IL28B - IL28A FUNCTIONAL_SNP rs7248668 chr19 39743821 Intergenic 4 656 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs3733829 chr19 41310571 Intron 5b ASSOCIATION 20418890 Smoking behavior 8.0 EGLN2 FUNCTIONAL_SNP rs3736329 chr19 41313202 Intron 2b 2631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4802091 chr19 41315318 Intergenic 4 4747 CEU:1.0;0.959, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs2305797 chr19 41269076 Intron 5b 41495 CEU:0.957;0.842, CHB:1.0;0.667, JPT:0.946;0.81 FUNCTIONAL_SNP rs4803369 chr19 41315980 Intergenic 5b 5409 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0 FUNCTIONAL_SNP rs12151282 chr19 41298419 Intron 5b 12152 CEU:1.0;0.91, CHB:0.928;0.675, JPT:1.0;0.95 FUNCTIONAL_SNP rs7245595 chr19 41295859 Intron 7 14712 CEU:1.0;0.92, CHB:1.0;0.735, JPT:0.952;0.906 LEAD_SNP rs4105144 chr19 41358624 Intergenic 4 ASSOCIATION 20418888 Smoking behavior 11.6989700043 CYP2A6 - CYP2A7 FUNCTIONAL_SNP rs7251418 chr19 41341589 Intergenic 5b 17035 CEU:0.943;0.841 FUNCTIONAL_SNP rs4343391 chr19 41344368 Intergenic 5b 14256 CEU:1.0;0.856 FUNCTIONAL_SNP rs4001921 chr19 41363301 Intergenic 6 4677 CEU:1.0;0.895 FUNCTIONAL_SNP rs8105704 chr19 41363898 Intergenic 7 5274 CEU:1.0;0.895 FUNCTIONAL_SNP rs1496402 chr19 41366134 Intergenic 7 7510 CEU:1.0;0.951 FUNCTIONAL_SNP rs8102683 chr19 41363765 Intergenic 7 5141 CEU:1.0;0.894 LEAD_SNP rs7260329 chr19 41521638 Intron 7 ASSOCIATION 20418888 Smoking behavior 5.22184874962 CYP2B6 FUNCTIONAL_SNP rs3786552 chr19 41521757 Intron 7 119 CEU:1.0;0.867, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3786551 chr19 41521746 Intron 7 108 CEU:1.0;0.863, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs17318596 chr19 41937095 Coding 4 ASSOCIATION 20881960 Height 15.3010299957 ATP5SL FUNCTIONAL_SNP rs10853751 chr19 41903220 Coding 4 33875 CEU:1.0;0.808, CHB:1.0;1.0, JPT:1.0;0.908, YRI:1.0;0.762 LEAD_SNP rs4803480 chr19 42066279 Intron 5a ASSOCIATION 21682944 Schizophrenia 7.0 PLEKHA3P1 - CEACAM21 LEAD_SNP rs2191566 chr19 44511389 Intron 6 ASSOCIATION 19684603 Acute lymphoblastic leukemia (childhood) 6.39794000867 ZNF230 FUNCTIONAL_SNP rs7258517 chr19 44535999 Coding 6 24610 CEU:0.907;0.822, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs2356549 chr19 44511202 Exon,non-coding 6 187 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.745 FUNCTIONAL_SNP rs390369 chr19 44506984 Intergenic 2a 4405 CEU:1.0;1.0, CHB:0.948;0.899, JPT:1.0;1.0 FUNCTIONAL_SNP rs2270196 chr19 44506623 Intergenic 4 4766 CEU:1.0;1.0, CHB:0.948;0.899, JPT:1.0;1.0 FUNCTIONAL_SNP rs369106 chr19 44506930 Intergenic 4 4459 CEU:1.0;1.0, CHB:0.948;0.899, JPT:1.0;1.0 FUNCTIONAL_SNP rs8105571 chr19 44510341 Intron 4 1048 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7256908 chr19 44528898 Intergenic 5a 17509 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6509133 chr19 44522913 Intergenic 6 11524 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7245749 chr19 44513932 Intron 7 2543 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1996408 chr19 44532732 Intron 7 21343 CEU:0.907;0.822, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs4803667 chr19 44533604 Intron 7 22215 CEU:0.907;0.822, CHB:1.0;0.948, JPT:1.0;1.0 FUNCTIONAL_SNP rs367209 chr19 44506249 Intergenic 7 5140 CEU:1.0;1.0, CHB:0.948;0.899, JPT:1.0;1.0 FUNCTIONAL_SNP rs12232810 chr19 44525122 Intergenic 7 13733 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7255315 chr19 44510933 Intron 7 456 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2061333 chr19 44614208 Intergenic 6 ASSOCIATION 19118814 Alzheimer's disease 5.69897000434 ZNF224 - ZNF225 LEAD_SNP rs1434579 chr19 44932972 Coding 7 ASSOCIATION 20694014 Tuberculosis 5.39794000867 ZNF229 LEAD_SNP rs644148 chr19 44970935 Intergenic 7 ASSOCIATION 18957941 Personality dimensions 5.09691001301 ZNF285B ASSOCIATION 18957941 Personality dimensions 6.04575749056 ZNF285B FUNCTIONAL_SNP rs613876 chr19 44968788 Intergenic 7 2147 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.826 LEAD_SNP rs6859 chr19 45382034 Exon,non-coding 4 ASSOCIATION 20885792 Alzheimer's disease (late onset) 7.0 PVRL2 ASSOCIATION 18823527 Alzheimer's disease 13.2218487496 PVRL2 LEAD_SNP rs157580 chr19 45395266 Intron 5b ASSOCIATION 21627779 Alzheimer's disease 88.096910013 TOMM40 ASSOCIATION 21123754 Alzheimer's disease biomarkers 6.0 TOMM40 ASSOCIATION 19125160 Alzheimer's disease 40.0 TOMM40 ASSOCIATION 19060911 HDL cholesterol 6.39794000867 TOMM40 ASSOCIATION 19060911 LDL cholesterol 18.6989700043 TOMM40 ASSOCIATION 19060910 LDL cholesterol 7.30102999566 TOMM40 LEAD_SNP rs2075650 chr19 45395619 Intron 5b ASSOCIATION 21123754 Alzheimer's disease biomarkers 6.0 TOMM40 ASSOCIATION 20932310 AB1-42 6.52287874528 TOMM40 ASSOCIATION 20885792 Alzheimer's disease (late onset) 35.3010299957 TOMM40 ASSOCIATION 20595579 Longevity 11.096910013 TOMM40 ASSOCIATION 20460622 Alzheimer's disease 295.0 TOMM40 ASSOCIATION 20100581 Brain imaging 0 - ASSOCIATION term=200 Alzheimer's disease 10.5228787453 TOMM40 ASSOCIATION 19734902 Alzheimer's disease 156.698970004 TOMM40 ASSOCIATION 19734903 Alzheimer's disease 15.6989700043 TOMM40 ASSOCIATION 19060911 Cholesterol, total 18.5228787453 TOMM40 ASSOCIATION 18439552 C-reactive protein 7.0 TOMM40 FUNCTIONAL_SNP rs6857 chr19 45392254 Exon,non-coding 7 3365 CEU:1.0;0.862, CHB:1.0;1.0, JPT:1.0;0.897 LEAD_SNP rs769449 chr19 45410002 Intron 4 ASSOCIATION 18439548 C-reactive protein 20.0457574906 APOE LEAD_SNP rs429358 chr19 45411941 Coding 5b ASSOCIATION 21123754 Alzheimer's disease biomarkers 6.0 APOE ASSOCIATION 20100581 Brain imaging 0 - LEAD_SNP rs439401 chr19 45414451 Intergenic 2b ASSOCIATION 21386085 HDL Cholesterol - Triglycerides (HDLC-TG) 8.0 LOC100129500 ASSOCIATION 21123754 Alzheimer's disease biomarkers 6.0 LOC100129500 ASSOCIATION 19060911 Triglycerides 8.69897000434 LOC100129500 FUNCTIONAL_SNP rs584007 chr19 45416478 Intergenic 5b 2027 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 LEAD_SNP rs445925 chr19 45415640 Intergenic 7 ASSOCIATION 20838585 Cardiovascular disease risk factors 18.0457574906 LOC100129500 LEAD_SNP rs4420638 chr19 45422946 Intergenic 7 ASSOCIATION 21740922 Longevity 15.6989700043 APOC1 ASSOCIATION 21300955 C-reactive protein 138.045757491 APOC1 ASSOCIATION 21196492 C-reactive protein 6.52287874528 APOC1 ASSOCIATION 20864672 LDL cholesterol 39.6989700043 APOC1 ASSOCIATION 20442857 Lipoprotein-associated phospholipase A2 activity and mass 23.2218487496 APOC1 ASSOCIATION 19567438 C-reactive protein 26.3010299957 APOC1 ASSOCIATION 19197348 Quantitative traits 5.30102999566 APOC1 ASSOCIATION 19197348 Quantitative traits 6.52287874528 APOC1 ASSOCIATION 19197348 Quantitative traits 5.69897000434 APOC1 ASSOCIATION 19060906 LDL cholesterol 26.3979400087 APOC1 ASSOCIATION 18802019 LDL cholesterol 6.69897000434 APOC1 ASSOCIATION 18262040 LDL cholesterol 20.0 APOC1 ASSOCIATION 18193044 LDL cholesterol 60.0 APOC1 ASSOCIATION 18193043 LDL cholesterol 42.5228787453 APOC1 ASSOCIATION 17998437 Alzheimer's disease 43.6989700043 APOC1 ASSOCIATION 17975299 Alzheimer's disease 39.0 APOC1 ASSOCIATION 17463246 Triglycerides 12.5228787453 APOC1 ASSOCIATION 17474819 Alzheimer's disease (late onset) 39.0 APOC1 LEAD_SNP rs2159324 chr19 45695738 Intergenic 5b ASSOCIATION 19197348 Quantitative traits 6.39794000867 TRAPPC6A - EXOC3L2 ASSOCIATION 19197348 Quantitative traits 5.69897000434 TRAPPC6A - EXOC3L2 LEAD_SNP rs10423928 chr19 46182304 Intron 5b ASSOCIATION 20081857 Two-hour glucose challenge 11.5228787453 GIPR FUNCTIONAL_SNP rs1800437 chr19 46181392 Coding 4 912 CEU:1.0;0.926, CHB:1.0;1.0, JPT:1.0;0.929, YRI:1.0;0.665 FUNCTIONAL_SNP rs11672660 chr19 46180184 Intron 4 2120 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.925, YRI:1.0;0.609 LEAD_SNP rs2287019 chr19 46202172 Intron 6 ASSOCIATION 20935630 Body mass index 15.6989700043 QPCTL LEAD_SNP rs8111071 chr19 46307406 Intron 5a ASSOCIATION 21658281 Sudden cardiac arrest 5.39794000867 RSPH6A FUNCTIONAL_SNP rs12982642 chr19 46264963 Coding 5b 42443 CEU:1.0;1.0 LEAD_SNP rs11083846 chr19 47207654 Intron 5b ASSOCIATION 18758461 Chronic lymphocytic leukemia 8.39794000867 PRKD2 LEAD_SNP rs425105 chr19 47208481 Intron 5b ASSOCIATION 19430480 Type 1 diabetes 10.5228787453 PRKD2 LEAD_SNP rs11668878 chr19 47268373 Intergenic 4 ASSOCIATION 20062064 Chronic lymphocytic leukemia 6.39794000867 FKRP - SLC1A5 LEAD_SNP rs3810291 chr19 47569003 Exon,non-coding 5b ASSOCIATION 20935630 Body mass index 11.6989700043 ZC3H4 FUNCTIONAL_SNP rs7250850 chr19 47585517 Coding 5a 16514 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;0.882, YRI:1.0;0.784 FUNCTIONAL_SNP rs12609406 chr19 47611128 Intron 3a 42125 CEU:1.0;0.874, CHB:1.0;0.933, JPT:1.0;0.882, YRI:1.0;0.784 FUNCTIONAL_SNP rs2303108 chr19 47589895 Intron 4 20892 CEU:1.0;0.874, CHB:1.0;1.0, JPT:0.935;0.821 FUNCTIONAL_SNP rs8101149 chr19 47600441 Intron 4 31438 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;0.882, YRI:1.0;0.784 FUNCTIONAL_SNP rs3745619 chr19 47584699 Intron 5a 15696 CEU:1.0;0.874, CHB:1.0;1.0, JPT:0.935;0.821 FUNCTIONAL_SNP rs2303107 chr19 47587772 Intron 5b 18769 CEU:1.0;0.874, CHB:1.0;0.933, JPT:1.0;0.938, YRI:1.0;0.784 FUNCTIONAL_SNP rs7248181 chr19 47588202 Intron 5b 19199 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;0.882, YRI:1.0;0.784 FUNCTIONAL_SNP rs4804023 chr19 47579613 Intron 5b 10610 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;0.882, YRI:1.0;0.784 FUNCTIONAL_SNP rs10408163 chr19 47597102 Intron 5b 28099 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;0.882, YRI:1.0;0.784 FUNCTIONAL_SNP rs7251104 chr19 47585698 Intron 6 16695 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;0.882 LEAD_SNP rs2637125 chr19 48401893 Intergenic 5b ASSOCIATION 21533175 Serum dehydroepiandrosterone sulphate levels 18.5228787453 SULT2A1 - SNAR-A12 FUNCTIONAL_SNP rs182421 chr19 48403483 Intergenic 6 1590 CEU:1.0;0.889, CHB:1.0;1.0 FUNCTIONAL_SNP rs1017993 chr19 48404176 Intergenic 7 2283 CEU:1.0;0.89, CHB:1.0;1.0 FUNCTIONAL_SNP rs2972619 chr19 48406374 Intergenic 7 4481 CEU:1.0;0.889, CHB:1.0;1.0 LEAD_SNP rs492602 chr19 49206417 Coding 5b ASSOCIATION 18776911 Plasma level of vitamin B12 16.3010299957 FUT2 LEAD_SNP rs602662 chr19 49206985 Coding 5a ASSOCIATION 19303062 Folate pathway vitamin levels 19.5228787453 FUT2 LEAD_SNP rs504963 chr19 49208865 Exon,non-coding 5b ASSOCIATION 20570966 Crohn's disease 7.69897000434 FUT2 FUNCTIONAL_SNP rs602662 chr19 49206985 Coding 5a 1880 CEU:1.0;0.922, CHB:1.0;1.0, YRI:0.805;0.625 FUNCTIONAL_SNP rs492602 chr19 49206417 Coding 5b 2448 CEU:1.0;0.82, CHB:1.0;1.0, YRI:0.805;0.625 FUNCTIONAL_SNP rs485186 chr19 49207206 Coding 5a 1659 CEU:1.0;0.96, CHB:1.0;1.0, YRI:0.805;0.625 FUNCTIONAL_SNP rs601338 chr19 49206674 Coding 5b 2191 CEU:1.0;0.817, CHB:1.0;0.659, YRI:0.77;0.593 FUNCTIONAL_SNP rs681343 chr19 49206462 Coding 5b 2403 CEU:1.0;0.82, CHB:1.0;1.0, YRI:0.805;0.625 FUNCTIONAL_SNP rs632111 chr19 49208978 Exon,non-coding 6 113 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.803 FUNCTIONAL_SNP rs503279 chr19 49209010 Exon,non-coding 7 145 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs569970 chr19 49207718 Exon,non-coding 6 1147 CEU:1.0;1.0, CHB:1.0;1.0, YRI:0.959;0.792 FUNCTIONAL_SNP rs507766 chr19 49208543 Exon,non-coding 7 322 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs676388 chr19 49211969 Intergenic 4 3104 CEU:1.0;0.961, CHB:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs679574 chr19 49206108 Intron 7 2757 CEU:1.0;0.816, CHB:1.0;1.0, YRI:0.793;0.605 FUNCTIONAL_SNP rs516246 chr19 49206172 Intron 7 2693 CEU:1.0;0.82, CHB:1.0;1.0, YRI:0.796;0.609 FUNCTIONAL_SNP rs633372 chr19 49209226 Intergenic 7 361 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs281379 chr19 49214274 Intergenic 7 5409 CEU:1.0;0.961, CHB:1.0;1.0 FUNCTIONAL_SNP rs516316 chr19 49206145 Intron 7 2720 CEU:1.0;0.82, CHB:1.0;1.0, YRI:0.805;0.625 LEAD_SNP rs281379 chr19 49214274 Intergenic 7 ASSOCIATION 21102463 Crohn's disease 11.15490196 FUT2 - MAMSTR FUNCTIONAL_SNP rs602662 chr19 49206985 Coding 5a 7289 CEU:1.0;0.886, CHB:1.0;1.0 FUNCTIONAL_SNP rs485186 chr19 49207206 Coding 5a 7068 CEU:1.0;0.923, CHB:1.0;1.0 FUNCTIONAL_SNP rs504963 chr19 49208865 Exon,non-coding 5b 5409 CEU:1.0;0.961, CHB:1.0;1.0 FUNCTIONAL_SNP rs632111 chr19 49208978 Exon,non-coding 6 5296 CEU:1.0;0.961, CHB:1.0;1.0 FUNCTIONAL_SNP rs503279 chr19 49209010 Exon,non-coding 7 5264 CEU:1.0;0.961, CHB:1.0;1.0 FUNCTIONAL_SNP rs569970 chr19 49207718 Exon,non-coding 6 6556 CEU:1.0;0.961, CHB:1.0;1.0 FUNCTIONAL_SNP rs507766 chr19 49208543 Exon,non-coding 7 5731 CEU:1.0;0.958, CHB:1.0;1.0 FUNCTIONAL_SNP rs676388 chr19 49211969 Intergenic 4 2305 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs633372 chr19 49209226 Intergenic 7 5048 CEU:1.0;0.961, CHB:1.0;1.0 LEAD_SNP rs2287921 chr19 49228272 Intron 4 ASSOCIATION 21060863 Retinal vascular caliber 24.6989700043 RASIP1 FUNCTIONAL_SNP rs838144 chr19 49250239 Intergenic 4 21967 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs973579 chr19 49241976 Intron 4 13704 CEU:1.0;0.851, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs838147 chr19 49246866 Intron 6 18594 CEU:1.0;0.851, CHB:1.0;1.0 FUNCTIONAL_SNP rs281408 chr19 49233406 Intron 7 5134 CEU:0.956;0.809 LEAD_SNP rs2280401 chr19 50000009 Intron 4 ASSOCIATION 20139978 Hematological and biochemical traits 7.52287874528 RPS11 LEAD_SNP rs3810265 chr19 50223266 Intergenic 5b ASSOCIATION 19165232 Panic disorder 5.39794000867 RPS9P4 LEAD_SNP rs3745516 chr19 50926742 Intron 4 ASSOCIATION 21399635 Primary biliary cirrhosis 12.6989700043 SPIB ASSOCIATION 20639880 Primary biliary cirrhosis 10.096910013 SPIB LEAD_SNP rs266849 chr19 51349090 Intergenic 7 ASSOCIATION 21160077 Serum prostate-specific antigen levels 9.22184874962 KLK15 - KLK3 LEAD_SNP rs17632542 chr19 51361757 Coding 5b ASSOCIATION 21160077 Serum prostate-specific antigen levels 45.5228787453 KLK3 LEAD_SNP rs2735839 chr19 51364623 Intergenic 5b ASSOCIATION 18264097 Prostate cancer 17.6989700043 KLK3 - KLK2 FUNCTIONAL_SNP rs2569735 chr19 51364269 Intergenic 5b 354 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 LEAD_SNP rs3826656 chr19 51726613 Intergenic 6 ASSOCIATION 18976728 Alzheimer's disease 5.22184874962 CD33 LEAD_SNP rs3865444 chr19 51727962 Intergenic 7 ASSOCIATION 21460841 Alzheimer's disease (late onset) 8.69897000434 CD33 FUNCTIONAL_SNP rs3852865 chr19 51714065 Intergenic 4 13897 CEU:0.95;0.821, JPT:0.912;0.713 FUNCTIONAL_SNP rs12985029 chr19 51713365 Intergenic 5a 14597 CEU:0.95;0.821, JPT:0.912;0.713 FUNCTIONAL_SNP rs1354106 chr19 51737991 Intron 5b 10029 CEU:1.0;0.901, CHB:0.814;0.662, JPT:0.915;0.774 LEAD_SNP rs1878047 chr19 51773802 Intergenic 7 ASSOCIATION 19851299 Body mass index 5.30102999566 SIGLEC23P - SIGLEC24P FUNCTIONAL_SNP rs6509524 chr19 51767844 Intron 7 5958 CEU:1.0;1.0, CHB:0.93;0.763, JPT:1.0;0.749 LEAD_SNP rs10411161 chr19 52372976 Intron 7 ASSOCIATION 21424380 Breast cancer 5.15490195999 ZNF577 FUNCTIONAL_SNP rs4514789 chr19 52365654 Intron 4 7322 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0 FUNCTIONAL_SNP rs10414104 chr19 52368132 Intron 6 4844 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0 FUNCTIONAL_SNP rs8111316 chr19 52369069 Intron 7 3907 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0 FUNCTIONAL_SNP rs17778649 chr19 52381616 Intron 7 8640 CEU:1.0;0.838, CHB:1.0;1.0, JPT:0.948;0.899 FUNCTIONAL_SNP rs3764540 chr19 52380681 Intron 7 7705 CEU:1.0;0.837, CHB:1.0;1.0, JPT:1.0;0.95 FUNCTIONAL_SNP rs3848562 chr19 52379835 Intron 7 6859 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;0.95 FUNCTIONAL_SNP rs10402727 chr19 52370379 Intron 7 2597 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0 FUNCTIONAL_SNP rs8106929 chr19 52368467 Intron 7 4509 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0 FUNCTIONAL_SNP rs8107422 chr19 52368775 Intron 7 4201 CEU:1.0;1.0, CHB:1.0;0.945, JPT:1.0;1.0, YRI:1.0;0.54 LEAD_SNP rs1671152 chr19 55526345 Coding 4 ASSOCIATION 20526338 Platelet aggregation 13.096910013 GP6 FUNCTIONAL_SNP rs1654416 chr19 55530035 Coding 5a 3690 CEU:1.0;0.819 FUNCTIONAL_SNP rs1654447 chr19 55570574 Coding 5a 44229 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs892089 chr19 55539061 Coding 4 12716 CEU:1.0;0.819 FUNCTIONAL_SNP rs892090 chr19 55539072 Coding 4 12727 CEU:1.0;1.0, CHB:1.0;1.0, YRI:0.934;0.512 FUNCTIONAL_SNP rs1613662 chr19 55536595 Coding 7 10250 CEU:1.0;1.0, CHB:1.0;1.0, YRI:0.934;0.512 FUNCTIONAL_SNP rs2304167 chr19 55527081 Coding 2b 736 CEU:1.0;0.819 FUNCTIONAL_SNP rs1671150 chr19 55525497 Coding 7 848 CEU:1.0;0.819, YRI:1.0;0.571 FUNCTIONAL_SNP rs1671151 chr19 55525894 Coding 7 451 CEU:1.0;0.819, YRI:1.0;0.549 FUNCTIONAL_SNP rs1654459 chr19 55574907 Exon,non-coding 4 48562 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs1671196 chr19 55539548 Intron 4 13203 CEU:1.0;0.819 FUNCTIONAL_SNP rs1654439 chr19 55553647 Intergenic 4 27302 CEU:1.0;0.873, CHB:1.0;1.0 FUNCTIONAL_SNP rs1671217 chr19 55554232 Intergenic 4 27887 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs1654419 chr19 55535881 Intron 5a 9536 CEU:1.0;0.819 FUNCTIONAL_SNP rs1671153 chr19 55527189 Intron 5a 844 CEU:1.0;0.819 FUNCTIONAL_SNP rs1654420 chr19 55536206 Intron 6 9861 CEU:1.0;0.819 FUNCTIONAL_SNP rs1654421 chr19 55537462 Intron 6 11117 CEU:1.0;0.819 FUNCTIONAL_SNP rs1654432 chr19 55550280 Intergenic 6 23935 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs1654433 chr19 55550312 Intergenic 6 23967 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs2569513 chr19 55552144 Intergenic 6 25799 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs1654444 chr19 55566454 Intron 6 40109 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs1654451 chr19 55572240 Intron 6 45895 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs11668169 chr19 55535482 Intron 6 9137 CEU:1.0;0.819 FUNCTIONAL_SNP rs11672026 chr19 55535515 Intron 6 9170 CEU:1.0;0.819 FUNCTIONAL_SNP rs2886415 chr19 55537081 Intron 7 10736 CEU:1.0;0.858 FUNCTIONAL_SNP rs1671192 chr19 55529933 Intron 7 3588 CEU:1.0;0.865 FUNCTIONAL_SNP rs1626971 chr19 55557024 Intron 7 30679 CEU:1.0;0.933, CHB:1.0;1.0 FUNCTIONAL_SNP rs11671922 chr19 55535289 Intron 7 8944 CEU:1.0;0.819 FUNCTIONAL_SNP rs11084381 chr19 55535412 Intron 7 9067 CEU:1.0;0.819 LEAD_SNP rs1172822 chr19 55819845 Intron 5b ASSOCIATION 19448621 Menarche and menopause (age at onset) 18.6989700043 BRSK1 ASSOCIATION 19448619 Menopause (age at onset) 10.2218487496 BRSK1 FUNCTIONAL_SNP rs11668344 chr19 55833664 Intron 4 13819 CEU:0.958;0.88, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.644 FUNCTIONAL_SNP rs4806660 chr19 55824634 Intron 5b 4789 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.567 FUNCTIONAL_SNP rs11668309 chr19 55833460 Intron 5b 13615 CEU:0.958;0.88, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.945;0.893 LEAD_SNP rs1126757 chr19 55879872 Coding 5b ASSOCIATION 20360315 Response to antidepressants 5.52287874528 IL11 LEAD_SNP rs299175 chr19 56313528 Intron 7 ASSOCIATION 19010793 Multiple sclerosis (severity) 5.39794000867 NLRP11 LEAD_SNP rs2014572 chr19 57760018 Coding 5b ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.15490195999 ZNF805 FUNCTIONAL_SNP rs10421632 chr19 57764770 Coding 7 4752 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933, YRI:1.0;0.865 FUNCTIONAL_SNP rs3746231 chr19 57760057 Coding 5b 39 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.936, YRI:1.0;1.0 FUNCTIONAL_SNP rs10412975 chr19 57770554 Exon,non-coding 7 10536 CEU:1.0;1.0, CHB:1.0;0.874, JPT:1.0;0.933, YRI:0.949;0.819 FUNCTIONAL_SNP rs4801452 chr19 57768066 Exon,non-coding 7 8048 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs7248000 chr19 57762139 Intron 7 2121 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.865 FUNCTIONAL_SNP rs11667407 chr19 57763122 Intron 7 3104 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.87 FUNCTIONAL_SNP rs10413671 chr19 57763489 Intron 7 3471 CEU:1.0;0.954, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.866 FUNCTIONAL_SNP rs8106734 chr19 57763546 Intron 7 3528 CEU:1.0;1.0, CHB:1.0;0.931, JPT:1.0;1.0, YRI:1.0;0.865 LEAD_SNP rs260461 chr19 58770883 Exon,non-coding 7 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.09691001301 ZNF544 LEAD_SNP rs6051520 chr20 351944 Intergenic 4 ASSOCIATION 21130836 Information processing speed 6.69897000434 NRSN2 - TRIB3 LEAD_SNP rs397020 chr20 1205886 Intergenic 5b ASSOCIATION 19010793 Multiple sclerosis 6.09691001301 RAD21L1 LEAD_SNP rs2281808 chr20 1610551 Intron 7 ASSOCIATION 19430480 Type 1 diabetes 11.0 SIRPG LEAD_SNP rs6136489 chr20 1923734 Intergenic 7 ASSOCIATION 19820697 Mean platelet volume 10.096910013 SIRPA - PDYN FUNCTIONAL_SNP rs13042885 chr20 1924707 Intergenic 3a 973 CEU:1.0;0.88, CHB:1.0;0.943, JPT:1.0;1.0 FUNCTIONAL_SNP rs6132106 chr20 1924127 Intergenic 5b 393 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4814776 chr20 1921523 Intergenic 5b 2211 CEU:1.0;0.941, CHB:1.0;0.943, JPT:0.941;0.836, YRI:0.95;0.902 FUNCTIONAL_SNP rs6112072 chr20 1922283 Intergenic 5b 1451 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;0.944, YRI:1.0;1.0 FUNCTIONAL_SNP rs11906768 chr20 1924066 Intergenic 5b 332 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6132105 chr20 1923674 Intergenic 6 60 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4814778 chr20 1922914 Intergenic 6 820 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4814779 chr20 1923271 Intergenic 6 463 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4618126 chr20 1930885 Intron 7 7151 CEU:1.0;0.919, JPT:0.864;0.701 FUNCTIONAL_SNP rs4144201 chr20 1923623 Intergenic 7 111 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6045559 chr20 1920578 Intergenic 7 3156 CEU:1.0;0.941, CHB:1.0;0.943, JPT:1.0;0.847, YRI:0.949;0.857 FUNCTIONAL_SNP rs4355178 chr20 1930873 Intron 7 7139 CEU:0.938;0.828, JPT:0.881;0.776 LEAD_SNP rs6045676 chr20 1941171 Intron 7 ASSOCIATION 21223598 Aortic root size 7.52287874528 SIRPA - PDYN FUNCTIONAL_SNP rs6045666 chr20 1940504 Intron 3a 667 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6049839 chr20 2518565 Intron 5b ASSOCIATION 21408207 Systemic lupus erythematosus 5.09691001301 TMC2 FUNCTIONAL_SNP rs6036862 chr20 2517448 Intron 5b 1117 CEU:1.0;1.0, CHB:1.0;0.761, JPT:1.0;0.715 FUNCTIONAL_SNP rs6132756 chr20 2517753 Intron 7 812 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.629 LEAD_SNP rs1810636 chr20 2654925 Intergenic 4 ASSOCIATION 20595579 Longevity 10.0 IDH3B - EBF4 FUNCTIONAL_SNP rs2422824 chr20 2647370 Intergenic 7 7555 CEU:1.0;0.958, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.7 FUNCTIONAL_SNP rs6051098 chr20 2656328 Intergenic 7 1403 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:0.94;0.505 LEAD_SNP rs11697186 chr20 3185123 Intron 4 ASSOCIATION 21659334 Response to hepatitis C treatment 24.0457574906 DDRGK1 ASSOCIATION 21659334 Response to hepatitis C treatment 16.3010299957 DDRGK1 LEAD_SNP rs6139030 chr20 3187733 Intergenic 6 ASSOCIATION 21659334 Response to hepatitis C treatment 24.6989700043 DDRGK1 - ITPA ASSOCIATION 21659334 Response to hepatitis C treatment 15.0 DDRGK1 - ITPA LEAD_SNP rs1127354 chr20 3193842 Coding 6 ASSOCIATION 20637204 Ribavirin-induced anemia 43.3979400087 ITPA LEAD_SNP rs965469 chr20 3381549 Intron 5b ASSOCIATION 21703177 IFN-related cytopenia 9.0 C20orf194 FUNCTIONAL_SNP rs6051818 chr20 3362033 Coding 7 19516 CEU:1.0;0.882, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6037515 chr20 3233091 Exon,non-coding 5b 148458 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;0.935 FUNCTIONAL_SNP rs6037516 chr20 3233142 Exon,non-coding 5b 148407 CEU:1.0;0.881, CHB:1.0;0.778, JPT:1.0;0.937 FUNCTIONAL_SNP rs6139064 chr20 3277050 Exon,non-coding 5b 104499 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs2236103 chr20 3276821 Exon,non-coding 7 104728 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6051761 chr20 3321568 Exon,non-coding 5b 59981 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6051762 chr20 3321590 Exon,non-coding 5b 59959 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873 FUNCTIONAL_SNP rs2236114 chr20 3296040 Intron 3a 85509 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6037566 chr20 3331414 Intron 4 50135 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6037595 chr20 3401128 Intergenic 4 19579 CEU:1.0;0.882, CHB:1.0;0.824, JPT:1.0;0.873 FUNCTIONAL_SNP rs2236121 chr20 3304320 Intron 4 77229 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs2207995 chr20 3294484 Intron 4 87065 CEU:1.0;0.832, CHB:1.0;0.708, JPT:1.0;1.0 FUNCTIONAL_SNP rs1040726 chr20 3264267 Intron 4 117282 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs6037567 chr20 3332160 Intron 5a 49389 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs6051708 chr20 3262493 Intron 5a 119056 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873, YRI:1.0;0.902 FUNCTIONAL_SNP rs2281503 chr20 3263636 Intron 5b 117913 CEU:1.0;0.836, CHB:1.0;0.904, JPT:1.0;0.935, YRI:0.878;0.689 FUNCTIONAL_SNP rs4611719 chr20 3228423 Intergenic 5b 153126 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.795, YRI:1.0;0.901 FUNCTIONAL_SNP rs2236089 chr20 3257194 Intron 5b 124355 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873, YRI:0.889;0.79 FUNCTIONAL_SNP rs6139071 chr20 3299054 Intron 5b 82495 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6051692 chr20 3244098 Intron 5b 137451 CEU:1.0;1.0, CHB:1.0;0.756, JPT:1.0;0.593, YRI:0.772;0.519 FUNCTIONAL_SNP rs6051732 chr20 3294182 Intron 5b 87367 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873, YRI:0.893;0.797 FUNCTIONAL_SNP rs6051772 chr20 3328654 Intron 5b 52895 CEU:1.0;0.832 FUNCTIONAL_SNP rs6051836 chr20 3386482 Intron 5b 4933 CEU:1.0;0.832 FUNCTIONAL_SNP rs6037523 chr20 3249463 Intron 6 132086 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6037538 chr20 3282978 Intron 6 98571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.92, YRI:0.944;0.891 FUNCTIONAL_SNP rs6037541 chr20 3287704 Intron 6 93845 CEU:1.0;0.831, CHB:1.0;0.722, JPT:1.0;1.0 FUNCTIONAL_SNP rs6037571 chr20 3334322 Intron 6 47227 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6515810 chr20 3370861 Intron 6 10688 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs2236107 chr20 3285821 Intron 6 95728 CEU:1.0;0.936, CHB:1.0;0.824, JPT:1.0;0.873 FUNCTIONAL_SNP rs6139092 chr20 3334651 Intron 6 46898 CEU:1.0;0.832, CHB:0.804;0.545, JPT:1.0;0.873 FUNCTIONAL_SNP rs2236118 chr20 3302058 Intron 6 79491 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs6133039 chr20 3385006 Intron 6 3457 CEU:1.0;0.832, CHB:1.0;0.779, JPT:1.0;1.0 FUNCTIONAL_SNP rs3746630 chr20 3320902 Intron 6 60647 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6051693 chr20 3244449 Intron 6 137100 CEU:1.0;0.818, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6051713 chr20 3265779 Intron 6 115770 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs1884563 chr20 3335540 Intron 6 46009 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6051745 chr20 3307243 Intron 6 74306 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6051764 chr20 3321807 Intron 6 59742 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.81 FUNCTIONAL_SNP rs6051785 chr20 3339199 Intron 6 42350 CEU:1.0;0.832, CHB:1.0;0.708, JPT:1.0;1.0 FUNCTIONAL_SNP rs6051790 chr20 3342994 Intron 6 38555 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs6051840 chr20 3391483 Intergenic 7 9934 CEU:1.0;0.936, CHB:1.0;0.824, JPT:1.0;0.873, YRI:0.881;0.631 FUNCTIONAL_SNP rs6051841 chr20 3392871 Intergenic 7 11322 CEU:1.0;0.938, CHB:1.0;0.824, JPT:1.0;0.873, YRI:0.885;0.641 FUNCTIONAL_SNP rs6051844 chr20 3402674 Intergenic 7 21125 CEU:1.0;0.882, CHB:1.0;0.824, JPT:1.0;0.873, YRI:0.885;0.641 FUNCTIONAL_SNP rs2281494 chr20 3235494 Intron 7 146055 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.935, YRI:1.0;0.902 FUNCTIONAL_SNP rs6037527 chr20 3254412 Intron 7 127137 CEU:1.0;0.882, CHB:1.0;0.72, JPT:1.0;1.0 FUNCTIONAL_SNP rs2281497 chr20 3258874 Intron 7 122675 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;0.806 FUNCTIONAL_SNP rs2281500 chr20 3262824 Intron 7 118725 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs6037546 chr20 3298697 Intron 7 82852 CEU:1.0;0.832, CHB:1.0;0.778, JPT:1.0;1.0 FUNCTIONAL_SNP rs6037551 chr20 3306690 Intron 7 74859 CEU:1.0;0.93, CHB:1.0;0.824, JPT:1.0;0.804, YRI:0.893;0.797 FUNCTIONAL_SNP rs6037553 chr20 3313884 Intron 7 67665 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873, YRI:0.893;0.797 FUNCTIONAL_SNP rs6037554 chr20 3315613 Intron 7 65936 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs6037560 chr20 3323055 Intron 7 58494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs6037562 chr20 3326141 Intron 7 55408 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.947 FUNCTIONAL_SNP rs6037597 chr20 3408374 Intergenic 7 26825 CEU:1.0;0.873, CHB:1.0;0.823, JPT:1.0;0.861 FUNCTIONAL_SNP rs6139048 chr20 3239753 Intron 7 141796 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6139079 chr20 3314374 Intron 7 67175 CEU:1.0;0.938, CHB:1.0;0.824, JPT:1.0;0.873 FUNCTIONAL_SNP rs6139080 chr20 3314506 Intron 7 67043 