
Output from mraic.pl version 1.4.4 by Johan Nylander
-------------------------------------------------------------
21:25 04/04/2011

Input data from file "591-tomodel-phylip/chr1_15480.phylip" (7 taxa, 840 characters)

Minimum AIC  model: HKYI
Minimum AICc model: HKYI
Minimum BIC  model: HKYI


(Output sorted by AIC. w: Akaike weight, cw: cumulative w.)

Model	df	lnL		AIC		wAIC	cwAIC
HKYI	16	-3191.6701	6415.3402	0.4772	0.4772
HKYG	16	-3192.2361	6416.4722	0.2710	0.7482
HKYIG	17	-3191.6018	6417.2036	0.1880	0.9362
GTRI	20	-3190.4768	6420.9537	0.0288	0.9650
GTRG	20	-3190.7407	6421.4814	0.0221	0.9871
GTRIG	21	-3190.2836	6422.5673	0.0129	1.0000
HKY	15	-3213.6707	6457.3413	0.0000	1.0000
GTR	19	-3211.7160	6461.4320	0.0000	1.0000
K2PI	13	-3245.3694	6516.7387	0.0000	1.0000
SYMI	17	-3241.7943	6517.5885	0.0000	1.0000
SYMG	17	-3241.9813	6517.9627	0.0000	1.0000
K2PG	13	-3246.1346	6518.2692	0.0000	1.0000
K2PIG	14	-3245.3712	6518.7424	0.0000	1.0000
SYMIG	18	-3241.6792	6519.3584	0.0000	1.0000
SYM	16	-3261.4761	6554.9521	0.0000	1.0000
K2P	12	-3265.8982	6555.7964	0.0000	1.0000
F81I	15	-3290.7960	6611.5921	0.0000	1.0000
F81IG	16	-3290.8235	6613.6470	0.0000	1.0000
F81G	15	-3292.6064	6615.2128	0.0000	1.0000
F81	14	-3308.8841	6645.7682	0.0000	1.0000
JC69I	12	-3331.0694	6686.1389	0.0000	1.0000
JC69IG	13	-3331.0980	6688.1961	0.0000	1.0000
JC69G	12	-3332.8145	6689.6291	0.0000	1.0000
JC69	11	-3348.6953	6719.3906	0.0000	1.0000



(Output sorted by BIC. w: Akaike weight, cw: cumulative w.)

Model	df	lnL		BIC		wBIC	cwBIC
HKYI	16	-3191.6701	6491.0746	0.6232	0.6232
HKYG	16	-3192.2361	6492.2066	0.3538	0.9770
HKYIG	17	-3191.6018	6497.6714	0.0230	1.0000
GTRI	20	-3190.4768	6515.6217	0.0000	1.0000
GTRG	20	-3190.7407	6516.1494	0.0000	1.0000
GTRIG	21	-3190.2836	6521.9687	0.0000	1.0000
HKY	15	-3213.6707	6528.3424	0.0000	1.0000
GTR	19	-3211.7160	6551.3666	0.0000	1.0000
K2PI	13	-3245.3694	6578.2730	0.0000	1.0000
K2PG	13	-3246.1346	6579.8034	0.0000	1.0000
K2PIG	14	-3245.3712	6585.0100	0.0000	1.0000
SYMI	17	-3241.7943	6598.0564	0.0000	1.0000
SYMG	17	-3241.9813	6598.4305	0.0000	1.0000
SYMIG	18	-3241.6792	6604.5596	0.0000	1.0000
K2P	12	-3265.8982	6612.5972	0.0000	1.0000
SYM	16	-3261.4761	6630.6866	0.0000	1.0000
F81I	15	-3290.7960	6682.5931	0.0000	1.0000
F81G	15	-3292.6064	6686.2138	0.0000	1.0000
F81IG	16	-3290.8235	6689.3815	0.0000	1.0000
F81	14	-3308.8841	6712.0358	0.0000	1.0000
JC69I	12	-3331.0694	6742.9397	0.0000	1.0000
JC69G	12	-3332.8145	6746.4299	0.0000	1.0000
JC69IG	13	-3331.0980	6749.7303	0.0000	1.0000
JC69	11	-3348.6953	6771.4580	0.0000	1.0000



To specify default values for best AIC, AICc, or BIC models in MrBayes:

[Mrbayes block for the best AIC model (HKYI)]

BEGIN MRBAYES;
 Charset 591-tomodel-phylip/chr1_15480.phylip = 1 - 840;
 Partition Dummy = 1:591-tomodel-phylip/chr1_15480.phylip;
 Set partition = Dummy;
 Lset applyto=(1) nst=2 rates=propinv;
 Prset applyto=(1) statefreqpr=Dirichlet(1.0,1.0,1.0,1.0) tratiopr=Beta(1.0,1.0) pinvarpr=Uniform(0.0,1.0);
END;


[Mrbayes block for the best AICc model (HKYI)]

BEGIN MRBAYES;
 Charset 591-tomodel-phylip/chr1_15480.phylip = 1 - 840;
 Partition Dummy = 1:591-tomodel-phylip/chr1_15480.phylip;
 Set partition = Dummy;
 Lset applyto=(1) nst=2 rates=propinv;
 Prset applyto=(1) statefreqpr=Dirichlet(1.0,1.0,1.0,1.0) tratiopr=Beta(1.0,1.0) pinvarpr=Uniform(0.0,1.0);
END;


[Mrbayes block for the best BIC model (HKYI)]

BEGIN MRBAYES;
 Charset 591-tomodel-phylip/chr1_15480.phylip = 1 - 840;
 Partition Dummy = 1:591-tomodel-phylip/chr1_15480.phylip;
 Set partition = Dummy;
 Lset applyto=(1) nst=2 rates=propinv;
 Prset applyto=(1) statefreqpr=Dirichlet(1.0,1.0,1.0,1.0) tratiopr=Beta(1.0,1.0) pinvarpr=Uniform(0.0,1.0);
END;


-------------------------------------------------------------
End of Output

