
Output from mraic.pl version 1.4.4 by Johan Nylander
-------------------------------------------------------------
21:49 04/04/2011

Input data from file "591-tomodel-phylip/chr8_2614.phylip" (7 taxa, 852 characters)

Minimum AIC  model: HKYG
Minimum AICc model: HKYG
Minimum BIC  model: HKYG


(Output sorted by AIC. w: Akaike weight, cw: cumulative w.)

Model	df	lnL		AIC		wAIC	cwAIC
HKYG	16	-2304.1899	4640.3798	0.3858	0.3858
HKYI	16	-2304.2694	4640.5389	0.3563	0.7421
HKYIG	17	-2304.2137	4642.4273	0.1386	0.8807
GTRG	20	-2302.1208	4644.2415	0.0559	0.9366
GTRI	20	-2302.4305	4644.8610	0.0410	0.9777
GTRIG	21	-2302.0387	4646.0774	0.0223	1.0000
HKY	15	-2337.6951	4705.3902	0.0000	1.0000
GTR	19	-2336.2117	4710.4233	0.0000	1.0000
K2PG	13	-2344.5777	4715.1555	0.0000	1.0000
K2PI	13	-2344.6167	4715.2334	0.0000	1.0000
K2PIG	14	-2344.5865	4717.1729	0.0000	1.0000
F81I	15	-2344.3766	4718.7531	0.0000	1.0000
F81G	15	-2344.7327	4719.4654	0.0000	1.0000
SYMG	17	-2343.5949	4721.1897	0.0000	1.0000
SYMI	17	-2343.6636	4721.3272	0.0000	1.0000
F81IG	16	-2344.7328	4721.4655	0.0000	1.0000
SYMIG	18	-2343.6616	4723.3233	0.0000	1.0000
F81	14	-2375.7811	4779.5621	0.0000	1.0000
K2P	12	-2378.4205	4780.8410	0.0000	1.0000
JC69I	12	-2379.9270	4783.8541	0.0000	1.0000
JC69G	12	-2380.2211	4784.4423	0.0000	1.0000
JC69IG	13	-2380.2212	4786.4423	0.0000	1.0000
SYM	16	-2378.0122	4788.0243	0.0000	1.0000
JC69	11	-2411.7968	4845.5936	0.0000	1.0000



(Output sorted by BIC. w: Akaike weight, cw: cumulative w.)

Model	df	lnL		BIC		wBIC	cwBIC
HKYG	16	-2304.1899	4716.3412	0.5110	0.5110
HKYI	16	-2304.2694	4716.5002	0.4719	0.9829
HKYIG	17	-2304.2137	4723.1363	0.0171	1.0000
GTRG	20	-2302.1208	4739.1933	0.0000	1.0000
GTRI	20	-2302.4305	4739.8127	0.0000	1.0000
GTRIG	21	-2302.0387	4745.7768	0.0000	1.0000
HKY	15	-2337.6951	4776.6040	0.0000	1.0000
K2PG	13	-2344.5777	4776.8741	0.0000	1.0000
K2PI	13	-2344.6167	4776.9520	0.0000	1.0000
K2PIG	14	-2344.5865	4783.6392	0.0000	1.0000
F81I	15	-2344.3766	4789.9669	0.0000	1.0000
F81G	15	-2344.7327	4790.6792	0.0000	1.0000
F81IG	16	-2344.7328	4797.4269	0.0000	1.0000
GTR	19	-2336.2117	4800.6274	0.0000	1.0000
SYMG	17	-2343.5949	4801.8987	0.0000	1.0000
SYMI	17	-2343.6636	4802.0362	0.0000	1.0000
SYMIG	18	-2343.6616	4808.7798	0.0000	1.0000
K2P	12	-2378.4205	4837.8121	0.0000	1.0000
JC69I	12	-2379.9270	4840.8251	0.0000	1.0000
JC69G	12	-2380.2211	4841.4133	0.0000	1.0000
F81	14	-2375.7811	4846.0283	0.0000	1.0000
JC69IG	13	-2380.2212	4848.1610	0.0000	1.0000
SYM	16	-2378.0122	4863.9857	0.0000	1.0000
JC69	11	-2411.7968	4897.8171	0.0000	1.0000



To specify default values for best AIC, AICc, or BIC models in MrBayes:

[Mrbayes block for the best AIC model (HKYG)]

BEGIN MRBAYES;
 Charset 591-tomodel-phylip/chr8_2614.phylip = 1 - 852;
 Partition Dummy = 1:591-tomodel-phylip/chr8_2614.phylip;
 Set partition = Dummy;
 Lset applyto=(1) nst=2 rates=gamma;
 Prset applyto=(1) statefreqpr=Dirichlet(1.0,1.0,1.0,1.0) tratiopr=Beta(1.0,1.0) shapepr=Uniform(0.1,50.0);
END;


[Mrbayes block for the best AICc model (HKYG)]

BEGIN MRBAYES;
 Charset 591-tomodel-phylip/chr8_2614.phylip = 1 - 852;
 Partition Dummy = 1:591-tomodel-phylip/chr8_2614.phylip;
 Set partition = Dummy;
 Lset applyto=(1) nst=2 rates=gamma;
 Prset applyto=(1) statefreqpr=Dirichlet(1.0,1.0,1.0,1.0) tratiopr=Beta(1.0,1.0) shapepr=Uniform(0.1,50.0);
END;


[Mrbayes block for the best BIC model (HKYG)]

BEGIN MRBAYES;
 Charset 591-tomodel-phylip/chr8_2614.phylip = 1 - 852;
 Partition Dummy = 1:591-tomodel-phylip/chr8_2614.phylip;
 Set partition = Dummy;
 Lset applyto=(1) nst=2 rates=gamma;
 Prset applyto=(1) statefreqpr=Dirichlet(1.0,1.0,1.0,1.0) tratiopr=Beta(1.0,1.0) shapepr=Uniform(0.1,50.0);
END;


-------------------------------------------------------------
End of Output

