Command line Training Set First Motif Summary of Motifs Termination Explanation


Search sequence databases for the best combined matches with these motifs using MAST.
Search sequence databases for all matches with these motifs using FIMO.
Find Genome Ontology terms associated with upstream sequences matching these motifs using GOMO.
Submit these motifs to BLOCKS multiple alignment processor.


MEME - Motif discovery tool

MEME version 4.3.0 (Release date: Sat Sep 26 01:51:56 PDT 2009)

For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.sdsc.edu.

This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.sdsc.edu.


REFERENCE

If you use this program in your research, please cite:

Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994.



TRAINING SET

DATAFILE= ../phastv6_official_filt2_flank5nt.fa
ALPHABET= ACGT
Sequence name Weight Length Sequence name Weight Length
ce6_ct_phastv6officialfilt2_chrI.1 1.0000 35 ce6_ct_phastv6officialfilt2_chrI.18 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.27 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.28 1.0000 61
ce6_ct_phastv6officialfilt2_chrI.36 1.0000 23 ce6_ct_phastv6officialfilt2_chrI.64 1.0000 36
ce6_ct_phastv6officialfilt2_chrI.136 1.0000 40 ce6_ct_phastv6officialfilt2_chrI.177 1.0000 39
ce6_ct_phastv6officialfilt2_chrI.183 1.0000 27 ce6_ct_phastv6officialfilt2_chrI.184 1.0000 38
ce6_ct_phastv6officialfilt2_chrI.196 1.0000 60 ce6_ct_phastv6officialfilt2_chrI.197 1.0000 34
ce6_ct_phastv6officialfilt2_chrI.284 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.289 1.0000 21
ce6_ct_phastv6officialfilt2_chrI.341 1.0000 41 ce6_ct_phastv6officialfilt2_chrI.342 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.345 1.0000 34 ce6_ct_phastv6officialfilt2_chrI.355 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.408 1.0000 52 ce6_ct_phastv6officialfilt2_chrI.472 1.0000 28
ce6_ct_phastv6officialfilt2_chrI.587 1.0000 34 ce6_ct_phastv6officialfilt2_chrI.713 1.0000 40
ce6_ct_phastv6officialfilt2_chrI.777 1.0000 38 ce6_ct_phastv6officialfilt2_chrI.778 1.0000 55
ce6_ct_phastv6officialfilt2_chrI.781 1.0000 30 ce6_ct_phastv6officialfilt2_chrI.836 1.0000 28
ce6_ct_phastv6officialfilt2_chrI.837 1.0000 25 ce6_ct_phastv6officialfilt2_chrI.842 1.0000 36
ce6_ct_phastv6officialfilt2_chrI.874 1.0000 36 ce6_ct_phastv6officialfilt2_chrI.892 1.0000 21
ce6_ct_phastv6officialfilt2_chrI.927 1.0000 47 ce6_ct_phastv6officialfilt2_chrI.941 1.0000 34
ce6_ct_phastv6officialfilt2_chrI.977 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.978 1.0000 25
ce6_ct_phastv6officialfilt2_chrI.1088 1.0000 22 ce6_ct_phastv6officialfilt2_chrI.1089 1.0000 38
ce6_ct_phastv6officialfilt2_chrI.1100 1.0000 22 ce6_ct_phastv6officialfilt2_chrI.1110 1.0000 24
ce6_ct_phastv6officialfilt2_chrI.1124 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.1125 1.0000 34
ce6_ct_phastv6officialfilt2_chrI.1158 1.0000 39 ce6_ct_phastv6officialfilt2_chrI.1171 1.0000 32
ce6_ct_phastv6officialfilt2_chrI.1172 1.0000 34 ce6_ct_phastv6officialfilt2_chrI.1188 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.1205 1.0000 45 ce6_ct_phastv6officialfilt2_chrI.1206 1.0000 20
ce6_ct_phastv6officialfilt2_chrI.1242 1.0000 53 ce6_ct_phastv6officialfilt2_chrI.1296 1.0000 56
ce6_ct_phastv6officialfilt2_chrI.1326 1.0000 25 ce6_ct_phastv6officialfilt2_chrI.1328 1.0000 25
ce6_ct_phastv6officialfilt2_chrI.1337 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.1462 1.0000 34
ce6_ct_phastv6officialfilt2_chrI.1527 1.0000 74 ce6_ct_phastv6officialfilt2_chrI.1529 1.0000 40
ce6_ct_phastv6officialfilt2_chrI.1534 1.0000 37 ce6_ct_phastv6officialfilt2_chrI.1580 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.1588 1.0000 25 ce6_ct_phastv6officialfilt2_chrI.1600 1.0000 38
ce6_ct_phastv6officialfilt2_chrI.1601 1.0000 22 ce6_ct_phastv6officialfilt2_chrI.1632 1.0000 29
ce6_ct_phastv6officialfilt2_chrI.1671 1.0000 43 ce6_ct_phastv6officialfilt2_chrI.1694 1.0000 20
ce6_ct_phastv6officialfilt2_chrI.1700 1.0000 96 ce6_ct_phastv6officialfilt2_chrI.1757 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.1797 1.0000 40 ce6_ct_phastv6officialfilt2_chrI.1799 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.1809 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.1812 1.0000 42
ce6_ct_phastv6officialfilt2_chrI.1824 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.1825 1.0000 77
ce6_ct_phastv6officialfilt2_chrI.1826 1.0000 37 ce6_ct_phastv6officialfilt2_chrI.1827 1.0000 21
ce6_ct_phastv6officialfilt2_chrI.1922 1.0000 55 ce6_ct_phastv6officialfilt2_chrI.1949 1.0000 29
ce6_ct_phastv6officialfilt2_chrI.1950 1.0000 21 ce6_ct_phastv6officialfilt2_chrI.1958 1.0000 24
ce6_ct_phastv6officialfilt2_chrI.2000 1.0000 58 ce6_ct_phastv6officialfilt2_chrI.2018 1.0000 36
ce6_ct_phastv6officialfilt2_chrI.2057 1.0000 40 ce6_ct_phastv6officialfilt2_chrI.2099 1.0000 31
ce6_ct_phastv6officialfilt2_chrI.2125 1.0000 32 ce6_ct_phastv6officialfilt2_chrI.2151 1.0000 34