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs2236087 chr20 3255905 Intron 7 125644 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873 FUNCTIONAL_SNP rs6139068 chr20 3284393 Intron 7 97156 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873, YRI:0.893;0.797 FUNCTIONAL_SNP rs2236094 chr20 3260368 Intron 7 121181 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.817 FUNCTIONAL_SNP rs2236104 chr20 3277602 Intron 7 103947 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs2236109 chr20 3286439 Intron 7 95110 CEU:1.0;0.832, CHB:1.0;0.722, JPT:1.0;1.0 FUNCTIONAL_SNP rs2236112 chr20 3294983 Intron 7 86566 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs7274193 chr20 3329750 Intron 7 51799 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs2236115 chr20 3296279 Intron 7 85270 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6139093 chr20 3334838 Intron 7 46711 CEU:1.0;0.819, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs2236122 chr20 3305240 Intron 7 76309 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.944;0.844 FUNCTIONAL_SNP rs2236123 chr20 3305305 Intron 7 76244 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873, YRI:0.893;0.797 FUNCTIONAL_SNP rs3310 chr20 3237232 Intron 7 144317 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.902 FUNCTIONAL_SNP rs7270135 chr20 3247922 Intron 7 133627 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.867, YRI:1.0;0.711 FUNCTIONAL_SNP rs2207994 chr20 3294304 Intron 7 87245 CEU:1.0;0.825, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs2236119 chr20 3303576 Intron 7 77973 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs16988490 chr20 3335431 Intron 7 46118 CEU:1.0;0.882, CHB:0.804;0.545, JPT:1.0;0.873 FUNCTIONAL_SNP rs6051683 chr20 3237822 Intron 7 143727 CEU:1.0;0.832, CHB:1.0;0.692, JPT:1.0;0.928 FUNCTIONAL_SNP rs6051702 chr20 3251924 Intron 7 129625 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873, YRI:0.893;0.797 FUNCTIONAL_SNP rs6051709 chr20 3263685 Intron 7 117864 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.796 FUNCTIONAL_SNP rs6051716 chr20 3267736 Intron 7 113813 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873 FUNCTIONAL_SNP rs6051753 chr20 3315513 Intron 7 66036 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873, YRI:0.893;0.797 FUNCTIONAL_SNP rs6051771 chr20 3328271 Intron 7 53278 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6051807 chr20 3350485 Intron 7 31064 CEU:1.0;1.0, CHB:1.0;0.824, JPT:1.0;0.873 FUNCTIONAL_SNP rs2007022 chr20 3237674 Intron 7 143875 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6051830 chr20 3373397 Intron 7 8152 CEU:1.0;0.832, CHB:1.0;0.723, JPT:1.0;1.0 FUNCTIONAL_SNP rs6051831 chr20 3373712 Intron 7 7837 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.879;0.729 FUNCTIONAL_SNP rs6051839 chr20 3391191 Intergenic 7 9642 CEU:1.0;0.938, CHB:1.0;0.824, JPT:1.0;0.873, YRI:0.885;0.641 LEAD_SNP rs3761218 chr20 3776175 Intron 4 ASSOCIATION 17554300 Bipolar disorder 5.15490195999 CDC25B LEAD_SNP rs4815617 chr20 3827309 Intergenic 2b ASSOCIATION 20595579 Longevity 7.09691001301 MAVS ASSOCIATION 20159242 Asthma 5.09691001301 MAVS FUNCTIONAL_SNP rs8156 chr20 3786637 Exon,non-coding 4 40672 CEU:1.0;0.89 FUNCTIONAL_SNP rs11570030 chr20 3788194 Intergenic 2b 39115 CEU:1.0;0.89 FUNCTIONAL_SNP rs11570031 chr20 3788212 Intergenic 4 39097 CEU:1.0;0.879 LEAD_SNP rs16989303 chr20 4169079 Intergenic 6 ASSOCIATION 19165232 Panic disorder 5.22184874962 SMOX - ADRA1D LEAD_SNP rs6052699 chr20 4611877 Intergenic 6 ASSOCIATION 20526338 Platelet aggregation 5.69897000434 RPS4XP2 - PRNP FUNCTIONAL_SNP rs6052700 chr20 4611983 Intergenic 7 106 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.953 LEAD_SNP rs1799990 chr20 4680251 Coding 7 ASSOCIATION 19081515 Creutzfeldt-Jakob disease 20.6989700043 PRNP LEAD_SNP rs261360 chr20 5037774 Intergenic 2b ASSOCIATION 19896111 Hair morphology 5.52287874528 RPS21P7 - C20orf30 FUNCTIONAL_SNP rs261354 chr20 5040052 Intergenic 6 2278 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.825 FUNCTIONAL_SNP rs261356 chr20 5039792 Intergenic 6 2018 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.839 FUNCTIONAL_SNP rs261357 chr20 5039481 Intergenic 6 1707 CEU:1.0;0.913, CHB:0.951;0.905, JPT:1.0;1.0 FUNCTIONAL_SNP rs261355 chr20 5040041 Intergenic 7 2267 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.825 LEAD_SNP rs4815868 chr20 5840539 Intron 4 ASSOCIATION 21130836 Information processing speed 5.09691001301 C20orf196 FUNCTIONAL_SNP rs6107711 chr20 5840310 Intron 4 229 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0 LEAD_SNP rs236114 chr20 5935385 Intron 7 ASSOCIATION 19448619 Menopause (age at onset) 10.0 MCM8 LEAD_SNP rs454422 chr20 5943693 Intron 7 ASSOCIATION 20205591 HIV-1 control 6.0 MCM8 FUNCTIONAL_SNP rs236106 chr20 5960691 Intron 2c 16998 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.951, YRI:1.0;0.802 FUNCTIONAL_SNP rs6053815 chr20 5970438 Intron 4 26745 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs236104 chr20 5958960 Intron 6 15267 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.951, YRI:1.0;0.802 LEAD_SNP rs16991615 chr20 5948227 Coding 5b ASSOCIATION 19448621 Menarche and menopause (age at onset) 21.0 MCM8 LEAD_SNP rs2326679 chr20 6035228 Intergenic 4 ASSOCIATION 19448619 Menopause (age at onset) 5.69897000434 LRRN4 LEAD_SNP rs961253 chr20 6404281 Intergenic 5b ASSOCIATION 19011631 Colorectal cancer 9.69897000434 TARDBPL - BMP2 FUNCTIONAL_SNP rs2423158 chr20 6397236 Intergenic 4 7045 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2423159 chr20 6397292 Intergenic 4 6989 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5005940 chr20 6404442 Intergenic 6 161 CEU:1.0;1.0, CHB:1.0;0.823, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs355520 chr20 6403267 Intergenic 6 1014 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.955 FUNCTIONAL_SNP rs355523 chr20 6401824 Intergenic 6 2457 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.957 FUNCTIONAL_SNP rs2423160 chr20 6402559 Intergenic 6 1722 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6516163 chr20 6403919 Intergenic 6 362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6038483 chr20 6397036 Intergenic 6 7245 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4292146 chr20 6404117 Intergenic 7 164 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs355522 chr20 6402641 Intergenic 7 1640 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13045451 chr20 6405408 Intergenic 7 1127 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8124724 chr20 6403521 Intergenic 7 760 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6516162 chr20 6403804 Intergenic 7 477 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs967417 chr20 6620893 Intergenic 6 ASSOCIATION 18391951 Height 7.69897000434 TARDBPL - BMP2 LEAD_SNP rs2145270 chr20 6621685 Intergenic 7 ASSOCIATION 19079261 Body mass index 5.22184874962 TARDBPL - BMP2 FUNCTIONAL_SNP rs1000972 chr20 6621717 Intergenic 7 32 CEU:1.0;0.881, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;0.8 LEAD_SNP rs6085920 chr20 7180056 Intron 6 ASSOCIATION 18759275 Serum uric acid 5.22184874962 BMP2 - SRSF10P2 FUNCTIONAL_SNP rs6133401 chr20 7181330 Intron 6 1274 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6117693 chr20 7187874 Intron 6 7818 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6077155 chr20 7186230 Intron 6 6174 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1033604 chr20 7178839 Intron 7 1217 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs727463 chr20 7184250 Intron 7 4194 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6077153 chr20 7179994 Intron 7 62 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs6054802 chr20 7190319 Intron 7 10263 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 LEAD_SNP rs6108011 chr20 7552504 Intergenic 5b ASSOCIATION 17903294 Hemostatic factors and hematological phenotypes 5.22184874962 BMP2 - SRSF10P2 LEAD_SNP rs6118083 chr20 8114704 Intron 5b ASSOCIATION 20125193 Cognitive test performance 5.15490195999 PLCB1 LEAD_SNP rs6056209 chr20 8836771 Intron 7 ASSOCIATION 19734545 Cognitive performance 5.69897000434 PLCB1 LEAD_SNP rs2072910 chr20 9365303 Intron 5b ASSOCIATION 20172861 Neutrophil count 9.52287874528 PLCB4 FUNCTIONAL_SNP rs1983572 chr20 9358859 Intron 7 6444 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1028338 chr20 9364463 Intron 7 840 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2273061 chr20 10639543 Intron 2b ASSOCIATION 20096396 Bone mineral density 7.30102999566 JAG1 FUNCTIONAL_SNP rs2273060 chr20 10639385 Intron 4 158 CEU:1.0;0.957, JPT:1.0;0.68, YRI:1.0;1.0 FUNCTIONAL_SNP rs7265068 chr20 10642129 Intron 4 2586 CEU:1.0;1.0, CHB:1.0;0.87, JPT:1.0;0.909 FUNCTIONAL_SNP rs3748479 chr20 10641633 Intron 5b 2090 CEU:1.0;0.873, CHB:0.929;0.538 LEAD_SNP rs1884136 chr20 10850464 Intergenic 7 ASSOCIATION 21130836 Information processing speed 5.04575749056 JAG1 - FAT1P1 FUNCTIONAL_SNP rs11905130 chr20 10848277 Intergenic 6 2187 CEU:1.0;1.0, CHB:1.0;0.566, YRI:1.0;1.0 FUNCTIONAL_SNP rs17261295 chr20 10859918 Intron 6 9454 CEU:1.0;1.0, CHB:1.0;0.738, JPT:1.0;0.833 FUNCTIONAL_SNP rs6134068 chr20 10863048 Intron 6 12584 CEU:1.0;0.865 FUNCTIONAL_SNP rs11907137 chr20 10857632 Intron 7 7168 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7261320 chr20 10881235 Intron 7 30771 CEU:1.0;0.801, JPT:1.0;0.588 FUNCTIONAL_SNP rs1884137 chr20 10850346 Intergenic 7 118 CEU:1.0;1.0, CHB:1.0;0.566 FUNCTIONAL_SNP rs2327320 chr20 10880438 Intron 7 29974 CEU:1.0;0.879, JPT:1.0;0.502 LEAD_SNP rs2207418 chr20 11174903 Intergenic 6 ASSOCIATION 21348951 Cardiac hypertrophy 5.04575749056 FAT1P1 - RPS11P1 FUNCTIONAL_SNP rs6040420 chr20 11170323 Intergenic 6 4580 CEU:0.948;0.816, CHB:0.939;0.721, JPT:1.0;0.904 LEAD_SNP rs2073233 chr20 12874585 Intron 7 ASSOCIATION 20171287 Brain structure 6.0 PA2G4P2 - SPTLC3 FUNCTIONAL_SNP rs2423711 chr20 12874397 Intron 7 188 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs680379 chr20 12969400 Intergenic 6 ASSOCIATION 19798445 Sphingolipid levels 14.096910013 PA2G4P2 - SPTLC3 FUNCTIONAL_SNP rs3903703 chr20 12945963 Intergenic 4 23437 CEU:1.0;0.845, CHB:0.884;0.64, JPT:0.847;0.683 FUNCTIONAL_SNP rs4814176 chr20 12959398 Intergenic 5a 10002 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0 FUNCTIONAL_SNP rs438568 chr20 12958687 Intergenic 5b 10713 CEU:0.951;0.904, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs364585 chr20 12962718 Intergenic 5b 6682 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3843765 chr20 12943737 Intergenic 5b 25663 CEU:1.0;0.845, JPT:0.841;0.642 FUNCTIONAL_SNP rs2327451 chr20 12953934 Intergenic 6 15466 CEU:1.0;0.874, CHB:0.938;0.713, JPT:0.847;0.683 FUNCTIONAL_SNP rs168622 chr20 12966089 Intergenic 7 3311 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4508668 chr20 12955601 Intergenic 7 13799 CEU:1.0;0.845, CHB:0.941;0.691, JPT:0.847;0.683 LEAD_SNP rs17190927 chr20 13123733 Intron 7 ASSOCIATION 21368711 Personality dimensions 6.09691001301 SPTLC3 FUNCTIONAL_SNP rs8119743 chr20 13120092 Intron 5a 3641 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6078936 chr20 13118901 Intron 6 4832 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6109723 chr20 13115717 Intron 7 8016 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6074564 chr20 13136043 Intron 7 12310 CEU:1.0;1.0, CHB:1.0;0.924, JPT:0.873;0.719 FUNCTIONAL_SNP rs6078948 chr20 13152099 Intergenic 7 28366 CEU:1.0;0.906, CHB:1.0;1.0, JPT:0.937;0.782 FUNCTIONAL_SNP rs2236124 chr20 13106725 Intron 7 17008 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:1.0;0.743 FUNCTIONAL_SNP rs17812209 chr20 13154285 Intergenic 7 30552 CEU:1.0;0.828, CHB:1.0;1.0, JPT:0.937;0.784 LEAD_SNP rs1223271 chr20 13296912 Intron 7 ASSOCIATION 19915575 Parkinson's disease 5.30102999566 ISM1 - TASP1 LEAD_SNP rs6079395 chr20 14327899 Intron 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.15490195999 MACROD2 FUNCTIONAL_SNP rs6079398 chr20 14335355 Intron 7 7456 CEU:1.0;0.887, CHB:1.0;1.0, JPT:1.0;0.833, YRI:0.952;0.618 LEAD_SNP rs6110278 chr20 14388215 Intron 5b ASSOCIATION 19820697 Mean platelet volume 6.39794000867 MACROD2 FUNCTIONAL_SNP rs6110266 chr20 14360230 Intron 6 27985 CEU:0.926;0.857 FUNCTIONAL_SNP rs6135137 chr20 14372312 Intron 6 15903 CEU:1.0;1.0, CHB:0.951;0.863, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs992088 chr20 14363729 Intron 7 24486 CEU:1.0;1.0, CHB:0.951;0.863, JPT:1.0;0.953 FUNCTIONAL_SNP rs4464346 chr20 14353386 Intron 7 34829 CEU:1.0;0.951, CHB:0.951;0.863, JPT:1.0;0.952 FUNCTIONAL_SNP rs6135138 chr20 14382815 Intron 7 5400 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4141463 chr20 14747471 Intron 6 ASSOCIATION 20663923 Autism 7.39794000867 MACROD2 FUNCTIONAL_SNP rs6079536 chr20 14696882 Intron 6 50589 CEU:0.958;0.849 FUNCTIONAL_SNP rs735796 chr20 14745993 Intron 7 1478 CEU:1.0;0.886, JPT:1.0;0.64, YRI:1.0;0.851 FUNCTIONAL_SNP rs6514537 chr20 14747025 Intron 7 446 CEU:1.0;0.888, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.515 LEAD_SNP rs6110577 chr20 15335754 Intron 7 ASSOCIATION 19553259 Obesity (extreme) 5.30102999566 MACROD2 FUNCTIONAL_SNP rs6105393 chr20 15314105 Intron 2c 21649 CEU:1.0;1.0, CHB:0.952;0.906, JPT:1.0;0.908, YRI:1.0;0.514 FUNCTIONAL_SNP rs6105392 chr20 15314041 Intron 4 21713 CEU:1.0;1.0, CHB:0.949;0.9, JPT:1.0;0.902 FUNCTIONAL_SNP rs2423938 chr20 15319863 Intron 5a 15891 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.908, YRI:1.0;0.811 FUNCTIONAL_SNP rs2423936 chr20 15318782 Intron 5b 16972 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0, YRI:1.0;0.791 FUNCTIONAL_SNP rs6043213 chr20 15313903 Intron 5b 21851 CEU:1.0;1.0, CHB:0.95;0.902, JPT:1.0;0.902 FUNCTIONAL_SNP rs2423930 chr20 15313751 Intron 6 22003 CEU:1.0;1.0, CHB:0.952;0.906, JPT:1.0;0.908, YRI:1.0;0.619 FUNCTIONAL_SNP rs2423953 chr20 15337493 Intron 7 1739 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 FUNCTIONAL_SNP rs6043209 chr20 15308932 Intron 7 26822 CEU:1.0;0.923, CHB:0.951;0.862, JPT:1.0;0.866, YRI:0.812;0.659 LEAD_SNP rs2208059 chr20 16311310 Intron 6 ASSOCIATION 21139019 Ileal carcinoids 6.39794000867 KIF16B FUNCTIONAL_SNP rs6105582 chr20 16331060 Intron 4 19750 CEU:1.0;0.913, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2328018 chr20 16326664 Intron 5b 15354 CEU:1.0;0.913, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2180442 chr20 16330934 Intron 5b 19624 CEU:1.0;0.913, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6034461 chr20 16324636 Intron 6 13326 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1884606 chr20 16312529 Intron 6 1219 CEU:1.0;0.908, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8119246 chr20 16302864 Intron 6 8446 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.764 FUNCTIONAL_SNP rs2328016 chr20 16308085 Intron 6 3225 CEU:1.0;0.955 FUNCTIONAL_SNP rs6043882 chr20 16295374 Intron 6 15936 CEU:1.0;0.848, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.653 FUNCTIONAL_SNP rs6043892 chr20 16309650 Intron 6 1660 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.881 FUNCTIONAL_SNP rs4814469 chr20 16299132 Intron 7 12178 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.764 FUNCTIONAL_SNP rs6034447 chr20 16281884 Intron 7 29426 CEU:1.0;0.951, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.734 FUNCTIONAL_SNP rs6043881 chr20 16294575 Intron 7 16735 CEU:1.0;0.906, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs913826 chr20 16290687 Intron 7 20623 CEU:1.0;0.867, YRI:1.0;0.736 FUNCTIONAL_SNP rs1884605 chr20 16283909 Intron 7 27401 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.764 FUNCTIONAL_SNP rs2093004 chr20 16294181 Intron 7 17129 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.764 FUNCTIONAL_SNP rs2328017 chr20 16317613 Intron 7 6303 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2328019 chr20 16327825 Intron 7 16515 CEU:1.0;0.908, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1884604 chr20 16283898 Intron 7 27412 CEU:1.0;0.867, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs2144883 chr20 16325140 Intron 7 13830 CEU:1.0;0.908, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs852069 chr20 17122593 Intergenic 6 ASSOCIATION 21102462 Menarche (age at onset) 7.52287874528 OTOR - PCSK2 FUNCTIONAL_SNP rs852104 chr20 17154782 Intergenic 7 32189 CEU:0.916;0.805 LEAD_SNP rs4814615 chr20 17357573 Intron 7 ASSOCIATION 21546767 Dialysis-related mortality 5.30102999566 PCSK2 LEAD_SNP rs6044777 chr20 17368542 Intron 6 ASSOCIATION 19260141 Biochemical measures 5.09691001301 PCSK2 LEAD_SNP rs17725255 chr20 18079131 Intergenic 7 ASSOCIATION 21079607 Anorexia nervosa 5.69897000434 RPL15P1 - CSRP2BP LEAD_SNP rs3790268 chr20 19571581 Intron 7 ASSOCIATION 20031604 Serum matrix metalloproteinase 6.52287874528 SLC24A3 FUNCTIONAL_SNP rs6112476 chr20 19567118 Intron 5b 4463 CEU:1.0;0.938, CHB:1.0;1.0, JPT:1.0;0.927, YRI:0.921;0.787 FUNCTIONAL_SNP rs12624316 chr20 19570226 Intron 6 1355 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.823 FUNCTIONAL_SNP rs16980823 chr20 19531166 Intron 6 40415 CEU:1.0;0.936, CHB:1.0;0.697, JPT:1.0;0.924, YRI:0.783;0.537 FUNCTIONAL_SNP rs6112481 chr20 19573392 Intron 6 1811 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.775 FUNCTIONAL_SNP rs8126436 chr20 19570167 Intron 6 1414 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.823 FUNCTIONAL_SNP rs8113874 chr20 19570075 Intron 7 1506 CEU:1.0;1.0, CHB:1.0;0.862, JPT:1.0;1.0, YRI:0.772;0.519 FUNCTIONAL_SNP rs12624746 chr20 19566804 Intron 7 4777 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.798 FUNCTIONAL_SNP rs6106108 chr20 19567610 Intron 7 3971 CEU:1.0;0.864, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.817;0.613 FUNCTIONAL_SNP rs6106109 chr20 19568211 Intron 7 3370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.823 LEAD_SNP rs6046396 chr20 19852503 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.39794000867 RPL12P12 - RIN2 FUNCTIONAL_SNP rs2145552 chr20 19862248 Intergenic 3a 9745 CEU:0.947;0.897, CHB:1.0;0.949, JPT:1.0;1.0 FUNCTIONAL_SNP rs6112627 chr20 19857986 Intergenic 4 5483 CEU:1.0;0.949, CHB:1.0;0.949, JPT:1.0;1.0 LEAD_SNP rs2180439 chr20 21853100 Intergenic 6 ASSOCIATION 18849994 Male-pattern baldness 14.5228787453 RPL41P1 - ST13P FUNCTIONAL_SNP rs8121238 chr20 21848836 Intergenic 5a 4264 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6047684 chr20 21853764 Intergenic 5b 664 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6113404 chr20 21863825 Intergenic 6 10725 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6047685 chr20 21855904 Intergenic 6 2804 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6047688 chr20 21859207 Intergenic 6 6107 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.925 FUNCTIONAL_SNP rs6035978 chr20 21875139 Intergenic 7 22039 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6035979 chr20 21875172 Intergenic 7 22072 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6035980 chr20 21875728 Intergenic 7 22628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6035971 chr20 21856148 Intergenic 7 3048 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs997078 chr20 21850850 Intergenic 7 2250 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4815077 chr20 21859643 Intergenic 7 6543 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4815081 chr20 21877020 Intergenic 7 23920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2180438 chr20 21849282 Intergenic 7 3818 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs987050 chr20 21852049 Intergenic 7 1051 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs6047683 chr20 21853193 Intergenic 7 93 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6075852 chr20 21866151 Intergenic 7 13051 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.963 FUNCTIONAL_SNP rs6075854 chr20 21866377 Intergenic 7 13277 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6075855 chr20 21866547 Intergenic 7 13447 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1012184 chr20 21856914 Intergenic 7 3814 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1160312 chr20 22050503 Intron 6 ASSOCIATION 18849991 Male-pattern baldness 14.0 RPL41P1 - ST13P FUNCTIONAL_SNP rs6036029 chr20 22049177 Exon,non-coding 7 1326 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4813445 chr20 22047177 Intron 5a 3326 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs201594 chr20 22034671 Intergenic 5b 15832 CEU:1.0;0.961, CHB:0.943;0.889, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs6036026 chr20 22044205 Intron 6 6298 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6036037 chr20 22070525 Intergenic 6 20022 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1887056 chr20 22051811 Intron 6 1308 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6036041 chr20 22082448 Intergenic 7 31945 CEU:1.0;0.818, CHB:1.0;1.0, JPT:1.0;0.937, YRI:1.0;1.0 FUNCTIONAL_SNP rs6047844 chr20 22037575 Intron 7 12928 CEU:1.0;0.961, CHB:0.943;0.889, JPT:1.0;1.0, YRI:1.0;0.943 FUNCTIONAL_SNP rs4813446 chr20 22049759 Intron 7 744 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs201593 chr20 22033819 Intergenic 7 16684 CEU:1.0;0.961, CHB:0.94;0.834, JPT:1.0;1.0, YRI:1.0;0.889 LEAD_SNP rs1158167 chr20 23578189 Intergenic 7 ASSOCIATION 17903292 Cystatin C 8.04575749056 CST9L - CST9 FUNCTIONAL_SNP rs3004145 chr20 23582876 Intergenic 6 4687 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs2208289 chr20 23579526 Intergenic 7 1337 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.923 FUNCTIONAL_SNP rs3004139 chr20 23578674 Intergenic 7 485 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 LEAD_SNP rs911119 chr20 23612737 Intron 4 ASSOCIATION 20383146 Chronic kidney disease 137.698970004 CST9 - CST3 FUNCTIONAL_SNP rs3810575 chr20 23583392 Exon,non-coding 5a 29345 CEU:1.0;0.897, CHB:1.0;0.647, JPT:1.0;1.0 FUNCTIONAL_SNP rs13037490 chr20 23583725 Exon,non-coding 5b 29012 CEU:0.943;0.841, CHB:1.0;0.647, JPT:1.0;1.0 FUNCTIONAL_SNP rs6048956 chr20 23609301 Exon,non-coding 4 3436 CEU:1.0;1.0, CHB:1.0;0.806, JPT:1.0;1.0 FUNCTIONAL_SNP rs12625716 chr20 23606845 Intergenic 2b 5892 CEU:1.0;0.946, CHB:1.0;0.731, JPT:1.0;1.0 FUNCTIONAL_SNP rs6036476 chr20 23610308 Intron 2b 2429 CEU:1.0;0.807, CHB:0.792;0.628, JPT:1.0;1.0 FUNCTIONAL_SNP rs8121283 chr20 23605002 Intergenic 3b 7735 CEU:1.0;0.95, CHB:1.0;0.733, JPT:1.0;1.0 FUNCTIONAL_SNP rs12710327 chr20 23569689 Intergenic 4 43048 CEU:1.0;0.903, CHB:1.0;0.65, JPT:1.0;0.863 FUNCTIONAL_SNP rs3827142 chr20 23617007 Intron 4 4270 CEU:1.0;0.945, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs6515375 chr20 23610841 Intron 4 1896 CEU:1.0;0.891, CHB:0.889;0.713, JPT:1.0;1.0 FUNCTIONAL_SNP rs13038305 chr20 23610262 Intron 4 2475 CEU:1.0;1.0, CHB:1.0;0.806, JPT:1.0;1.0 FUNCTIONAL_SNP rs8121147 chr20 23601708 Intergenic 4 11029 CEU:0.944;0.891, CHB:1.0;0.733, JPT:1.0;1.0 FUNCTIONAL_SNP rs2424582 chr20 23622550 Intergenic 5a 9813 CEU:1.0;0.891, CHB:1.0;0.907, JPT:1.0;1.0, YRI:0.86;0.652 FUNCTIONAL_SNP rs6048920 chr20 23576844 Intergenic 5a 35893 CEU:1.0;0.897, CHB:1.0;0.647, JPT:1.0;0.876 FUNCTIONAL_SNP rs4815222 chr20 23576964 Intergenic 5a 35773 CEU:1.0;0.897, CHB:1.0;0.647, JPT:1.0;0.876 FUNCTIONAL_SNP rs6048926 chr20 23580987 Intergenic 5a 31750 CEU:1.0;0.903, CHB:1.0;0.65, JPT:1.0;0.876 FUNCTIONAL_SNP rs3088162 chr20 23607752 Intergenic 5a 4985 CEU:1.0;1.0, CHB:1.0;0.733, JPT:1.0;1.0 FUNCTIONAL_SNP rs8114619 chr20 23601813 Intergenic 5a 10924 CEU:0.947;0.898, CHB:1.0;0.733, JPT:1.0;1.0 FUNCTIONAL_SNP rs6036461 chr20 23576754 Intergenic 5a 35983 CEU:1.0;0.897, CHB:1.0;0.647, JPT:1.0;0.876 FUNCTIONAL_SNP rs3787499 chr20 23616807 Intron 5b 4070 CEU:1.0;0.944, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs2405392 chr20 23569186 Intergenic 5b 43551 CEU:1.0;0.903, CHB:1.0;0.65, JPT:1.0;0.877 FUNCTIONAL_SNP rs6114201 chr20 23607231 Intergenic 5b 5506 CEU:1.0;0.95, CHB:1.0;0.806, JPT:1.0;1.0 FUNCTIONAL_SNP rs7265178 chr20 23603382 Intergenic 5b 9355 CEU:1.0;0.95, CHB:1.0;0.733, JPT:1.0;1.0 FUNCTIONAL_SNP rs3827141 chr20 23616492 Intron 5b 3755 CEU:1.0;0.945, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs6036465 chr20 23588003 Intergenic 5b 24734 CEU:1.0;0.897, CHB:1.0;0.731, JPT:1.0;1.0 FUNCTIONAL_SNP rs4346460 chr20 23569400 Intergenic 5b 43337 CEU:1.0;0.897, CHB:1.0;0.647, JPT:1.0;0.876 FUNCTIONAL_SNP rs2254635 chr20 23622758 Intergenic 5b 10021 CEU:1.0;0.884, CHB:1.0;0.907, JPT:1.0;1.0, YRI:0.858;0.601 FUNCTIONAL_SNP rs6048952 chr20 23607257 Intergenic 5b 5480 CEU:1.0;0.946, CHB:1.0;0.731, JPT:1.0;1.0 FUNCTIONAL_SNP rs6114208 chr20 23621734 Intergenic 5b 8997 CEU:0.947;0.898, CHB:1.0;0.791, JPT:1.0;1.0 FUNCTIONAL_SNP rs1010117 chr20 23608421 Intergenic 5b 4316 CEU:1.0;1.0, CHB:1.0;0.732, JPT:1.0;1.0 FUNCTIONAL_SNP rs13043610 chr20 23586941 Intergenic 5b 25796 CEU:0.943;0.841, CHB:1.0;0.731, JPT:1.0;1.0 FUNCTIONAL_SNP rs35610040 chr20 23616469 Intron 5b 3732 CEU:1.0;0.945, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs3787498 chr20 23616781 Intron 5b 4044 CEU:1.0;0.945, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs6036478 chr20 23611359 Intron 5b 1378 CEU:1.0;0.945, CHB:1.0;0.692, JPT:1.0;1.0 FUNCTIONAL_SNP rs2405367 chr20 23622880 Intergenic 5b 10143 CEU:1.0;0.891, CHB:1.0;0.731, JPT:1.0;0.863 FUNCTIONAL_SNP rs4815224 chr20 23594112 Intergenic 5b 18625 CEU:0.944;0.891, CHB:1.0;0.731, JPT:1.0;1.0 FUNCTIONAL_SNP rs8116859 chr20 23590703 Intergenic 5b 22034 CEU:1.0;0.95, CHB:1.0;0.733, JPT:1.0;1.0 FUNCTIONAL_SNP rs1011226 chr20 23605833 Intergenic 6 6904 CEU:1.0;0.946, CHB:1.0;0.731, JPT:1.0;1.0 FUNCTIONAL_SNP rs6048928 chr20 23585988 Intron 6 26749 CEU:0.943;0.841, CHB:1.0;0.647, JPT:1.0;1.0 FUNCTIONAL_SNP rs6048945 chr20 23602228 Intergenic 6 10509 CEU:0.947;0.898, CHB:1.0;0.733, JPT:1.0;1.0 FUNCTIONAL_SNP rs6048946 chr20 23602307 Intergenic 6 10430 CEU:0.944;0.891, CHB:1.0;0.731, JPT:1.0;1.0 FUNCTIONAL_SNP rs6048929 chr20 23588855 Intergenic 6 23882 CEU:1.0;0.903, CHB:1.0;0.732, JPT:1.0;1.0 FUNCTIONAL_SNP rs4815223 chr20 23577112 Intergenic 6 35625 CEU:1.0;0.939, CHB:0.876;0.618, JPT:1.0;0.646 FUNCTIONAL_SNP rs6048933 chr20 23595637 Intergenic 6 17100 CEU:0.947;0.898, CHB:1.0;0.733, JPT:1.0;1.0 FUNCTIONAL_SNP rs6036463 chr20 23578940 Intergenic 6 33797 CEU:1.0;0.897, CHB:1.0;0.647, JPT:1.0;0.876 FUNCTIONAL_SNP rs3004145 chr20 23582876 Intergenic 6 29861 CEU:1.0;0.897, CHB:1.0;0.647, JPT:1.0;0.876 FUNCTIONAL_SNP rs6036474 chr20 23604414 Intergenic 6 8323 CEU:1.0;0.95, CHB:1.0;0.885, JPT:1.0;1.0 FUNCTIONAL_SNP rs1158167 chr20 23578189 Intergenic 7 34548 CEU:1.0;0.89, CHB:1.0;0.647, JPT:1.0;0.876 FUNCTIONAL_SNP rs6048923 chr20 23578206 Intergenic 7 34531 CEU:0.946;0.851, CHB:1.0;0.65, JPT:1.0;0.876 FUNCTIONAL_SNP rs6048924 chr20 23578996 Intergenic 7 33741 CEU:1.0;0.886, CHB:1.0;0.628, JPT:1.0;0.874 FUNCTIONAL_SNP rs2208289 chr20 23579526 Intergenic 7 33211 CEU:1.0;0.897, CHB:1.0;0.79, JPT:1.0;0.876 FUNCTIONAL_SNP rs13043266 chr20 23588127 Intergenic 7 24610 CEU:0.946;0.851, CHB:1.0;0.805, JPT:1.0;1.0 FUNCTIONAL_SNP rs3827143 chr20 23619617 Intergenic 7 6880 CEU:1.0;0.945, CHB:1.0;0.907, JPT:1.0;1.0 FUNCTIONAL_SNP rs6048930 chr20 23592492 Intergenic 7 20245 CEU:1.0;0.95, CHB:1.0;0.733, JPT:1.0;1.0 FUNCTIONAL_SNP rs3004139 chr20 23578674 Intergenic 7 34063 CEU:1.0;0.903, CHB:1.0;0.596, JPT:1.0;0.877 FUNCTIONAL_SNP rs17751897 chr20 23592714 Intergenic 7 20023 CEU:1.0;0.946, CHB:1.0;0.731, JPT:1.0;1.0 LEAD_SNP rs6138150 chr20 23847009 Intergenic 7 ASSOCIATION 18615156 Response to TNF antagonist treatment 5.52287874528 CST2 - CST5 FUNCTIONAL_SNP rs8184710 chr20 23813618 Intergenic 4 33391 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;1.0 FUNCTIONAL_SNP rs6138132 chr20 23815786 Intergenic 5a 31223 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs6138139 chr20 23827431 Intergenic 6 19578 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;1.0 FUNCTIONAL_SNP rs6138151 chr20 23847180 Intergenic 6 171 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.936 FUNCTIONAL_SNP rs6138131 chr20 23814236 Intergenic 7 32773 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs6138153 chr20 23850162 Intergenic 7 3153 CEU:1.0;0.939, CHB:1.0;0.947, JPT:1.0;0.855, YRI:1.0;0.835 LEAD_SNP rs6049375 chr20 24058407 Intergenic 5b ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.09691001301 POM121L3P - TMEM90B LEAD_SNP rs210135 chr20 31277094 Intergenic 5b ASSOCIATION 19820697 Hematological parameters 9.39794000867 BAK1 LEAD_SNP rs291671 chr20 31950845 Intron 5b ASSOCIATION 20585627 Hair color 14.6989700043 CDK5RAP1 FUNCTIONAL_SNP rs293721 chr20 32029439 Intron 4 78594 CEU:1.0;1.0 FUNCTIONAL_SNP rs721970 chr20 31903533 Intergenic 5b 47312 CEU:1.0;1.0 FUNCTIONAL_SNP rs293709 chr20 31938106 Intergenic 6 12739 CEU:1.0;1.0 FUNCTIONAL_SNP rs17401449 chr20 32067945 Intergenic 6 117100 CEU:1.0;1.0 FUNCTIONAL_SNP rs291695 chr20 31988202 Intron 7 37357 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7274811 chr20 32333181 Intron 7 ASSOCIATION 20881960 Height 20.0 ZNF341 ASSOCIATION 20881960 Height 21.2218487496 ZNF341 FUNCTIONAL_SNP