
Output from mraic.pl version 1.4.4 by Johan Nylander
-------------------------------------------------------------
21:48 04/04/2011

Input data from file "591-tomodel-phylip/chr6_9640.phylip" (7 taxa, 1007 characters)

Minimum AIC  model: GTRG
Minimum AICc model: GTRG
Minimum BIC  model: GTRG


(Output sorted by AIC. w: Akaike weight, cw: cumulative w.)

Model	df	lnL		AIC		wAIC	cwAIC
GTRG	20	-3661.5839	7363.1677	0.6319	0.6319
GTRIG	21	-3661.4582	7364.9164	0.2636	0.8955
GTRI	20	-3663.3838	7366.7677	0.1045	1.0000
SYMG	17	-3679.1051	7392.2101	0.0000	1.0000
SYMIG	18	-3678.9538	7393.9075	0.0000	1.0000
SYMI	17	-3680.0671	7394.1343	0.0000	1.0000
HKYG	16	-3687.8742	7407.7484	0.0000	1.0000
HKYI	16	-3688.6497	7409.2994	0.0000	1.0000
HKYIG	17	-3687.6857	7409.3715	0.0000	1.0000
K2PG	13	-3696.1803	7418.3606	0.0000	1.0000
K2PI	13	-3696.9472	7419.8945	0.0000	1.0000
K2PIG	14	-3696.0228	7420.0457	0.0000	1.0000
GTR	19	-3708.8033	7455.6066	0.0000	1.0000
SYM	16	-3724.1539	7480.3079	0.0000	1.0000
HKY	15	-3733.6321	7497.2641	0.0000	1.0000
K2P	12	-3741.9235	7507.8471	0.0000	1.0000
F81G	15	-3780.1480	7590.2961	0.0000	1.0000
F81I	15	-3780.6006	7591.2012	0.0000	1.0000
F81IG	16	-3779.8551	7591.7101	0.0000	1.0000
JC69G	12	-3785.5991	7595.1982	0.0000	1.0000
JC69I	12	-3786.0044	7596.0088	0.0000	1.0000
JC69IG	13	-3785.2997	7596.5994	0.0000	1.0000
F81	14	-3819.7043	7667.4086	0.0000	1.0000
JC69	11	-3825.2384	7672.4767	0.0000	1.0000



(Output sorted by BIC. w: Akaike weight, cw: cumulative w.)

Model	df	lnL		BIC		wBIC	cwBIC
GTRG	20	-3661.5839	7461.4624	0.8318	0.8318
GTRI	20	-3663.3838	7465.0623	0.1375	0.9693
GTRIG	21	-3661.4582	7468.1258	0.0297	0.9990
SYMG	17	-3679.1051	7475.7605	0.0007	0.9997
SYMI	17	-3680.0671	7477.6847	0.0002	0.9999
K2PG	13	-3696.1803	7482.2521	0.0000	1.0000
SYMIG	18	-3678.9538	7482.3727	0.0000	1.0000
K2PI	13	-3696.9472	7483.7860	0.0000	1.0000
HKYG	16	-3687.8742	7486.3841	0.0000	1.0000
HKYI	16	-3688.6497	7487.9351	0.0000	1.0000
K2PIG	14	-3696.0228	7488.8519	0.0000	1.0000
HKYIG	17	-3687.6857	7492.9219	0.0000	1.0000
GTR	19	-3708.8033	7548.9865	0.0000	1.0000
SYM	16	-3724.1539	7558.9436	0.0000	1.0000
K2P	12	-3741.9235	7566.8239	0.0000	1.0000
HKY	15	-3733.6321	7570.9851	0.0000	1.0000
JC69G	12	-3785.5991	7654.1750	0.0000	1.0000
JC69I	12	-3786.0044	7654.9856	0.0000	1.0000
JC69IG	13	-3785.2997	7660.4909	0.0000	1.0000
F81G	15	-3780.1480	7664.0171	0.0000	1.0000
F81I	15	-3780.6006	7664.9221	0.0000	1.0000
F81IG	16	-3779.8551	7670.3458	0.0000	1.0000
JC69	11	-3825.2384	7726.5388	0.0000	1.0000
F81	14	-3819.7043	7736.2148	0.0000	1.0000



To specify default values for best AIC, AICc, or BIC models in MrBayes:

[Mrbayes block for the best AIC model (GTRG)]

BEGIN MRBAYES;
 Charset 591-tomodel-phylip/chr6_9640.phylip = 1 - 1007;
 Partition Dummy = 1:591-tomodel-phylip/chr6_9640.phylip;
 Set partition = Dummy;
 Lset applyto=(1) nst=6 rates=gamma;
 Prset applyto=(1) revmatpr=Dirichlet(1.0,1.0,1.0,1.0,1.0,1.0) statefreqpr=Dirichlet(1.0,1.0,1.0,1.0) shapepr=Uniform(0.1,50.0);
END;


[Mrbayes block for the best AICc model (GTRG)]

BEGIN MRBAYES;
 Charset 591-tomodel-phylip/chr6_9640.phylip = 1 - 1007;
 Partition Dummy = 1:591-tomodel-phylip/chr6_9640.phylip;
 Set partition = Dummy;
 Lset applyto=(1) nst=6 rates=gamma;
 Prset applyto=(1) revmatpr=Dirichlet(1.0,1.0,1.0,1.0,1.0,1.0) statefreqpr=Dirichlet(1.0,1.0,1.0,1.0) shapepr=Uniform(0.1,50.0);
END;


[Mrbayes block for the best BIC model (GTRG)]

BEGIN MRBAYES;
 Charset 591-tomodel-phylip/chr6_9640.phylip = 1 - 1007;
 Partition Dummy = 1:591-tomodel-phylip/chr6_9640.phylip;
 Set partition = Dummy;
 Lset applyto=(1) nst=6 rates=gamma;
 Prset applyto=(1) revmatpr=Dirichlet(1.0,1.0,1.0,1.0,1.0,1.0) statefreqpr=Dirichlet(1.0,1.0,1.0,1.0) shapepr=Uniform(0.1,50.0);
END;


-------------------------------------------------------------
End of Output