ce6_ct_phastv6officialfilt2_chrI.2170 1.0000 27 ce6_ct_phastv6officialfilt2_chrI.2192 1.0000 25
ce6_ct_phastv6officialfilt2_chrI.2215 1.0000 38 ce6_ct_phastv6officialfilt2_chrI.2273 1.0000 41
ce6_ct_phastv6officialfilt2_chrI.2409 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.2421 1.0000 29
ce6_ct_phastv6officialfilt2_chrI.2425 1.0000 46 ce6_ct_phastv6officialfilt2_chrI.2439 1.0000 40
ce6_ct_phastv6officialfilt2_chrI.2441 1.0000 32 ce6_ct_phastv6officialfilt2_chrI.2447 1.0000 32
ce6_ct_phastv6officialfilt2_chrI.2466 1.0000 35 ce6_ct_phastv6officialfilt2_chrI.2500 1.0000 42
ce6_ct_phastv6officialfilt2_chrI.2503 1.0000 37 ce6_ct_phastv6officialfilt2_chrI.2504 1.0000 40
ce6_ct_phastv6officialfilt2_chrI.2609 1.0000 44 ce6_ct_phastv6officialfilt2_chrI.2675 1.0000 51
ce6_ct_phastv6officialfilt2_chrI.2711 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.2733 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.2734 1.0000 62 ce6_ct_phastv6officialfilt2_chrI.2735 1.0000 42
ce6_ct_phastv6officialfilt2_chrI.2757 1.0000 58 ce6_ct_phastv6officialfilt2_chrI.2764 1.0000 57
ce6_ct_phastv6officialfilt2_chrI.2771 1.0000 52 ce6_ct_phastv6officialfilt2_chrI.2819 1.0000 37
ce6_ct_phastv6officialfilt2_chrI.2821 1.0000 40 ce6_ct_phastv6officialfilt2_chrI.2847 1.0000 31
ce6_ct_phastv6officialfilt2_chrI.2864 1.0000 39 ce6_ct_phastv6officialfilt2_chrI.2918 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.2921 1.0000 32 ce6_ct_phastv6officialfilt2_chrI.2937 1.0000 40
ce6_ct_phastv6officialfilt2_chrI.3058 1.0000 32 ce6_ct_phastv6officialfilt2_chrI.3068 1.0000 46
ce6_ct_phastv6officialfilt2_chrI.3075 1.0000 23 ce6_ct_phastv6officialfilt2_chrI.3134 1.0000 32
ce6_ct_phastv6officialfilt2_chrI.3163 1.0000 22 ce6_ct_phastv6officialfilt2_chrI.3184 1.0000 49
ce6_ct_phastv6officialfilt2_chrI.3230 1.0000 39 ce6_ct_phastv6officialfilt2_chrI.3232 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.3377 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.3379 1.0000 29
ce6_ct_phastv6officialfilt2_chrI.3512 1.0000 46 ce6_ct_phastv6officialfilt2_chrI.3582 1.0000 32
ce6_ct_phastv6officialfilt2_chrI.3583 1.0000 41 ce6_ct_phastv6officialfilt2_chrI.3594 1.0000 47
ce6_ct_phastv6officialfilt2_chrI.3637 1.0000 44 ce6_ct_phastv6officialfilt2_chrI.3698 1.0000 40
ce6_ct_phastv6officialfilt2_chrI.3782 1.0000 20 ce6_ct_phastv6officialfilt2_chrI.3814 1.0000 35
ce6_ct_phastv6officialfilt2_chrI.3828 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.3923 1.0000 40
ce6_ct_phastv6officialfilt2_chrI.4080 1.0000 34 ce6_ct_phastv6officialfilt2_chrI.4128 1.0000 39
ce6_ct_phastv6officialfilt2_chrI.4172 1.0000 21 ce6_ct_phastv6officialfilt2_chrI.4184 1.0000 60
ce6_ct_phastv6officialfilt2_chrI.4239 1.0000 51 ce6_ct_phastv6officialfilt2_chrI.4272 1.0000 27
ce6_ct_phastv6officialfilt2_chrI.4293 1.0000 23 ce6_ct_phastv6officialfilt2_chrI.4300 1.0000 22
ce6_ct_phastv6officialfilt2_chrI.4301 1.0000 23 ce6_ct_phastv6officialfilt2_chrI.4342 1.0000 45
ce6_ct_phastv6officialfilt2_chrI.4343 1.0000 45 ce6_ct_phastv6officialfilt2_chrI.4344 1.0000 34
ce6_ct_phastv6officialfilt2_chrI.4345 1.0000 46 ce6_ct_phastv6officialfilt2_chrI.4526 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.4611 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.4619 1.0000 34
ce6_ct_phastv6officialfilt2_chrI.4685 1.0000 41 ce6_ct_phastv6officialfilt2_chrI.4686 1.0000 43
ce6_ct_phastv6officialfilt2_chrI.4691 1.0000 23 ce6_ct_phastv6officialfilt2_chrI.4728 1.0000 35
ce6_ct_phastv6officialfilt2_chrI.4760 1.0000 48 ce6_ct_phastv6officialfilt2_chrI.4778 1.0000 27
ce6_ct_phastv6officialfilt2_chrI.4808 1.0000 44 ce6_ct_phastv6officialfilt2_chrI.4940 1.0000 43
ce6_ct_phastv6officialfilt2_chrI.4942 1.0000 44 ce6_ct_phastv6officialfilt2_chrI.4958 1.0000 27
ce6_ct_phastv6officialfilt2_chrI.4972 1.0000 28 ce6_ct_phastv6officialfilt2_chrI.4984 1.0000 29
ce6_ct_phastv6officialfilt2_chrI.5084 1.0000 28 ce6_ct_phastv6officialfilt2_chrI.5104 1.0000 36
ce6_ct_phastv6officialfilt2_chrI.5121 1.0000 64 ce6_ct_phastv6officialfilt2_chrI.5273 1.0000 25
ce6_ct_phastv6officialfilt2_chrI.5286 1.0000 36 ce6_ct_phastv6officialfilt2_chrI.5308 1.0000 64
ce6_ct_phastv6officialfilt2_chrI.5385 1.0000 21 ce6_ct_phastv6officialfilt2_chrI.5415 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.5596 1.0000 35 ce6_ct_phastv6officialfilt2_chrI.5617 1.0000 30
ce6_ct_phastv6officialfilt2_chrI.5799 1.0000 54 ce6_ct_phastv6officialfilt2_chrI.5816 1.0000 39
ce6_ct_phastv6officialfilt2_chrI.5960 1.0000 37 ce6_ct_phastv6officialfilt2_chrI.6128 1.0000 22
ce6_ct_phastv6officialfilt2_chrI.6208 1.0000 43 ce6_ct_phastv6officialfilt2_chrI.6209 1.0000 46
ce6_ct_phastv6officialfilt2_chrI.6215 1.0000 34 ce6_ct_phastv6officialfilt2_chrI.6226 1.0000 48
ce6_ct_phastv6officialfilt2_chrI.6287 1.0000 44 ce6_ct_phastv6officialfilt2_chrI.6432 1.0000 27
ce6_ct_phastv6officialfilt2_chrI.6557 1.0000 22 ce6_ct_phastv6officialfilt2_chrI.6624 1.0000 65
ce6_ct_phastv6officialfilt2_chrI.6720 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.6736 1.0000 29