rs1074683 chr20 32304653 Intron 7 28528 CEU:1.0;0.946, CHB:1.0;0.899, JPT:0.926;0.8, YRI:1.0;0.825 LEAD_SNP rs910873 chr20 33171772 Intron 6 ASSOCIATION 18488026 Melanoma 15.0 PIGU LEAD_SNP rs6120849 chr20 33730387 Intron 6 ASSOCIATION 20802025 Plasma levels of Protein C 36.15490196 EDEM2 FUNCTIONAL_SNP rs6058194 chr20 33739831 Intron 4 9444 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6060266 chr20 33733078 Intron 4 2691 CEU:1.0;0.917, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11696967 chr20 33743609 Intron 5b 13222 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6060278 chr20 33753262 Intron 5b 22875 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6088732 chr20 33744134 Intron 6 13747 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6088738 chr20 33747331 Intron 6 16944 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6060270 chr20 33736814 Intron 7 6427 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6088733 chr20 33744904 Intron 7 14517 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6088735 chr20 33745676 Intron 7 15289 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs867186 chr20 33764554 Coding 4 ASSOCIATION 21502573 D-dimer levels 5.39794000867 PROCR ASSOCIATION 20802025 Plasma levels of Protein C 199.698970004 PROCR ASSOCIATION 20231535 Plasma coagulation factors 36.2218487496 PROCR FUNCTIONAL_SNP rs11906160 chr20 33565755 Coding 5b 198799 CEU:1.0;1.0, CHB:1.0;0.586, JPT:0.785;0.617 FUNCTIONAL_SNP rs8119351 chr20 33754405 Intron 2b 10149 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.844;0.618 FUNCTIONAL_SNP rs6060244 chr20 33699435 Intergenic 4 65119 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.823 FUNCTIONAL_SNP rs17092456 chr20 33796192 Intron 4 31638 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7261167 chr20 33576205 Intron 4 188349 CEU:1.0;1.0, CHB:1.0;0.586, JPT:0.785;0.617 FUNCTIONAL_SNP rs10485508 chr20 33605098 Intron 5a 159456 CEU:1.0;1.0, CHB:1.0;0.586, JPT:0.785;0.617 FUNCTIONAL_SNP rs2295888 chr20 33722863 Intron 5a 41691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1033799 chr20 33720033 Intron 5a 44521 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs6060245 chr20 33699625 Intergenic 5a 64929 CEU:1.0;1.0, JPT:1.0;0.823 FUNCTIONAL_SNP rs7273734 chr20 33599403 Intron 5b 165151 CEU:1.0;1.0, CHB:1.0;0.586, JPT:0.785;0.617 FUNCTIONAL_SNP rs2889873 chr20 33646841 Intron 5b 117713 CEU:1.0;1.0, CHB:1.0;0.585, JPT:0.785;0.617 FUNCTIONAL_SNP rs7263253 chr20 33649376 Intron 5b 115178 CEU:1.0;1.0, CHB:1.0;0.741, JPT:0.785;0.617 FUNCTIONAL_SNP rs11167260 chr20 33775200 Intron 5b 10646 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7265317 chr20 33768523 Intron 5b 3969 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6579211 chr20 33605857 Intron 5b 158697 CEU:1.0;1.0, CHB:1.0;0.586, JPT:0.785;0.617 FUNCTIONAL_SNP rs1033797 chr20 33719687 Intron 5b 44867 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs8117847 chr20 33642480 Intron 5b 122074 CEU:1.0;1.0, CHB:1.0;0.741, JPT:0.785;0.617 FUNCTIONAL_SNP rs11699306 chr20 33801283 Intron 5b 36729 CEU:1.0;0.8, JPT:0.785;0.617 FUNCTIONAL_SNP rs17092215 chr20 33595913 Intron 5b 168641 CEU:1.0;1.0, CHB:1.0;0.586, JPT:0.785;0.617 FUNCTIONAL_SNP rs8117100 chr20 33692261 Intergenic 5b 72293 CEU:1.0;1.0, CHB:1.0;0.741, JPT:0.785;0.617 FUNCTIONAL_SNP rs7274866 chr20 33608616 Intron 5b 155938 CEU:1.0;1.0, CHB:1.0;0.586, JPT:0.785;0.617 FUNCTIONAL_SNP rs6120843 chr20 33718993 Intron 6 45561 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;1.0 FUNCTIONAL_SNP rs2069940 chr20 33759272 Intron 6 5282 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.607 FUNCTIONAL_SNP rs6060230 chr20 33689308 Intergenic 6 75246 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.785;0.617 FUNCTIONAL_SNP rs17092297 chr20 33703134 Intergenic 6 61420 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.823 FUNCTIONAL_SNP rs6060246 chr20 33701107 Intergenic 6 63447 CEU:1.0;1.0, CHB:1.0;0.741, JPT:1.0;0.823 FUNCTIONAL_SNP rs6060257 chr20 33720157 Intron 6 44397 CEU:1.0;1.0 FUNCTIONAL_SNP rs7261312 chr20 33684909 Intergenic 7 79645 CEU:1.0;1.0, CHB:1.0;0.741, JPT:0.785;0.617 FUNCTIONAL_SNP rs11906318 chr20 33729442 Intron 7 35112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs717593 chr20 33652964 Intron 7 111590 CEU:1.0;1.0, CHB:1.0;0.741, JPT:0.785;0.617 FUNCTIONAL_SNP rs7271729 chr20 33610992 Intron 7 153562 CEU:1.0;1.0, CHB:1.0;0.586, JPT:0.785;0.617 FUNCTIONAL_SNP rs17406518 chr20 33799176 Intron 7 34622 CEU:1.0;0.815, JPT:0.785;0.617 FUNCTIONAL_SNP rs11907010 chr20 33737661 Intron 7 26893 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs11908683 chr20 33720920 Intron 7 43634 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9941751 chr20 33645709 Intron 7 118845 CEU:1.0;1.0, JPT:0.785;0.617 LEAD_SNP rs1555322 chr20 33849179 Intron 6 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.39794000867 MMP24 FUNCTIONAL_SNP rs2425027 chr20 33849390 Intron 6 211 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.915;0.837 LEAD_SNP rs619865 chr20 33867697 Intron 2b ASSOCIATION 20585627 Freckling 13.3010299957 EIF6 LEAD_SNP rs6060369 chr20 33907161 Intron 4 ASSOCIATION 18391950 Height 16.0 UQCC ASSOCIATION 18193045 Height 15.6989700043 UQCC FUNCTIONAL_SNP rs3795159 chr20 33896262 Intron 2b 10899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs6088791 chr20 33907909 Intron 4 748 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6060373 chr20 33914208 Intron 4 7047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6060355 chr20 33890061 Intergenic 5b 17100 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs6060371 chr20 33913322 Intron 5b 6161 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2425062 chr20 33923566 Intron 6 16405 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6142374 chr20 33985568 Intron 7 78407 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.935;0.874 LEAD_SNP rs6088792 chr20 33909784 Intron 5b ASSOCIATION 18391951 Height 6.09691001301 UQCC FUNCTIONAL_SNP rs941665 chr20 33943281 Intron 5b 33497 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6088832 chr20 34006176 Intergenic 6 96392 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs6087709 chr20 34017944 Intergenic 6 108160 CEU:1.0;0.911, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs8123889 chr20 34013252 Intergenic 6 103468 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs17323916 chr20 33910581 Intron 7 797 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1204656 chr20 33982846 Intron 7 73062 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.921;0.848 FUNCTIONAL_SNP rs941664 chr20 33939973 Intron 7 30189 CEU:1.0;0.955, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.931 FUNCTIONAL_SNP rs1210224 chr20 33980860 Intron 7 71076 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6060373 chr20 33914208 Intron 4 ASSOCIATION 18391952 Height 16.6989700043 UQCC FUNCTIONAL_SNP rs3795159 chr20 33896262 Intron 2b 17946 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs6088791 chr20 33907909 Intron 4 6299 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6060369 chr20 33907161 Intron 4 7047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6060355 chr20 33890061 Intergenic 5b 24147 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.813 FUNCTIONAL_SNP rs6060371 chr20 33913322 Intron 5b 886 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2425062 chr20 33923566 Intron 6 9358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6142374 chr20 33985568 Intron 7 71360 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.935;0.874 LEAD_SNP rs6088813 chr20 33975181 Intron 4 ASSOCIATION 19343178 Height 13.0 UQCC FUNCTIONAL_SNP rs4911494 chr20 33971914 Coding 5a 3267 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6142376 chr20 33992761 Intron 4 17580 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs6142358 chr20 33960308 Intron 5a 14873 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1886691 chr20 33986271 Intron 5a 11090 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.956 FUNCTIONAL_SNP rs4911491 chr20 33947285 Intron 5b 27896 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4911178 chr20 33952620 Intron 6 22561 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6141548 chr20 33971085 Intron 6 4096 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6142352 chr20 33940497 Intron 6 34684 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4911492 chr20 33951799 Intron 7 23382 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4911179 chr20 33972899 Intron 7 2282 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2236164 chr20 34097353 Intron 7 ASSOCIATION 20189936 Height 5.69897000434 CEP250 FUNCTIONAL_SNP rs2281849 chr20 34060286 Intron 4 37067 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs750487 chr20 34066645 Intron 4 30708 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1886696 chr20 34055706 Intron 4 41647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2236160 chr20 34101821 Intergenic 5a 4468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs3818441 chr20 34046501 Intron 5a 50852 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs8116304 chr20 34054409 Intron 5b 42944 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs736031 chr20 34048625 Intron 5b 48728 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.86, YRI:1.0;1.0 FUNCTIONAL_SNP rs736032 chr20 34048661 Intron 5b 48692 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1570841 chr20 34048161 Intron 6 49192 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2236165 chr20 34096725 Intron 6 628 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6060431 chr20 34059337 Intron 6 38016 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6120959 chr20 34077848 Intron 6 19505 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs8115854 chr20 35766337 Coding 6 ASSOCIATION 19668339 Hippocampal atrophy 5.69897000434 C20orf132 LEAD_SNP rs6031882 chr20 35809783 Intron 4 ASSOCIATION 19668339 Hippocampal atrophy 5.22184874962 RPN2;C20orf132 LEAD_SNP rs4811196 chr20 36469694 Intron 6 ASSOCIATION 17903296 Bone mineral density 6.0 CTNNBL1 FUNCTIONAL_SNP rs2235479 chr20 36460667 Exon,non-coding 5b 9027 CEU:0.94;0.883, CHB:1.0;0.888, JPT:1.0;0.821, YRI:1.0;1.0 FUNCTIONAL_SNP rs4811210 chr20 36479463 Intron 2b 9769 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs17724914 chr20 36467794 Intron 2b 1900 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs17786860 chr20 36467639 Intron 4 2055 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs4811211 chr20 36479627 Intron 5a 9933 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs4809859 chr20 36478228 Intron 5b 8534 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;0.951 FUNCTIONAL_SNP rs6067889 chr20 36481099 Intron 5b 11405 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs6021024 chr20 36432194 Intron 5b 37500 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.822, YRI:1.0;0.953 FUNCTIONAL_SNP rs2235470 chr20 36473168 Intron 6 3474 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;1.0, YRI:1.0;0.944 FUNCTIONAL_SNP rs2235475 chr20 36464802 Intron 6 4892 CEU:1.0;1.0, CHB:1.0;0.822, JPT:1.0;0.809, YRI:1.0;1.0 FUNCTIONAL_SNP rs2294441 chr20 36463865 Intron 6 5829 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs6123033 chr20 36458865 Intron 7 10829 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2235457 chr20 36485184 Intron 7 15490 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.822, YRI:1.0;0.953 FUNCTIONAL_SNP rs2235461 chr20 36480983 Intron 7 11289 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs2235465 chr20 36474530 Intron 7 4836 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.822, YRI:1.0;0.904 FUNCTIONAL_SNP rs2235471 chr20 36465612 Intron 7 4082 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs2235472 chr20 36465511 Intron 7 4183 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs2235478 chr20 36461568 Intron 7 8126 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs2281146 chr20 36434857 Intron 7 34837 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs6067812 chr20 36466982 Intron 7 2712 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs6096486 chr20 36472452 Intron 7 2758 CEU:0.937;0.878, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1546868 chr20 36460443 Intron 7 9251 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs6067831 chr20 36472068 Intron 7 2374 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs4811199 chr20 36471673 Intron 7 1979 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs6067854 chr20 36476994 Intron 7 7300 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.822, YRI:1.0;0.904 FUNCTIONAL_SNP rs2294440 chr20 36464031 Intron 7 5663 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 FUNCTIONAL_SNP rs926394 chr20 36462507 Intron 7 7187 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.822, YRI:1.0;1.0 FUNCTIONAL_SNP rs6021357 chr20 36480259 Intron 7 10565 CEU:1.0;0.945, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs2179319 chr20 36471754 Intron 7 2060 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs2179320 chr20 36471785 Intron 7 2091 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs4239666 chr20 36471599 Intron 7 1905 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;0.915, YRI:1.0;1.0 FUNCTIONAL_SNP rs4811144 chr20 36441814 Intron 7 27880 CEU:1.0;1.0, CHB:1.0;0.877, JPT:1.0;0.822, YRI:1.0;0.867 FUNCTIONAL_SNP rs4811175 chr20 36458066 Intron 7 11628 CEU:1.0;0.943, CHB:1.0;0.888, JPT:1.0;0.833, YRI:1.0;1.0 LEAD_SNP rs6024905 chr20 36957837 Intron 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.0 BPI FUNCTIONAL_SNP rs5743533 chr20 36959318 Intron 2b 1481 CEU:0.956;0.915, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.683 FUNCTIONAL_SNP rs5743534 chr20 36959353 Intron 4 1516 CEU:0.959;0.85, JPT:1.0;0.778, YRI:1.0;0.679 FUNCTIONAL_SNP rs6069757 chr20 36956516 Intron 6 1321 CEU:1.0;0.88 FUNCTIONAL_SNP rs4592915 chr20 36957921 Intron 7 84 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6127771 chr20 36959732 Intron 7 1895 CEU:0.959;0.85, JPT:1.0;0.671, YRI:0.951;0.614 LEAD_SNP rs926392 chr20 37690464 Intergenic 7 ASSOCIATION 21546767 Dialysis-related mortality 6.30102999566 NPM1P19 - ATG3P1 FUNCTIONAL_SNP rs926391 chr20 37690485 Intergenic 7 21 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6028258 chr20 37692844 Intergenic 7 2380 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.822 LEAD_SNP rs6028466 chr20 38129002 Intergenic 7 ASSOCIATION 21460395 Telomere length 6.52287874528 ATG3P1 - HSPE1P1 LEAD_SNP rs6028945 chr20 38820805 Intergenic 5b ASSOCIATION 18615156 Response to TNF antagonist treatment 6.69897000434 HSPE1P1 - MAFB LEAD_SNP rs6102059 chr20 39228784 Intergenic 7 ASSOCIATION 19060906 LDL cholesterol 8.39794000867 HSPE1P1 - MAFB FUNCTIONAL_SNP rs6102050 chr20 39219060 Intergenic 4 9724 CEU:0.948;0.856, CHB:1.0;0.854, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs6102045 chr20 39207674 Intergenic 5b 21110 CEU:1.0;0.854, CHB:1.0;0.901, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs2092479 chr20 39204644 Intergenic 5b 24140 CEU:1.0;0.906, CHB:1.0;0.854, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs6102048 chr20 39212979 Intergenic 6 15805 CEU:0.948;0.856, CHB:1.0;0.854, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs976976 chr20 39210304 Intergenic 7 18480 CEU:1.0;0.95, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs910071 chr20 39213710 Intergenic 7 15074 CEU:0.948;0.856, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs6031252 chr20 42573822 Intron 3a ASSOCIATION 20585324 Conduct disorder (symptom count) 5.22184874962 TOX2 LEAD_SNP rs6017291 chr20 42854134 Exon,non-coding 7 ASSOCIATION 20125193 Cognitive test performance 5.22184874962 C20orf111 - GDAP1L1 LEAD_SNP rs1800961 chr20 43042364 Coding 4 ASSOCIATION 21300955 C-reactive protein 8.69897000434 HNF4A ASSOCIATION 19060906 HDL cholesterol 9.09691001301 HNF4A LEAD_SNP rs6017342 chr20 43065028 Intergenic 7 ASSOCIATION 21297633 Ulcerative colitis 20.0 HNF4A - RPL37AP1 ASSOCIATION 19915572 Ulcerative colitis 16.0457574906 HNF4A - RPL37AP1 LEAD_SNP rs1008953 chr20 43980726 Intergenic 7 ASSOCIATION 20953189 Psoriasis 7.0 SDC4 - SYS1 FUNCTIONAL_SNP rs2248637 chr20 43997240 Exon,non-coding 4 16514 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2245717 chr20 43995880 Exon,non-coding 6 15154 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7099 chr20 43997646 Exon,non-coding 5a 16920 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs2743439 chr20 43999636 Intron 4 18910 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.929;0.806 FUNCTIONAL_SNP rs2743411 chr20 43990054 Intergenic 4 9328 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1548226 chr20 43983777 Intergenic 5b 3051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1028307 chr20 44045570 Intron 5b 64844 CEU:1.0;0.946, CHB:1.0;0.91, JPT:0.949;0.901, YRI:1.0;1.0 FUNCTIONAL_SNP rs2741586 chr20 44043414 Intergenic 5b 62688 CEU:1.0;0.946, CHB:1.0;0.91, JPT:0.949;0.901, YRI:1.0;1.0 FUNCTIONAL_SNP rs2743419 chr20 43992645 Intron 5b 11919 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs2741638 chr20 44008520 Intron 6 27794 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1028306 chr20 44045880 Intron 6 65154 CEU:1.0;0.946, CHB:1.0;0.91, JPT:0.949;0.901, YRI:1.0;1.0 FUNCTIONAL_SNP rs2247037 chr20 44031295 Intron 6 50569 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2743423 chr20 43993539 Intron 6 12813 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs2741640 chr20 44008408 Intron 7 27682 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs763919 chr20 44016052 Intron 7 35326 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2743402 chr20 43985204 Intergenic 7 4478 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.823 FUNCTIONAL_SNP rs2741639 chr20 44008432 Intron 7 27706 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2263759 chr20 44011502 Intron 7 30776 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs11696501 chr20 44124523 Intergenic 5b ASSOCIATION 20171287 Brain structure 6.04575749056 RPL5P2 - SPINT3 FUNCTIONAL_SNP rs6065829 chr20 44126608 Intergenic 5b 2085 CEU:1.0;0.927, CHB:0.941;0.67, JPT:0.929;0.554 FUNCTIONAL_SNP rs6065823 chr20 44114873 Intergenic 7 9650 CEU:1.0;0.927, CHB:0.941;0.67, JPT:0.927;0.523 LEAD_SNP rs7679 chr20 44576502 Exon,non-coding 5b ASSOCIATION 19060906 HDL cholesterol 8.39794000867 PCIF1 ASSOCIATION 19060906 Triglycerides 10.15490196 PCIF1 LEAD_SNP rs6074022 chr20 44740196 Intergenic 4 ASSOCIATION 19525955 Multiple sclerosis 7.0 RPL13P2 - CD40 FUNCTIONAL_SNP rs1883832 chr20 44746982 Exon,non-coding 4 6786 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4810485 chr20 44747947 Intron 4 7751 CEU:1.0;1.0, CHB:1.0;0.892, JPT:1.0;1.0 FUNCTIONAL_SNP rs6065926 chr20 44735854 Intergenic 5b 4342 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4239702 chr20 44749251 Intron 5b 9055 CEU:1.0;0.809, CHB:0.941;0.837, JPT:1.0;1.0 FUNCTIONAL_SNP rs1569723 chr20 44742064 Intergenic 5b 1868 CEU:1.0;1.0, CHB:0.941;0.837, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6032664 chr20 44739419 Intergenic 7 777 CEU:1.0;1.0, CHB:1.0;0.893, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6032662 chr20 44734310 Intergenic 7 5886 CEU:1.0;1.0, CHB:0.941;0.837, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4810485 chr20 44747947 Intron 4 ASSOCIATION 20453842 Rheumatoid arthritis 8.52287874528 CD40 ASSOCIATION 18794853 Rheumatoid arthritis 8.09691001301 CD40 FUNCTIONAL_SNP rs1883832 chr20 44746982 Exon,non-coding 4 965 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6074022 chr20 44740196 Intergenic 4 7751 CEU:1.0;1.0, CHB:1.0;0.892, JPT:1.0;1.0 FUNCTIONAL_SNP rs6065926 chr20 44735854 Intergenic 5b 12093 CEU:1.0;1.0 FUNCTIONAL_SNP rs4239702 chr20 44749251 Intron 5b 1304 CEU:1.0;0.85, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1569723 chr20 44742064 Intergenic 5b 5883 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0 FUNCTIONAL_SNP rs6032664 chr20 44739419 Intergenic 7 8528 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6032662 chr20 44734310 Intergenic 7 13637 CEU:1.0;1.0, CHB:1.0;0.944, JPT:1.0;1.0 LEAD_SNP rs6066084 chr20 45460323 Intergenic 5b ASSOCIATION 19197348 Quantitative traits 5.69897000434 SLC2A10 - RPL13P14 FUNCTIONAL_SNP rs6018084 chr20 45461021 Intergenic 7 698 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6125048 chr20 46208605 Intron 5b ASSOCIATION 19176441 Response to treatment for acute lymphoblastic leukemia 5.69897000434 NCOA3 LEAD_SNP rs4810685 chr20 46400713 Intron 7 ASSOCIATION 18937294 Attention deficit hyperactivity disorder (time to onset) 5.15490195999 SULF2 LEAD_SNP rs13038095 chr20 46425576 Intergenic 6 ASSOCIATION 20173747 Atrial fibrillation 6.69897000434 SULF2 - SRMP1 LEAD_SNP rs11086243 chr20 46779235 Intergenic 5b ASSOCIATION 21441931 Nephrotic syndrome (acquired) 5.52287874528 SRMP1 - PREX1 FUNCTIONAL_SNP rs6066649 chr20 46779442 Intergenic 4 207 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.912 FUNCTIONAL_SNP rs6066651 chr20 46780313 Intergenic 4 1078 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.954;0.909 FUNCTIONAL_SNP rs6063215 chr20 46777514 Intergenic 4 1721 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs6094991 chr20 46779102 Intergenic 5b 133 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.953;0.908 FUNCTIONAL_SNP rs11700186 chr20 46778574 Intergenic 5b 661 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.952;0.866 FUNCTIONAL_SNP rs6066645 chr20 46778325 Intergenic 5b 910 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs6066646 chr20 46778604 Intergenic 5b 631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs11700195 chr20 46778503 Intergenic 5b 732 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.835 FUNCTIONAL_SNP rs6063216 chr20 46777647 Intergenic 5b 1588 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.832 FUNCTIONAL_SNP rs6063218 chr20 46778984 Intergenic 5b 251 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.879 LEAD_SNP rs6063312 chr20 47343059 Intron 6 ASSOCIATION 17903302 Tonometry 5.69897000434 PREX1 FUNCTIONAL_SNP rs6095261 chr20 47346494 Intron 6 3435 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs495337 chr20 48522330 Coding 4 ASSOCIATION 20953189 Psoriasis 6.69897000434 SPATA2 ASSOCIATION 18364390 Psoriasis 8.0 SPATA2 FUNCTIONAL_SNP rs6125829 chr20 48568929 Exon,non-coding 6 46599 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs2235617 chr20 48554977 Intron 4 32647 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.954, YRI:1.0;1.0 FUNCTIONAL_SNP rs1056198 chr20 48556229 Intron 5b 33899 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;1.0 LEAD_SNP rs6068020 chr20 50559652 Intergenic 6 ASSOCIATION 19478329 Male infertility 6.30102999566 RNU7-6P - ZFP64 LEAD_SNP rs6013382 chr20 50702633 Intron 5b ASSOCIATION 17362836 Amyotrophic lateral sclerosis 5.30102999566 ZFP64 FUNCTIONAL_SNP rs973341 chr20 50705584 Exon,non-coding 7 2951 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs2273382 chr20 50705211 Intron 6 2578 CEU:1.0;1.0, CHB:1.0;0.943, JPT:1.0;1.0, YRI:1.0;0.896 FUNCTIONAL_SNP rs6013386 chr20 50705994 Intron 6 3361 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs17731125 chr20 50699043 Intron 7 3590 CEU:1.0;0.924, CHB:1.0;0.943, JPT:1.0;0.95, YRI:0.961;0.827 FUNCTIONAL_SNP rs4811288 chr20 50691990 Intron 7 10643 CEU:1.0;0.959, CHB:1.0;0.937, JPT:1.0;0.95, YRI:0.96;0.825 LEAD_SNP rs6013509 chr20 51318351 Intergenic 7 ASSOCIATION 19862010 Hemoglobin 10.0 TRNAI30P - RPL36P1 FUNCTIONAL_SNP rs6126646 chr20 51319080 Intergenic 7 729 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.827 FUNCTIONAL_SNP rs4811385 chr20 51316850 Intergenic 7 1501 CEU:1.0;0.945, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs6091737 chr20 52349892 Intergenic 5b ASSOCIATION 20705733 Serum calcium 5.22184874962 RNU7-14P - SUMO1P1 FUNCTIONAL_SNP rs6126927 chr20 52330053 Intergenic 2b 19839 CEU:1.0;0.827 FUNCTIONAL_SNP rs6097549 chr20 52342899 Intergenic 5b 6993 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2870276 chr20 52350534 Intergenic 6 642 CEU:1.0;0.936, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.949 FUNCTIONAL_SNP rs12480103 chr20 52338770 Intergenic 7 11122 CEU:1.0;0.936, CHB:0.93;0.516, YRI:1.0;0.755 FUNCTIONAL_SNP rs6022698 chr20 52346953 Intergenic 7 2939 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.787 LEAD_SNP rs2023454 chr20 53267111 Exon,non-coding 5b ASSOCIATION 20215924 Functional MRI 6.30102999566 DOK5 LEAD_SNP rs6092078 chr20 53801129 Intergenic 7 ASSOCIATION 20195266 Response to antipsychotic treatment 5.52287874528 RPL12P4 - CBLN4 FUNCTIONAL_SNP rs7260864 chr20 53711353 Intergenic 4 89776 CEU:1.0;1.0 FUNCTIONAL_SNP rs8114487 chr20 53703008 Intergenic 4 98121 CEU:1.0;1.0 FUNCTIONAL_SNP rs7273934 chr20 53711084 Intergenic 4 90045 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098477 chr20 53811717 Intergenic 5a 10588 CEU:1.0;1.0, YRI:0.784;0.59 FUNCTIONAL_SNP rs6513034 chr20 53702868 Intergenic 5a 98261 CEU:1.0;1.0 FUNCTIONAL_SNP rs17000632 chr20 53676803 Intergenic 5b 124326 CEU:1.0;1.0 FUNCTIONAL_SNP rs12329514 chr20 53790389 Intergenic 5b 10740 CEU:1.0;1.0 FUNCTIONAL_SNP rs6023981 chr20 53868218 Intergenic 5b 67089 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098421 chr20 53706906 Intergenic 5b 94223 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098431 chr20 53712751 Intergenic 5b 88378 CEU:1.0;1.0 FUNCTIONAL_SNP rs7262222 chr20 53687178 Intergenic 6 113951 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098453 chr20 53774101 Intergenic 6 27028 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098474 chr20 53807336 Intergenic 6 6207 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098478 chr20 53814020 Intergenic 6 12891 CEU:1.0;1.0 FUNCTIONAL_SNP rs1392213 chr20 53674036 Intergenic 6 127093 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098519 chr20 53876665 Intergenic 6 75536 CEU:1.0;1.0 FUNCTIONAL_SNP rs8117352 chr20 53688597 Intergenic 6 112532 CEU:1.0;1.0 FUNCTIONAL_SNP rs2870387 chr20 53689863 Intergenic 6 111266 CEU:1.0;1.0 FUNCTIONAL_SNP rs11906711 chr20 53702550 Intergenic 6 98579 CEU:1.0;1.0 FUNCTIONAL_SNP rs7269558 chr20 53686024 Intergenic 6 115105 CEU:1.0;1.0 FUNCTIONAL_SNP rs2426551 chr20 53753686 Intergenic 6 47443 CEU:1.0;1.0 FUNCTIONAL_SNP rs2426553 chr20 53757694 Intergenic 6 43435 CEU:1.0;1.0 FUNCTIONAL_SNP rs8117455 chr20 53689070 Intergenic 6 112059 CEU:1.0;1.0 FUNCTIONAL_SNP rs7262424 chr20 53687467 Intergenic 6 113662 CEU:1.0;1.0 FUNCTIONAL_SNP rs6023903 chr20 53758446 Intergenic 6 42683 CEU:1.0;1.0 FUNCTIONAL_SNP rs6092046 chr20 53702272 Intergenic 6 98857 CEU:1.0;1.0 FUNCTIONAL_SNP rs6092049 chr20 53705130 Intergenic 6 95999 CEU:1.0;1.0 FUNCTIONAL_SNP rs6092064 chr20 53759569 Intergenic 6 41560 CEU:1.0;1.0 FUNCTIONAL_SNP rs6023973 chr20 53861820 Intergenic 6 60691 CEU:1.0;1.0 FUNCTIONAL_SNP rs2022184 chr20 53683322 Intergenic 6 117807 CEU:1.0;1.0 FUNCTIONAL_SNP rs6092092 chr20 53858278 Intergenic 6 57149 CEU:1.0;1.0 FUNCTIONAL_SNP rs12106069 chr20 53695922 Intergenic 6 105207 CEU:1.0;1.0 FUNCTIONAL_SNP rs7262572 chr20 53687704 Intergenic 6 113425 CEU:1.0;1.0 FUNCTIONAL_SNP rs6513030 chr20 53691770 Intergenic 6 109359 CEU:1.0;1.0 FUNCTIONAL_SNP rs2209716 chr20 53810992 Intergenic 6 9863 CEU:1.0;1.0, YRI:0.903;0.617 FUNCTIONAL_SNP rs12106061 chr20 53695565 Intergenic 6 105564 CEU:1.0;1.0 FUNCTIONAL_SNP rs12106216 chr20 53695775 Intergenic 6 105354 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098411 chr20 53701848 Intergenic 6 99281 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098416 chr20 53704974 Intergenic 6 96155 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098418 chr20 53705605 Intergenic 6 95524 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098422 chr20 53707375 Intergenic 6 93754 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098428 chr20 53708844 Intergenic 6 92285 CEU:1.0;1.0 FUNCTIONAL_SNP rs7267364 chr20 53832909 Intergenic 7 31780 CEU:1.0;1.0 FUNCTIONAL_SNP rs7267366 chr20 53698517 Intergenic 7 102612 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098471 chr20 53796594 Intergenic 7 4535 CEU:1.0;1.0, YRI:0.95;0.699 FUNCTIONAL_SNP rs6098472 chr20 53797899 Intergenic 7 3230 CEU:1.0;1.0, YRI:0.861;0.652 FUNCTIONAL_SNP rs6064175 chr20 53764620 Intergenic 7 36509 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098504 chr20 53858527 Intergenic 7 57398 CEU:1.0;1.0 FUNCTIONAL_SNP rs8117330 chr20 53688806 Intergenic 7 112323 CEU:1.0;1.0 FUNCTIONAL_SNP rs7262813 chr20 53688020 Intergenic 7 113109 CEU:1.0;1.0 FUNCTIONAL_SNP rs11907681 chr20 53795629 Intergenic 7 5500 CEU:1.0;1.0, YRI:0.785;0.568 FUNCTIONAL_SNP rs2870391 chr20 53762628 Intergenic 7 38501 CEU:1.0;1.0 FUNCTIONAL_SNP rs6023807 chr20 53658306 Intergenic 7 142823 CEU:1.0;1.0 FUNCTIONAL_SNP rs8125058 chr20 53680361 Intergenic 7 120768 CEU:1.0;1.0 FUNCTIONAL_SNP rs6023838 chr20 53701811 Intergenic 7 99318 CEU:1.0;1.0 