ce6_ct_phastv6officialfilt2_chrI.6790 1.0000 32 ce6_ct_phastv6officialfilt2_chrI.6804 1.0000 32
ce6_ct_phastv6officialfilt2_chrI.6853 1.0000 39 ce6_ct_phastv6officialfilt2_chrI.6982 1.0000 30
ce6_ct_phastv6officialfilt2_chrI.7045 1.0000 31 ce6_ct_phastv6officialfilt2_chrI.7046 1.0000 77
ce6_ct_phastv6officialfilt2_chrI.7047 1.0000 23 ce6_ct_phastv6officialfilt2_chrI.7097 1.0000 28
ce6_ct_phastv6officialfilt2_chrI.7276 1.0000 44 ce6_ct_phastv6officialfilt2_chrI.7498 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.7499 1.0000 49 ce6_ct_phastv6officialfilt2_chrI.7500 1.0000 24
ce6_ct_phastv6officialfilt2_chrI.7529 1.0000 35 ce6_ct_phastv6officialfilt2_chrI.7622 1.0000 22
ce6_ct_phastv6officialfilt2_chrI.7798 1.0000 20 ce6_ct_phastv6officialfilt2_chrI.7799 1.0000 46
ce6_ct_phastv6officialfilt2_chrI.7821 1.0000 44 ce6_ct_phastv6officialfilt2_chrI.7824 1.0000 50
ce6_ct_phastv6officialfilt2_chrI.7827 1.0000 32 ce6_ct_phastv6officialfilt2_chrI.7828 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.7829 1.0000 42 ce6_ct_phastv6officialfilt2_chrI.7866 1.0000 35
ce6_ct_phastv6officialfilt2_chrI.7867 1.0000 25 ce6_ct_phastv6officialfilt2_chrI.7888 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.7889 1.0000 39 ce6_ct_phastv6officialfilt2_chrI.7901 1.0000 45
ce6_ct_phastv6officialfilt2_chrI.7995 1.0000 51 ce6_ct_phastv6officialfilt2_chrI.8078 1.0000 36
ce6_ct_phastv6officialfilt2_chrI.8155 1.0000 69 ce6_ct_phastv6officialfilt2_chrI.8200 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.8209 1.0000 32 ce6_ct_phastv6officialfilt2_chrI.8272 1.0000 35
ce6_ct_phastv6officialfilt2_chrI.8406 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.8488 1.0000 43
ce6_ct_phastv6officialfilt2_chrI.8489 1.0000 36 ce6_ct_phastv6officialfilt2_chrI.8562 1.0000 35
ce6_ct_phastv6officialfilt2_chrI.8573 1.0000 24 ce6_ct_phastv6officialfilt2_chrI.8611 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.8900 1.0000 23 ce6_ct_phastv6officialfilt2_chrI.8922 1.0000 45
ce6_ct_phastv6officialfilt2_chrI.9050 1.0000 36 ce6_ct_phastv6officialfilt2_chrI.9054 1.0000 54
ce6_ct_phastv6officialfilt2_chrI.9233 1.0000 34 ce6_ct_phastv6officialfilt2_chrI.9249 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.9282 1.0000 41 ce6_ct_phastv6officialfilt2_chrI.9298 1.0000 35
ce6_ct_phastv6officialfilt2_chrI.9320 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.9453 1.0000 39
ce6_ct_phastv6officialfilt2_chrI.9498 1.0000 20 ce6_ct_phastv6officialfilt2_chrI.9499 1.0000 21
ce6_ct_phastv6officialfilt2_chrI.9602 1.0000 38 ce6_ct_phastv6officialfilt2_chrI.9674 1.0000 36
ce6_ct_phastv6officialfilt2_chrI.9678 1.0000 31 ce6_ct_phastv6officialfilt2_chrI.9716 1.0000 25
ce6_ct_phastv6officialfilt2_chrI.9757 1.0000 52 ce6_ct_phastv6officialfilt2_chrI.9891 1.0000 45
ce6_ct_phastv6officialfilt2_chrI.10070 1.0000 79 ce6_ct_phastv6officialfilt2_chrI.10136 1.0000 44
ce6_ct_phastv6officialfilt2_chrI.10233 1.0000 36 ce6_ct_phastv6officialfilt2_chrI.10234 1.0000 22
ce6_ct_phastv6officialfilt2_chrI.10306 1.0000 38 ce6_ct_phastv6officialfilt2_chrI.10383 1.0000 22
ce6_ct_phastv6officialfilt2_chrI.10584 1.0000 82 ce6_ct_phastv6officialfilt2_chrI.10589 1.0000 28
ce6_ct_phastv6officialfilt2_chrI.10789 1.0000 35 ce6_ct_phastv6officialfilt2_chrI.10967 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.11005 1.0000 22 ce6_ct_phastv6officialfilt2_chrI.11096 1.0000 48
ce6_ct_phastv6officialfilt2_chrI.11100 1.0000 27 ce6_ct_phastv6officialfilt2_chrI.11293 1.0000 30
ce6_ct_phastv6officialfilt2_chrI.11356 1.0000 51 ce6_ct_phastv6officialfilt2_chrI.11394 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.11403 1.0000 115 ce6_ct_phastv6officialfilt2_chrI.11433 1.0000 41
ce6_ct_phastv6officialfilt2_chrI.11497 1.0000 28 ce6_ct_phastv6officialfilt2_chrI.11498 1.0000 37
ce6_ct_phastv6officialfilt2_chrI.11509 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.11528 1.0000 31
ce6_ct_phastv6officialfilt2_chrI.11535 1.0000 29 ce6_ct_phastv6officialfilt2_chrI.11536 1.0000 40
ce6_ct_phastv6officialfilt2_chrI.11551 1.0000 57 ce6_ct_phastv6officialfilt2_chrI.11616 1.0000 29
ce6_ct_phastv6officialfilt2_chrI.11722 1.0000 45 ce6_ct_phastv6officialfilt2_chrI.11772 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.11780 1.0000 35 ce6_ct_phastv6officialfilt2_chrI.11809 1.0000 24
ce6_ct_phastv6officialfilt2_chrI.11889 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.11894 1.0000 43
ce6_ct_phastv6officialfilt2_chrI.11902 1.0000 45 ce6_ct_phastv6officialfilt2_chrI.11903 1.0000 63
ce6_ct_phastv6officialfilt2_chrI.11927 1.0000 30 ce6_ct_phastv6officialfilt2_chrI.11928 1.0000 50
ce6_ct_phastv6officialfilt2_chrI.11965 1.0000 31 ce6_ct_phastv6officialfilt2_chrI.11992 1.0000 48
ce6_ct_phastv6officialfilt2_chrI.11993 1.0000 46 ce6_ct_phastv6officialfilt2_chrI.12160 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.12166 1.0000 83 ce6_ct_phastv6officialfilt2_chrI.12201 1.0000 21
ce6_ct_phastv6officialfilt2_chrI.12202 1.0000 41 ce6_ct_phastv6officialfilt2_chrI.12253 1.0000 20
ce6_ct_phastv6officialfilt2_chrI.12254 1.0000 22 ce6_ct_phastv6officialfilt2_chrI.12299 1.0000 30
ce6_ct_phastv6officialfilt2_chrI.12369 1.0000 54 ce6_ct_phastv6officialfilt2_chrI.12391 1.0000 28
ce6_ct_phastv6officialfilt2_chrI.12478 1.0000 44 ce6_ct_phastv6officialfilt2_chrI.12479 1.0000 49
ce6_ct_phastv6officialfilt2_chrI.12538 1.0000 20 ce6_ct_phastv6officialfilt2_chrI.12706 1.0000 50
ce6_ct_phastv6officialfilt2_chrI.12887 1.0000 34 ce6_ct_phastv6officialfilt2_chrI.12915 1.0000 38
ce6_ct_phastv6officialfilt2_chrI.12959 1.0000 20 ce6_ct_phastv6officialfilt2_chrI.13067 1.0000 45
ce6_ct_phastv6officialfilt2_chrI.13090 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.13127 1.0000 28
ce6_ct_phastv6officialfilt2_chrI.13145 1.0000 30 ce6_ct_phastv6officialfilt2_chrI.13147 1.0000 48
ce6_ct_phastv6officialfilt2_chrI.13183 1.0000 48 ce6_ct_phastv6officialfilt2_chrI.13190 1.0000 39
ce6_ct_phastv6officialfilt2_chrI.13222 1.0000 31 ce6_ct_phastv6officialfilt2_chrI.13223 1.0000 25
ce6_ct_phastv6officialfilt2_chrI.13234 1.0000 24 ce6_ct_phastv6officialfilt2_chrI.13235 1.0000 30
ce6_ct_phastv6officialfilt2_chrI.13256 1.0000 42 ce6_ct_phastv6officialfilt2_chrI.13272 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.13275 1.0000 29 ce6_ct_phastv6officialfilt2_chrI.13291 1.0000 48
ce6_ct_phastv6officialfilt2_chrI.13293 1.0000 54 ce6_ct_phastv6officialfilt2_chrI.13299 1.0000 46
ce6_ct_phastv6officialfilt2_chrI.13300 1.0000 31 ce6_ct_phastv6officialfilt2_chrI.13306 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.13309 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.13329 1.0000 36
ce6_ct_phastv6officialfilt2_chrI.13335 1.0000 37 ce6_ct_phastv6officialfilt2_chrI.13339 1.0000 20
ce6_ct_phastv6officialfilt2_chrI.13340 1.0000 24 ce6_ct_phastv6officialfilt2_chrI.13342 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.13344 1.0000 27 ce6_ct_phastv6officialfilt2_chrI.13345 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.13350 1.0000 46 ce6_ct_phastv6officialfilt2_chrI.13354 1.0000 38
ce6_ct_phastv6officialfilt2_chrI.13395 1.0000 45 ce6_ct_phastv6officialfilt2_chrI.13416 1.0000 35
ce6_ct_phastv6officialfilt2_chrI.13428 1.0000 27 ce6_ct_phastv6officialfilt2_chrI.13501 1.0000 20
ce6_ct_phastv6officialfilt2_chrI.13504 1.0000 25 ce6_ct_phastv6officialfilt2_chrI.13514 1.0000 29
ce6_ct_phastv6officialfilt2_chrI.13529 1.0000 20 ce6_ct_phastv6officialfilt2_chrI.13530 1.0000 24
ce6_ct_phastv6officialfilt2_chrI.13531 1.0000 25 ce6_ct_phastv6officialfilt2_chrI.13537 1.0000 29
ce6_ct_phastv6officialfilt2_chrI.13544 1.0000 31 ce6_ct_phastv6officialfilt2_chrI.13554 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.13565 1.0000 45 ce6_ct_phastv6officialfilt2_chrI.13597 1.0000 28
ce6_ct_phastv6officialfilt2_chrI.13611 1.0000 36 ce6_ct_phastv6officialfilt2_chrI.13686 1.0000 43
ce6_ct_phastv6officialfilt2_chrI.13699 1.0000 42 ce6_ct_phastv6officialfilt2_chrI.13707 1.0000 29
ce6_ct_phastv6officialfilt2_chrI.13708 1.0000 38 ce6_ct_phastv6officialfilt2_chrI.13736 1.0000 56
ce6_ct_phastv6officialfilt2_chrI.13778 1.0000 27 ce6_ct_phastv6officialfilt2_chrI.13802 1.0000 74
ce6_ct_phastv6officialfilt2_chrI.13807 1.0000 21 ce6_ct_phastv6officialfilt2_chrI.13809 1.0000 46
ce6_ct_phastv6officialfilt2_chrI.13817 1.0000 30 ce6_ct_phastv6officialfilt2_chrI.13846 1.0000 37
ce6_ct_phastv6officialfilt2_chrI.13855 1.0000 25 ce6_ct_phastv6officialfilt2_chrI.13873 1.0000 47
ce6_ct_phastv6officialfilt2_chrI.13875 1.0000 37 ce6_ct_phastv6officialfilt2_chrI.13883 1.0000 28
ce6_ct_phastv6officialfilt2_chrI.13925 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.13936 1.0000 27
ce6_ct_phastv6officialfilt2_chrI.13938 1.0000 35 ce6_ct_phastv6officialfilt2_chrI.13957 1.0000 42
ce6_ct_phastv6officialfilt2_chrI.13974 1.0000 23 ce6_ct_phastv6officialfilt2_chrI.13983 1.0000 31
ce6_ct_phastv6officialfilt2_chrI.14029 1.0000 23 ce6_ct_phastv6officialfilt2_chrI.14038 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.14046 1.0000 31 ce6_ct_phastv6officialfilt2_chrI.14072 1.0000 49
ce6_ct_phastv6officialfilt2_chrI.14073 1.0000 47 ce6_ct_phastv6officialfilt2_chrI.14074 1.0000 41
ce6_ct_phastv6officialfilt2_chrI.14085 1.0000 55 ce6_ct_phastv6officialfilt2_chrI.14086 1.0000 25
ce6_ct_phastv6officialfilt2_chrI.14089 1.0000 28 ce6_ct_phastv6officialfilt2_chrI.14090 1.0000 32
ce6_ct_phastv6officialfilt2_chrI.14091 1.0000 35 ce6_ct_phastv6officialfilt2_chrI.14095 1.0000 38
ce6_ct_phastv6officialfilt2_chrI.14105 1.0000 32 ce6_ct_phastv6officialfilt2_chrI.14121 1.0000 49
ce6_ct_phastv6officialfilt2_chrI.14140 1.0000 37 ce6_ct_phastv6officialfilt2_chrI.14144 1.0000 49
ce6_ct_phastv6officialfilt2_chrI.14146 1.0000 61 ce6_ct_phastv6officialfilt2_chrI.14150 1.0000 27
ce6_ct_phastv6officialfilt2_chrI.14161 1.0000 50 ce6_ct_phastv6officialfilt2_chrI.14162 1.0000 41
ce6_ct_phastv6officialfilt2_chrI.14220 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.14230 1.0000 39