FUNCTIONAL_SNP rs11906720 chr20 53702403 Intergenic 7 98726 CEU:1.0;1.0 FUNCTIONAL_SNP rs7263395 chr20 53683060 Intergenic 7 118069 CEU:1.0;1.0 FUNCTIONAL_SNP rs7262388 chr20 53687144 Intergenic 7 113985 CEU:1.0;1.0 FUNCTIONAL_SNP rs2426552 chr20 53757603 Intergenic 7 43526 CEU:1.0;1.0 FUNCTIONAL_SNP rs2767558 chr20 53855718 Intergenic 7 54589 CEU:1.0;1.0 FUNCTIONAL_SNP rs8124104 chr20 53688891 Intergenic 7 112238 CEU:1.0;1.0 FUNCTIONAL_SNP rs1499857 chr20 53703736 Intergenic 7 97393 CEU:1.0;1.0 FUNCTIONAL_SNP rs6023900 chr20 53757048 Intergenic 7 44081 CEU:1.0;1.0 FUNCTIONAL_SNP rs7264477 chr20 53686517 Intergenic 7 114612 CEU:1.0;1.0 FUNCTIONAL_SNP rs7272670 chr20 53683153 Intergenic 7 117976 CEU:1.0;1.0 FUNCTIONAL_SNP rs8121384 chr20 53685781 Intergenic 7 115348 CEU:1.0;1.0 FUNCTIONAL_SNP rs6092043 chr20 53701990 Intergenic 7 99139 CEU:1.0;1.0 FUNCTIONAL_SNP rs6092048 chr20 53704850 Intergenic 7 96279 CEU:1.0;1.0 FUNCTIONAL_SNP rs6092050 chr20 53705149 Intergenic 7 95980 CEU:1.0;1.0 FUNCTIONAL_SNP rs6092051 chr20 53705685 Intergenic 7 95444 CEU:1.0;1.0 FUNCTIONAL_SNP rs2022183 chr20 53683518 Intergenic 7 117611 CEU:1.0;1.0 FUNCTIONAL_SNP rs6092077 chr20 53797798 Intergenic 7 3331 CEU:1.0;1.0, YRI:0.866;0.689 FUNCTIONAL_SNP rs6092080 chr20 53803347 Intergenic 7 2218 CEU:1.0;1.0 FUNCTIONAL_SNP rs6014261 chr20 53677147 Intergenic 7 123982 CEU:1.0;1.0 FUNCTIONAL_SNP rs6092086 chr20 53810107 Intergenic 7 8978 CEU:1.0;1.0 FUNCTIONAL_SNP rs12106060 chr20 53695423 Intergenic 7 105706 CEU:1.0;1.0 FUNCTIONAL_SNP rs7270221 chr20 53687503 Intergenic 7 113626 CEU:1.0;1.0 FUNCTIONAL_SNP rs12106065 chr20 53695659 Intergenic 7 105470 CEU:1.0;1.0 FUNCTIONAL_SNP rs7274356 chr20 53698726 Intergenic 7 102403 CEU:1.0;1.0 FUNCTIONAL_SNP rs7271291 chr20 53686456 Intergenic 7 114673 CEU:1.0;1.0 FUNCTIONAL_SNP rs6513028 chr20 53681895 Intergenic 7 119234 CEU:1.0;1.0 FUNCTIONAL_SNP rs6513031 chr20 53691924 Intergenic 7 109205 CEU:1.0;1.0 FUNCTIONAL_SNP rs6513032 chr20 53692061 Intergenic 7 109068 CEU:1.0;1.0 FUNCTIONAL_SNP rs8121325 chr20 53685690 Intergenic 7 115439 CEU:1.0;1.0 FUNCTIONAL_SNP rs7264659 chr20 53686887 Intergenic 7 114242 CEU:1.0;1.0 FUNCTIONAL_SNP rs7271330 chr20 53679350 Intergenic 7 121779 CEU:1.0;1.0 FUNCTIONAL_SNP rs8124923 chr20 53680302 Intergenic 7 120827 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098412 chr20 53703996 Intergenic 7 97133 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098413 chr20 53704294 Intergenic 7 96835 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098415 chr20 53704965 Intergenic 7 96164 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098417 chr20 53705048 Intergenic 7 96081 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098419 chr20 53706301 Intergenic 7 94828 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098420 chr20 53706785 Intergenic 7 94344 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098423 chr20 53707527 Intergenic 7 93602 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098424 chr20 53707609 Intergenic 7 93520 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098425 chr20 53707917 Intergenic 7 93212 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098426 chr20 53707976 Intergenic 7 93153 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098429 chr20 53708955 Intergenic 7 92174 CEU:1.0;1.0 FUNCTIONAL_SNP rs6098430 chr20 53709806 Intergenic 7 91323 CEU:1.0;1.0 FUNCTIONAL_SNP rs7271935 chr20 53704366 Intergenic 7 96763 CEU:1.0;1.0 LEAD_SNP rs331615 chr20 55638537 Intergenic 7 ASSOCIATION 21738478 White blood cell types 6.04575749056 PTMAP6 - BMP7 LEAD_SNP rs6127921 chr20 55638750 Intergenic 6 ASSOCIATION 19846067 Response to citalopram treatment 6.0 PTMAP6 - BMP7 ASSOCIATION 19846067 Response to citalopram treatment 5.52287874528 PTMAP6 - BMP7 FUNCTIONAL_SNP rs4811793 chr20 55638220 Intergenic 6 530 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.826, YRI:1.0;0.812 FUNCTIONAL_SNP rs4811794 chr20 55639243 Intergenic 7 493 CEU:1.0;0.801, CHB:1.0;0.869, JPT:1.0;0.826, YRI:0.947;0.896 LEAD_SNP rs6092477 chr20 55991695 Intergenic 5b ASSOCIATION 20139978 Hematological and biochemical traits 8.0 RBM38 - HMGB1L1 LEAD_SNP rs6070116 chr20 56044184 Intergenic 3a ASSOCIATION 20339536 Response to statin therapy 5.39794000867 RBM38 - HMGB1L1 FUNCTIONAL_SNP rs12151923 chr20 56044837 Intergenic 4 653 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.943 FUNCTIONAL_SNP rs12151868 chr20 56044642 Intergenic 5b 458 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12151866 chr20 56044744 Intergenic 5b 560 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;0.947 LEAD_SNP rs2073145 chr20 56190634 Coding 7 ASSOCIATION 19668339 Hippocampal atrophy 5.69897000434 ZBP1 LEAD_SNP rs4811971 chr20 56796784 Intron 5b ASSOCIATION 19893584 Height 5.22184874962 ANKRD60 LEAD_SNP rs127430 chr20 57164855 Intron 5b ASSOCIATION 20838585 Cardiovascular disease risk factors 6.0 APCDD1L - MGC4294 FUNCTIONAL_SNP rs6026384 chr20 57167268 Intron 5b 2413 CEU:1.0;0.925, CHB:1.0;0.95, JPT:1.0;0.949 FUNCTIONAL_SNP rs6026389 chr20 57172970 Intron 5b 8115 CEU:1.0;0.925 FUNCTIONAL_SNP rs6064676 chr20 57165511 Intron 5b 656 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs2281395 chr20 57171223 Intron 5b 6368 CEU:1.0;0.924, CHB:0.877;0.625, JPT:0.858;0.585 FUNCTIONAL_SNP rs8117975 chr20 57170396 Intron 5b 5541 CEU:1.0;0.925, CHB:0.832;0.597, JPT:0.82;0.576 FUNCTIONAL_SNP rs6070524 chr20 57164947 Intron 5b 92 CEU:1.0;1.0, CHB:1.0;0.951, JPT:1.0;0.949 FUNCTIONAL_SNP rs6070525 chr20 57165467 Intron 5b 612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942 FUNCTIONAL_SNP rs6070526 chr20 57165617 Intron 5b 762 CEU:1.0;0.924, CHB:1.0;0.948, JPT:1.0;0.942 FUNCTIONAL_SNP rs6070527 chr20 57165688 Intron 5b 833 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.949 FUNCTIONAL_SNP rs6070532 chr20 57171698 Intron 6 6843 CEU:1.0;0.925, CHB:0.877;0.625, JPT:0.82;0.576 FUNCTIONAL_SNP rs2281396 chr20 57171525 Intron 7 6670 CEU:1.0;0.925, CHB:0.872;0.588, JPT:0.813;0.539 FUNCTIONAL_SNP rs2281397 chr20 57171540 Intron 7 6685 CEU:1.0;0.929, CHB:0.937;0.679, JPT:0.915;0.603 FUNCTIONAL_SNP rs2281398 chr20 57171596 Intron 7 6741 CEU:1.0;0.928, JPT:0.858;0.585 FUNCTIONAL_SNP rs16982139 chr20 57165836 Intron 7 981 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.942 LEAD_SNP rs13831 chr20 57475191 Exon,non-coding 7 ASSOCIATION 21046636 Event-related brain oscillations 5.22184874962 GNAS LEAD_SNP rs16982520 chr20 57758720 Intergenic 5a ASSOCIATION 19430479 Hypertension 6.69897000434 MRPS16P - ZNF831 LEAD_SNP rs12625057 chr20 57790436 Intron 5b ASSOCIATION 19875103 Response to antipsychotic therapy (extrapyramidal side effects) 5.15490195999 ZNF831 LEAD_SNP rs6027755 chr20 59268710 Intergenic 5b ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.22184874962 MTCO2P1 - CDH4 LEAD_SNP rs1970546 chr20 59853938 Intron 5b ASSOCIATION 17903297 Volumetric brain MRI 7.39794000867 CDH4 LEAD_SNP rs4468878 chr20 59928237 Intron 5b ASSOCIATION 20834067 Longevity 6.0 CDH4 LEAD_SNP rs4925189 chr20 59947044 Intron 5b ASSOCIATION 20932310 T-tau 6.22184874962 CDH4 LEAD_SNP rs2024714 chr20 60212494 Intron 5b ASSOCIATION 20834067 Longevity 6.0 CDH4 LEAD_SNP rs944260 chr20 60243411 Intron 4 ASSOCIATION 21658281 Sudden cardiac arrest 5.69897000434 CDH4 LEAD_SNP rs4925386 chr20 60921044 Intron 4 ASSOCIATION 20972440 Colorectal cancer 9.69897000434 LAMA5 FUNCTIONAL_SNP rs8124907 chr20 60913127 Coding 4 7917 CEU:1.0;0.842, CHB:1.0;0.753 FUNCTIONAL_SNP rs624313 chr20 60927412 Coding 5b 6368 CEU:1.0;0.812, CHB:0.934;0.872, JPT:1.0;1.0 FUNCTIONAL_SNP rs2427293 chr20 60925859 Intron 2b 4815 CEU:1.0;0.842, CHB:1.0;0.696, JPT:1.0;0.514 FUNCTIONAL_SNP rs6142735 chr20 60918087 Intron 4 2957 CEU:1.0;0.842, CHB:1.0;0.753 FUNCTIONAL_SNP rs6142738 chr20 60919960 Intron 4 1084 CEU:1.0;0.842, CHB:1.0;0.753, JPT:1.0;0.514 FUNCTIONAL_SNP rs77994 chr20 60930093 Intron 4 9049 CEU:1.0;0.811, CHB:1.0;0.873, JPT:1.0;1.0 FUNCTIONAL_SNP rs2151512 chr20 60913495 Intron 4 7549 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.876 FUNCTIONAL_SNP rs6121990 chr20 60919263 Intron 5b 1781 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs639836 chr20 60926223 Intron 5b 5179 CEU:1.0;0.802, CHB:1.0;0.935, JPT:1.0;1.0 FUNCTIONAL_SNP rs4925389 chr20 60922512 Intron 5b 1468 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.931;0.57 FUNCTIONAL_SNP rs6121989 chr20 60916713 Intron 6 4331 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.934 FUNCTIONAL_SNP rs6143035 chr20 60920700 Intron 6 344 CEU:1.0;0.842, CHB:1.0;0.753, JPT:1.0;0.514 LEAD_SNP rs6010620 chr20 62309839 Intron 5b ASSOCIATION 21531791 Glioma 8.69897000434 RTEL1 ASSOCIATION 19578367 Glioma 11.5228787453 RTEL1 ASSOCIATION 19578366 Glioma (high-grade) 8.52287874528 RTEL1 FUNCTIONAL_SNP rs6062302 chr20 62320968 Coding 5b 11129 CEU:1.0;1.0, CHB:0.946;0.851, JPT:1.0;0.899, YRI:1.0;1.0 FUNCTIONAL_SNP rs2236507 chr20 62323006 Intron 2b 13167 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;0.899 FUNCTIONAL_SNP rs3761124 chr20 62288752 Intergenic 4 21087 CEU:1.0;0.951, CHB:0.895;0.801, JPT:0.945;0.893, YRI:1.0;1.0 FUNCTIONAL_SNP rs1151624 chr20 62369895 Intron 5b 60056 CEU:0.943;0.842, JPT:1.0;0.696 FUNCTIONAL_SNP rs6010998 chr20 62294402 Intron 5b 15437 CEU:1.0;1.0, CHB:0.88;0.774, JPT:0.943;0.89, YRI:1.0;1.0 FUNCTIONAL_SNP rs6089953 chr20 62291008 Intron 5b 18831 CEU:1.0;1.0, CHB:0.895;0.801, JPT:0.945;0.893, YRI:1.0;1.0 FUNCTIONAL_SNP rs2297433 chr20 62293460 Intron 5b 16379 CEU:1.0;1.0, CHB:0.892;0.756, JPT:0.945;0.893, YRI:1.0;1.0 FUNCTIONAL_SNP rs2297438 chr20 62311098 Intron 5b 1259 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.66 FUNCTIONAL_SNP rs2297440 chr20 62312299 Intron 5b 2460 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.947, YRI:1.0;0.66 FUNCTIONAL_SNP rs6010621 chr20 62310872 Intron 5b 1033 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;0.66 FUNCTIONAL_SNP rs2738783 chr20 62308612 Intron 7 1227 CEU:1.0;0.895 LEAD_SNP rs4809324 chr20 62318220 Intron 4 ASSOCIATION 19578366 Glioma (high-grade) 8.69897000434 RTEL1 LEAD_SNP rs2297441 chr20 62327582 Exon,non-coding 4 ASSOCIATION 21297633 Ulcerative colitis 9.69897000434 TNFRSF6B;RTEL1 FUNCTIONAL_SNP rs3208008 chr20 62326110 Coding 5b 1472 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs2236508 chr20 62333115 Intron 2b 5533 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.949, YRI:1.0;1.0 FUNCTIONAL_SNP rs1151622 chr20 62365556 Intron 3a 37974 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.904, YRI:1.0;1.0 FUNCTIONAL_SNP rs1741708 chr20 62372041 Intron 4 44459 CEU:1.0;1.0, CHB:1.0;0.83, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs2427533 chr20 62365866 Intron 4 38284 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.907, YRI:1.0;1.0 FUNCTIONAL_SNP rs1291206 chr20 62329169 Intron 4 1587 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs2257885 chr20 62334220 Intron 4 6638 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.952 FUNCTIONAL_SNP rs2253823 chr20 62372956 Intron 4 45374 CEU:1.0;1.0, CHB:1.0;0.83, JPT:0.947;0.812, YRI:1.0;1.0 FUNCTIONAL_SNP rs1151624 chr20 62369895 Intron 5b 42313 CEU:1.0;1.0, CHB:1.0;0.83, JPT:1.0;0.864, YRI:1.0;1.0 FUNCTIONAL_SNP rs2427530 chr20 62361737 Intron 5b 34155 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.907, YRI:1.0;1.0 FUNCTIONAL_SNP rs6122154 chr20 62359345 Intron 6 31763 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.907, YRI:1.0;1.0 FUNCTIONAL_SNP rs2738758 chr20 62349625 Intron 7 22043 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.907, YRI:1.0;1.0 FUNCTIONAL_SNP rs1758205 chr20 62355756 Intron 7 28174 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.907, YRI:1.0;1.0 LEAD_SNP rs2315008 chr20 62343956 Intron 7 ASSOCIATION 18758464 Inflammatory bowel disease 14.0457574906 ZGPAT FUNCTIONAL_SNP rs6011066 chr20 62364180 Intron 4 20224 CEU:1.0;1.0, CHB:1.0;0.899, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6062504 chr20 62348907 Intron 7 4951 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2315007 chr20 62343845 Intron 7 111 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4809330 chr20 62349586 Intron 6 ASSOCIATION 21102463 Crohn's disease 14.5228787453 ZGPAT FUNCTIONAL_SNP rs6062498 chr20 62339059 Intron 4 10527 CEU:1.0;1.0 FUNCTIONAL_SNP rs6062509 chr20 62362563 Intron 4 12977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6011066 chr20 62364180 Intron 4 14594 CEU:1.0;1.0, CHB:1.0;0.899, JPT:1.0;1.0 FUNCTIONAL_SNP rs6011040 chr20 62337406 Intron 4 12180 CEU:1.0;1.0, CHB:0.949;0.859, JPT:0.947;0.852 FUNCTIONAL_SNP rs2315008 chr20 62343956 Intron 7 5630 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6062504 chr20 62348907 Intron 7 679 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6011058 chr20 62356627 Intron 7 7041 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2315007 chr20 62343845 Intron 7 5741 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs240444 chr21 11002011 Intron 6 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.69897000434 CYCSP41 - BAGE3 LEAD_SNP rs1006899 chr21 15845052 Intergenic 6 ASSOCIATION 19079262 Bone mineral density (spine) 5.22184874962 HSPA13 - SAMSN1 LEAD_SNP rs2229741 chr21 16340289 Coding 5a ASSOCIATION 19734545 Cognitive performance 6.22184874962 NRIP1 LEAD_SNP rs1736135 chr21 16805220 Intergenic 7 ASSOCIATION 20228799 Ulcerative colitis 6.69897000434 NRIP1 - CYCSP42 ASSOCIATION 18587394 Crohn's disease 8.15490195999 NRIP1 - CYCSP42 FUNCTIONAL_SNP rs1297265 chr21 16817051 Intergenic 2b 11831 CEU:0.958;0.882, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736157 chr21 16828235 Intergenic 4 23015 CEU:0.958;0.882, CHB:1.0;0.502, JPT:1.0;0.91 FUNCTIONAL_SNP rs991774 chr21 16811110 Intergenic 5a 5890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs972010 chr21 16807029 Intergenic 5a 1809 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736145 chr21 16811996 Intergenic 5b 6776 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736020 chr21 16812552 Intergenic 5b 7332 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.849 FUNCTIONAL_SNP rs1736015 chr21 16806316 Intergenic 5b 1096 CEU:1.0;0.923, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736144 chr21 16811482 Intergenic 6 6262 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.736 FUNCTIONAL_SNP rs1736018 chr21 16808220 Intergenic 6 3000 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736161 chr21 16833222 Intergenic 6 28002 CEU:0.918;0.843, JPT:1.0;0.91 FUNCTIONAL_SNP rs1297269 chr21 16820081 Intergenic 6 14861 CEU:0.958;0.882, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736148 chr21 16813212 Intergenic 6 7992 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736140 chr21 16809911 Intergenic 7 4691 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736147 chr21 16813053 Intergenic 7 7833 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736023 chr21 16812882 Intergenic 7 7662 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736039 chr21 16834006 Intergenic 7 28786 CEU:0.918;0.843, CHB:1.0;0.502, JPT:1.0;0.91 FUNCTIONAL_SNP rs1297260 chr21 16812599 Intergenic 7 7379 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1297258 chr21 16806709 Intergenic 7 1489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs1297265 chr21 16817051 Intergenic 2b ASSOCIATION 21297633 Ulcerative colitis 12.15490196 NRIP1 - CYCSP42 FUNCTIONAL_SNP rs1736157 chr21 16828235 Intergenic 4 11184 CEU:1.0;1.0, CHB:1.0;0.502, JPT:1.0;0.91, YRI:1.0;0.764 FUNCTIONAL_SNP rs991774 chr21 16811110 Intergenic 5a 5941 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.577 FUNCTIONAL_SNP rs972010 chr21 16807029 Intergenic 5a 10022 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736145 chr21 16811996 Intergenic 5b 5055 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.577 FUNCTIONAL_SNP rs1736020 chr21 16812552 Intergenic 5b 4499 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736015 chr21 16806316 Intergenic 5b 10735 CEU:0.919;0.812, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2823289 chr21 16841195 Intergenic 6 24144 CEU:0.958;0.848, JPT:1.0;0.91 FUNCTIONAL_SNP rs1736144 chr21 16811482 Intergenic 6 5569 CEU:0.958;0.88, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736018 chr21 16808220 Intergenic 6 8831 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736161 chr21 16833222 Intergenic 6 16171 CEU:1.0;0.961, JPT:1.0;0.91, YRI:1.0;0.549 FUNCTIONAL_SNP rs1297269 chr21 16820081 Intergenic 6 3030 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.535 FUNCTIONAL_SNP rs1736148 chr21 16813212 Intergenic 6 3839 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.593 FUNCTIONAL_SNP rs1736135 chr21 16805220 Intergenic 7 11831 CEU:0.958;0.882, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1736140 chr21 16809911 Intergenic 7 7140 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.577 FUNCTIONAL_SNP rs1736147 chr21 16813053 Intergenic 7 3998 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.95;0.54 FUNCTIONAL_SNP rs1736023 chr21 16812882 Intergenic 7 4169 CEU:0.959;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.577 FUNCTIONAL_SNP rs1736039 chr21 16834006 Intergenic 7 16955 CEU:1.0;0.961, CHB:1.0;0.502, JPT:1.0;0.91, YRI:1.0;0.556 FUNCTIONAL_SNP rs1297260 chr21 16812599 Intergenic 7 4452 CEU:0.959;0.883, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.577 FUNCTIONAL_SNP rs1297258 chr21 16806709 Intergenic 7 10342 CEU:0.958;0.882, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs2823357 chr21 16914905 Intergenic 7 ASSOCIATION 21738487 Parkinson's disease 6.22184874962 CYCSP42 - USP25 FUNCTIONAL_SNP rs7276214 chr21 16913874 Intergenic 6 1031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2823455 chr21 17069166 Intergenic 7 ASSOCIATION 19165232 Panic disorder 5.04575749056 CYCSP42 - USP25 LEAD_SNP rs2823819 chr21 17828291 Intron 5b ASSOCIATION 20732626 Attention deficit hyperactivity disorder 6.15490195999 C21orf34 LEAD_SNP rs2823962 chr21 18046232 Intergenic 7 ASSOCIATION 19451621 Amyotrophic lateral sclerosis 5.04575749056 RPS26P5 - RPL39P40 FUNCTIONAL_SNP rs1075080 chr21 18044653 Intergenic 6 1579 CEU:1.0;1.0, CHB:1.0;0.935, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2823956 chr21 18044366 Intergenic 6 1866 CEU:1.0;1.0, CHB:0.938;0.88, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2823960 chr21 18045539 Intergenic 7 693 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2823959 chr21 18045028 Intergenic 7 1204 CEU:1.0;1.0, CHB:1.0;0.94, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2823965 chr21 18046980 Intergenic 7 748 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2825388 chr21 20536649 Intergenic 7 ASSOCIATION 18846501 Attention deficit hyperactivity disorder symptoms (interaction) 5.09691001301 PPIAL3 - SLC6A6P1 FUNCTIONAL_SNP rs2825400 chr21 20548365 Intergenic 6 11716 CEU:1.0;1.0, CHB:1.0;0.947, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1888414 chr21 21777730 Intergenic 7 ASSOCIATION 19668339 Hippocampal atrophy 6.69897000434 FDPSP - KRT18P2 LEAD_SNP rs2826340 chr21 21885302 Intergenic 7 ASSOCIATION 18951430 Attention deficit hyperactivity disorder and conduct disorder 5.69897000434 RPS3AP1 - C21orf131 LEAD_SNP rs11088859 chr21 22689344 Intron 7 ASSOCIATION 21552555 Obesity 7.39794000867 NCAM2 FUNCTIONAL_SNP rs9981130 chr21 22672036 Intron 7 17308 CEU:1.0;1.0 FUNCTIONAL_SNP rs3737412 chr21 22652558 Intron 7 36786 CEU:1.0;1.0, CHB:0.912;0.56, JPT:1.0;0.547 FUNCTIONAL_SNP rs2298578 chr21 22710680 Intron 7 21336 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs3827163 chr21 22705254 Intron 7 15910 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs962789 chr21 22789593 Intron 7 100249 CEU:1.0;1.0 LEAD_SNP rs2826891 chr21 22910116 Intron 7 ASSOCIATION 20834067 Longevity 6.0 NCAM2 FUNCTIONAL_SNP rs2826893 chr21 22912031 Exon,non-coding 5b 1915 CEU:1.0;0.961, CHB:1.0;0.93, JPT:1.0;0.915, YRI:1.0;0.831 FUNCTIONAL_SNP rs2826880 chr21 22904654 Intron 6 5462 CEU:1.0;0.961, CHB:1.0;0.93, JPT:1.0;0.915, YRI:1.0;1.0 LEAD_SNP rs2827312 chr21 23631676 Intron 6 ASSOCIATION 21529783 Alcoholism (heaviness of drinking) 5.09691001301 NCAM2 - MAPK6PS2 LEAD_SNP rs7279441 chr21 24198815 Intergenic 7 ASSOCIATION 20707712 Self-rated health 5.09691001301 MAPK6PS2 - ZNF299P LEAD_SNP rs2828520 chr21 25143119 Intergenic 7 ASSOCIATION 20125088 Major depressive disorder 6.39794000867 TUBAP - VN2R20P FUNCTIONAL_SNP rs2828519 chr21 25142760 Intergenic 6 359 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2828523 chr21 25144264 Intergenic 6 1145 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1964687 chr21 25142373 Intergenic 7 746 CEU:1.0;0.886, CHB:1.0;1.0, JPT:1.0;0.914 FUNCTIONAL_SNP rs207535 chr21 25145431 Intergenic 7 2312 CEU:1.0;0.835, CHB:0.888;0.556, JPT:0.832;0.527 FUNCTIONAL_SNP rs207538 chr21 25145715 Intergenic 7 2596 CEU:1.0;0.842, CHB:0.804;0.545, JPT:0.832;0.527 FUNCTIONAL_SNP rs13046049 chr21 25143941 Intergenic 7 822 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2828521 chr21 25143375 Intergenic 7 256 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.927, YRI:1.0;0.831 LEAD_SNP rs9977253 chr21 26645083 Intron 7 ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 5.30102999566 VN2R20P - RPL13AP7 LEAD_SNP rs17001239 chr21 27002377 Intergenic 6 ASSOCIATION 19734545 Cognitive performance 5.69897000434 MRPL39 - JAM2 LEAD_SNP rs2830840 chr21 28665347 Intergenic 4 ASSOCIATION 19846067 Response to citalopram treatment 5.30102999566 GPX1P2 - EIF4A1P1 LEAD_SNP rs239713 chr21 28696476 Intergenic 6 ASSOCIATION 20932310 AB1-42 6.30102999566 GPX1P2 - EIF4A1P1 LEAD_SNP rs9977499 chr21 28734997 Intron 7 ASSOCIATION 21546767 Dialysis-related mortality 5.39794000867 GPX1P2 - EIF4A1P1 FUNCTIONAL_SNP rs11702106 chr21 28732462 Exon,non-coding 7 2535 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1023381 chr21 28733171 Exon,non-coding 7 1826 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1023383 chr21 28733627 Exon,non-coding 7 1370 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2830872 chr21 28730761 Intergenic 6 4236 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs1817114 chr21 28739553 Intron 6 4556 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2830871 chr21 28730435 Intergenic 6 4562 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.936;0.876 FUNCTIONAL_SNP rs2830869 chr21 28730029 Intergenic 6 4968 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.937 FUNCTIONAL_SNP rs2830881 chr21 28735807 Intron 7 810 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9980089 chr21 28735282 Intron 7 285 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1452093 chr21 28744356 Intron 4 ASSOCIATION 21546767 Dialysis-related mortality 5.69897000434 EIF4A1P1 - RPL10P1 FUNCTIONAL_SNP rs1452094 chr21 28744290 Intron 4 66 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2830893 chr21 28747333 Intron 7 2977 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs9305354 chr21 29475196 Intron 6 ASSOCIATION 17903292 Urinary albumin excretion 5.09691001301 C21orf94 - NCRNA00161 FUNCTIONAL_SNP rs3087735 chr21 29475016 Exon,non-coding 6 180 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.964 FUNCTIONAL_SNP rs9305355 chr21 29475217 Intron 7 21 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6516813 chr21 29470468 Intron 7 4728 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs2831485 chr21 29470831 Intron 7 4365 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.962;0.893 LEAD_SNP rs2832077 chr21 30141021 Intergenic 6 ASSOCIATION 17903297 Cognitive test performance 5.69897000434 NCRNA00161 - N6AMT1 FUNCTIONAL_SNP rs11701777 chr21 30155828 Intergenic 6 14807 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs9983229 chr21 30137674 Intergenic 6 3347 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11701445 chr21 30160807 Intergenic 7 19786 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.8 FUNCTIONAL_SNP rs12329875 chr21 30137796 Intergenic 7 3225 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.89 LEAD_SNP rs363512 chr21 31050817 Intron 7 ASSOCIATION 18821565 Hyperactive-impulsive symptoms 5.39794000867 GRIK1 LEAD_SNP rs458685 chr21 31177511 Intron 5b ASSOCIATION 17903305 Breast cancer 5.22184874962 GRIK1 LEAD_SNP rs9305406 chr21 31386243 Intergenic 6 ASSOCIATION 20339536 Response to statin therapy 5.09691001301 GRIK1AS - CLDN17 LEAD_SNP rs7283316 chr21 32216253 Intergenic 7 ASSOCIATION 21130836 Information processing speed 5.04575749056 KRTAP7-1 - KRTAP11-1 LEAD_SNP rs1475591 chr21 32440540 Intergenic 7 ASSOCIATION 21347282 Coronary heart disease 5.22184874962 UBE3AP2 - TIAM1 LEAD_SNP rs13048019 chr21 32918294 Intron 7 ASSOCIATION 20801718 Amyotrophic lateral sclerosis 7.52287874528 TIAM1 FUNCTIONAL_SNP rs11700615 chr21 32908593 Intron 6 9701 CEU:1.0;0.923 FUNCTIONAL_SNP rs11700792 chr21 32919601 Intron 7 1307 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13050704 chr21 32907800 Intron 7 10494 CEU:1.0;0.923 LEAD_SNP rs2833556 chr21 33285300 Intron 5b ASSOCIATION 21107309 Reasoning 6.30102999566 HUNK LEAD_SNP rs2833607 chr21 33381040 Intergenic 6 ASSOCIATION 19890347 Vitiligo 5.69897000434 HUNK - NCRNA00159 LEAD_SNP rs2833610 chr21 33385186 Intergenic 7 ASSOCIATION 21490949 Type 2 diabetes 5.39794000867 HUNK - NCRNA00159 LEAD_SNP rs9982601 chr21 35599128 Intron 7 ASSOCIATION 21378990 Coronary heart disease 9.39794000867 C21orf82 - KCNE2 ASSOCIATION 19198609 Myocardial infarction (early onset) 10.2218487496 C21orf82 - KCNE2 FUNCTIONAL_SNP rs9305545 chr21 35595821 Intron 4 3307 CEU:1.0;0.857, CHB:1.0;1.0 FUNCTIONAL_SNP rs9978407 chr21 35618638 Intron 5b 19510 CEU:1.0;0.92, CHB:1.0;1.0 FUNCTIONAL_SNP rs10470171 chr21 35652644 Intron 5b 53516 CEU:0.919;0.844, CHB:1.0;1.0 FUNCTIONAL_SNP rs8132042 chr21 35651290 Intron 6 52162 CEU:1.0;0.914, CHB:1.0;1.0 FUNCTIONAL_SNP rs8131284 chr21 35607496 Intron 6 8368 CEU:1.0;0.92, CHB:1.0;1.0 FUNCTIONAL_SNP rs973754 chr21 35633530 Intron 6 34402 CEU:1.0;0.92, CHB:1.0;1.0 FUNCTIONAL_SNP rs7280612 chr21 35633710 Intron 7 34582 CEU:1.0;0.921, CHB:1.0;1.0 FUNCTIONAL_SNP rs7278204 chr21 35621365 Intron 7 22237 CEU:1.0;0.92, CHB:1.0;1.0 FUNCTIONAL_SNP rs7278845 chr21 35637462 Intron 7 38334 CEU:1.0;0.921, CHB:1.0;1.0 LEAD_SNP rs727957 chr21 35880072 Intron 7 ASSOCIATION 20062063 Electrocardiographic traits 11.6989700043 KCNE1 FUNCTIONAL_SNP rs7277610 chr21 35883030 Exon,non-coding 2b 2958 CEU:1.0;1.0 FUNCTIONAL_SNP rs2834498 chr21 35874149 Intron 2b 5923 CEU:1.0;1.0 FUNCTIONAL_SNP rs11701049 chr21 35868144 Intron 6 11928 CEU:1.0;1.0 FUNCTIONAL_SNP rs11701860 chr21 35871440 Intron 7 8632 CEU:1.0;1.0 FUNCTIONAL_SNP rs2051391 chr21 35876438 Intron 7 3634 CEU:1.0;1.0 LEAD_SNP rs2014300 chr21 36357861 Intron 5a ASSOCIATION 21642993 Esophageal cancer 21.096910013 RUNX1 LEAD_SNP rs2834812 chr21 36533662 Intergenic 7 ASSOCIATION 20041166 HIV-1 control 5.04575749056 C21orf96 - RPL34P3 FUNCTIONAL_SNP rs2834807 chr21 36531645 Intergenic 7 2017 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933 FUNCTIONAL_SNP rs2834810 chr21 36531976 Intergenic 7 1686 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933 FUNCTIONAL_SNP rs2834813 chr21 36534120 Intergenic 7 458 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.933 LEAD_SNP rs219780 chr21 37833307 Coding 5b ASSOCIATION 19561606 Kidney stones 11.3979400087 CLDN14 FUNCTIONAL_SNP rs219779 chr21 37833751 Coding 5b 444 CEU:1.0;0.811 FUNCTIONAL_SNP rs219784 chr21 37831867 Intron 4 1440 CEU:1.0;0.853, YRI:1.0;0.832 FUNCTIONAL_SNP rs219777 chr21 37834721 Intron 5b 1414 CEU:1.0;0.867 FUNCTIONAL_SNP rs219788 chr21 37829162 Intron 5b 4145 CEU:1.0;1.0 FUNCTIONAL_SNP rs219789 chr21 37829040 Intron 5b 4267 CEU:1.0;1.0 FUNCTIONAL_SNP rs219793 chr21 37826310 Intron 5b 6997 CEU:1.0;0.921 FUNCTIONAL_SNP rs2835363 chr21 37834914 Intron 5b 1607 CEU:1.0;0.811 FUNCTIONAL_SNP rs219771 chr21 37835501 Intron 5b 2194 CEU:1.0;0.811 FUNCTIONAL_SNP rs219769 chr21 37835675 Intron 6 2368 CEU:1.0;0.811, YRI:1.0;0.575 FUNCTIONAL_SNP rs219773 chr21 37835333 Intron 6 2026 CEU:1.0;0.811 FUNCTIONAL_SNP rs2244034 chr21 37816305 Intron 7 17002 CEU:1.0;0.921 FUNCTIONAL_SNP rs219770 chr21 37835648 Intron 7 2341 CEU:1.0;0.811, YRI:1.0;0.575 FUNCTIONAL_SNP rs219775 chr21 37834944 Intron 7 1637 CEU:1.0;0.867 LEAD_SNP rs1003719 chr21 38491095 Intron 6 ASSOCIATION 20463881 Eye color traits 9.69897000434 TTC3 FUNCTIONAL_SNP rs2154536 chr21 38492147 Intron 6 1052 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs12483205 chr21 38740824 Intron 4 ASSOCIATION 21364930 HIV-1 replication 5.30102999566 DYRK1A LEAD_SNP rs2835810 chr21 38932778 Intergenic 7 ASSOCIATION 20694148 Metabolic syndrome 5.22184874962 DYRK1A - KCNJ6 FUNCTIONAL_SNP rs2835814 chr21 38935651 Intergenic 4 2873 CEU:1.0;1.0, CHB:1.0;0.918, JPT:1.0;0.942, YRI:1.0;0.892 LEAD_SNP rs7275212 chr21 39852551 Intron 7 ASSOCIATION 21738478 White blood cell types 17.6989700043 ERG LEAD_SNP rs743446 chr21 40056423 Intergenic 7 ASSOCIATION 20662065 Neonatal lupus 5.30102999566 ERG - NCRNA00114 FUNCTIONAL_SNP rs8134419 chr21 40057860 Intergenic 6 1437 