ce6_ct_phastv6officialfilt2_chrI.14329 1.0000 25 ce6_ct_phastv6officialfilt2_chrI.14461 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.14462 1.0000 37 ce6_ct_phastv6officialfilt2_chrI.14470 1.0000 25
ce6_ct_phastv6officialfilt2_chrI.14502 1.0000 47 ce6_ct_phastv6officialfilt2_chrI.14528 1.0000 51
ce6_ct_phastv6officialfilt2_chrI.14543 1.0000 40 ce6_ct_phastv6officialfilt2_chrI.14548 1.0000 22
ce6_ct_phastv6officialfilt2_chrI.14549 1.0000 27 ce6_ct_phastv6officialfilt2_chrI.14560 1.0000 70
ce6_ct_phastv6officialfilt2_chrI.14561 1.0000 41 ce6_ct_phastv6officialfilt2_chrI.14578 1.0000 28
ce6_ct_phastv6officialfilt2_chrI.14586 1.0000 46 ce6_ct_phastv6officialfilt2_chrI.14667 1.0000 21
ce6_ct_phastv6officialfilt2_chrI.14668 1.0000 31 ce6_ct_phastv6officialfilt2_chrI.14715 1.0000 36
ce6_ct_phastv6officialfilt2_chrI.14737 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.14780 1.0000 31
ce6_ct_phastv6officialfilt2_chrI.14783 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.14785 1.0000 35
ce6_ct_phastv6officialfilt2_chrI.14800 1.0000 23 ce6_ct_phastv6officialfilt2_chrI.14829 1.0000 43
ce6_ct_phastv6officialfilt2_chrI.14876 1.0000 21 ce6_ct_phastv6officialfilt2_chrI.14943 1.0000 40
ce6_ct_phastv6officialfilt2_chrI.15002 1.0000 29 ce6_ct_phastv6officialfilt2_chrI.15033 1.0000 25
ce6_ct_phastv6officialfilt2_chrI.15062 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.15129 1.0000 23
ce6_ct_phastv6officialfilt2_chrI.15133 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.15138 1.0000 37
ce6_ct_phastv6officialfilt2_chrI.15158 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.15165 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.15202 1.0000 51 ce6_ct_phastv6officialfilt2_chrI.15211 1.0000 37
ce6_ct_phastv6officialfilt2_chrI.15267 1.0000 45 ce6_ct_phastv6officialfilt2_chrI.15268 1.0000 49
ce6_ct_phastv6officialfilt2_chrI.15272 1.0000 39 ce6_ct_phastv6officialfilt2_chrI.15274 1.0000 70
ce6_ct_phastv6officialfilt2_chrI.15289 1.0000 24 ce6_ct_phastv6officialfilt2_chrI.15293 1.0000 31
ce6_ct_phastv6officialfilt2_chrI.15322 1.0000 33 ce6_ct_phastv6officialfilt2_chrI.15367 1.0000 32
ce6_ct_phastv6officialfilt2_chrI.15380 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.15386 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.15401 1.0000 25 ce6_ct_phastv6officialfilt2_chrI.15425 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.15443 1.0000 36 ce6_ct_phastv6officialfilt2_chrI.15445 1.0000 29
ce6_ct_phastv6officialfilt2_chrI.15484 1.0000 29 ce6_ct_phastv6officialfilt2_chrI.15506 1.0000 28
ce6_ct_phastv6officialfilt2_chrI.15557 1.0000 65 ce6_ct_phastv6officialfilt2_chrI.15600 1.0000 37
ce6_ct_phastv6officialfilt2_chrI.15654 1.0000 40 ce6_ct_phastv6officialfilt2_chrI.15668 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.15672 1.0000 26 ce6_ct_phastv6officialfilt2_chrI.15679 1.0000 26
ce6_ct_phastv6officialfilt2_chrI.15726 1.0000 30 ce6_ct_phastv6officialfilt2_chrI.15784 1.0000 34
ce6_ct_phastv6officialfilt2_chrI.15838 1.0000 35 ce6_ct_phastv6officialfilt2_chrI.15851 1.0000 31
ce6_ct_phastv6officialfilt2_chrI.15989 1.0000 40 ce6_ct_phastv6officialfilt2_chrI.15990 1.0000 46
ce6_ct_phastv6officialfilt2_chrI.16043 1.0000 39 ce6_ct_phastv6officialfilt2_chrI.16159 1.0000 33
ce6_ct_phastv6officialfilt2_chrI.16162 1.0000 39 ce6_ct_phastv6officialfilt2_chrI.16295 1.0000 47
ce6_ct_phastv6officialfilt2_chrV.4089 1.0000 47 ce6_ct_phastv6officialfilt2_chrV.26 1.0000 48
ce6_ct_phastv6officialfilt2_chrV.53 1.0000 45 ce6_ct_phastv6officialfilt2_chrV.63 1.0000 52
ce6_ct_phastv6officialfilt2_chrV.82 1.0000 20 ce6_ct_phastv6officialfilt2_chrV.83 1.0000 37
ce6_ct_phastv6officialfilt2_chrV.101 1.0000 37 ce6_ct_phastv6officialfilt2_chrV.166 1.0000 27
ce6_ct_phastv6officialfilt2_chrV.199 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.210 1.0000 30
ce6_ct_phastv6officialfilt2_chrV.244 1.0000 25 ce6_ct_phastv6officialfilt2_chrV.278 1.0000 38
ce6_ct_phastv6officialfilt2_chrV.294 1.0000 26 ce6_ct_phastv6officialfilt2_chrV.355 1.0000 26
ce6_ct_phastv6officialfilt2_chrV.377 1.0000 32 ce6_ct_phastv6officialfilt2_chrV.439 1.0000 35
ce6_ct_phastv6officialfilt2_chrV.468 1.0000 47 ce6_ct_phastv6officialfilt2_chrV.476 1.0000 27
ce6_ct_phastv6officialfilt2_chrV.499 1.0000 44 ce6_ct_phastv6officialfilt2_chrV.522 1.0000 46
ce6_ct_phastv6officialfilt2_chrV.586 1.0000 35 ce6_ct_phastv6officialfilt2_chrV.587 1.0000 29
ce6_ct_phastv6officialfilt2_chrV.622 1.0000 35 ce6_ct_phastv6officialfilt2_chrV.687 1.0000 22
ce6_ct_phastv6officialfilt2_chrV.738 1.0000 44 ce6_ct_phastv6officialfilt2_chrV.794 1.0000 50
ce6_ct_phastv6officialfilt2_chrV.818 1.0000 24 ce6_ct_phastv6officialfilt2_chrV.864 1.0000 28
ce6_ct_phastv6officialfilt2_chrV.900 1.0000 41 ce6_ct_phastv6officialfilt2_chrV.1064 1.0000 31
ce6_ct_phastv6officialfilt2_chrV.1101 1.0000 45 ce6_ct_phastv6officialfilt2_chrV.1103 1.0000 31
ce6_ct_phastv6officialfilt2_chrV.1283 1.0000 32 ce6_ct_phastv6officialfilt2_chrV.1450 1.0000 28
ce6_ct_phastv6officialfilt2_chrV.1508 1.0000 26 ce6_ct_phastv6officialfilt2_chrV.1509 1.0000 39
ce6_ct_phastv6officialfilt2_chrV.1544 1.0000 24 ce6_ct_phastv6officialfilt2_chrV.1570 1.0000 33
ce6_ct_phastv6officialfilt2_chrV.1640 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.1683 1.0000 42
ce6_ct_phastv6officialfilt2_chrV.1698 1.0000 50 ce6_ct_phastv6officialfilt2_chrV.1722 1.0000 33
ce6_ct_phastv6officialfilt2_chrV.1790 1.0000 27 ce6_ct_phastv6officialfilt2_chrV.1793 1.0000 32
ce6_ct_phastv6officialfilt2_chrV.1844 1.0000 28 ce6_ct_phastv6officialfilt2_chrV.1854 1.0000 30
ce6_ct_phastv6officialfilt2_chrV.2003 1.0000 23 ce6_ct_phastv6officialfilt2_chrV.2007 1.0000 49
ce6_ct_phastv6officialfilt2_chrV.2012 1.0000 45 ce6_ct_phastv6officialfilt2_chrV.2033 1.0000 33
ce6_ct_phastv6officialfilt2_chrV.2034 1.0000 83 ce6_ct_phastv6officialfilt2_chrV.2067 1.0000 24
ce6_ct_phastv6officialfilt2_chrV.2151 1.0000 40 ce6_ct_phastv6officialfilt2_chrV.2153 1.0000 42
ce6_ct_phastv6officialfilt2_chrV.2206 1.0000 53 ce6_ct_phastv6officialfilt2_chrV.2207 1.0000 23
ce6_ct_phastv6officialfilt2_chrV.2208 1.0000 25 ce6_ct_phastv6officialfilt2_chrV.2218 1.0000 43
ce6_ct_phastv6officialfilt2_chrV.2219 1.0000 27 ce6_ct_phastv6officialfilt2_chrV.2230 1.0000 27
ce6_ct_phastv6officialfilt2_chrV.2236 1.0000 31 ce6_ct_phastv6officialfilt2_chrV.2298 1.0000 54
ce6_ct_phastv6officialfilt2_chrV.2317 1.0000 39 ce6_ct_phastv6officialfilt2_chrV.2336 1.0000 53
ce6_ct_phastv6officialfilt2_chrV.2353 1.0000 33 ce6_ct_phastv6officialfilt2_chrV.2379 1.0000 27
ce6_ct_phastv6officialfilt2_chrV.2408 1.0000 23 ce6_ct_phastv6officialfilt2_chrV.2409 1.0000 23
ce6_ct_phastv6officialfilt2_chrV.2440 1.0000 54 ce6_ct_phastv6officialfilt2_chrV.2447 1.0000 33
ce6_ct_phastv6officialfilt2_chrV.2453 1.0000 56 ce6_ct_phastv6officialfilt2_chrV.2473 1.0000 41
ce6_ct_phastv6officialfilt2_chrV.2481 1.0000 53 ce6_ct_phastv6officialfilt2_chrV.2498 1.0000 62
ce6_ct_phastv6officialfilt2_chrV.2510 1.0000 39 ce6_ct_phastv6officialfilt2_chrV.2520 1.0000 48
ce6_ct_phastv6officialfilt2_chrV.2559 1.0000 46 ce6_ct_phastv6officialfilt2_chrV.2594 1.0000 40
ce6_ct_phastv6officialfilt2_chrV.2758 1.0000 48 ce6_ct_phastv6officialfilt2_chrV.2760 1.0000 43
ce6_ct_phastv6officialfilt2_chrV.2805 1.0000 31 ce6_ct_phastv6officialfilt2_chrV.2812 1.0000 27
ce6_ct_phastv6officialfilt2_chrV.2838 1.0000 38 ce6_ct_phastv6officialfilt2_chrV.2885 1.0000 47
ce6_ct_phastv6officialfilt2_chrV.2897 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.2953 1.0000 40
ce6_ct_phastv6officialfilt2_chrV.3017 1.0000 41 ce6_ct_phastv6officialfilt2_chrV.3039 1.0000 76
ce6_ct_phastv6officialfilt2_chrV.3054 1.0000 32 ce6_ct_phastv6officialfilt2_chrV.3170 1.0000 21
ce6_ct_phastv6officialfilt2_chrV.3227 1.0000 25 ce6_ct_phastv6officialfilt2_chrV.3276 1.0000 28
ce6_ct_phastv6officialfilt2_chrV.3288 1.0000 49 ce6_ct_phastv6officialfilt2_chrV.3312 1.0000 76
ce6_ct_phastv6officialfilt2_chrV.3313 1.0000 26 ce6_ct_phastv6officialfilt2_chrV.3337 1.0000 40
ce6_ct_phastv6officialfilt2_chrV.3423 1.0000 28 ce6_ct_phastv6officialfilt2_chrV.3425 1.0000 83
ce6_ct_phastv6officialfilt2_chrV.3426 1.0000 50 ce6_ct_phastv6officialfilt2_chrV.3485 1.0000 36
ce6_ct_phastv6officialfilt2_chrV.3603 1.0000 44 ce6_ct_phastv6officialfilt2_chrV.3608 1.0000 34
ce6_ct_phastv6officialfilt2_chrV.3653 1.0000 82 ce6_ct_phastv6officialfilt2_chrV.3660 1.0000 40
ce6_ct_phastv6officialfilt2_chrV.3723 1.0000 65 ce6_ct_phastv6officialfilt2_chrV.3724 1.0000 43
ce6_ct_phastv6officialfilt2_chrV.3725 1.0000 39 ce6_ct_phastv6officialfilt2_chrV.3745 1.0000 36
ce6_ct_phastv6officialfilt2_chrV.3878 1.0000 39 ce6_ct_phastv6officialfilt2_chrV.3879 1.0000 31
ce6_ct_phastv6officialfilt2_chrV.3880 1.0000 45 ce6_ct_phastv6officialfilt2_chrV.3995 1.0000 44
ce6_ct_phastv6officialfilt2_chrV.4066 1.0000 34 ce6_ct_phastv6officialfilt2_chrV.4090 1.0000 45
ce6_ct_phastv6officialfilt2_chrV.4121 1.0000 56 ce6_ct_phastv6officialfilt2_chrV.4143 1.0000 25
ce6_ct_phastv6officialfilt2_chrV.4144 1.0000 36 ce6_ct_phastv6officialfilt2_chrV.4306 1.0000 33
ce6_ct_phastv6officialfilt2_chrV.4346 1.0000 31 ce6_ct_phastv6officialfilt2_chrV.4358 1.0000 33
ce6_ct_phastv6officialfilt2_chrV.4371 1.0000 22 ce6_ct_phastv6officialfilt2_chrV.4402 1.0000 31
ce6_ct_phastv6officialfilt2_chrV.4408 1.0000 34 ce6_ct_phastv6officialfilt2_chrV.4430 1.0000 29
ce6_ct_phastv6officialfilt2_chrV.4527 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.4542 1.0000 26
ce6_ct_phastv6officialfilt2_chrV.4543 1.0000 32 ce6_ct_phastv6officialfilt2_chrV.4612 1.0000 44
ce6_ct_phastv6officialfilt2_chrV.4697 1.0000 19 ce6_ct_phastv6officialfilt2_chrV.4698 1.0000 37
ce6_ct_phastv6officialfilt2_chrV.4956 1.0000 58 ce6_ct_phastv6officialfilt2_chrV.4997 1.0000 27
ce6_ct_phastv6officialfilt2_chrV.5052 1.0000 40 ce6_ct_phastv6officialfilt2_chrV.5080 1.0000 22
ce6_ct_phastv6officialfilt2_chrV.5141 1.0000 24 ce6_ct_phastv6officialfilt2_chrV.5172 1.0000 54
ce6_ct_phastv6officialfilt2_chrV.5251 1.0000 25 ce6_ct_phastv6officialfilt2_chrV.5400 1.0000 39