CEU:1.0;0.888, CHB:1.0;1.0, JPT:0.949;0.859, YRI:0.885;0.728 LEAD_SNP rs1209950 chr21 40173528 Intergenic 4 ASSOCIATION 21079520 Non-small cell lung cancer 6.52287874528 NCRNA00114 - ETS2 LEAD_SNP rs2836754 chr21 40291740 Intron 7 ASSOCIATION 17554261 Crohn's disease 6.30102999566 FLJ45139 - RPL23AP12 FUNCTIONAL_SNP rs7278605 chr21 40292946 Intron 4 1206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2836753 chr21 40291187 Intron 5a 553 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11701004 chr21 40292102 Intron 5b 362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.919, YRI:1.0;0.902 LEAD_SNP rs2836823 chr21 40380249 Intron 7 ASSOCIATION 17158188 Nicotine dependence 5.69897000434 FLJ45139 - RPL23AP12 LEAD_SNP rs2242944 chr21 40465178 Intergenic 5b ASSOCIATION 20062062 Ankylosing spondylitis 19.096910013 FLJ45139 - RPL23AP12 FUNCTIONAL_SNP rs2242945 chr21 40467423 Intergenic 2b 2245 CEU:1.0;1.0, CHB:0.952;0.906, JPT:0.942;0.841, YRI:1.0;1.0 FUNCTIONAL_SNP rs2094871 chr21 40460859 Intergenic 4 4319 CEU:1.0;0.958, CHB:1.0;0.954, JPT:1.0;0.847 FUNCTIONAL_SNP rs2836880 chr21 40466239 Intergenic 6 1061 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.896, YRI:1.0;1.0 LEAD_SNP rs2836878 chr21 40465534 Intergenic 5b ASSOCIATION 21300955 C-reactive protein 6.69897000434 FLJ45139 - RPL23AP12 ASSOCIATION 21297633 Ulcerative colitis 21.6989700043 FLJ45139 - RPL23AP12 ASSOCIATION 18758464 Inflammatory bowel disease 11.3979400087 FLJ45139 - RPL23AP12 FUNCTIONAL_SNP rs9808651 chr21 40466468 Intergenic 3a 934 CEU:1.0;1.0, CHB:1.0;0.927, JPT:1.0;1.0 FUNCTIONAL_SNP rs2836882 chr21 40466570 Intergenic 4 1036 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.888 FUNCTIONAL_SNP rs2836884 chr21 40467643 Intergenic 4 2109 CEU:1.0;1.0, CHB:1.0;0.936, JPT:1.0;0.796 FUNCTIONAL_SNP rs4817986 chr21 40465512 Intergenic 7 22 CEU:1.0;1.0, CHB:0.923;0.793, JPT:1.0;1.0 FUNCTIONAL_SNP rs2836881 chr21 40466299 Intergenic 7 765 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.641 LEAD_SNP rs378108 chr21 40469520 Intergenic 5b ASSOCIATION 21743469 Ankylosing spondylitis 10.6989700043 FLJ45139 - RPL23AP12 LEAD_SNP rs1735151 chr21 41123301 Exon,non-coding 7 ASSOCIATION 21347282 Coronary heart disease 5.04575749056 IGSF5 FUNCTIONAL_SNP rs1734858 chr21 41121586 Intron 6 1715 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs2253748 chr21 41120848 Intron 6 2453 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.879 FUNCTIONAL_SNP rs4816645 chr21 41125001 Intron 7 1700 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs421549 chr21 41122288 Intron 7 1013 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10470189 chr21 41126946 Intron 7 3645 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2253741 chr21 41120677 Intron 7 2624 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.885 FUNCTIONAL_SNP rs7282623 chr21 41129874 Intron 7 6573 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.957;0.877 LEAD_SNP rs9981861 chr21 41415044 Intron 6 ASSOCIATION 21079520 Non-small cell lung cancer 5.39794000867 DSCAM LEAD_SNP rs2837828 chr21 42174960 Intron 7 ASSOCIATION 21507922 Neutrophil count 6.0 DSCAM FUNCTIONAL_SNP rs2837821 chr21 42161844 Intron 7 13116 CEU:1.0;1.0, CHB:0.953;0.907, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2837825 chr21 42166447 Intron 7 8513 CEU:1.0;0.958, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.913 FUNCTIONAL_SNP rs736977 chr21 42168191 Intron 7 6769 CEU:1.0;1.0, CHB:0.951;0.863, JPT:1.0;0.908, YRI:1.0;1.0 LEAD_SNP rs2837960 chr21 42511918 Intergenic 7 ASSOCIATION 17554300 Rheumatoid arthritis 5.69897000434 DSCAM - C21orf130 LEAD_SNP rs7279297 chr21 43227915 Intron 5b ASSOCIATION 19340012 Tanning 5.52287874528 PRDM15 LEAD_SNP rs425215 chr21 43707101 Intron 5b ASSOCIATION 20585627 Common traits (Other) 6.09691001301 ABCG1 LEAD_SNP rs11203203 chr21 43836186 Intron 5b ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 8.0 UBASH3A ASSOCIATION 20453842 Rheumatoid arthritis 5.39794000867 UBASH3A ASSOCIATION 20410501 Vitiligo 9.0 UBASH3A ASSOCIATION 19430480 Type 1 diabetes 8.69897000434 UBASH3A LEAD_SNP rs9976767 chr21 43836390 Intron 5a ASSOCIATION 18840781 Type 1 diabetes 7.69897000434 UBASH3A FUNCTIONAL_SNP rs3788013 chr21 43841328 Intron 4 4938 CEU:0.918;0.842, CHB:1.0;0.942, JPT:1.0;1.0, YRI:1.0;0.962 FUNCTIONAL_SNP rs3761378 chr21 43832918 Intron 5a 3472 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.951, YRI:1.0;0.926 FUNCTIONAL_SNP rs7278547 chr21 43835827 Intron 5b 563 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11702374 chr21 43829758 Intron 6 6632 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs9980448 chr21 43839730 Intron 7 3340 CEU:0.918;0.842, CHB:1.0;0.942, JPT:1.0;1.0, YRI:0.961;0.888 FUNCTIONAL_SNP rs876498 chr21 43841827 Intron 7 5437 CEU:0.918;0.842, CHB:1.0;0.942, JPT:1.0;1.0, YRI:0.961;0.888 LEAD_SNP rs2839619 chr21 44436177 Intron 5b ASSOCIATION 19260141 Biochemical measures 5.09691001301 PKNOX1 ASSOCIATION 19260141 Biochemical measures 5.09691001301 PKNOX1 LEAD_SNP rs234720 chr21 44445292 Intron 5b ASSOCIATION 20125193 Cognitive test performance 6.69897000434 PKNOX1 LEAD_SNP rs2839627 chr21 44448718 Intron 5b ASSOCIATION 21130836 Information processing speed 5.22184874962 PKNOX1 FUNCTIONAL_SNP rs8134050 chr21 44462363 Intergenic 4 13645 CEU:1.0;0.833, CHB:1.0;0.904, JPT:0.89;0.715, YRI:0.954;0.869 FUNCTIONAL_SNP rs2401195 chr21 44466887 Intergenic 5b 18169 CEU:1.0;0.923, CHB:1.0;0.897, JPT:1.0;0.738, YRI:0.953;0.797 FUNCTIONAL_SNP rs8130986 chr21 44459743 Intergenic 5b 11025 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.738, YRI:0.954;0.871 FUNCTIONAL_SNP rs7276681 chr21 44409400 Intron 6 39318 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.738, YRI:1.0;0.956 FUNCTIONAL_SNP rs9984563 chr21 44423653 Intron 7 25065 CEU:1.0;1.0, CHB:1.0;0.904, JPT:1.0;0.738, YRI:1.0;0.956 LEAD_SNP rs6586282 chr21 44478497 Intron 5b ASSOCIATION 20031578 Plasma homocysteine 9.52287874528 CBS LEAD_SNP rs643608 chr21 44768562 Intergenic 5b ASSOCIATION 20708005 Non-alcoholic fatty liver disease histology (other) 6.0 C21orf136 - FLJ41733 LEAD_SNP rs496300 chr21 44779680 Intron 4 ASSOCIATION 20694148 Metabolic syndrome 6.39794000867 C21orf136 - FLJ41733 FUNCTIONAL_SNP rs579870 chr21 44779082 Exon,non-coding 2b 598 CEU:1.0;0.959, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2838519 chr21 45615023 Intergenic 4 ASSOCIATION 21297633 Ulcerative colitis 10.2218487496 C21orf33 - ICOSLG FUNCTIONAL_SNP rs4380337 chr21 45616049 Intergenic 2b 1026 CEU:0.96;0.921, CHB:1.0;0.817, JPT:1.0;0.689 FUNCTIONAL_SNP rs7276302 chr21 45614159 Intergenic 4 864 CEU:1.0;0.962, CHB:1.0;0.817, JPT:1.0;0.689 FUNCTIONAL_SNP rs2070551 chr21 45616672 Intergenic 4 1649 CEU:0.96;0.921, CHB:1.0;0.817, JPT:1.0;0.689 FUNCTIONAL_SNP rs2838517 chr21 45613825 Intergenic 4 1198 CEU:1.0;0.962, CHB:1.0;0.817, JPT:1.0;0.689 FUNCTIONAL_SNP rs743479 chr21 45611950 Intergenic 5b 3073 CEU:1.0;0.962, CHB:1.0;0.778, JPT:1.0;0.689 FUNCTIONAL_SNP rs2838520 chr21 45615896 Intergenic 5b 873 CEU:0.961;0.923, CHB:1.0;0.817, JPT:1.0;0.689 FUNCTIONAL_SNP rs2838521 chr21 45615917 Intergenic 5b 894 CEU:0.961;0.923, CHB:1.0;0.817, JPT:1.0;0.689 FUNCTIONAL_SNP rs3804031 chr21 45629604 Intergenic 5b 14581 CEU:0.916;0.806, CHB:1.0;0.69, JPT:0.917;0.539 FUNCTIONAL_SNP rs762422 chr21 45615638 Intergenic 6 615 CEU:0.961;0.923, CHB:1.0;0.817, JPT:1.0;0.689 FUNCTIONAL_SNP rs762421 chr21 45615561 Intergenic 7 538 CEU:1.0;0.962, CHB:1.0;0.817, JPT:1.0;0.689 FUNCTIONAL_SNP rs7282490 chr21 45615741 Intergenic 7 718 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.935;0.54 LEAD_SNP rs762421 chr21 45615561 Intergenic 7 ASSOCIATION 18587394 Crohn's disease 9.0 C21orf33 - ICOSLG FUNCTIONAL_SNP rs4380337 chr21 45616049 Intergenic 2b 488 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7276302 chr21 45614159 Intergenic 4 1402 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2838520 chr21 45615896 Intergenic 5b 335 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2838521 chr21 45615917 Intergenic 5b 356 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs762422 chr21 45615638 Intergenic 6 77 CEU:1.0;0.962, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4819388 chr21 45647421 Exon,non-coding 4 ASSOCIATION 20190752 Celiac disease 8.69897000434 ICOSLG FUNCTIONAL_SNP rs4818887 chr21 45644950 Exon,non-coding 4 2471 CEU:1.0;0.894, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs6518352 chr21 45646698 Exon,non-coding 5b 723 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.802 FUNCTIONAL_SNP rs7278940 chr21 45648992 Exon,non-coding 5b 1571 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.945, YRI:1.0;1.0 FUNCTIONAL_SNP rs2838532 chr21 45639866 Intergenic 2b 7555 CEU:1.0;0.892, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7283760 chr21 45640629 Intergenic 3a 6792 CEU:1.0;0.894, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2838531 chr21 45638586 Intergenic 4 8835 CEU:1.0;0.893, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs3746963 chr21 45651497 Intron 5b 4076 CEU:1.0;0.944, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.811;0.554 LEAD_SNP rs2075876 chr21 45709153 Intron 5b ASSOCIATION 21505073 Rheumatoid arthritis 8.39794000867 AIRE LEAD_SNP rs2838815 chr21 46629590 Intron 7 ASSOCIATION 17903307 Pulmonary function traits (other) 5.52287874528 ADARB1 FUNCTIONAL_SNP rs377902 chr21 46588620 Intron 5a 40970 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.895 FUNCTIONAL_SNP rs4818766 chr21 46635351 Intron 5a 5761 CEU:1.0;0.88, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.927 FUNCTIONAL_SNP rs367986 chr21 46588104 Intron 5a 41486 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;0.95, YRI:1.0;0.895 FUNCTIONAL_SNP rs1537123 chr21 46598907 Intron 5b 30683 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.925;0.824 FUNCTIONAL_SNP rs412646 chr21 46589203 Intron 5b 40387 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.922;0.818 FUNCTIONAL_SNP rs2838800 chr21 46597837 Intron 7 31753 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs2838806 chr21 46618601 Intron 7 10989 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs2225434 chr21 46634146 Intron 7 4556 CEU:1.0;0.884, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.964 FUNCTIONAL_SNP rs373037 chr21 46591916 Intron 7 37674 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.925;0.824 FUNCTIONAL_SNP rs2246081 chr21 46624349 Intron 7 5241 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.928 FUNCTIONAL_SNP rs421716 chr21 46590422 Intron 7 39168 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs984791 chr21 46598120 Intron 7 31470 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.894 FUNCTIONAL_SNP rs2838813 chr21 46627687 Intron 7 1903 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 LEAD_SNP rs4293630 chr21 47445791 Intergenic 5b ASSOCIATION 21529783 Alcoholism (alcohol dependence factor score) 5.15490195999 COL6A1 - COL6A2 LEAD_SNP rs131654 chr22 21917190 Intron 7 ASSOCIATION 19838193 Systemic lupus erythematosus 16.0 RIMBP3C - UBE2L3 LEAD_SNP rs181359 chr22 21928641 Intron 5a ASSOCIATION 21102463 Crohn's disease 15.3010299957 UBE2L3 FUNCTIONAL_SNP rs2298428 chr22 21982892 Coding 4 54251 CEU:1.0;1.0, CHB:1.0;0.716, JPT:1.0;0.712 FUNCTIONAL_SNP rs7444 chr22 21976934 Exon,non-coding 7 48293 CEU:1.0;1.0, CHB:1.0;0.908, JPT:1.0;0.953 FUNCTIONAL_SNP rs12158299 chr22 21979584 Intergenic 2b 50943 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.907 FUNCTIONAL_SNP rs140489 chr22 21921294 Intron 2b 7347 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs1034329 chr22 21943938 Intron 2b 15297 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2266963 chr22 21947467 Intron 2b 18826 CEU:1.0;1.0, CHB:1.0;0.681, JPT:1.0;0.748 FUNCTIONAL_SNP rs4821124 chr22 21979289 Intergenic 4 50648 CEU:1.0;1.0, CHB:1.0;0.716, JPT:1.0;0.712, YRI:1.0;0.519 FUNCTIONAL_SNP rs4821130 chr22 21980894 Intergenic 4 52253 CEU:1.0;0.922, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs2283790 chr22 21956653 Intron 4 28012 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs5998619 chr22 21945851 Intron 4 17210 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs2298429 chr22 21983260 Intron 4 54619 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs2266961 chr22 21928597 Intron 4 44 CEU:1.0;1.0, CHB:1.0;0.716, JPT:1.0;0.743 FUNCTIONAL_SNP rs140491 chr22 21922364 Intron 4 6277 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs140492 chr22 21923144 Intron 4 5497 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs140498 chr22 21927064 Intron 4 1577 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.9 FUNCTIONAL_SNP rs2266959 chr22 21922904 Intron 4 5737 CEU:1.0;1.0, CHB:1.0;0.681, JPT:1.0;0.748 FUNCTIONAL_SNP rs11089637 chr22 21979096 Intergenic 4 50455 CEU:1.0;0.838, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs181360 chr22 21928916 Intron 4 275 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5754295 chr22 21951740 Intron 5a 23099 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.907 FUNCTIONAL_SNP rs738127 chr22 21968221 Intron 5a 39580 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.907 FUNCTIONAL_SNP rs5998672 chr22 21966442 Intron 5a 37801 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953 FUNCTIONAL_SNP rs140499 chr22 21927231 Intron 5a 1410 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs878825 chr22 21982249 Intergenic 5a 53608 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs9621715 chr22 21942007 Intron 5b 13366 CEU:1.0;1.0, CHB:1.0;0.681, JPT:1.0;0.748 FUNCTIONAL_SNP rs5998599 chr22 21941981 Intron 5b 13340 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs12484550 chr22 21941915 Intron 5b 13274 CEU:1.0;1.0, CHB:1.0;0.681, JPT:1.0;0.748 FUNCTIONAL_SNP rs5754467 chr22 21985094 Intergenic 5b 56453 CEU:1.0;0.923, CHB:1.0;0.868, JPT:1.0;1.0, YRI:0.899;0.808 FUNCTIONAL_SNP rs2070512 chr22 21949411 Intron 5b 20770 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs181362 chr22 21932068 Intron 5b 3427 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs5754217 chr22 21939675 Intron 5b 11034 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs5749502 chr22 21945096 Intron 5b 16455 CEU:1.0;1.0, CHB:1.0;0.681, JPT:1.0;0.748 FUNCTIONAL_SNP rs5754387 chr22 21974703 Intron 6 46062 CEU:1.0;1.0, CHB:0.929;0.541, JPT:0.937;0.628, YRI:1.0;1.0 FUNCTIONAL_SNP rs5754352 chr22 21964951 Intron 6 36310 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.907 FUNCTIONAL_SNP rs11089629 chr22 21958872 Intron 6 30231 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs4821108 chr22 21959038 Intron 6 30397 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5754102 chr22 21916272 Intron 6 12369 CEU:1.0;1.0, CHB:1.0;0.585, JPT:1.0;0.677 FUNCTIONAL_SNP rs4821112 chr22 21964761 Intron 6 36120 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.907 FUNCTIONAL_SNP rs4820091 chr22 21940189 Intron 6 11548 CEU:1.0;0.838, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs4821116 chr22 21973319 Intron 6 44678 CEU:1.0;1.0, CHB:1.0;0.681, JPT:1.0;0.712 FUNCTIONAL_SNP rs5754100 chr22 21916166 Intron 7 12475 CEU:1.0;1.0, CHB:1.0;0.681, JPT:1.0;0.712 FUNCTIONAL_SNP rs131665 chr22 21920903 Intron 7 7738 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;1.0, YRI:1.0;0.907 LEAD_SNP rs5754217 chr22 21939675 Intron 5b ASSOCIATION 21408207 Systemic lupus erythematosus 5.69897000434 UBE2L3 FUNCTIONAL_SNP rs2298428 chr22 21982892 Coding 4 43217 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs7444 chr22 21976934 Exon,non-coding 7 37259 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.953, YRI:1.0;0.738 FUNCTIONAL_SNP rs12158299 chr22 21979584 Intergenic 2b 39909 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs140489 chr22 21921294 Intron 2b 18381 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1034329 chr22 21943938 Intron 2b 4263 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2266963 chr22 21947467 Intron 2b 7792 CEU:1.0;1.0, CHB:1.0;0.714, JPT:1.0;0.748 FUNCTIONAL_SNP rs4821124 chr22 21979289 Intergenic 4 39614 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs4821130 chr22 21980894 Intergenic 4 41219 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs2283790 chr22 21956653 Intron 4 16978 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5998619 chr22 21945851 Intron 4 6176 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2298429 chr22 21983260 Intron 4 43585 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.92;0.757 FUNCTIONAL_SNP rs2266961 chr22 21928597 Intron 4 11078 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.743 FUNCTIONAL_SNP rs140491 chr22 21922364 Intron 4 17311 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs140492 chr22 21923144 Intron 4 16531 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs140498 chr22 21927064 Intron 4 12611 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2266959 chr22 21922904 Intron 4 16771 CEU:1.0;1.0, CHB:1.0;0.714, JPT:1.0;0.748 FUNCTIONAL_SNP rs11089637 chr22 21979096 Intergenic 4 39421 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs181360 chr22 21928916 Intron 4 10759 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5754295 chr22 21951740 Intron 5a 12065 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs738127 chr22 21968221 Intron 5a 28546 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs140499 chr22 21927231 Intron 5a 12444 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5998672 chr22 21966442 Intron 5a 26767 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs878825 chr22 21982249 Intergenic 5a 42574 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.919;0.729 FUNCTIONAL_SNP rs181359 chr22 21928641 Intron 5a 11034 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs9621715 chr22 21942007 Intron 5b 2332 CEU:1.0;1.0, CHB:1.0;0.714, JPT:1.0;0.748 FUNCTIONAL_SNP rs5998599 chr22 21941981 Intron 5b 2306 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12484550 chr22 21941915 Intron 5b 2240 CEU:1.0;1.0, CHB:1.0;0.714, JPT:1.0;0.748 FUNCTIONAL_SNP rs5754467 chr22 21985094 Intergenic 5b 45419 CEU:1.0;0.923, CHB:1.0;0.91, JPT:1.0;1.0 FUNCTIONAL_SNP rs2070512 chr22 21949411 Intron 5b 9736 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs181362 chr22 21932068 Intron 5b 7607 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5749502 chr22 21945096 Intron 5b 5421 CEU:1.0;1.0, CHB:1.0;0.714, JPT:1.0;0.748 FUNCTIONAL_SNP rs5754387 chr22 21974703 Intron 6 35028 CEU:1.0;1.0, CHB:1.0;0.597, JPT:0.937;0.628 FUNCTIONAL_SNP rs5754352 chr22 21964951 Intron 6 25276 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs11089629 chr22 21958872 Intron 6 19197 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.929 FUNCTIONAL_SNP rs4821108 chr22 21959038 Intron 6 19363 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5754102 chr22 21916272 Intron 6 23403 CEU:1.0;1.0, CHB:1.0;0.613, JPT:1.0;0.677 FUNCTIONAL_SNP rs4821112 chr22 21964761 Intron 6 25086 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953 FUNCTIONAL_SNP rs4820091 chr22 21940189 Intron 6 514 CEU:1.0;0.838, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4821116 chr22 21973319 Intron 6 33644 CEU:1.0;1.0, CHB:1.0;0.714, JPT:1.0;0.712 FUNCTIONAL_SNP rs5754100 chr22 21916166 Intron 7 23509 CEU:1.0;1.0, CHB:1.0;0.714, JPT:1.0;0.712 FUNCTIONAL_SNP rs131665 chr22 21920903 Intron 7 18772 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs4821112 chr22 21964761 Intron 6 ASSOCIATION 20139978 Hematological and biochemical traits 8.0 UBE2L3 FUNCTIONAL_SNP rs12158299 chr22 21979584 Intergenic 2b 14823 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1034329 chr22 21943938 Intron 2b 20823 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.907 FUNCTIONAL_SNP rs4821130 chr22 21980894 Intergenic 4 16133 CEU:1.0;0.922, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs2283790 chr22 21956653 Intron 4 8108 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs140491 chr22 21922364 Intron 4 42397 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs140498 chr22 21927064 Intron 4 37697 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 FUNCTIONAL_SNP rs181360 chr22 21928916 Intron 4 35845 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.907 FUNCTIONAL_SNP rs5754295 chr22 21951740 Intron 5a 13021 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs738127 chr22 21968221 Intron 5a 3460 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs140499 chr22 21927231 Intron 5a 37530 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.907 FUNCTIONAL_SNP rs181359 chr22 21928641 Intron 5a 36120 CEU:1.0;1.0, CHB:1.0;0.954, JPT:1.0;0.953, YRI:1.0;0.907 FUNCTIONAL_SNP rs5754352 chr22 21964951 Intron 6 190 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4821108 chr22 21959038 Intron 6 5723 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;0.907 FUNCTIONAL_SNP rs131665 chr22 21920903 Intron 7 43858 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.953, YRI:1.0;1.0 LEAD_SNP rs2298428 chr22 21982892 Coding 4 ASSOCIATION 21383967 Celiac disease and Rheumatoid arthritis 9.52287874528 YDJC ASSOCIATION 20190752 Celiac disease 6.69897000434 YDJC FUNCTIONAL_SNP rs7444 chr22 21976934 Exon,non-coding 7 5958 CEU:1.0;1.0, CHB:1.0;0.78, JPT:1.0;0.747 FUNCTIONAL_SNP rs12158299 chr22 21979584 Intergenic 2b 3308 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.747 FUNCTIONAL_SNP rs140489 chr22 21921294 Intron 2b 61598 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs1034329 chr22 21943938 Intron 2b 38954 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs2266963 chr22 21947467 Intron 2b 35425 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.952, YRI:1.0;0.66 FUNCTIONAL_SNP rs4821124 chr22 21979289 Intergenic 4 3603 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4821130 chr22 21980894 Intergenic 4 1998 CEU:1.0;0.922, CHB:1.0;0.75, JPT:1.0;0.747 FUNCTIONAL_SNP rs2283790 chr22 21956653 Intron 4 26239 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs5998619 chr22 21945851 Intron 4 37041 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs2298429 chr22 21983260 Intron 4 368 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs2266961 chr22 21928597 Intron 4 54295 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;0.743 FUNCTIONAL_SNP rs140491 chr22 21922364 Intron 4 60528 CEU:1.0;1.0, CHB:1.0;0.743, JPT:1.0;0.712 FUNCTIONAL_SNP rs140492 chr22 21923144 Intron 4 59748 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs140498 chr22 21927064 Intron 4 55828 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs2266959 chr22 21922904 Intron 4 59988 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs11089637 chr22 21979096 Intergenic 4 3796 CEU:1.0;0.838, CHB:1.0;0.75, JPT:1.0;0.747 FUNCTIONAL_SNP rs181360 chr22 21928916 Intron 4 53976 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs5754295 chr22 21951740 Intron 5a 31152 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.747 FUNCTIONAL_SNP rs738127 chr22 21968221 Intron 5a 14671 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.747 FUNCTIONAL_SNP rs5998672 chr22 21966442 Intron 5a 16450 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.747 FUNCTIONAL_SNP rs140499 chr22 21927231 Intron 5a 55661 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs878825 chr22 21982249 Intergenic 5a 643 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs181359 chr22 21928641 Intron 5a 54251 CEU:1.0;1.0, CHB:1.0;0.716, JPT:1.0;0.712 FUNCTIONAL_SNP rs9621715 chr22 21942007 Intron 5b 40885 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.952, YRI:1.0;1.0 FUNCTIONAL_SNP rs5998599 chr22 21941981 Intron 5b 40911 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs12484550 chr22 21941915 Intron 5b 40977 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.952, YRI:1.0;0.743 FUNCTIONAL_SNP rs5754467 chr22 21985094 Intergenic 5b 2202 CEU:1.0;0.923, CHB:0.884;0.644, JPT:1.0;0.712 FUNCTIONAL_SNP rs2070512 chr22 21949411 Intron 5b 33481 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs181362 chr22 21932068 Intron 5b 50824 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs5754217 chr22 21939675 Intron 5b 43217 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs5749502 chr22 21945096 Intron 5b 37796 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.952, YRI:1.0;0.743 FUNCTIONAL_SNP rs5754387 chr22 21974703 Intron 6 8189 CEU:1.0;1.0, JPT:1.0;0.509 FUNCTIONAL_SNP rs5754352 chr22 21964951 Intron 6 17941 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.747 FUNCTIONAL_SNP rs11089629 chr22 21958872 Intron 6 24020 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs4821108 chr22 21959038 Intron 6 23854 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs5754102 chr22 21916272 Intron 6 66620 CEU:1.0;1.0, CHB:1.0;0.817, JPT:0.947;0.853, YRI:1.0;1.0 FUNCTIONAL_SNP rs4821112 chr22 21964761 Intron 6 18131 CEU:1.0;1.0, CHB:1.0;0.75, JPT:1.0;0.747 FUNCTIONAL_SNP rs4820091 chr22 21940189 Intron 6 42703 CEU:1.0;0.838, CHB:1.0;0.75, JPT:1.0;0.712 FUNCTIONAL_SNP rs4821116 chr22 21973319 Intron 6 9573 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5754100 chr22 21916166 Intron 7 66726 CEU:1.0;1.0, CHB:1.0;0.952, JPT:0.949;0.901, YRI:1.0;1.0 FUNCTIONAL_SNP rs131665 chr22 21920903 Intron 7 61989 CEU:1.0;1.0, CHB:1.0;0.782, JPT:1.0;0.712 LEAD_SNP rs412050 chr22 22307519 Intergenic 4 ASSOCIATION 18839057 Attention deficit hyperactivity disorder 5.22184874962 PPM1F LEAD_SNP rs5751614 chr22 23593051 Intron 2b ASSOCIATION 18391951 Height 5.22184874962 BCR FUNCTIONAL_SNP rs2267020 chr22 23592442 Intron 4 609 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.96 FUNCTIONAL_SNP rs2283805 chr22 23589942 Intron 5a 3109 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.948, YRI:1.0;1.0 FUNCTIONAL_SNP rs2267018 chr22 23588193 Intron 5b 4858 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 LEAD_SNP rs140174 chr22 23922983 Intergenic 2b ASSOCIATION 21448238 Migraine 5.09691001301 IGLL1 FUNCTIONAL_SNP rs131421 chr22 23921202 Intron 5b 1781 CEU:1.0;0.902, CHB:1.0;0.576, JPT:0.909;0.583 LEAD_SNP rs4820599 chr22 24990213 Intron 5b ASSOCIATION 18940312 Plasma levels of liver enzymes 10.3979400087 GGT1;C22orf36 FUNCTIONAL_SNP rs6519520 chr22 24991895 Intron 4 1682 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5760489 chr22 24990646 Intron 4 433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2154611 chr22 24989920 Intron 4 293 CEU:1.0;1.0, JPT:1.0;0.731, YRI:1.0;0.547 FUNCTIONAL_SNP rs6519519 chr22 24991863 Intron 4 1650 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs874852 chr22 24987964 Intron 5b 2249 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2070477 chr22 24990916 Intron 5b 703 CEU:1.0;0.957, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5760485 chr22 24986473 Intron 5b 3740 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.587 LEAD_SNP rs5751901 chr22 24992266 Intron 5b ASSOCIATION 18464913 Protein quantitative trait loci 6.69897000434 GGT1 LEAD_SNP rs8139900 chr22 26394724 Intron 7 ASSOCIATION 21294900 Serum uric acid 5.39794000867 MYO18B LEAD_SNP rs1001021 chr22 26403599 Intron 6 ASSOCIATION 20713499 Schizophrenia, bipolar disorder and depression (combined) 5.69897000434 MYO18B FUNCTIONAL_SNP rs16986621 chr22 26395302 Intron 6 8297 CEU:1.0;0.866, CHB:1.0;0.754, JPT:1.0;0.66 FUNCTIONAL_SNP rs5752249 chr22 26388706 Intron 7 14893 CEU:1.0;1.0, CHB:1.0;0.806, JPT:1.0;0.781 LEAD_SNP rs688034 chr22 26689635 Intron 7 ASSOCIATION 17554300 Coronary heart disease 5.39794000867 SEZ6L LEAD_SNP rs744016 chr22 27042106 Intergenic 5b ASSOCIATION 20031603 RR interval (heart rate) 5.30102999566 ISCA2P1 - MIAT LEAD_SNP rs5762311 chr22 28090207 Intron 7 ASSOCIATION 21658281 Sudden cardiac arrest 5.15490195999 RPL15P22 - MN1 LEAD_SNP rs5762430 chr22 28378472 Coding 5b ASSOCIATION 21552555 Obesity 6.15490195999 TTC28 FUNCTIONAL_SNP rs5762456 chr22 28427336 Intron 7 48864 CEU:1.0;0.862 FUNCTIONAL_SNP rs5752692 chr22 28480119 Intron 7 101647 CEU:1.0;0.93, CHB:1.0;0.717, JPT:1.0;0.937 LEAD_SNP rs1547014 chr22 29100711 Intron 6 ASSOCIATION 20548946 Vertical cup-disc ratio 8.0 CHEK2 FUNCTIONAL_SNP rs738722 chr22 29130012 Intron 6 29301 CEU:1.0;0.916, CHB:1.0;0.615, YRI:1.0;0.928 FUNCTIONAL_SNP rs5752773 chr22 29105415 Intron 6 4704 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;0.897, YRI:1.0;1.0 FUNCTIONAL_SNP rs4822983 chr22 29115066 Intron 6 14355 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.887, YRI:1.0;0.883 FUNCTIONAL_SNP rs1033667 chr22 29130300 Intron 7 29589 CEU:1.0;0.916, CHB:1.0;0.615, YRI:1.0;0.6 FUNCTIONAL_SNP rs5762760 chr22 29123846 Intron 7 23135 CEU:1.0;0.844 FUNCTIONAL_SNP rs2078555 chr22 29110759 Intron 7 10048 CEU:1.0;1.0, CHB:1.0;0.924, JPT:1.0;0.897, YRI:1.0;0.55 LEAD_SNP rs738722 chr22 29130012 Intron 6 ASSOCIATION 20729852 Esophageal cancer and gastric cancer 8.0 CHEK2 LEAD_SNP rs4823006 chr22 29451671 Exon,non-coding 4 ASSOCIATION 20935629 Waist-hip ratio 10.5228787453 ZNRF3 FUNCTIONAL_SNP rs12321 chr22 29453193 Exon,non-coding 7 1522 CEU:1.0;0.96, CHB:1.0;0.722, JPT:1.0;0.606, YRI:1.0;0.807 FUNCTIONAL_SNP rs3178915 chr22 29453027 Exon,non-coding 7 1356 CEU:1.0;0.822, CHB:1.0;0.828, JPT:1.0;0.724 FUNCTIONAL_SNP rs2179129 chr22 29450923 Exon,non-coding 5b 748 CEU:1.0;0.924, CHB:1.0;0.688, JPT:1.0;0.613 FUNCTIONAL_SNP rs2294239 chr22 29449477 Intron 4 2194 CEU:1.0;0.961, CHB:1.0;0.688, JPT:1.0;0.606 LEAD_SNP rs13053817 chr22 29847722 Intergenic 7 ASSOCIATION 20009918 Carotid atherosclerosis in HIV infection 5.69897000434 RFPL1 - NEFH FUNCTIONAL_SNP rs16987627 chr22 29835060 Coding 7 12662 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.911;0.762 FUNCTIONAL_SNP rs12484086 chr22 29837884 Coding 7 9838 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.559 FUNCTIONAL_SNP rs13053624 chr22 29838203 Exon,non-coding 7 9519 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.559 FUNCTIONAL_SNP rs12485237 chr22 29837286 Exon,non-coding 6 10436 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2106107 chr22 29835987 Exon,non-coding 7 11735 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.659, YRI:1.0;0.559 FUNCTIONAL_SNP rs13054354 chr22 29840180 Intergenic 4 7542 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.559 FUNCTIONAL_SNP rs13340033 chr22 29846339 Intergenic 5b 1383 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs13057382 chr22 29850334 Intergenic 5b 2612 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12484045 chr22 29828751 Intergenic 6 18971 CEU:1.0;0.941, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.741;0.548 FUNCTIONAL_SNP rs13055707 chr22 29851172 Intergenic 6 3450 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs13056528 chr22 29829333 Intergenic 7 18389 CEU:1.0;0.932, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.7 FUNCTIONAL_SNP rs12484859 chr22 29844884 Intergenic 7 2838 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7287166 chr22 29843932 Intergenic 7 3790 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs36600 chr22 30337586 Intron 5b ASSOCIATION 21725308 Lung cancer 12.2218487496 MTMR3 LEAD_SNP rs2412971 chr22 30494371 Intron 6 ASSOCIATION 21399633 Nephropathy 8.69897000434 HORMAD2 FUNCTIONAL_SNP rs713875 chr22 30592487 Intron 4 98116 CEU:1.0;0.923, CHB:1.0;0.747, JPT:1.0;0.807, YRI:0.937;0.614 FUNCTIONAL_SNP rs714027 chr22 30577771 Intergenic 5a 83400 CEU:1.0;0.961, CHB:1.0;0.952, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs4823074 chr22 30512478 Intron 5b 18107 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5997579 chr22 30537526 Intron 6 43155 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4823077 chr22 30545149 Intron 6 50778 CEU:1.0;1.0, CHB:1.0;0.952, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs1003342 chr22 30570022 Intron 6 75651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.946, YRI:1.0;1.0 FUNCTIONAL_SNP rs2412970 chr22 30486826 Intron 6 7545 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2412973 chr22 30529631 Intron 6 35260 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;0.896 FUNCTIONAL_SNP rs6006356 chr22 30503171 Intron 7 8800 CEU:1.0;1.0, CHB:1.0;0.948, JPT:1.0;0.942, YRI:1.0;1.0 FUNCTIONAL_SNP rs5763767 chr22 30493882 Intron 7 489 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs757024 chr22 30471679 Intron 7 22692 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2412973 chr22 30529631 Intron 6 ASSOCIATION 19915574 Inflammatory bowel disease (early onset) 8.69897000434 HORMAD2 FUNCTIONAL_SNP rs713875 chr22 30592487 Intron 4 62856 CEU:1.0;0.923, CHB:1.0;0.752, JPT:0.882;0.7, YRI:0.828;0.534 FUNCTIONAL_SNP rs714027 chr22 30577771 Intergenic 5a 48140 CEU:1.0;0.961, CHB:1.0;0.953, JPT:0.943;0.842, YRI:1.0;0.896 FUNCTIONAL_SNP rs4823074 chr22 30512478 Intron 5b 17153 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.897, YRI:1.0;0.896 FUNCTIONAL_SNP rs5997579 chr22 30537526 Intron 6 7895 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.897, YRI:1.0;0.896 FUNCTIONAL_SNP rs4823077 chr22 30545149 Intron 6 15518 CEU:1.0;1.0, CHB:1.0;0.953, JPT:1.0;0.947, YRI:1.0;0.896 FUNCTIONAL_SNP rs1003342 chr22 30570022 Intron 6 40391 CEU:1.0;1.0, CHB:1.0;1.0, JPT:0.943;0.842, YRI:1.0;0.896 FUNCTIONAL_SNP rs2412970 chr22 30486826 Intron 6 42805 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;0.896 FUNCTIONAL_SNP rs2412971 chr22 30494371 Intron 6 35260 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;0.896 FUNCTIONAL_SNP rs6006356 chr22 30503171 Intron 7 26460 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;0.84, YRI:1.0;0.895 FUNCTIONAL_SNP rs5763767 chr22 30493882 Intron 7 35749 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;0.896 FUNCTIONAL_SNP rs757024 chr22 30471679 Intron 7 57952 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.897, YRI:1.0;0.896 LEAD_SNP rs5753037 chr22 30581722 Intron 5b ASSOCIATION 19430480 Type 1 diabetes 15.5228787453 RPS3AP51 - LIF FUNCTIONAL_SNP rs41173 chr22 30424863 Exon,non-coding 5b 156859 CEU:1.0;0.961, CHB:1.0;0.908, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs5763751 chr22 30460434 Intron 2b 121288 CEU:1.0;0.961, CHB:1.0;0.953, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs2412976 chr22 30567907 Intron 6 13815 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5753025 chr22 30542157 Intron 6 39565 CEU:1.0;0.961, CHB:1.0;1.0, JPT:0.948;0.899, YRI:1.0;1.0 FUNCTIONAL_SNP rs41176 chr22 30432403 Intron 6 149319 CEU:1.0;0.961, CHB:1.0;0.908, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs2899147 chr22 30533065 Intron 7 48657 CEU:1.0;0.961, CHB:1.0;1.0, JPT:0.948;0.898, YRI:1.0;1.0 FUNCTIONAL_SNP rs4820830 chr22 30531091 Intron 7 50631 CEU:1.0;0.961, CHB:1.0;0.953, JPT:0.948;0.899, YRI:1.0;1.0 FUNCTIONAL_SNP rs1548389 chr22 30573552 Intergenic 7 8170 CEU:1.0;0.961, CHB:1.0;0.908, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1989870 chr22 30472254 Intron 7 109468 CEU:1.0;0.961, CHB:1.0;0.953, JPT:1.0;0.95, YRI:1.0;1.0 FUNCTIONAL_SNP rs4336042 chr22 30552511 Intron 7 29211 CEU:1.0;0.961, CHB:1.0;1.0, JPT:1.0;0.95, YRI:1.0;1.0 LEAD_SNP rs2412980 chr22 30592069 Intron 4 ASSOCIATION 21546767 Dialysis-related mortality 5.39794000867 RPS3AP51 - LIF LEAD_SNP rs713875 chr22 30592487 Intron 4 ASSOCIATION 21102463 Crohn's disease 11.15490196 RPS3AP51 - LIF FUNCTIONAL_SNP rs714027 chr22 30577771 Intergenic 5a 14716 CEU:1.0;0.887, CHB:1.0;0.789, JPT:1.0;0.853, YRI:0.937;0.614 FUNCTIONAL_SNP rs4823074 chr22 30512478 Intron 5b 80009 CEU:1.0;0.923, CHB:0.942;0.701, JPT:1.0;0.807, YRI:0.937;0.614 FUNCTIONAL_SNP rs2412971 chr22 30494371 Intron 6 98116 CEU:1.0;0.923, CHB:1.0;0.747, JPT:1.0;0.807, YRI:0.937;0.614 FUNCTIONAL_SNP rs5997579 chr22 30537526 Intron 6 54961 CEU:1.0;0.923, CHB:1.0;0.789, JPT:1.0;0.807, YRI:0.937;0.614 FUNCTIONAL_SNP rs4823077 chr22 30545149 Intron 6 47338 CEU:1.0;0.923, CHB:1.0;0.789, JPT:0.939;0.752, YRI:0.937;0.614 FUNCTIONAL_SNP rs2412970 chr22 30486826 Intron 6 105661 CEU:1.0;0.923, CHB:1.0;0.752, JPT:1.0;0.807, YRI:0.937;0.614 FUNCTIONAL_SNP rs2412973 chr22 30529631 Intron 6 62856 CEU:1.0;0.923, CHB:1.0;0.752, JPT:0.882;0.7, YRI:0.828;0.534 FUNCTIONAL_SNP rs1003342 chr22 30570022 Intron 6 22465 CEU:1.0;0.923, CHB:1.0;0.752, JPT:1.0;0.853, YRI:0.937;0.614 FUNCTIONAL_SNP rs6006356 chr22 30503171 Intron 7 89316 CEU:1.0;0.919, CHB:0.937;0.683, JPT:1.0;0.752, YRI:0.936;0.609 FUNCTIONAL_SNP rs757024 chr22 30471679 Intron 7 120808 CEU:1.0;0.923, CHB:1.0;0.752, JPT:1.0;0.807, YRI:0.937;0.614 FUNCTIONAL_SNP rs5763767 chr22 30493882 Intron 7 98605 CEU:1.0;0.923, CHB:1.0;0.752, JPT:1.0;0.807, YRI:0.937;0.614 LEAD_SNP rs2106294 chr22 31645759 Intron 4 ASSOCIATION 21150874 Diabetic nephropathy 5.39794000867 LIMK2 LEAD_SNP rs1012068 chr22 32265903 Intron 7 ASSOCIATION 21725309 Chronic Hepatitis C infection 13.0 DEPDC5 FUNCTIONAL_SNP rs5998152 chr22 32263162 Intron 5b 2741 CEU:0.947;0.853, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.89 LEAD_SNP rs5998432 chr22 32745916 Intergenic 7 ASSOCIATION 20932310 T-tau 6.04575749056 CPSF1P1 - RFPL3 LEAD_SNP rs9609565 chr22 32867528 Intergenic 6 ASSOCIATION 19820697 Hematological parameters 9.39794000867 BPIL2 - FBXO7 FUNCTIONAL_SNP rs9606958 chr22 32864879 Intergenic 7 2649 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9609562 chr22 32860792 Intergenic 7 6736 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9609564 chr22 32865533 Intergenic 7 1995 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs9621532 chr22 33084511 Intron 5b ASSOCIATION 21665990 Age-related macular degeneration 14.6989700043 SYN3 ASSOCIATION 20385819 Age-related macular degeneration 11.0 SYN3 ASSOCIATION 20385826 Age-related macular degeneration 8.39794000867 SYN3 FUNCTIONAL_SNP rs756481 chr22 33105227 Intron 5b 20716 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs5754223 chr22 33104058 Intron 5b 19547 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs5754224 chr22 33104103 Intron 5b 19592 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5754225 chr22 33104168 Intron 5b 19657 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5754206 chr22 33074351 Intron 6 10160 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs9621528 chr22 33070304 Intron 7 14207 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12170368 chr22 33111247 Intron 7 26736 CEU:1.0;1.0 FUNCTIONAL_SNP rs5754198 chr22 33062231 Intron 7 22280 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5754221 chr22 33103455 Intron 7 18944 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.891 FUNCTIONAL_SNP rs5749498 chr22 33106947 Intron 7 22436 CEU:1.0;1.0, CHB:1.0;1.0 LEAD_SNP rs130575 chr22 34859793 Intergenic 7 ASSOCIATION 18821565 Attention deficit hyperactivity disorder 5.30102999566 LARGE - ISX FUNCTIONAL_SNP rs130576 chr22 34860584 Intergenic 7 791 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs4821469 chr22 36616445 Intergenic 5a ASSOCIATION 20532800 End-stage renal disease (non-diabetic) 18.6989700043 APOL4 - APOL2 LEAD_SNP rs2239785 chr22 36661330 Coding 7 ASSOCIATION 20668430 Glomerulosclerosis 12.3010299957 APOL1 FUNCTIONAL_SNP rs136174 chr22 36661536 Coding 7 206 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs136175 chr22 36661566 Coding 6 236 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs136176 chr22 36661646 Coding 7 316 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs136177 chr22 36661842 Coding 6 512 CEU:1.0;1.0, CHB:1.0;0.933, JPT:1.0;1.0 FUNCTIONAL_SNP rs78523 chr22 36663248 Exon,non-coding 5b 1918 CEU:0.951;0.904, CHB:0.903;0.598, JPT:0.902;0.813 FUNCTIONAL_SNP rs136165 chr22 36659571 Intron 3a 1759 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs80424 chr22 36659299 Intron 5b 2031 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs713929 chr22 36657596 Intron 5b 3734 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs136160 chr22 36657119 Intron 5b 4211 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.793 FUNCTIONAL_SNP rs136163 chr22 36657628 Intron 5b 3702 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs136178 chr22 36664339 Intergenic 5b 3009 CEU:1.0;0.952, CHB:0.895;0.539 FUNCTIONAL_SNP rs136168 chr22 36660842 Intron 6 488 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.606 FUNCTIONAL_SNP rs129423 chr22 36657329 Intron 7 4001 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs136159 chr22 36657023 Intron 7 4307 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs735854 chr22 36679058 Intron 5b ASSOCIATION 20395239 Optic disc size (rim) 5.04575749056 MYH9 FUNCTIONAL_SNP rs136187 chr22 36672276 Intergenic 6 6782 CEU:0.951;0.862, CHB:1.0;0.946, JPT:1.0;0.92 FUNCTIONAL_SNP rs136196 chr22 36675150 Intergenic 7 3908 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.842 LEAD_SNP rs855791 chr22 37462936 Coding 5b ASSOCIATION 21149283 Serum markers of iron status 14.6989700043 TMPRSS6 ASSOCIATION 20927387 Red blood cell traits 8.30102999566 TMPRSS6 ASSOCIATION 20927387 Red blood cell traits 12.0 TMPRSS6 ASSOCIATION 20858683 Glycated hemoglobin levels 13.5228787453 TMPRSS6 ASSOCIATION 19820699 Serum markers of iron status 10.0 TMPRSS6 ASSOCIATION 19820699 Serum markers of iron status 6.30102999566 TMPRSS6 ASSOCIATION 19820698 Hemoglobin 12.6989700043 TMPRSS6 ASSOCIATION 19862010 Hemoglobin 24.5228787453 TMPRSS6 FUNCTIONAL_SNP rs4820268 chr22 37469591 Coding 5b 6655 CEU:1.0;0.883, CHB:0.951;0.864, JPT:0.899;0.808 FUNCTIONAL_SNP rs2413450 chr22 37470224 Intron 5b 7288 CEU:1.0;0.883, CHB:0.951;0.864, JPT:0.948;0.856 FUNCTIONAL_SNP rs760719 chr22 37460449 Intergenic 5b 2487 CEU:1.0;0.883, CHB:0.953;0.908, JPT:0.948;0.856 LEAD_SNP rs5756506 chr22 37467392 Intron 5b ASSOCIATION 19820697 Hematological parameters 9.0 TMPRSS6 FUNCTIONAL_SNP rs2235321 chr22 37462926 Coding 5b 4466 CEU:0.956;0.84, CHB:0.947;0.78, JPT:0.95;0.903 FUNCTIONAL_SNP rs228129 chr22 37428599 Intergenic 2b 38793 CEU:1.0;0.882, CHB:0.854;0.73, JPT:0.95;0.903 FUNCTIONAL_SNP rs135167 chr22 37429129 Intergenic 2b 38263 CEU:1.0;0.856 FUNCTIONAL_SNP rs25095 chr22 37434028 Intergenic 5b 33364 CEU:1.0;0.856, CHB:0.861;0.741, JPT:0.952;0.907 FUNCTIONAL_SNP rs5756505 chr22 37467354 Intron 5b 38 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5756504 chr22 37467270 Intron 5b 122 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0 FUNCTIONAL_SNP rs130619 chr22 37436348 Intergenic 5b 31044 CEU:1.0;0.856, CHB:0.861;0.741, JPT:0.951;0.905 FUNCTIONAL_SNP rs877908 chr22 37464624 Intron 5b 2768 CEU:1.0;0.882, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs130618 chr22 37435443 Intergenic 6 31949 CEU:1.0;0.856, CHB:0.861;0.741, JPT:0.952;0.907 FUNCTIONAL_SNP rs130624 chr22 37438651 Intergenic 6 28741 CEU:1.0;0.847, CHB:0.854;0.73, JPT:0.95;0.903 LEAD_SNP rs4820268 chr22 37469591 Coding 5b ASSOCIATION 21208937 Serum iron levels 10.3979400087 TMPRSS6 ASSOCIATION 20927387 Red blood cell traits 12.0 TMPRSS6 ASSOCIATION 19880490 Serum iron levels 8.30102999566 TMPRSS6 ASSOCIATION 19853236 Hematology traits 9.52287874528 TMPRSS6 ASSOCIATION 19853236 Hematology traits 11.3979400087 TMPRSS6 ASSOCIATION 19084217 Serum markers of iron status 5.22184874962 TMPRSS6 FUNCTIONAL_SNP rs855791 chr22 37462936 Coding 5b 6655 CEU:1.0;0.883, CHB:0.951;0.864, JPT:0.899;0.808 FUNCTIONAL_SNP rs2413450 chr22 37470224 Intron 5b 633 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs760719 chr22 37460449 Intergenic 5b 9142 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;0.952 LEAD_SNP rs2413450 chr22 37470224 Intron 5b ASSOCIATION 19862010 Hematocrit 12.6989700043 TMPRSS6 ASSOCIATION 19862010 Mean corpuscular hemoglobin 33.0457574906 TMPRSS6 ASSOCIATION 19862010 Mean corpuscular volume 40.5228787453 TMPRSS6 FUNCTIONAL_SNP rs4820268 chr22 37469591 Coding 5b 633 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.952 FUNCTIONAL_SNP rs855791 chr22 37462936 Coding 5b 7288 CEU:1.0;0.883, CHB:0.951;0.864, JPT:0.948;0.856 FUNCTIONAL_SNP rs760719 chr22 37460449 Intergenic 5b 9775 CEU:1.0;1.0, CHB:1.0;0.955, JPT:1.0;1.0 LEAD_SNP rs2284033 chr22 37534034 Intron 5b ASSOCIATION 20860503 Asthma 8.0 IL2RB LEAD_SNP rs743777 chr22 37551607 Intergenic 4 ASSOCIATION 21653640 Rheumatoid arthritis 5.69897000434 IL2RB - C1QTNF6 ASSOCIATION 17554300 Rheumatoid arthritis 6.0 IL2RB - C1QTNF6 FUNCTIONAL_SNP rs743776 chr22 37551487 Intergenic 2b 120 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs229489 chr22 37557962 Intergenic 2b 6355 CEU:0.952;0.864, YRI:0.958;0.789 FUNCTIONAL_SNP rs229484 chr22 37554839 Intergenic 4 3232 CEU:0.953;0.907, YRI:1.0;0.928 FUNCTIONAL_SNP rs5995388 chr22 37554699 Intergenic 5b 3092 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs929022 chr22 37553725 Intergenic 5b 2118 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs743779 chr22 37552237 Intergenic 6 630 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs229483 chr22 37553619 Intergenic 7 2012 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;0.877 FUNCTIONAL_SNP rs5995389 chr22 37555046 Intergenic 7 3439 CEU:1.0;0.953, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs229527 chr22 37581485 Coding 5b ASSOCIATION 20410501 Vitiligo 15.6989700043 C1QTNF6 FUNCTIONAL_SNP rs229528 chr22 37581677 Intron 5b 192 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;0.95, YRI:0.918;0.842 FUNCTIONAL_SNP rs229540 chr22 37591290 Intron 7 9805 CEU:1.0;0.96, CHB:1.0;0.92, JPT:1.0;0.903 FUNCTIONAL_SNP rs229541 chr22 37591318 Intron 7 9833 CEU:1.0;1.0, CHB:1.0;0.92, JPT:1.0;0.857 LEAD_SNP rs229541 chr22 37591318 Intron 7 ASSOCIATION 19430480 Type 1 diabetes 6.69897000434 C1QTNF6 - SSTR3 ASSOCIATION 18978792 Type 1 diabetes 7.69897000434 C1QTNF6 - SSTR3 FUNCTIONAL_SNP rs229540 chr22 37591290 Intron 7 28 CEU:1.0;0.96, CHB:1.0;1.0, JPT:1.0;0.949, YRI:1.0;1.0 LEAD_SNP rs13053175 chr22 37613309 Intergenic 7 ASSOCIATION 20834067 Longevity 6.0 RPL39P41 - RAC2 LEAD_SNP rs9607469 chr22 37919267 Intergenic 6 ASSOCIATION 21307088 Optic disc parameters 11.5228787453 CARD10 - CDC42EP1 FUNCTIONAL_SNP rs9610775 chr22 37906262 Coding 5b 13005 CEU:0.897;0.805, JPT:0.921;0.652 FUNCTIONAL_SNP rs1534913 chr22 37918672 Intergenic 4 595 CEU:1.0;0.855, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6000755 chr22 37908190 Intron 4 11077 CEU:1.0;0.897, CHB:1.0;0.737, JPT:1.0;0.76 LEAD_SNP rs2284063 chr22 38544298 Intron 4 ASSOCIATION 19578364 Melanoma 8.69897000434 PLA2G6 ASSOCIATION 19578365 Cutaneous nevi 7.52287874528 PLA2G6 FUNCTIONAL_SNP rs9622746 chr22 38564041 Exon,non-coding 4 19743 CEU:0.91;0.828, CHB:1.0;0.613, JPT:1.0;0.533 FUNCTIONAL_SNP rs2413506 chr22 38593128 Intergenic 3a 48830 CEU:1.0;0.871, CHB:0.924;0.794, JPT:1.0;0.927 FUNCTIONAL_SNP rs738321 chr22 38568833 Intron 4 24535 CEU:1.0;0.916, CHB:1.0;0.931, JPT:1.0;1.0, YRI:0.867;0.561 FUNCTIONAL_SNP rs5750547 chr22 38546700 Intron 4 2402 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.915;0.672 FUNCTIONAL_SNP rs3761446 chr22 38595483 Intergenic 4 51185 CEU:1.0;0.871, CHB:0.924;0.794, JPT:1.0;0.927 FUNCTIONAL_SNP rs9622726 chr22 38506688 Intergenic 4 37610 CEU:0.91;0.828, CHB:1.0;0.613 FUNCTIONAL_SNP rs2267371 chr22 38577119 Intron 4 32821 CEU:0.954;0.871, CHB:1.0;0.863, JPT:1.0;0.927 FUNCTIONAL_SNP rs3788536 chr22 38534209 Intron 4 10089 CEU:0.955;0.912, CHB:1.0;0.613 FUNCTIONAL_SNP rs4821754 chr22 38581503 Intergenic 5a 37205 CEU:1.0;0.871, CHB:1.0;0.863, JPT:1.0;0.927 FUNCTIONAL_SNP rs4821740 chr22 38514423 Intron 5b 29875 CEU:0.953;0.832, CHB:1.0;0.613 FUNCTIONAL_SNP rs4821747 chr22 38538856 Intron 5b 5442 CEU:0.954;0.871, CHB:1.0;0.613 FUNCTIONAL_SNP rs4821751 chr22 38564457 Intron 5b 20159 CEU:1.0;0.916, CHB:1.0;0.931, JPT:1.0;1.0, YRI:0.925;0.857 FUNCTIONAL_SNP rs2235345 chr22 38518177 Intron 5b 26121 CEU:0.953;0.908, CHB:1.0;0.657 FUNCTIONAL_SNP rs4820314 chr22 38518538 Intron 5b 25760 CEU:0.955;0.912, CHB:1.0;0.613 FUNCTIONAL_SNP rs4820315 chr22 38518731 Intron 5b 25567 CEU:0.955;0.912, CHB:1.0;0.613 FUNCTIONAL_SNP rs4820317 chr22 38543287 Intron 5b 1011 CEU:0.954;0.871, CHB:1.0;0.613 FUNCTIONAL_SNP rs3788534 chr22 38533971 Intron 5b 10327 CEU:0.955;0.912, CHB:1.0;0.613 FUNCTIONAL_SNP rs3788535 chr22 38534045 Intron 5b 10253 CEU:0.955;0.912, CHB:1.0;0.613 FUNCTIONAL_SNP rs6001026 chr22 38545363 Intron 6 1065 CEU:0.955;0.912, CHB:1.0;0.613, JPT:1.0;0.533 FUNCTIONAL_SNP rs6001029 chr22 38555193 Intron 6 10895 CEU:1.0;1.0, CHB:1.0;0.863, JPT:1.0;1.0, YRI:0.924;0.823 FUNCTIONAL_SNP rs5750546 chr22 38542499 Intron 6 1799 CEU:1.0;1.0, CHB:1.0;0.652 FUNCTIONAL_SNP rs6001027 chr22 38545619 Intron 7 1321 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5756932 chr22 38546118 Intron 7 1820 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.859 FUNCTIONAL_SNP rs6001031 chr22 38556260 Intron 7 11962 CEU:1.0;0.916, CHB:1.0;0.863, JPT:1.0;1.0, YRI:0.922;0.791 FUNCTIONAL_SNP rs4820321 chr22 38579569 Intergenic 7 35271 CEU:1.0;0.956, CHB:1.0;0.863, JPT:1.0;0.927, YRI:0.946;0.517 FUNCTIONAL_SNP rs5756926 chr22 38542613 Intron 7 1685 CEU:0.953;0.909, CHB:0.894;0.535 FUNCTIONAL_SNP rs6001020 chr22 38538246 Intron 7 6052 CEU:0.954;0.871, CHB:0.896;0.541 FUNCTIONAL_SNP rs5750549 chr22 38547172 Intron 7 2874 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.915;0.672 LEAD_SNP rs738322 chr22 38569006 Intron 4 ASSOCIATION 21478494 Cutaneous nevi 6.0 PLA2G6 FUNCTIONAL_SNP rs2016755 chr22 38539604 Intron 2a 29402 CEU:0.96;0.885, CHB:1.0;0.712, YRI:0.863;0.712 FUNCTIONAL_SNP rs133024 chr22 38574066 Intron 2b 5060 CEU:1.0;0.962, CHB:1.0;1.0, JPT:0.937;0.784, YRI:0.857;0.645 FUNCTIONAL_SNP rs133015 chr22 38572526 Intron 4 3520 CEU:1.0;0.884, JPT:1.0;0.588 FUNCTIONAL_SNP rs133016 chr22 38572582 Intron 4 3576 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.845;0.621 FUNCTIONAL_SNP rs133017 chr22 38572637 Intron 4 3631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.857;0.645 FUNCTIONAL_SNP rs2413503 chr22 38568944 Intron 4 62 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.953;0.83 FUNCTIONAL_SNP rs2092180 chr22 38571563 Intron 4 2557 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.855;0.615 FUNCTIONAL_SNP rs2277844 chr22 38577515 Intron 4 8509 CEU:1.0;0.888, JPT:1.0;0.588 FUNCTIONAL_SNP rs84473 chr22 38557326 Intron 4 11680 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:0.865;0.749 FUNCTIONAL_SNP rs75387 chr22 38572057 Intron 4 3051 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.855;0.615 FUNCTIONAL_SNP rs4375 chr22 38539041 Intron 5b 29965 CEU:0.96;0.885, CHB:1.0;0.72, YRI:0.859;0.705 FUNCTIONAL_SNP rs9619724 chr22 38517880 Intron 5b 51126 CEU:0.96;0.886, CHB:1.0;0.72 FUNCTIONAL_SNP rs133012 chr22 38570721 Intron 5b 1715 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.834;0.573 FUNCTIONAL_SNP rs133021 chr22 38573338 Intron 5b 4332 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943 FUNCTIONAL_SNP rs4382 chr22 38570842 Intron 5b 1836 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.851;0.606 FUNCTIONAL_SNP rs4385 chr22 38573229 Intron 5b 4223 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.857;0.645 FUNCTIONAL_SNP rs11570734 chr22 38518622 Intron 5b 50384 CEU:0.96;0.885, CHB:1.0;0.72 FUNCTIONAL_SNP rs11914181 chr22 38602140 Intron 5b 33134 CEU:0.959;0.849 FUNCTIONAL_SNP rs132985 chr22 38563471 Intron 5b 5535 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.907;0.754 FUNCTIONAL_SNP rs4383 chr22 38570927 Intron 7 1921 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.943, YRI:0.838;0.582 FUNCTIONAL_SNP rs132941 chr22 38545942 Intron 7 23064 CEU:1.0;0.918, CHB:1.0;0.903, JPT:0.939;0.882 FUNCTIONAL_SNP rs2076116 chr22 38517405 Intron 7 51601 CEU:0.959;0.85, CHB:1.0;0.72 LEAD_SNP rs1014971 chr22 39332623 Intergenic 5a ASSOCIATION 20972438 Bladder cancer 11.096910013 CBX6 - APOBEC3A FUNCTIONAL_SNP rs17000526 chr22 39331346 Intergenic 4 1277 CEU:1.0;0.958, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs2413583 chr22 39659773 Intergenic 7 ASSOCIATION 21102463 Crohn's disease 26.0 PDGFB - RPL3 FUNCTIONAL_SNP rs2143178 chr22 39660829 Intergenic 5b 1056 CEU:1.0;1.0, CHB:1.0;0.741, YRI:1.0;0.881 FUNCTIONAL_SNP rs9611133 chr22 39664833 Intergenic 5b 5060 CEU:1.0;0.838, CHB:1.0;0.741, YRI:0.954;0.769 LEAD_SNP rs968451 chr22 39670851 Intergenic 5b ASSOCIATION 21399635 Primary biliary cirrhosis 9.0 PDGFB - RPL3 FUNCTIONAL_SNP rs5757609 chr22 39707845 Intergenic 2b 36994 CEU:1.0;0.885, CHB:1.0;0.946, JPT:1.0;0.811 FUNCTIONAL_SNP rs5757610 chr22 39707979 Intergenic 2b 37128 CEU:1.0;0.89, CHB:1.0;0.841, JPT:1.0;0.811 FUNCTIONAL_SNP rs5757611 chr22 39708357 Intergenic 3a 37506 CEU:1.0;0.89, CHB:1.0;0.946, JPT:1.0;0.811 FUNCTIONAL_SNP rs5757584 chr22 39662550 Intergenic 4 8301 CEU:1.0;0.883, CHB:0.943;0.842, JPT:1.0;0.811, YRI:1.0;0.802 FUNCTIONAL_SNP rs2076125 chr22 39711351 Intron 4 40500 CEU:1.0;0.89, CHB:1.0;0.946, JPT:1.0;0.811 FUNCTIONAL_SNP rs17000962 chr22 39680187 Intergenic 4 9336 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.897 FUNCTIONAL_SNP rs5750784 chr22 39664180 Intergenic 5b 6671 CEU:1.0;1.0, CHB:0.943;0.842, JPT:1.0;0.811, YRI:1.0;1.0 FUNCTIONAL_SNP rs971964 chr22 39702473 Intergenic 5b 31622 CEU:1.0;1.0, CHB:1.0;0.946, JPT:1.0;0.676 FUNCTIONAL_SNP rs12627761 chr22 39724137 Intergenic 5b 53286 CEU:1.0;0.89, CHB:1.0;0.893, JPT:0.882;0.698 FUNCTIONAL_SNP rs12627970 chr22 39721745 Intergenic 5b 50894 CEU:1.0;0.89, CHB:1.0;0.893, JPT:1.0;0.811 FUNCTIONAL_SNP rs1569495 chr22 39665142 Intergenic 5b 5709 CEU:1.0;1.0, CHB:0.943;0.842, JPT:1.0;0.811, YRI:1.0;1.0 FUNCTIONAL_SNP rs11704615 chr22 39696834 Intergenic 5b 25983 CEU:1.0;0.937, CHB:1.0;0.94, JPT:1.0;0.796 FUNCTIONAL_SNP rs11703434 chr22 39698915 Intergenic 6 28064 CEU:1.0;1.0, CHB:1.0;0.941, JPT:1.0;0.811 LEAD_SNP rs54211 chr22 39687484 Intergenic 5b ASSOCIATION 21658281 Sudden cardiac arrest 6.09691001301 PDGFB - RPL3 FUNCTIONAL_SNP rs137623 chr22 39712981 Exon,non-coding 4 25497 CEU:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs137625 chr22 39714908 Intron 2b 27424 CEU:1.0;1.0 FUNCTIONAL_SNP rs126230 chr22 39712314 Intron 4 24830 CEU:1.0;1.0, YRI:1.0;0.792 FUNCTIONAL_SNP rs137666 chr22 39735378 Intergenic 5b 47894 CEU:1.0;0.89 FUNCTIONAL_SNP rs137608 chr22 39696887 Intergenic 5b 9403 CEU:1.0;1.0 FUNCTIONAL_SNP rs137610 chr22 39697793 Intergenic 5b 10309 CEU:1.0;1.0 FUNCTIONAL_SNP rs137580 chr22 39677741 Intergenic 5b 9743 CEU:1.0;1.0 FUNCTIONAL_SNP rs137629 chr22 39717233 Intergenic 7 29749 CEU:1.0;1.0 FUNCTIONAL_SNP rs137663 chr22 39734668 Intergenic 7 47184 CEU:1.0;0.89 LEAD_SNP rs9623117 chr22 40452119 Intron 5b ASSOCIATION 19117981 Prostate cancer 6.30102999566 TNRC6B FUNCTIONAL_SNP rs6001749 chr22 40475326 Intron 5a 23207 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7290298 chr22 40453964 Intron 5a 1845 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6001734 chr22 40443219 Intron 5b 8900 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6001728 chr22 40434757 Intergenic 6 17362 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9607685 chr22 40479811 Intron 7 27692 CEU:1.0;0.843, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7292602 chr22 40479484 Intron 7 27365 CEU:1.0;0.885, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs12484776 chr22 40652873 Intron 6 ASSOCIATION 21460842 Uterine fibroids 11.5228787453 TNRC6B FUNCTIONAL_SNP rs733381 chr22 40669648 Intron 4 16775 CEU:1.0;0.856, CHB:1.0;1.0, JPT:1.0;0.952, YRI:1.0;0.849 FUNCTIONAL_SNP rs4821939 chr22 40659251 Intron 4 6378 CEU:1.0;0.861, CHB:1.0;1.0, JPT:0.948;0.854, YRI:1.0;1.0 FUNCTIONAL_SNP rs12484951 chr22 40703075 Intron 6 50202 CEU:1.0;0.834, CHB:0.92;0.846, JPT:1.0;0.938, YRI:1.0;1.0 LEAD_SNP rs139909 chr22 40697581 Intron 2b ASSOCIATION 19570815 Height 6.69897000434 TNRC6B LEAD_SNP rs5757949 chr22 40820151 Intron 5b ASSOCIATION 19570815 Height 5.39794000867 MKL1 LEAD_SNP rs7364180 chr22 42218856 Intron 4 ASSOCIATION 21123754 Alzheimer's disease biomarkers 6.0 CCDC134 FUNCTIONAL_SNP rs2269657 chr22 42264269 Intron 7 45413 CEU:1.0;1.0, CHB:1.0;0.943, JPT:0.948;0.856 LEAD_SNP rs5759167 chr22 43500212 Intergenic 2b ASSOCIATION 21743057 Prostate cancer 5.0 RPS25P10 - BIK ASSOCIATION 19767753 Prostate cancer 28.2218487496 RPS25P10 - BIK LEAD_SNP rs742134 chr22 43518275 Intron 5b ASSOCIATION 21743057 Prostate cancer 5.22184874962 BIK FUNCTIONAL_SNP rs5759182 chr22 43539651 Intergenic 4 21376 CEU:1.0;1.0, CHB:1.0;0.897, JPT:1.0;1.0, YRI:0.933;0.595 FUNCTIONAL_SNP rs4988372 chr22 43506635 Intergenic 4 11640 CEU:1.0;0.913, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs9612011 chr22 43521950 Intron 4 3675 CEU:1.0;1.0 FUNCTIONAL_SNP rs5751435 chr22 43513156 Intron 5b 5119 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2413748 chr22 43530982 Intron 5b 12707 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.519 FUNCTIONAL_SNP rs4988366 chr22 43505695 Intergenic 5b 12580 CEU:0.912;0.831, CHB:1.0;0.897, JPT:1.0;1.0 FUNCTIONAL_SNP rs760699 chr22 43523188 Intron 5b 4913 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.932;0.764 FUNCTIONAL_SNP rs742136 chr22 43518822 Intron 5b 547 CEU:1.0;1.0, CHB:1.0;0.888, JPT:1.0;1.0, YRI:1.0;0.88 FUNCTIONAL_SNP rs1318001 chr22 43533756 Intron 6 15481 CEU:0.904;0.818 FUNCTIONAL_SNP rs872842 chr22 43530631 Intron 7 12356 CEU:1.0;0.918, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.519 LEAD_SNP rs738409 chr22 44324727 Coding 5b ASSOCIATION 21423719 Nonalcoholic fatty liver disease 33.3979400087 PNPLA3 LEAD_SNP rs2281135 chr22 44332570 Intron 7 ASSOCIATION 18940312 Plasma levels of liver enzymes 15.096910013 PNPLA3 FUNCTIONAL_SNP rs3761472 chr22 44368122 Coding 5b 35552 CEU:1.0;0.874, CHB:0.949;0.901, JPT:0.948;0.816, YRI:1.0;0.875 FUNCTIONAL_SNP rs2294916 chr22 44340922 Intron 5b 8352 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs4823179 chr22 44341193 Intron 5b 8623 CEU:1.0;0.832 FUNCTIONAL_SNP rs2072905 chr22 44333479 Intron 5b 909 CEU:1.0;1.0 FUNCTIONAL_SNP rs1883349 chr22 44331943 Intron 5b 627 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2235777 chr22 44378809 Intron 6 46239 CEU:1.0;0.813, CHB:0.947;0.852, JPT:0.948;0.816 FUNCTIONAL_SNP rs2072907 chr22 44332653 Intron 6 83 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2235776 chr22 44377999 Intron 7 45429 CEU:1.0;0.813, CHB:0.947;0.852, JPT:0.948;0.816 FUNCTIONAL_SNP rs2896019 chr22 44333694 Intron 7 1124 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs926633 chr22 44337533 Intron 7 4963 CEU:1.0;1.0, CHB:1.0;0.949, JPT:1.0;1.0, YRI:1.0;0.874 