ce6_ct_phastv6officialfilt2_chrV.5602 1.0000 24 ce6_ct_phastv6officialfilt2_chrV.5671 1.0000 52
ce6_ct_phastv6officialfilt2_chrV.5704 1.0000 44 ce6_ct_phastv6officialfilt2_chrV.5736 1.0000 44
ce6_ct_phastv6officialfilt2_chrV.5764 1.0000 42 ce6_ct_phastv6officialfilt2_chrV.5797 1.0000 26
ce6_ct_phastv6officialfilt2_chrV.5896 1.0000 31 ce6_ct_phastv6officialfilt2_chrV.5939 1.0000 22
ce6_ct_phastv6officialfilt2_chrV.6077 1.0000 66 ce6_ct_phastv6officialfilt2_chrV.6237 1.0000 60
ce6_ct_phastv6officialfilt2_chrV.6299 1.0000 41 ce6_ct_phastv6officialfilt2_chrV.6337 1.0000 25
ce6_ct_phastv6officialfilt2_chrV.6343 1.0000 19 ce6_ct_phastv6officialfilt2_chrV.6514 1.0000 41
ce6_ct_phastv6officialfilt2_chrV.6534 1.0000 54 ce6_ct_phastv6officialfilt2_chrV.6614 1.0000 27
ce6_ct_phastv6officialfilt2_chrV.6723 1.0000 24 ce6_ct_phastv6officialfilt2_chrV.6752 1.0000 44
ce6_ct_phastv6officialfilt2_chrV.6867 1.0000 30 ce6_ct_phastv6officialfilt2_chrV.6981 1.0000 30
ce6_ct_phastv6officialfilt2_chrV.7014 1.0000 23 ce6_ct_phastv6officialfilt2_chrV.7017 1.0000 38
ce6_ct_phastv6officialfilt2_chrV.7021 1.0000 22 ce6_ct_phastv6officialfilt2_chrV.7148 1.0000 67
ce6_ct_phastv6officialfilt2_chrV.7150 1.0000 45 ce6_ct_phastv6officialfilt2_chrV.7151 1.0000 29
ce6_ct_phastv6officialfilt2_chrV.7235 1.0000 31 ce6_ct_phastv6officialfilt2_chrV.7265 1.0000 25
ce6_ct_phastv6officialfilt2_chrV.7284 1.0000 28 ce6_ct_phastv6officialfilt2_chrV.7435 1.0000 38
ce6_ct_phastv6officialfilt2_chrV.7461 1.0000 38 ce6_ct_phastv6officialfilt2_chrV.7521 1.0000 22
ce6_ct_phastv6officialfilt2_chrV.7659 1.0000 36 ce6_ct_phastv6officialfilt2_chrV.7738 1.0000 37
ce6_ct_phastv6officialfilt2_chrV.7845 1.0000 23 ce6_ct_phastv6officialfilt2_chrV.7987 1.0000 23
ce6_ct_phastv6officialfilt2_chrV.8144 1.0000 61 ce6_ct_phastv6officialfilt2_chrV.8232 1.0000 44
ce6_ct_phastv6officialfilt2_chrV.8248 1.0000 28 ce6_ct_phastv6officialfilt2_chrV.8275 1.0000 30
ce6_ct_phastv6officialfilt2_chrV.8288 1.0000 35 ce6_ct_phastv6officialfilt2_chrV.8289 1.0000 38
ce6_ct_phastv6officialfilt2_chrV.8290 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.8291 1.0000 49
ce6_ct_phastv6officialfilt2_chrV.8301 1.0000 80 ce6_ct_phastv6officialfilt2_chrV.8309 1.0000 31
ce6_ct_phastv6officialfilt2_chrV.8395 1.0000 27 ce6_ct_phastv6officialfilt2_chrV.8396 1.0000 28
ce6_ct_phastv6officialfilt2_chrV.8397 1.0000 56 ce6_ct_phastv6officialfilt2_chrV.8451 1.0000 42
ce6_ct_phastv6officialfilt2_chrV.8452 1.0000 75 ce6_ct_phastv6officialfilt2_chrV.8455 1.0000 31
ce6_ct_phastv6officialfilt2_chrV.8459 1.0000 70 ce6_ct_phastv6officialfilt2_chrV.8467 1.0000 58
ce6_ct_phastv6officialfilt2_chrV.8468 1.0000 59 ce6_ct_phastv6officialfilt2_chrV.8495 1.0000 42
ce6_ct_phastv6officialfilt2_chrV.8496 1.0000 41 ce6_ct_phastv6officialfilt2_chrV.8524 1.0000 45
ce6_ct_phastv6officialfilt2_chrV.8666 1.0000 32 ce6_ct_phastv6officialfilt2_chrV.8667 1.0000 21
ce6_ct_phastv6officialfilt2_chrV.8744 1.0000 73 ce6_ct_phastv6officialfilt2_chrV.8796 1.0000 50
ce6_ct_phastv6officialfilt2_chrV.8801 1.0000 94 ce6_ct_phastv6officialfilt2_chrV.8802 1.0000 30
ce6_ct_phastv6officialfilt2_chrV.8813 1.0000 21 ce6_ct_phastv6officialfilt2_chrV.8870 1.0000 77
ce6_ct_phastv6officialfilt2_chrV.8919 1.0000 24 ce6_ct_phastv6officialfilt2_chrV.8952 1.0000 30
ce6_ct_phastv6officialfilt2_chrV.9107 1.0000 28 ce6_ct_phastv6officialfilt2_chrV.9108 1.0000 41
ce6_ct_phastv6officialfilt2_chrV.9109 1.0000 70 ce6_ct_phastv6officialfilt2_chrV.9110 1.0000 54
ce6_ct_phastv6officialfilt2_chrV.9143 1.0000 21 ce6_ct_phastv6officialfilt2_chrV.9384 1.0000 55
ce6_ct_phastv6officialfilt2_chrV.9441 1.0000 32 ce6_ct_phastv6officialfilt2_chrV.9442 1.0000 36
ce6_ct_phastv6officialfilt2_chrV.9444 1.0000 119 ce6_ct_phastv6officialfilt2_chrV.9480 1.0000 34
ce6_ct_phastv6officialfilt2_chrV.9486 1.0000 49 ce6_ct_phastv6officialfilt2_chrV.9493 1.0000 30
ce6_ct_phastv6officialfilt2_chrV.9496 1.0000 80 ce6_ct_phastv6officialfilt2_chrV.9497 1.0000 40
ce6_ct_phastv6officialfilt2_chrV.9499 1.0000 35 ce6_ct_phastv6officialfilt2_chrV.9601 1.0000 61
ce6_ct_phastv6officialfilt2_chrV.9602 1.0000 54 ce6_ct_phastv6officialfilt2_chrV.9603 1.0000 41
ce6_ct_phastv6officialfilt2_chrV.9604 1.0000 21 ce6_ct_phastv6officialfilt2_chrV.9629 1.0000 25
ce6_ct_phastv6officialfilt2_chrV.9647 1.0000 68 ce6_ct_phastv6officialfilt2_chrV.9675 1.0000 71
ce6_ct_phastv6officialfilt2_chrV.9734 1.0000 33 ce6_ct_phastv6officialfilt2_chrV.9745 1.0000 32
ce6_ct_phastv6officialfilt2_chrV.9783 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.9784 1.0000 33
ce6_ct_phastv6officialfilt2_chrV.9785 1.0000 36 ce6_ct_phastv6officialfilt2_chrV.9786 1.0000 29
ce6_ct_phastv6officialfilt2_chrV.9952 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.9976 1.0000 23
ce6_ct_phastv6officialfilt2_chrV.10040 1.0000 34 ce6_ct_phastv6officialfilt2_chrV.10271 1.0000 52
ce6_ct_phastv6officialfilt2_chrV.10333 1.0000 111 ce6_ct_phastv6officialfilt2_chrV.10420 1.0000 25