FUNCTIONAL_SNP rs1474745 chr22 44349236 Intergenic 7 16666 CEU:1.0;0.933, CHB:0.947;0.852, JPT:0.946;0.775, YRI:1.0;0.875 FUNCTIONAL_SNP rs4823108 chr22 44381340 Intron 7 48770 CEU:1.0;0.804, CHB:0.947;0.852, JPT:0.948;0.816 FUNCTIONAL_SNP rs2073081 chr22 44335744 Intron 7 3174 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs1010023 chr22 44336098 Intron 7 3528 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.875 FUNCTIONAL_SNP rs1010022 chr22 44336310 Intron 7 3740 CEU:1.0;1.0, CHB:1.0;0.95, JPT:1.0;1.0, YRI:1.0;0.875 LEAD_SNP rs9615362 chr22 46795141 Intron 5b ASSOCIATION 20595579 Longevity 8.04575749056 CELSR1 FUNCTIONAL_SNP rs6007891 chr22 46756833 Exon,non-coding 5b 38308 CEU:0.911;0.83 FUNCTIONAL_SNP rs9615364 chr22 46797503 Intron 2b 2362 CEU:1.0;1.0 FUNCTIONAL_SNP rs9615969 chr22 46773592 Intron 2b 21549 CEU:1.0;1.0 FUNCTIONAL_SNP rs9615955 chr22 46743931 Intron 5b 51210 CEU:1.0;0.826 FUNCTIONAL_SNP rs9615956 chr22 46749634 Intron 5b 45507 CEU:1.0;0.878 FUNCTIONAL_SNP rs9615960 chr22 46752307 Intron 5b 42834 CEU:0.911;0.83 FUNCTIONAL_SNP rs9615975 chr22 46780673 Intron 5b 14468 CEU:1.0;1.0 FUNCTIONAL_SNP rs9615979 chr22 46789021 Intron 5b 6120 CEU:1.0;1.0 FUNCTIONAL_SNP rs9615980 chr22 46791143 Intron 5b 3998 CEU:1.0;0.906 FUNCTIONAL_SNP rs9615989 chr22 46803774 Intron 5b 8633 CEU:1.0;1.0 FUNCTIONAL_SNP rs9627450 chr22 46807234 Intron 5b 12093 CEU:1.0;1.0 FUNCTIONAL_SNP rs11090872 chr22 46781498 Intron 5b 13643 CEU:1.0;1.0 FUNCTIONAL_SNP rs11090871 chr22 46781441 Intron 5b 13700 CEU:1.0;1.0 FUNCTIONAL_SNP rs7284664 chr22 46807698 Intron 5b 12557 CEU:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs738444 chr22 46721088 Intron 6 74053 CEU:1.0;0.877 FUNCTIONAL_SNP rs9615990 chr22 46804154 Intron 7 9013 CEU:1.0;1.0 FUNCTIONAL_SNP rs8140573 chr22 46800363 Intron 7 5222 CEU:1.0;1.0 LEAD_SNP rs5766691 chr22 47532396 Intron 5b ASSOCIATION 20834067 Longevity 6.0 TBC1D22A FUNCTIONAL_SNP rs738665 chr22 47529157 Intron 4 3239 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs5766693 chr22 47532641 Intron 5b 245 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4823469 chr22 47532014 Intron 5b 382 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4823597 chr22 47531320 Intron 5b 1076 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs5766687 chr22 47528634 Intron 5b 3762 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.888 LEAD_SNP rs9627183 chr22 48284514 Intergenic 7 ASSOCIATION 18821564 Attention deficit hyperactivity disorder 5.52287874528 TBC1D22A - FAM19A5 LEAD_SNP rs6009824 chr22 50086373 Intergenic 4 ASSOCIATION 21273288 Natriuretic peptide levels 5.15490195999 C22orf34 - RPL5P35 FUNCTIONAL_SNP rs6009822 chr22 50085731 Intergenic 3a 642 CEU:1.0;1.0, CHB:1.0;0.534, YRI:0.961;0.857 FUNCTIONAL_SNP rs6009820 chr22 50085456 Intergenic 4 917 CEU:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs6009823 chr22 50086334 Intergenic 4 39 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11090995 chr22 50085210 Intergenic 5b 1163 CEU:1.0;1.0, YRI:1.0;0.924 LEAD_SNP rs28372448 chr22 50350971 Intergenic 5b ASSOCIATION 21668797 Cannabis dependence 5.09691001301 CRELD2 - PIM3 LEAD_SNP rs5771069 chr22 50435480 Coding 5b ASSOCIATION 21297633 Ulcerative colitis 6.69897000434 IL17REL ASSOCIATION 20228798 Ulcerative colitis 7.39794000867 IL17REL FUNCTIONAL_SNP rs137848 chr22 50440296 Intron 4 4816 CEU:0.959;0.884, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.766 FUNCTIONAL_SNP rs137856 chr22 50444484 Intron 5b 9004 CEU:0.958;0.848, CHB:0.952;0.907, JPT:1.0;0.908 FUNCTIONAL_SNP rs137862 chr22 50446550 Intron 5b 11070 CEU:0.956;0.808, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs137864 chr22 50446988 Intron 5b 11508 CEU:0.958;0.848, CHB:1.0;0.954, JPT:1.0;1.0 FUNCTIONAL_SNP rs137834 chr22 50426987 Intergenic 5b 8493 CEU:1.0;0.924, CHB:1.0;1.0, JPT:1.0;0.952, YRI:0.908;0.572 FUNCTIONAL_SNP rs137845 chr22 50439430 Intron 5b 3950 CEU:0.959;0.884, CHB:1.0;0.954, JPT:1.0;1.0, YRI:1.0;0.963 FUNCTIONAL_SNP rs5771222 chr22 50445704 Intron 5b 10224 CEU:0.958;0.848, CHB:0.951;0.863, JPT:1.0;0.953 LEAD_SNP rs470119 chr22 50966914 Intron 4 ASSOCIATION 20139978 Hematological and biochemical traits 7.39794000867 TYMP LEAD_SNP rs131794 chr22 50971752 Intergenic 7 ASSOCIATION 19862010 Mean corpuscular volume 15.0 ODF3B FUNCTIONAL_SNP rs131816 chr22 50957462 Intron 5b 14290 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.84;0.583 FUNCTIONAL_SNP rs3091397 chr22 50957520 Intron 5b 14232 CEU:1.0;0.874, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs5770917 chr22 51017353 Intron 5b ASSOCIATION 18820697 Narcolepsy 7.22184874962 CHKB;CPT1B FUNCTIONAL_SNP rs2269381 chr22 51020069 Intron 5b 2716 CEU:1.0;1.0, CHB:1.0;0.869, JPT:0.917;0.842, YRI:1.0;1.0 FUNCTIONAL_SNP rs2269382 chr22 51018911 Intron 5b 1558 CEU:1.0;1.0, CHB:1.0;0.869, JPT:1.0;0.85, YRI:1.0;1.0 FUNCTIONAL_SNP rs5770911 chr22 51011241 Intron 5b 6112 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.927, YRI:1.0;1.0 LEAD_SNP rs9616906 chr22 51104680 Intergenic 7 ASSOCIATION 20834067 Longevity 6.0 ARSA - SHANK3 LEAD_SNP rs4129148 chrX 990180 Intergenic 6 ASSOCIATION 17522711 Schizophrenia 6.39794000867 - LEAD_SNP rs5916687 chrX 4596138 Intergenic 7 ASSOCIATION 19734901 Amyotrophic lateral sclerosis 5.52287874528 RPL24P9 - NLGN4X LEAD_SNP rs7885458 chrX 6220474 Intergenic 3a ASSOCIATION 19260141 Biochemical measures 5.52287874528 NLGN4X - RPS5P8 FUNCTIONAL_SNP rs1840485 chrX 6219033 Intergenic 7 1441 CEU:1.0;1.0, CHB:1.0;0.819, JPT:1.0;1.0, YRI:1.0;0.953 FUNCTIONAL_SNP rs5961981 chrX 6224772 Intergenic 7 4298 CEU:1.0;1.0, CHB:1.0;0.841, JPT:1.0;0.839, YRI:0.901;0.812 LEAD_SNP rs7892812 chrX 8394253 Intergenic 7 ASSOCIATION 19734545 Cognitive performance 5.09691001301 VCX2 - VCX3B FUNCTIONAL_SNP rs12559019 chrX 8390383 Intergenic 6 3870 CEU:1.0;1.0, CHB:1.0;0.918, JPT:1.0;1.0, YRI:1.0;0.935 LEAD_SNP rs12388359 chrX 10231691 Intron 6 ASSOCIATION 19581569 Alcohol dependence 5.39794000867 CLCN4 - MID1 FUNCTIONAL_SNP rs7050817 chrX 10230919 Exon,non-coding 7 772 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.754 FUNCTIONAL_SNP rs5934817 chrX 10203188 Exon,non-coding 7 28503 CEU:1.0;0.913, CHB:1.0;0.819, JPT:1.0;1.0 FUNCTIONAL_SNP rs3833 chrX 10205581 Exon,non-coding 7 26110 CEU:1.0;0.829, CHB:1.0;0.819, JPT:1.0;1.0 FUNCTIONAL_SNP rs5934830 chrX 10227871 Intron 5b 3820 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6654737 chrX 10229801 Intron 6 1890 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.547 FUNCTIONAL_SNP rs12396065 chrX 10229816 Intron 6 1875 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.854 FUNCTIONAL_SNP rs7050546 chrX 10236001 Intron 6 4310 CEU:1.0;0.907, CHB:1.0;0.724, JPT:1.0;0.905, YRI:1.0;0.748 FUNCTIONAL_SNP rs6639006 chrX 10226233 Intron 6 5458 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7053877 chrX 10227365 Intron 6 4326 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.547 FUNCTIONAL_SNP rs5934828 chrX 10226433 Intron 7 5258 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.754 FUNCTIONAL_SNP rs5934829 chrX 10226730 Intron 7 4961 CEU:1.0;0.913, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.524 LEAD_SNP rs5934953 chrX 11048692 Intron 7 ASSOCIATION 19734545 Cognitive performance 7.0 MID1 - HCCS LEAD_SNP rs5979785 chrX 12971524 Intergenic 7 ASSOCIATION 20190752 Celiac disease 7.22184874962 TLR8 - TMSB4X FUNCTIONAL_SNP rs9779120 chrX 12979436 Intergenic 2b 7912 CEU:1.0;0.847, CHB:0.872;0.513, JPT:1.0;1.0 FUNCTIONAL_SNP rs882814 chrX 12968647 Intergenic 2b 2877 CEU:1.0;0.859, CHB:1.0;0.813, JPT:0.88;0.629 FUNCTIONAL_SNP rs1947953 chrX 12967890 Intergenic 4 3634 CEU:1.0;0.859, CHB:1.0;0.813, JPT:0.88;0.629 FUNCTIONAL_SNP rs936666 chrX 12974606 Intergenic 4 3082 CEU:1.0;0.847, CHB:0.871;0.512, JPT:1.0;1.0, YRI:0.804;0.607 FUNCTIONAL_SNP rs9284569 chrX 12976535 Intergenic 7 5011 CEU:1.0;0.847, CHB:0.872;0.513, JPT:1.0;1.0 LEAD_SNP rs12559632 chrX 22160992 Intron 7 ASSOCIATION 21326311 F-cell distribution 5.52287874528 PHEX LEAD_SNP rs5925696 chrX 22892077 Intron 6 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.52287874528 ZNF645 - DDX53 LEAD_SNP rs5944185 chrX 25853614 Intergenic 7 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.15490195999 ARX - MAGEB18 LEAD_SNP rs5971305 chrX 28233053 Intergenic 6 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.09691001301 DCAF8L1 - IL1RAPL1 FUNCTIONAL_SNP rs2387381 chrX 28188395 Intergenic 6 44658 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.824 FUNCTIONAL_SNP rs10856388 chrX 28173034 Intergenic 6 60019 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.818 FUNCTIONAL_SNP rs5926535 chrX 28146969 Intergenic 7 86084 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.899, YRI:1.0;0.81 FUNCTIONAL_SNP rs5926544 chrX 28183495 Intergenic 7 49558 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.824 FUNCTIONAL_SNP rs2051763 chrX 28216402 Intergenic 7 16651 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.824 FUNCTIONAL_SNP rs9887422 chrX 28163054 Intergenic 7 69999 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.824 FUNCTIONAL_SNP rs993493 chrX 28204962 Intergenic 7 28091 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.824 FUNCTIONAL_SNP rs2029705 chrX 28178902 Intergenic 7 54151 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.824 FUNCTIONAL_SNP rs1908172 chrX 28141825 Intergenic 7 91228 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.899, YRI:1.0;0.824 LEAD_SNP rs7890572 chrX 29640818 Intron 7 ASSOCIATION 20838585 Cardiovascular disease risk factors 7.0 IL1RAPL1 FUNCTIONAL_SNP rs4076956 chrX 29645714 Intron 3a 4896 CEU:1.0;1.0 FUNCTIONAL_SNP rs7879517 chrX 29680927 Intron 4 40109 CEU:1.0;1.0 FUNCTIONAL_SNP rs7883399 chrX 29635574 Intron 5b 5244 CEU:1.0;1.0 FUNCTIONAL_SNP rs4829120 chrX 29652995 Intron 5b 12177 CEU:1.0;1.0 FUNCTIONAL_SNP rs5972557 chrX 29666490 Intron 5b 25672 CEU:1.0;1.0 FUNCTIONAL_SNP rs7051233 chrX 29647078 Intron 6 6260 CEU:1.0;1.0 FUNCTIONAL_SNP rs7056388 chrX 29664027 Intron 7 23209 CEU:1.0;1.0 FUNCTIONAL_SNP rs7052954 chrX 29691517 Intron 7 50699 CEU:1.0;1.0 LEAD_SNP rs872690 chrX 37854727 Intron 5b ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.04575749056 CXorf27 - SYTL5 LEAD_SNP rs3027409 chrX 43607033 Intergenic 5b ASSOCIATION 19247474 Smoking behavior 5.15490195999 MAOA - MAOB LEAD_SNP rs6610953 chrX 44400186 Intron 6 ASSOCIATION 18957941 Personality dimensions 5.22184874962 FUNDC1 FUNCTIONAL_SNP rs5906991 chrX 44403443 Intergenic 4 3257 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs6611365 chrX 47174276 Intergenic 6 ASSOCIATION 20395239 Optic disc size (disc) 6.39794000867 NICN2P - ZNF157 LEAD_SNP rs1934179 chrX 50182184 Intron 7 ASSOCIATION 21113153 Hypospadias 20.5228787453 DGKK FUNCTIONAL_SNP rs4143304 chrX 50146570 Exon,non-coding 6 35614 CEU:0.943;0.89, CHB:1.0;0.934, JPT:1.0;0.914, YRI:1.0;0.924 FUNCTIONAL_SNP rs2211122 chrX 50202750 Intron 3a 20566 CEU:1.0;1.0, JPT:1.0;0.676, YRI:1.0;0.778 FUNCTIONAL_SNP rs5961181 chrX 50175855 Intron 4 6329 CEU:0.943;0.89, CHB:1.0;0.934, JPT:1.0;0.914 FUNCTIONAL_SNP rs1934177 chrX 50191591 Intron 4 9407 CEU:1.0;1.0, CHB:1.0;0.698, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10218009 chrX 50190729 Intron 5a 8545 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4826631 chrX 50171428 Intron 5b 10756 CEU:0.941;0.837, CHB:1.0;0.934, JPT:1.0;0.914 FUNCTIONAL_SNP rs4826630 chrX 50148706 Intron 6 33478 CEU:0.943;0.89, CHB:1.0;0.934, JPT:1.0;0.914, YRI:1.0;0.924 FUNCTIONAL_SNP rs4826632 chrX 50197261 Intron 6 15077 CEU:1.0;1.0, CHB:1.0;0.673, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7885207 chrX 50196395 Intron 6 14211 CEU:1.0;1.0, CHB:1.0;0.698, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs9969978 chrX 50168305 Intron 6 13879 CEU:0.941;0.837, CHB:1.0;0.934, JPT:1.0;0.914 FUNCTIONAL_SNP rs7876567 chrX 50211741 Intron 6 29557 CEU:1.0;1.0, JPT:1.0;0.603 FUNCTIONAL_SNP rs1934168 chrX 50197934 Intron 6 15750 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1934169 chrX 50197526 Intron 6 15342 CEU:1.0;1.0, CHB:1.0;0.698, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1934172 chrX 50194696 Intron 6 12512 CEU:1.0;1.0, CHB:1.0;0.932, JPT:1.0;1.0, YRI:1.0;0.924 FUNCTIONAL_SNP rs1934176 chrX 50193908 Intron 6 11724 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1934183 chrX 50181014 Intron 6 1170 CEU:1.0;0.944, CHB:1.0;0.934, JPT:1.0;0.845 FUNCTIONAL_SNP rs12171755 chrX 50179749 Intron 6 2435 CEU:1.0;0.944, CHB:1.0;0.924, JPT:1.0;1.0 FUNCTIONAL_SNP rs1934189 chrX 50149208 Intron 6 32976 CEU:0.943;0.89, CHB:1.0;0.934, JPT:1.0;0.914, YRI:1.0;0.924 FUNCTIONAL_SNP rs7053160 chrX 50142909 Intron 6 39275 CEU:0.943;0.89, CHB:1.0;0.934, JPT:0.908;0.757, YRI:1.0;0.924 FUNCTIONAL_SNP rs7064725 chrX 50209162 Intron 6 26978 CEU:1.0;1.0, JPT:1.0;0.603 FUNCTIONAL_SNP rs4826629 chrX 50144889 Intron 7 37295 CEU:0.941;0.837, CHB:1.0;0.934, JPT:0.908;0.757 FUNCTIONAL_SNP rs4301550 chrX 50192866 Intron 7 10682 CEU:1.0;0.945, CHB:1.0;0.698, JPT:1.0;1.0 FUNCTIONAL_SNP rs9969946 chrX 50168356 Intron 7 13828 CEU:0.943;0.89, CHB:1.0;0.934, JPT:1.0;0.914 FUNCTIONAL_SNP rs12011426 chrX 50187206 Intron 7 5022 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs11091748 chrX 50157984 Intron 7 24200 CEU:0.943;0.89, CHB:1.0;0.934, JPT:1.0;0.914 FUNCTIONAL_SNP rs1890600 chrX 50185225 Intron 7 3041 CEU:1.0;0.945, CHB:1.0;0.934, JPT:1.0;1.0 FUNCTIONAL_SNP rs10126471 chrX 50165647 Intron 7 16537 CEU:0.939;0.831, CHB:1.0;0.934, JPT:1.0;0.914 FUNCTIONAL_SNP rs5961183 chrX 50205755 Intron 7 23571 CEU:1.0;1.0, JPT:1.0;0.676 FUNCTIONAL_SNP rs1934171 chrX 50194710 Intron 7 12526 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1934173 chrX 50194583 Intron 7 12399 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1934175 chrX 50194282 Intron 7 12098 CEU:1.0;1.0, CHB:1.0;0.934, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1934178 chrX 50191235 Intron 7 9051 CEU:1.0;0.945, CHB:1.0;0.698, JPT:1.0;1.0 FUNCTIONAL_SNP rs1934188 chrX 50149245 Intron 7 32939 CEU:0.94;0.834, CHB:1.0;0.934, JPT:1.0;0.914 FUNCTIONAL_SNP rs1934190 chrX 50143965 Intron 7 38219 CEU:0.943;0.89, CHB:1.0;0.934, JPT:0.908;0.757 FUNCTIONAL_SNP rs1934191 chrX 50143590 Intron 7 38594 CEU:0.943;0.89, CHB:1.0;0.934, JPT:0.905;0.692, YRI:1.0;0.924 FUNCTIONAL_SNP rs4554617 chrX 50203402 Intron 7 21218 CEU:1.0;1.0, JPT:1.0;0.676 FUNCTIONAL_SNP rs6521850 chrX 50202534 Intron 7 20350 CEU:1.0;1.0, CHB:1.0;0.774, JPT:1.0;1.0, YRI:1.0;0.922 FUNCTIONAL_SNP rs7058226 chrX 50226867 Intergenic 7 44683 CEU:1.0;0.824, JPT:1.0;0.545 LEAD_SNP rs1327301 chrX 51210057 Intergenic 7 ASSOCIATION 19767753 Prostate cancer 9.69897000434 CXorf67 - NUDT11 FUNCTIONAL_SNP rs4907792 chrX 51248783 Exon,non-coding 4 38726 CEU:1.0;0.893, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5945607 chrX 51199708 Intergenic 4 10349 CEU:1.0;0.838, CHB:1.0;0.656, JPT:1.0;0.842 FUNCTIONAL_SNP rs11798651 chrX 51201595 Intergenic 5b 8462 CEU:1.0;0.834, CHB:1.0;0.656, JPT:1.0;0.842, YRI:0.92;0.603 FUNCTIONAL_SNP rs1936036 chrX 51310821 Intergenic 5b 100764 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0 FUNCTIONAL_SNP rs5945606 chrX 51191157 Intergenic 5b 18900 CEU:1.0;0.838, CHB:1.0;0.656, JPT:1.0;0.842 FUNCTIONAL_SNP rs1361837 chrX 51313064 Intergenic 5b 103007 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs5987397 chrX 51242303 Intergenic 6 32246 CEU:1.0;0.893, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7064708 chrX 51342435 Intergenic 6 132378 CEU:1.0;0.843, CHB:1.0;0.738, JPT:1.0;1.0, YRI:1.0;0.673 FUNCTIONAL_SNP rs1936037 chrX 51310376 Intergenic 6 100319 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs1541238 chrX 51343635 Intergenic 6 133578 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0, YRI:1.0;0.634 FUNCTIONAL_SNP rs1327304 chrX 51214176 Intergenic 6 4119 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5945572 chrX 51229683 Intergenic 6 19626 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.507 FUNCTIONAL_SNP rs5945609 chrX 51202466 Intergenic 6 7591 CEU:1.0;0.838, CHB:1.0;0.656, JPT:1.0;0.842 FUNCTIONAL_SNP rs5945610 chrX 51202545 Intergenic 6 7512 CEU:1.0;0.838, CHB:1.0;0.656, JPT:1.0;0.842 FUNCTIONAL_SNP rs5945621 chrX 51242881 Intergenic 6 32824 CEU:1.0;0.891, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1327302 chrX 51210615 Intergenic 6 558 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.599 FUNCTIONAL_SNP rs6614428 chrX 51272176 Intergenic 6 62119 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs1936038 chrX 51251421 Intron 6 41364 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs2153993 chrX 51269739 Intergenic 7 59682 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5945605 chrX 51190482 Intergenic 7 19575 CEU:1.0;0.838, CHB:1.0;0.656, JPT:1.0;0.842 FUNCTIONAL_SNP rs2105379 chrX 51305144 Intergenic 7 95087 CEU:1.0;0.845, CHB:1.0;0.737, JPT:1.0;1.0, YRI:1.0;0.565 FUNCTIONAL_SNP rs2384958 chrX 51249397 Intron 7 39340 CEU:1.0;0.893, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs5987418 chrX 51197213 Intergenic 7 12844 CEU:1.0;0.838, CHB:1.0;0.656, JPT:1.0;0.842 FUNCTIONAL_SNP rs5987421 chrX 51226490 Intergenic 7 16433 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5987438 chrX 51308981 Intergenic 7 98924 CEU:1.0;0.842, CHB:1.0;0.738, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs4907797 chrX 51282791 Intergenic 7 72734 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs1936034 chrX 51342950 Intergenic 7 132893 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0, YRI:1.0;0.672 FUNCTIONAL_SNP rs1936035 chrX 51316259 Intergenic 7 106202 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0, YRI:1.0;0.565 FUNCTIONAL_SNP rs4457126 chrX 51317899 Intergenic 7 107842 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0, YRI:1.0;0.565 FUNCTIONAL_SNP rs1541240 chrX 51288111 Intergenic 7 78054 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1541241 chrX 51287789 Intergenic 7 77732 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5945569 chrX 51193211 Intergenic 7 16846 CEU:1.0;0.838, CHB:1.0;0.656, JPT:1.0;0.842 FUNCTIONAL_SNP rs5945573 chrX 51254350 Intergenic 7 44293 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4907775 chrX 51263200 Intergenic 7 53143 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1970956 chrX 51268378 Intergenic 7 58321 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1970957 chrX 51268450 Intergenic 7 58393 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs5945617 chrX 51227221 Intergenic 7 17164 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5945618 chrX 51228551 Intergenic 7 18494 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5945619 chrX 51241672 Intergenic 7 31615 CEU:1.0;0.893, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs4907796 chrX 51261249 Intergenic 7 51192 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.536 FUNCTIONAL_SNP rs1343272 chrX 51307940 Intergenic 7 97883 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs5945644 chrX 51309461 Intergenic 7 99404 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs6614317 chrX 51309801 Intergenic 7 99744 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0 FUNCTIONAL_SNP rs5945650 chrX 51340387 Intergenic 7 130330 CEU:1.0;0.8, CHB:1.0;0.738, JPT:1.0;1.0 FUNCTIONAL_SNP rs5945651 chrX 51343494 Intergenic 7 133437 CEU:1.0;0.845, CHB:1.0;0.737, JPT:1.0;1.0, YRI:1.0;0.634 FUNCTIONAL_SNP rs1891702 chrX 51245461 Intron 7 35404 CEU:1.0;0.893, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6614426 chrX 51264424 Intergenic 7 54367 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6614429 chrX 51272577 Intergenic 7 62520 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.566 FUNCTIONAL_SNP rs4308906 chrX 51318466 Intergenic 7 108409 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0 FUNCTIONAL_SNP rs1592303 chrX 51290282 Intergenic 7 80225 CEU:1.0;0.845, CHB:1.0;0.738, JPT:1.0;1.0 LEAD_SNP rs5945572 chrX 51229683 Intergenic 6 ASSOCIATION 18264098 Prostate cancer 12.3979400087 CXorf67 - NUDT11 FUNCTIONAL_SNP rs1327302 chrX 51210615 Intergenic 6 19068 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.847 FUNCTIONAL_SNP rs5945617 chrX 51227221 Intergenic 7 2462 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs5945619 chrX 51241672 Intergenic 7 ASSOCIATION 18264097 Prostate cancer 8.69897000434 NUDT11 - TRNAE37P FUNCTIONAL_SNP rs4907792 chrX 51248783 Exon,non-coding 4 7111 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5987397 chrX 51242303 Intergenic 6 631 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5945621 chrX 51242881 Intergenic 6 1209 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1936038 chrX 51251421 Intron 6 9749 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs2153993 chrX 51269739 Intergenic 7 28067 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs5987421 chrX 51226490 Intergenic 7 15182 CEU:1.0;0.893, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.904 FUNCTIONAL_SNP rs1541240 chrX 51288111 Intergenic 7 46439 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs1541241 chrX 51287789 Intergenic 7 46117 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs5945573 chrX 51254350 Intergenic 7 12678 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs4907775 chrX 51263200 Intergenic 7 21528 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs1970956 chrX 51268378 Intergenic 7 26706 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 FUNCTIONAL_SNP rs5945618 chrX 51228551 Intergenic 7 13121 CEU:1.0;0.893, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.951;0.904 FUNCTIONAL_SNP rs1891702 chrX 51245461 Intron 7 3789 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs6614426 chrX 51264424 Intergenic 7 22752 CEU:1.0;0.946, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.952 LEAD_SNP rs7065696 chrX 53974054 Intron 6 ASSOCIATION 21057379 Bipolar disorder and schizophrenia 6.39794000867 PHF8 FUNCTIONAL_SNP rs7883019 chrX 53969347 Exon,non-coding 5b 4707 CEU:1.0;1.0, YRI:0.909;0.758 FUNCTIONAL_SNP rs7892782 chrX 53963624 Exon,non-coding 7 10430 CEU:1.0;1.0, YRI:1.0;0.781 FUNCTIONAL_SNP rs7883722 chrX 54016221 Intron 6 42167 CEU:1.0;1.0, YRI:1.0;0.781 FUNCTIONAL_SNP rs7879511 chrX 54016140 Intron 6 42086 CEU:1.0;1.0 FUNCTIONAL_SNP rs17002477 chrX 54064535 Intron 7 90481 CEU:1.0;1.0, YRI:0.909;0.758 FUNCTIONAL_SNP rs17002479 chrX 54064786 Intron 7 90732 CEU:1.0;1.0, YRI:0.909;0.758 FUNCTIONAL_SNP rs7886772 chrX 53966984 Intron 7 7070 CEU:1.0;1.0, YRI:0.909;0.758 FUNCTIONAL_SNP rs2495801 chrX 54136368 Intron 7 162314 CEU:1.0;0.909 FUNCTIONAL_SNP rs12115965 chrX 53944921 Intergenic 7 29133 CEU:1.0;1.0, YRI:0.909;0.758 LEAD_SNP rs7064929 chrX 64367019 Intergenic 7 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 6.15490195999 ZC4H2 - CCT4P2 LEAD_SNP rs5965182 chrX 65606693 Intergenic 7 ASSOCIATION 20932654 Erectile dysfunction and prostate cancer treatment 5.22184874962 HEPH - GPR165P LEAD_SNP rs6625163 chrX 66510984 Intergenic 6 ASSOCIATION 18849991 Male-pattern baldness 10.3010299957 EDA2R - AR LEAD_SNP rs5031002 chrX 66942625 Intron 5b ASSOCIATION 19060910 LDL cholesterol 6.69897000434 AR LEAD_SNP rs4844096 chrX 68805318 Intergenic 7 ASSOCIATION 20195514 Primary tooth development (number of teeth) 10.3010299957 FAM155B - EDA FUNCTIONAL_SNP rs943498 chrX 68776768 Intergenic 4 28550 CEU:1.0;0.898 FUNCTIONAL_SNP rs5936700 chrX 68796727 Intergenic 7 8591 CEU:1.0;0.898 LEAD_SNP rs5936487 chrX 68892916 Intron 6 ASSOCIATION 20195514 Primary tooth development (time to first tooth eruption) 10.2218487496 EDA FUNCTIONAL_SNP rs2520371 chrX 68924461 Intron 5a 31545 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2804329 chrX 68925319 Intron 5a 32403 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1887366 chrX 68861523 Intron 5b 31393 CEU:1.0;1.0 FUNCTIONAL_SNP rs762663 chrX 68837190 Intron 5b 55726 CEU:1.0;0.947 FUNCTIONAL_SNP rs4844097 chrX 69035085 Intron 5b 142169 CEU:0.942;0.84 FUNCTIONAL_SNP rs4526526 chrX 69035551 Intron 5b 142635 CEU:0.941;0.837 FUNCTIONAL_SNP rs2385035 chrX 68882751 Intron 6 10165 CEU:1.0;1.0, YRI:1.0;0.601 FUNCTIONAL_SNP rs1590670 chrX 68888004 Intron 6 4912 CEU:1.0;1.0 FUNCTIONAL_SNP rs2804373 chrX 68967597 Intron 6 74681 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2188451 chrX 68997070 Intron 6 104154 CEU:0.944;0.843 FUNCTIONAL_SNP rs2188453 chrX 68996921 Intron 6 104005 CEU:0.944;0.843 FUNCTIONAL_SNP rs2520366 chrX 68928478 Intron 6 35562 CEU:1.0;1.0 FUNCTIONAL_SNP rs2520369 chrX 68926322 Intron 6 33406 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2214068 chrX 68943284 Intron 6 50368 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5980856 chrX 69032614 Intron 6 139698 CEU:0.944;0.843 FUNCTIONAL_SNP rs2520380 chrX 69016036 Intron 6 123120 CEU:0.943;0.841 FUNCTIONAL_SNP rs2520387 chrX 68992954 Intron 6 100038 CEU:0.943;0.843, YRI:1.0;1.0 FUNCTIONAL_SNP rs2520397 chrX 68968677 Intron 6 75761 CEU:1.0;0.947, YRI:1.0;0.846 FUNCTIONAL_SNP rs2520401 chrX 68963852 Intron 6 70936 CEU:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs2804387 chrX 68977868 Intron 6 84952 CEU:1.0;0.947, YRI:1.0;0.699 FUNCTIONAL_SNP rs2520407 chrX 69023146 Intron 6 130230 CEU:0.944;0.843 FUNCTIONAL_SNP rs2804314 chrX 68988611 Intron 6 95695 CEU:0.944;0.843, YRI:1.0;1.0 FUNCTIONAL_SNP rs2804315 chrX 68989210 Intron 6 96294 CEU:0.944;0.843, YRI:1.0;1.0 FUNCTIONAL_SNP rs1327343 chrX 68895516 Intron 6 2600 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs1327350 chrX 68878751 Intron 6 14165 CEU:1.0;1.0 FUNCTIONAL_SNP rs1160315 chrX 68978960 Intron 6 86044 CEU:1.0;0.947, YRI:1.0;0.864 FUNCTIONAL_SNP rs1409920 chrX 68878258 Intron 7 14658 CEU:1.0;1.0 FUNCTIONAL_SNP rs2804357 chrX 69026263 Intron 7 133347 CEU:0.944;0.843 FUNCTIONAL_SNP rs2385042 chrX 68845071 Intron 7 47845 CEU:1.0;1.0 FUNCTIONAL_SNP rs2804388 chrX 68978106 Intron 7 85190 CEU:1.0;0.947, YRI:1.0;0.699 FUNCTIONAL_SNP rs2804372 chrX 68967266 Intron 7 74350 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2804375 chrX 68969824 Intron 7 76908 CEU:1.0;0.947, YRI:1.0;0.864 FUNCTIONAL_SNP rs12853659 chrX 69056972 Intron 7 164056 CEU:0.944;0.843 FUNCTIONAL_SNP rs4844188 chrX 68895975 Intron 7 3059 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2804382 chrX 68976336 Intron 7 83420 CEU:1.0;0.947 FUNCTIONAL_SNP rs5980833 chrX 68890298 Intron 7 2618 CEU:1.0;0.939 FUNCTIONAL_SNP rs2804386 chrX 68976918 Intron 7 84002 CEU:0.944;0.844 FUNCTIONAL_SNP rs2804363 chrX 69001928 Intron 7 109012 CEU:0.944;0.843 FUNCTIONAL_SNP rs2804392 chrX 68985952 Intron 7 93036 CEU:0.944;0.843, YRI:1.0;0.864 FUNCTIONAL_SNP rs2804342 chrX 68942461 Intron 7 49545 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2520367 chrX 68927107 Intron 7 34191 CEU:1.0;1.0 FUNCTIONAL_SNP rs2520368 chrX 68927025 Intron 7 34109 CEU:1.0;1.0 FUNCTIONAL_SNP rs2214066 chrX 68997294 Intron 7 104378 CEU:0.944;0.843 FUNCTIONAL_SNP rs1359798 chrX 68879916 Intron 7 13000 CEU:1.0;1.0 FUNCTIONAL_SNP rs2520375 chrX 68911918 Intron 7 19002 CEU:1.0;1.0 FUNCTIONAL_SNP rs2520377 chrX 68911449 Intron 7 18533 CEU:1.0;1.0 FUNCTIONAL_SNP rs2520389 chrX 68981352 Intron 7 88436 CEU:0.944;0.843 FUNCTIONAL_SNP rs2520390 chrX 68978067 Intron 7 85151 CEU:1.0;0.947 FUNCTIONAL_SNP rs2520391 chrX 68976805 Intron 7 83889 CEU:1.0;0.947, YRI:1.0;0.864 FUNCTIONAL_SNP rs4143050 chrX 68891327 Intron 7 1589 CEU:1.0;1.0 FUNCTIONAL_SNP rs2804366 chrX 68954139 Intron 7 61223 CEU:1.0;1.0, YRI:1.0;0.864 FUNCTIONAL_SNP rs2520408 chrX 68942436 Intron 7 49520 CEU:1.0;1.0 FUNCTIONAL_SNP rs882137 chrX 68838566 Intron 7 54350 CEU:1.0;0.947 FUNCTIONAL_SNP rs2804316 chrX 68907925 Intron 7 15009 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs4844099 chrX 69049433 Intron 7 156517 CEU:0.944;0.843 FUNCTIONAL_SNP rs2804389 chrX 68978257 Intron 7 85341 CEU:1.0;0.947 FUNCTIONAL_SNP rs2804321 chrX 68916792 Intron 7 23876 CEU:1.0;1.0 FUNCTIONAL_SNP rs5936482 chrX 68850854 Intron 7 42062 CEU:1.0;0.947 FUNCTIONAL_SNP rs5936727 chrX 68893597 Intron 7 681 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2804391 chrX 68985702 Intron 7 92786 CEU:0.944;0.843, YRI:1.0;0.864 FUNCTIONAL_SNP rs2804334 chrX 68934574 Intron 7 41658 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2031731 chrX 68872622 Intron 7 20294 CEU:1.0;1.0, YRI:1.0;0.549 FUNCTIONAL_SNP rs2804393 chrX 68986318 Intron 7 93402 CEU:0.944;0.843, YRI:1.0;0.864 FUNCTIONAL_SNP rs1359795 chrX 68889522 Intron 7 3394 CEU:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs5937496 chrX 75347434 Intergenic 4 ASSOCIATION 19734901 Amyotrophic lateral sclerosis 6.22184874962 SAR1AP4 - CXorf26 FUNCTIONAL_SNP rs4892665 chrX 75499790 Intergenic 4 152356 CEU:0.931;0.81 FUNCTIONAL_SNP rs9887746 chrX 75474591 Intergenic 5b 127157 CEU:0.928;0.861 FUNCTIONAL_SNP rs6647953 chrX 75394070 Intron 5b 46636 CEU:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs5938334 chrX 75264790 Intergenic 5b 82644 CEU:1.0;0.935, YRI:0.932;0.764 FUNCTIONAL_SNP rs2301862 chrX 75395187 Intron 5b 47753 CEU:0.934;0.872 FUNCTIONAL_SNP rs5981411 chrX 75394090 Intron 5b 46656 CEU:0.931;0.866 FUNCTIONAL_SNP rs5938387 chrX 75346753 Intergenic 5b 681 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5982036 chrX 75474644 Intergenic 5b 127210 CEU:0.931;0.81 FUNCTIONAL_SNP rs2526336 chrX 75428053 Intergenic 6 80619 CEU:0.931;0.81 FUNCTIONAL_SNP rs5938441 chrX 75466747 Intergenic 6 119313 CEU:0.928;0.802 FUNCTIONAL_SNP rs10449035 chrX 75320461 Intergenic 6 26973 CEU:1.0;1.0, YRI:1.0;0.935 FUNCTIONAL_SNP rs10449039 chrX 75318230 Intergenic 6 29204 CEU:1.0;1.0, YRI:1.0;0.935 FUNCTIONAL_SNP rs1304257 chrX 75286684 Intergenic 6 60750 CEU:1.0;1.0, YRI:0.927;0.801 FUNCTIONAL_SNP rs5937475 chrX 75264338 Intergenic 6 83096 CEU:1.0;0.923, YRI:1.0;0.914 FUNCTIONAL_SNP rs5938378 chrX 75326133 Intergenic 6 21301 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5938379 chrX 75328607 Intergenic 6 18827 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5937486 chrX 75324856 Intergenic 6 22578 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5982052 chrX 75505466 Intergenic 6 158032 CEU:0.931;0.81 FUNCTIONAL_SNP rs3866703 chrX 75472589 Intergenic 6 125155 CEU:0.931;0.81 FUNCTIONAL_SNP rs2367717 chrX 75417474 Intergenic 6 70040 CEU:0.934;0.872 FUNCTIONAL_SNP rs2189676 chrX 75405895 Intergenic 6 58461 CEU:0.934;0.872 FUNCTIONAL_SNP rs5938381 chrX 75328972 Intergenic 6 18462 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12848248 chrX 75446608 Intergenic 6 99174 CEU:0.931;0.81 FUNCTIONAL_SNP rs6423040 chrX 75412738 Intergenic 7 65304 CEU:0.934;0.872 FUNCTIONAL_SNP rs4301570 chrX 75221873 Intergenic 7 125561 CEU:1.0;0.935, YRI:0.933;0.816 FUNCTIONAL_SNP rs11093637 chrX 75449975 Intergenic 7 102541 CEU:0.931;0.81 FUNCTIONAL_SNP rs5938310 chrX 75220025 Intergenic 7 127409 CEU:1.0;0.927, YRI:0.931;0.867 FUNCTIONAL_SNP rs4892428 chrX 75461877 Intergenic 7 114443 CEU:0.931;0.81 FUNCTIONAL_SNP rs1114638 chrX 75467653 Intergenic 7 120219 CEU:0.931;0.81 FUNCTIONAL_SNP rs10449040 chrX 75318876 Intergenic 7 28558 CEU:1.0;1.0, YRI:1.0;0.935 FUNCTIONAL_SNP rs2262291 chrX 75425126 Intergenic 7 77692 CEU:0.93;0.809 FUNCTIONAL_SNP rs5981972 chrX 75198185 Intergenic 7 149249 CEU:0.931;0.81 FUNCTIONAL_SNP rs5938455 chrX 75487458 Intergenic 7 140024 CEU:0.931;0.81 FUNCTIONAL_SNP rs7891787 chrX 75347700 Intergenic 7 266 CEU:1.0;0.812, YRI:1.0;1.0 FUNCTIONAL_SNP rs12156973 chrX 75249257 Intergenic 7 98177 CEU:1.0;0.935, YRI:0.933;0.816 FUNCTIONAL_SNP rs4411063 chrX 75481813 Intergenic 7 134379 CEU:0.931;0.81 FUNCTIONAL_SNP rs5938367 chrX 75308651 Intergenic 7 38783 CEU:1.0;0.937, YRI:1.0;0.935 FUNCTIONAL_SNP rs5938370 chrX 75320113 Intergenic 7 27321 CEU:1.0;1.0, YRI:1.0;0.926 FUNCTIONAL_SNP rs5938375 chrX 75324019 Intergenic 7 23415 CEU:1.0;1.0, YRI:1.0;0.935 FUNCTIONAL_SNP rs5937481 chrX 75276324 Intergenic 7 71110 CEU:1.0;0.935, YRI:1.0;0.935 FUNCTIONAL_SNP rs5937485 chrX 75324727 Intergenic 7 22707 CEU:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2214607 chrX 75405739 Intergenic 7 58305 CEU:0.934;0.872, YRI:1.0;0.591 FUNCTIONAL_SNP rs3866704 chrX 75472854 Intergenic 7 125420 CEU:0.931;0.81 FUNCTIONAL_SNP rs7055950 chrX 75281996 Intergenic 7 65438 CEU:1.0;1.0, YRI:0.933;0.816 FUNCTIONAL_SNP rs12557270 chrX 75471537 Intergenic 7 124103 CEU:0.931;0.81 FUNCTIONAL_SNP rs5982073 chrX 75532541 Intergenic 7 185107 CEU:0.931;0.81 FUNCTIONAL_SNP rs2367715 chrX 75404503 Intergenic 7 57069 CEU:1.0;0.872, YRI:1.0;1.0 FUNCTIONAL_SNP rs5938404 chrX 75389174 Intergenic 7 41740 CEU:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs5938406 chrX 75391770 Intergenic 7 44336 CEU:1.0;0.935 FUNCTIONAL_SNP rs5938407 chrX 75391831 Intergenic 7 44397 CEU:0.934;0.872 FUNCTIONAL_SNP rs5938411 chrX 75414399 Intergenic 7 66965 CEU:0.934;0.872, YRI:1.0;0.582 FUNCTIONAL_SNP rs5938323 chrX 75233002 Intergenic 7 114432 CEU:1.0;0.935, YRI:1.0;0.935 FUNCTIONAL_SNP rs1989110 chrX 75281043 Intergenic 7 66391 CEU:1.0;1.0, YRI:1.0;0.935 FUNCTIONAL_SNP rs5938423 chrX 75450826 Intergenic 7 103392 CEU:1.0;0.812, YRI:1.0;0.639 FUNCTIONAL_SNP rs5982075 chrX 75533535 Intergenic 7 186101 CEU:0.931;0.81 FUNCTIONAL_SNP rs16992144 chrX 75385777 Intergenic 7 38343 CEU:1.0;0.935, YRI:1.0;1.0 FUNCTIONAL_SNP rs4548350 chrX 75503756 Intergenic 7 156322 CEU:0.931;0.81 LEAD_SNP rs1474563 chrX 78649193 Intergenic 7 ASSOCIATION 18391951 Height 5.52287874528 ITM2A - TBX22 FUNCTIONAL_SNP rs12392563 chrX 78631035 Intergenic 6 18158 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs1410530 chrX 82535169 Intergenic 5b ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.39794000867 RPL22P22 - POU3F4 FUNCTIONAL_SNP rs169753 chrX 82426683 Intergenic 6 108486 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883 FUNCTIONAL_SNP rs210464 chrX 82449186 Intergenic 6 85983 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.835;0.628 FUNCTIONAL_SNP rs210466 chrX 82444246 Intergenic 6 90923 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883 FUNCTIONAL_SNP rs12010729 chrX 82461795 Intergenic 6 73374 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.883;0.578 FUNCTIONAL_SNP rs17313554 chrX 82530171 Intergenic 6 4998 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs12012009 chrX 82486546 Intergenic 6 48623 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.883;0.578 FUNCTIONAL_SNP rs12007416 chrX 82477393 Intergenic 6 57776 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.88;0.547 FUNCTIONAL_SNP rs12006933 chrX 82493426 Intergenic 6 41743 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.88;0.547 FUNCTIONAL_SNP rs7064448 chrX 82529564 Intergenic 7 5605 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17266835 chrX 82458917 Intergenic 7 76252 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.883;0.578 FUNCTIONAL_SNP rs12013960 chrX 82496069 Intergenic 7 39100 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.882 FUNCTIONAL_SNP rs401037 chrX 82435086 Intergenic 7 100083 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.824;0.609 FUNCTIONAL_SNP rs210446 chrX 82421770 Intergenic 7 113399 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883 FUNCTIONAL_SNP rs210450 chrX 82417903 Intergenic 7 117266 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.835;0.628 FUNCTIONAL_SNP rs12011667 chrX 82462034 Intergenic 7 73135 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.883;0.58 FUNCTIONAL_SNP rs7063188 chrX 82527017 Intergenic 7 8152 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs210453 chrX 82416833 Intergenic 7 118336 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.872 FUNCTIONAL_SNP rs3904089 chrX 82464602 Intergenic 7 70567 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.884;0.581 FUNCTIONAL_SNP rs210461 chrX 82453657 Intergenic 7 81512 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.835;0.628 FUNCTIONAL_SNP rs210462 chrX 82453245 Intergenic 7 81924 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.881, YRI:0.827;0.646 FUNCTIONAL_SNP rs210463 chrX 82450199 Intergenic 7 84970 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.834;0.627 FUNCTIONAL_SNP rs12688929 chrX 82519977 Intergenic 7 15192 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs17266863 chrX 82504054 Intergenic 7 31115 CEU:1.0;1.0, CHB:1.0;0.787, JPT:1.0;0.857, YRI:1.0;0.895 FUNCTIONAL_SNP rs158515 chrX 82448796 Intergenic 7 86373 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.882, YRI:0.835;0.628 FUNCTIONAL_SNP rs4828228 chrX 82459788 Intergenic 7 75381 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.877;0.518 FUNCTIONAL_SNP rs2046277 chrX 82503057 Intergenic 7 32112 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883 FUNCTIONAL_SNP rs290379 chrX 82498950 Intergenic 7 36219 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883 FUNCTIONAL_SNP rs12007887 chrX 82485316 Intergenic 7 49853 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.881;0.628 FUNCTIONAL_SNP rs12689876 chrX 82534578 Intergenic 7 591 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs7879253 chrX 82470763 Intergenic 7 64406 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.884;0.581 FUNCTIONAL_SNP rs1753305 chrX 82512068 Intergenic 7 23101 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883 FUNCTIONAL_SNP rs423002 chrX 82435348 Intergenic 7 99821 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883 FUNCTIONAL_SNP rs2770139 chrX 82474629 Intergenic 7 60540 CEU:1.0;0.844, CHB:1.0;1.0, JPT:1.0;0.883 FUNCTIONAL_SNP rs12688013 chrX 82489513 Intergenic 7 45656 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:1.0;0.724 FUNCTIONAL_SNP rs1410529 chrX 82535468 Intergenic 7 299 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1410531 chrX 82461193 Intergenic 7 73976 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.884;0.581 FUNCTIONAL_SNP rs1410532 chrX 82461269 Intergenic 7 73900 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.884;0.581 FUNCTIONAL_SNP rs17313526 chrX 82479435 Intergenic 7 55734 CEU:1.0;0.821, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.941;0.717 FUNCTIONAL_SNP rs771837 chrX 82507485 Intergenic 7 27684 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.787 FUNCTIONAL_SNP rs4828229 chrX 82471561 Intergenic 7 63608 CEU:1.0;0.845, CHB:1.0;1.0, JPT:1.0;0.883, YRI:0.939;0.711 LEAD_SNP rs2710057 chrX 86192003 Intergenic 7 ASSOCIATION 19079262 Bone mineral density (hip) 6.0 BA345E19.2 - KLHL4 FUNCTIONAL_SNP rs2858697 chrX 86192361 Intergenic 7 358 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 FUNCTIONAL_SNP rs5923694 chrX 86195855 Intergenic 7 3852 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.829 LEAD_SNP rs12012519 chrX 87190349 Intergenic 7 ASSOCIATION 20041166 HIV-1 control 5.15490195999 MRPS22P1 - CAPZA1P LEAD_SNP rs5941436 chrX 89288227 Intergenic 6 ASSOCIATION 20125193 Cognitive test performance 5.30102999566 TGIF2LX - USP12PX FUNCTIONAL_SNP rs12556744 chrX 89279071 Intergenic 6 9156 CEU:1.0;1.0, CHB:1.0;0.911, JPT:1.0;1.0, YRI:1.0;0.821 FUNCTIONAL_SNP rs12556172 chrX 89287018 Intergenic 7 1209 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5941427 chrX 89274066 Intergenic 7 14161 CEU:1.0;1.0, CHB:1.0;0.919, JPT:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs5941431 chrX 89285141 Intergenic 7 3086 CEU:1.0;1.0, CHB:1.0;0.919, JPT:1.0;1.0, YRI:1.0;0.863 LEAD_SNP rs2573905 chrX 91402220 Intron 5b ASSOCIATION 19136949 Alzheimer's disease 6.69897000434 PCDH11X FUNCTIONAL_SNP rs5984894 chrX 91393737 Intron 7 8483 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs5990417 chrX 95079870 Intergenic 7 ASSOCIATION 20038947 Major depressive disorder (broad) 5.22184874962 RPS7P13 - RPS29P28 LEAD_SNP rs5943057 chrX 109939205 Intron 7 ASSOCIATION 21378988 Coronary heart disease 6.04575749056 CHRDL1 FUNCTIONAL_SNP rs5943053 chrX 109931856 Coding 7 7349 CEU:0.942;0.888, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12012172 chrX 109917734 Exon,non-coding 6 21471 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2223782 chrX 109918851 Exon,non-coding 4 20354 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2404177 chrX 109918881 Exon,non-coding 4 20324 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2206971 chrX 109909035 Intergenic 4 30170 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942673 chrX 109912906 Intergenic 4 26299 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942951 chrX 109757981 Intergenic 5b 181224 CEU:1.0;0.945, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942955 chrX 109763603 Intergenic 5b 175602 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs1573036 chrX 109820068 Intergenic 5b 119137 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942958 chrX 109784640 Intergenic 5b 154565 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985488 chrX 109776088 Intergenic 5b 163117 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943045 chrX 109921910 Intron 5b 17295 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7887749 chrX 109779387 Intergenic 5b 159818 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs955230 chrX 109806482 Intergenic 5b 132723 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942644 chrX 109780229 Intergenic 5b 158976 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942652 chrX 109830714 Intergenic 5b 108491 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985280 chrX 109779999 Intergenic 6 159206 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985281 chrX 109781800 Intergenic 6 157405 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985297 chrX 109883087 Intergenic 6 56118 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985302 chrX 109923384 Intron 6 15821 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs10047014 chrX 109929651 Intron 6 9554 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5985544 chrX 109940195 Intron 6 990 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.778 FUNCTIONAL_SNP rs7876360 chrX 109739964 Intergenic 6 199241 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs12853845 chrX 109880410 Intergenic 6 58795 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs1418333 chrX 109833420 Intergenic 6 105785 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs2016878 chrX 109933926 Intron 6 5279 CEU:0.946;0.895, CHB:1.0;1.0 FUNCTIONAL_SNP rs12007540 chrX 109784378 Intergenic 6 154827 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs7060124 chrX 109940046 Intron 6 841 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942953 chrX 109761850 Intergenic 6 177355 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942974 chrX 109827725 Intergenic 6 111480 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985489 chrX 109777306 Intergenic 6 161899 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985490 chrX 109778729 Intergenic 6 160476 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985491 chrX 109781243 Intergenic 6 157962 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943004 chrX 109867426 Intergenic 6 71779 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943023 chrX 109892754 Intergenic 6 46451 CEU:1.0;1.0 FUNCTIONAL_SNP rs5943046 chrX 109923280 Intron 6 15925 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943047 chrX 109927567 Intron 6 11638 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5943050 chrX 109929063 Intron 6 10142 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs12396834 chrX 109758608 Intergenic 6 180597 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs7882060 chrX 109865707 Intergenic 6 73498 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942645 chrX 109780426 Intergenic 6 158779 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942650 chrX 109818258 Intergenic 6 120947 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942656 chrX 109866545 Intergenic 6 72660 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942660 chrX 109879828 Intergenic 6 59377 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs2019206 chrX 109789900 Intergenic 6 149305 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942672 chrX 109912758 Intergenic 6 26447 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985535 chrX 109895249 Intergenic 6 43956 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985301 chrX 109892480 Intergenic 7 46725 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12395955 chrX 109762653 Intergenic 7 176552 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985546 chrX 109940577 Intron 7 1372 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs7057679 chrX 109787954 Intergenic 7 151251 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs6642787 chrX 109880402 Intergenic 7 58803 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7886444 chrX 109909684 Intergenic 7 29521 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12857107 chrX 109926710 Intron 7 12495 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7049750 chrX 109835230 Intergenic 7 103975 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5942957 chrX 109778405 Intergenic 7 160800 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942960 chrX 109789335 Intergenic 7 149870 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs2179764 chrX 109907482 Intergenic 7 31723 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs7890102 chrX 109775721 Intergenic 7 163484 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942971 chrX 109816218 Intergenic 7 122987 CEU:0.946;0.895, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942972 chrX 109816550 Intergenic 7 122655 CEU:1.0;0.897, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942977 chrX 109833905 Intergenic 7 105300 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942981 chrX 109840253 Intergenic 7 98952 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7063758 chrX 109835086 Intergenic 7 104119 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5942998 chrX 109858647 Intergenic 7 80558 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985496 chrX 109802133 Intergenic 7 137072 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985498 chrX 109822030 Intergenic 7 117175 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985503 chrX 109839225 Intergenic 7 99980 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs11152612 chrX 109839700 Intergenic 7 99505 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs7884019 chrX 109809489 Intergenic 7 129716 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943019 chrX 109879017 Intergenic 7 60188 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943021 chrX 109882597 Intergenic 7 56608 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943022 chrX 109889570 Intergenic 7 49635 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943027 chrX 109897121 Intergenic 7 42084 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985529 chrX 109890023 Intergenic 7 49182 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs2206973 chrX 109915180 Intergenic 7 24025 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943039 chrX 109907243 Intergenic 7 31962 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943040 chrX 109910702 Intergenic 7 28503 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943044 chrX 109920065 Intron 7 19140 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5943048 chrX 109928432 Intron 7 10773 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985545 chrX 109940296 Intron 7 1091 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5943051 chrX 109929506 Intron 7 9699 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5943052 chrX 109931799 Intron 7 7406 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5943055 chrX 109935846 Intron 7 3359 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5943056 chrX 109935983 Intron 7 3222 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;0.863 FUNCTIONAL_SNP rs12392723 chrX 109810458 Intergenic 7 128747 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942662 chrX 109882692 Intergenic 7 56513 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs7050023 chrX 109789616 Intergenic 7 149589 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs12832585 chrX 109823282 Intergenic 7 115923 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942640 chrX 109740592 Intergenic 7 198613 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942643 chrX 109774409 Intergenic 7 164796 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942648 chrX 109788727 Intergenic 7 150478 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942651 chrX 109827622 Intergenic 7 111583 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942657 chrX 109868315 Intergenic 7 70890 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942661 chrX 109879876 Intergenic 7 59329 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942663 chrX 109889662 Intergenic 7 49543 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942664 chrX 109890719 Intergenic 7 48486 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942665 chrX 109890903 Intergenic 7 48302 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs6567883 chrX 109869935 Intergenic 7 69270 CEU:0.946;0.895, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942674 chrX 109923910 Intron 7 15295 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942675 chrX 109923990 Intron 7 15215 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5942676 chrX 109925412 Intron 7 13793 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5942677 chrX 109930730 Intron 7 8475 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5942678 chrX 109931042 Intron 7 8163 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942680 chrX 109938188 Intron 7 1017 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5942681 chrX 109938369 Intron 7 836 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985519 chrX 109876267 Intergenic 7 62938 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985523 chrX 109881780 Intergenic 7 57425 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs6567872 chrX 109775671 Intergenic 7 163534 CEU:1.0;0.946, CHB:1.0;1.0 FUNCTIONAL_SNP rs881090 chrX 109820220 Intergenic 7 118985 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs2226123 chrX 109829741 Intergenic 7 109464 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs12834261 chrX 109881597 Intergenic 7 57608 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs12849634 chrX 109774654 Intergenic 7 164551 CEU:1.0;0.947, CHB:1.0;1.0 FUNCTIONAL_SNP rs5985531 chrX 109890221 Intergenic 7 48984 CEU:1.0;1.0, CHB:1.0;1.0 FUNCTIONAL_SNP rs10126502 chrX 109921540 Intron 7 17665 CEU:1.0;1.0, CHB:1.0;1.0, YRI:1.0;1.0 LEAD_SNP rs7050529 chrX 111155233 Intron 7 ASSOCIATION 19247474 Smoking behavior 5.22184874962 TRPC5 LEAD_SNP rs5982533 chrX 111646464 Intergenic 6 ASSOCIATION 19260141 Biochemical measures 5.15490195999 ZCCHC16 FUNCTIONAL_SNP rs6643033 chrX 111657436 Intergenic 7 10972 CEU:1.0;0.931, CHB:1.0;0.823, JPT:1.0;0.817, YRI:1.0;0.821 FUNCTIONAL_SNP rs12009340 chrX 111650244 Intergenic 7 3780 CEU:1.0;0.93, CHB:1.0;0.871, JPT:1.0;0.807, YRI:1.0;0.806 LEAD_SNP rs1403543 chrX 115302192 Intron 7 ASSOCIATION 21602797 Cystic fibrosis severity 5.69897000434 AGTR2 LEAD_SNP rs2430212 chrX 117088056 Intron 6 ASSOCIATION 19084217 Serum markers of iron status 5.69897000434 KLHL13 LEAD_SNP rs5910578 chrX 118567702 Intron 6 ASSOCIATION 21623375 Paget's disease 7.0 SLC25A43 FUNCTIONAL_SNP rs217995 chrX 118559300 Intron 5b 8402 CEU:1.0;0.945, CHB:1.0;0.801, JPT:1.0;0.542 FUNCTIONAL_SNP rs217996 chrX 118559311 Intron 5b 8391 CEU:1.0;0.945, CHB:1.0;0.747 FUNCTIONAL_SNP rs5909625 chrX 118576971 Intron 5b 9269 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs217979 chrX 118535591 Intron 5b 32111 CEU:0.942;0.888, JPT:0.806;0.515 FUNCTIONAL_SNP rs403558 chrX 118579284 Intron 7 11582 CEU:0.94;0.834, CHB:1.0;0.698, JPT:1.0;0.508 LEAD_SNP rs17324272 chrX 132137156 Intergenic 6 ASSOCIATION 20041166 HIV-1 control 6.69897000434 HS6ST2 - USP26 LEAD_SNP rs1190739 chrX 136055295 Intron 6 ASSOCIATION 21347282 Coronary heart disease 5.30102999566 SNORD61 - SRRM1P3 FUNCTIONAL_SNP rs2485702 chrX 136081364 Intergenic 5b 26069 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.872, YRI:1.0;0.947 FUNCTIONAL_SNP rs4020654 chrX 136006099 Intron 6 49196 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.872, YRI:1.0;1.0 FUNCTIONAL_SNP rs1190741 chrX 136079235 Intergenic 6 23940 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;0.872, YRI:1.0;1.0 LEAD_SNP rs5955415 chrX 139314056 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.69897000434 CXorf66 - RPS17P17 FUNCTIONAL_SNP rs3850611 chrX 139291728 Intergenic 7 22328 CEU:1.0;1.0 FUNCTIONAL_SNP rs7060330 chrX 139311270 Intergenic 7 2786 CEU:1.0;1.0, YRI:1.0;0.939 LEAD_SNP rs6627057 chrX 144141319 Intergenic 7 ASSOCIATION 20889312 Bipolar disorder and schizophrenia 6.0 RRM2P4 - CYCSP44 FUNCTIONAL_SNP rs6525917 chrX 144137612 Intergenic 6 3707 CEU:1.0;1.0, CHB:1.0;0.929, JPT:1.0;1.0, YRI:1.0;0.833 FUNCTIONAL_SNP rs6627055 chrX 144136727 Intergenic 7 4592 CEU:1.0;1.0, CHB:1.0;0.925, JPT:1.0;1.0, YRI:1.0;0.658 FUNCTIONAL_SNP rs4827763 chrX 144129908 Intergenic 7 11411 CEU:1.0;1.0, CHB:1.0;0.927, JPT:1.0;1.0 FUNCTIONAL_SNP rs6525911 chrX 144127387 Intergenic 7 13932 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0 LEAD_SNP rs5904726 chrX 146322623 Intergenic 6 ASSOCIATION 21347282 Coronary heart disease 5.04575749056 CXorf51 - ASFMR1 LEAD_SNP rs5936441 chrX 147324256 Intergenic 7 ASSOCIATION 21177773 Response to acetaminophen (hepatotoxicity) 5.30102999566 FTHL8 - AFF2 FUNCTIONAL_SNP rs2071033 chrX 147279589 Intergenic 5b 44667 CEU:1.0;0.948, CHB:1.0;0.86, JPT:1.0;1.0 FUNCTIONAL_SNP rs7062713 chrX 147311811 Intergenic 6 12445 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5936242 chrX 147365036 Intergenic 6 40780 CEU:0.945;0.847, CHB:0.847;0.553, JPT:0.902;0.682 FUNCTIONAL_SNP rs928934 chrX 147272319 Intergenic 6 51937 CEU:1.0;0.948 FUNCTIONAL_SNP rs1419963 chrX 147295611 Intergenic 6 28645 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5936357 chrX 147284372 Intergenic 6 39884 CEU:1.0;0.948, CHB:1.0;0.86, JPT:1.0;1.0 FUNCTIONAL_SNP rs5936377 chrX 147290066 Intergenic 6 34190 CEU:1.0;0.948, CHB:1.0;0.86, JPT:1.0;1.0 FUNCTIONAL_SNP rs2213174 chrX 147284836 Intergenic 6 39420 CEU:1.0;0.948, CHB:1.0;0.86, JPT:1.0;1.0 FUNCTIONAL_SNP rs877564 chrX 147282386 Intergenic 6 41870 CEU:1.0;0.948, CHB:1.0;0.86, JPT:1.0;1.0 FUNCTIONAL_SNP rs4090449 chrX 147299796 Intergenic 7 24460 CEU:1.0;0.948, CHB:1.0;0.86, JPT:1.0;1.0 FUNCTIONAL_SNP rs5936231 chrX 147324753 Intergenic 7 497 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs6540406 chrX 147332680 Intergenic 7 8424 CEU:0.945;0.847, JPT:1.0;0.772 FUNCTIONAL_SNP rs12388487 chrX 147320335 Intergenic 7 3921 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs1833145 chrX 147361210 Intergenic 7 36954 CEU:1.0;0.897, CHB:0.846;0.552, JPT:1.0;0.772 FUNCTIONAL_SNP rs5936365 chrX 147285080 Intergenic 7 39176 CEU:0.947;0.896, CHB:1.0;0.86, JPT:1.0;1.0 FUNCTIONAL_SNP rs5936414 chrX 147310770 Intergenic 7 13486 CEU:1.0;0.948, CHB:1.0;1.0, JPT:1.0;1.0 FUNCTIONAL_SNP rs5936450 chrX 147327276 Intergenic 7 3020 CEU:0.945;0.893, JPT:1.0;0.772 FUNCTIONAL_SNP rs5936451 chrX 147327529 Intergenic 7 3273 CEU:0.945;0.893, JPT:1.0;0.772 FUNCTIONAL_SNP rs5936454 chrX 147329893 Intergenic 7 5637 CEU:0.945;0.846, JPT:1.0;0.772 FUNCTIONAL_SNP rs5936459 chrX 147268988 Intergenic 7 55268 CEU:1.0;0.948, CHB:1.0;0.86, JPT:1.0;1.0 FUNCTIONAL_SNP rs5936468 chrX 147347737 Intergenic 7 23481 CEU:0.945;0.847, JPT:1.0;0.772 FUNCTIONAL_SNP rs5936472 chrX 147353433 Intergenic 7 29177 CEU:0.945;0.847, JPT:0.902;0.682 FUNCTIONAL_SNP rs2878340 chrX 147328378 Intergenic 7 4122 CEU:0.945;0.847, JPT:1.0;0.772 FUNCTIONAL_SNP rs5980606 chrX 147334618 Intergenic 7 10362 CEU:0.945;0.847, CHB:0.847;0.553, JPT:1.0;0.772 FUNCTIONAL_SNP rs5980616 chrX 147342128 Intergenic 7 17872 CEU:0.945;0.847, CHB:0.847;0.553, JPT:1.0;0.772 LEAD_SNP rs2159767 chrX 147381021 Intergenic 7 ASSOCIATION 18347602 Schizophrenia 5.15490195999 FTHL8 - AFF2 FUNCTIONAL_SNP rs2536564 chrX 147373010 Intergenic 7 8011 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.915 LEAD_SNP rs530501 chrX 148567451 Intron 7 ASSOCIATION 20125193 Cognitive test performance 5.39794000867 IDS LEAD_SNP rs5945326 chrX 152899922 Intergenic 5b ASSOCIATION 20581827 Type 2 diabetes 9.52287874528 KRT18P48 - DUSP9 FUNCTIONAL_SNP rs3020789 chrX 152892987 Intergenic 5b 6935 CEU:1.0;0.925, CHB:1.0;1.0, JPT:1.0;1.0, YRI:0.91;0.507 LEAD_SNP rs11156606 chrX 153006495 Intron 5b ASSOCIATION 20889312 Bipolar disorder and schizophrenia 5.52287874528 ABCD1 FUNCTIONAL_SNP rs4148030 chrX 152990663 Exon,non-coding 2b 15832 CEU:1.0;1.0 FUNCTIONAL_SNP rs6643764 chrX 152956663 Intron 2b 49832 CEU:1.0;1.0, CHB:1.0;0.873, YRI:0.863;0.557 FUNCTIONAL_SNP rs2071028 chrX 152959078 Intron 4 47417 CEU:1.0;0.862, CHB:1.0;1.0 FUNCTIONAL_SNP rs6643777 chrX 152985499 Intron 5b 20996 CEU:1.0;1.0 FUNCTIONAL_SNP rs6643780 chrX 152995219 Intron 5b 11276 CEU:1.0;1.0 FUNCTIONAL_SNP rs6571291 chrX 152997097 Intron 5b 9398 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.941 FUNCTIONAL_SNP rs6571292 chrX 152997277 Intron 5b 9218 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.941 FUNCTIONAL_SNP rs6643643 chrX 153006659 Intron 5b 164 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;1.0 FUNCTIONAL_SNP rs5987140 chrX 153000255 Intron 5b 6240 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.941 FUNCTIONAL_SNP rs7063261 chrX 152997448 Intron 5b 9047 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.941 FUNCTIONAL_SNP rs6643775 chrX 152982350 Intron 6 24145 CEU:1.0;1.0 FUNCTIONAL_SNP rs2266870 chrX 152980164 Intron 7 26331 CEU:1.0;1.0 LEAD_SNP rs766420 chrX 153554404 Intron 7 ASSOCIATION 19419973 Bilirubin levels 8.04575749056 TKTL1 LEAD_SNP rs2664170 chrX 153945602 Intron 7 ASSOCIATION 19430480 Type 1 diabetes 8.09691001301 GAB3 FUNCTIONAL_SNP rs5987015 chrX 153947981 Intron 2b 2379 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs5987016 chrX 153948160 Intron 7 2558 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907 FUNCTIONAL_SNP rs2728526 chrX 153949217 Intron 7 3615 CEU:1.0;1.0, CHB:1.0;1.0, JPT:1.0;1.0, YRI:1.0;0.907