ce6_ct_phastv6officialfilt2_chrV.10450 1.0000 47 ce6_ct_phastv6officialfilt2_chrV.10496 1.0000 40
ce6_ct_phastv6officialfilt2_chrV.10498 1.0000 31 ce6_ct_phastv6officialfilt2_chrV.10511 1.0000 22
ce6_ct_phastv6officialfilt2_chrV.10518 1.0000 49 ce6_ct_phastv6officialfilt2_chrV.10533 1.0000 40
ce6_ct_phastv6officialfilt2_chrV.10545 1.0000 47 ce6_ct_phastv6officialfilt2_chrV.10766 1.0000 78
ce6_ct_phastv6officialfilt2_chrV.10935 1.0000 20 ce6_ct_phastv6officialfilt2_chrV.11032 1.0000 61
ce6_ct_phastv6officialfilt2_chrV.11034 1.0000 33 ce6_ct_phastv6officialfilt2_chrV.11093 1.0000 46
ce6_ct_phastv6officialfilt2_chrV.11106 1.0000 50 ce6_ct_phastv6officialfilt2_chrV.11123 1.0000 20
ce6_ct_phastv6officialfilt2_chrV.11159 1.0000 26 ce6_ct_phastv6officialfilt2_chrV.11273 1.0000 47
ce6_ct_phastv6officialfilt2_chrV.11275 1.0000 34 ce6_ct_phastv6officialfilt2_chrV.11276 1.0000 40
ce6_ct_phastv6officialfilt2_chrV.11316 1.0000 45 ce6_ct_phastv6officialfilt2_chrV.11318 1.0000 20
ce6_ct_phastv6officialfilt2_chrV.11398 1.0000 64 ce6_ct_phastv6officialfilt2_chrV.11524 1.0000 34
ce6_ct_phastv6officialfilt2_chrV.11577 1.0000 31 ce6_ct_phastv6officialfilt2_chrV.11604 1.0000 27
ce6_ct_phastv6officialfilt2_chrV.11664 1.0000 41 ce6_ct_phastv6officialfilt2_chrV.11665 1.0000 61
ce6_ct_phastv6officialfilt2_chrV.11689 1.0000 21 ce6_ct_phastv6officialfilt2_chrV.11723 1.0000 65
ce6_ct_phastv6officialfilt2_chrV.11724 1.0000 62 ce6_ct_phastv6officialfilt2_chrV.11725 1.0000 50
ce6_ct_phastv6officialfilt2_chrV.11911 1.0000 33 ce6_ct_phastv6officialfilt2_chrV.12017 1.0000 40
ce6_ct_phastv6officialfilt2_chrV.12018 1.0000 39 ce6_ct_phastv6officialfilt2_chrV.12290 1.0000 51
ce6_ct_phastv6officialfilt2_chrV.12336 1.0000 34 ce6_ct_phastv6officialfilt2_chrV.12341 1.0000 35
ce6_ct_phastv6officialfilt2_chrV.12410 1.0000 35 ce6_ct_phastv6officialfilt2_chrV.12414 1.0000 47
ce6_ct_phastv6officialfilt2_chrV.12415 1.0000 30 ce6_ct_phastv6officialfilt2_chrV.12491 1.0000 32
ce6_ct_phastv6officialfilt2_chrV.12706 1.0000 26 ce6_ct_phastv6officialfilt2_chrV.12715 1.0000 44
ce6_ct_phastv6officialfilt2_chrV.12867 1.0000 49 ce6_ct_phastv6officialfilt2_chrV.12924 1.0000 50
ce6_ct_phastv6officialfilt2_chrV.12976 1.0000 58 ce6_ct_phastv6officialfilt2_chrV.12978 1.0000 25
ce6_ct_phastv6officialfilt2_chrV.13127 1.0000 35 ce6_ct_phastv6officialfilt2_chrV.13179 1.0000 54
ce6_ct_phastv6officialfilt2_chrV.13334 1.0000 22 ce6_ct_phastv6officialfilt2_chrV.13569 1.0000 30
ce6_ct_phastv6officialfilt2_chrV.13678 1.0000 52 ce6_ct_phastv6officialfilt2_chrV.13711 1.0000 51
ce6_ct_phastv6officialfilt2_chrV.13735 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.13775 1.0000 38
ce6_ct_phastv6officialfilt2_chrV.13803 1.0000 21 ce6_ct_phastv6officialfilt2_chrV.13827 1.0000 40
ce6_ct_phastv6officialfilt2_chrV.13860 1.0000 36 ce6_ct_phastv6officialfilt2_chrV.13869 1.0000 48
ce6_ct_phastv6officialfilt2_chrV.13873 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.13950 1.0000 24
ce6_ct_phastv6officialfilt2_chrV.13954 1.0000 22 ce6_ct_phastv6officialfilt2_chrV.14024 1.0000 35
ce6_ct_phastv6officialfilt2_chrV.14030 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.14033 1.0000 27
ce6_ct_phastv6officialfilt2_chrV.14039 1.0000 27 ce6_ct_phastv6officialfilt2_chrV.14041 1.0000 23
ce6_ct_phastv6officialfilt2_chrV.14062 1.0000 22 ce6_ct_phastv6officialfilt2_chrV.14066 1.0000 33
ce6_ct_phastv6officialfilt2_chrV.14095 1.0000 23 ce6_ct_phastv6officialfilt2_chrV.14118 1.0000 28
ce6_ct_phastv6officialfilt2_chrV.14177 1.0000 26 ce6_ct_phastv6officialfilt2_chrV.14197 1.0000 33
ce6_ct_phastv6officialfilt2_chrV.14216 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.14231 1.0000 32
ce6_ct_phastv6officialfilt2_chrV.14232 1.0000 39 ce6_ct_phastv6officialfilt2_chrV.14237 1.0000 19
ce6_ct_phastv6officialfilt2_chrV.14264 1.0000 32 ce6_ct_phastv6officialfilt2_chrV.14276 1.0000 30
ce6_ct_phastv6officialfilt2_chrV.14294 1.0000 40 ce6_ct_phastv6officialfilt2_chrV.14298 1.0000 40
ce6_ct_phastv6officialfilt2_chrV.14300 1.0000 43 ce6_ct_phastv6officialfilt2_chrV.14305 1.0000 36
ce6_ct_phastv6officialfilt2_chrV.14306 1.0000 28 ce6_ct_phastv6officialfilt2_chrV.14313 1.0000 29
ce6_ct_phastv6officialfilt2_chrV.14328 1.0000 24 ce6_ct_phastv6officialfilt2_chrV.14339 1.0000 34
ce6_ct_phastv6officialfilt2_chrV.14356 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.14359 1.0000 22
ce6_ct_phastv6officialfilt2_chrV.14449 1.0000 44 ce6_ct_phastv6officialfilt2_chrV.14460 1.0000 27
ce6_ct_phastv6officialfilt2_chrV.14461 1.0000 39 ce6_ct_phastv6officialfilt2_chrV.14462 1.0000 42
ce6_ct_phastv6officialfilt2_chrV.14470 1.0000 28 ce6_ct_phastv6officialfilt2_chrV.14484 1.0000 26
ce6_ct_phastv6officialfilt2_chrV.14490 1.0000 25 ce6_ct_phastv6officialfilt2_chrV.14538 1.0000 21
ce6_ct_phastv6officialfilt2_chrV.14540 1.0000 38 ce6_ct_phastv6officialfilt2_chrV.14555 1.0000 24
ce6_ct_phastv6officialfilt2_chrV.14563 1.0000 44 ce6_ct_phastv6officialfilt2_chrV.14574 1.0000 41
ce6_ct_phastv6officialfilt2_chrV.14583 1.0000 48 ce6_ct_phastv6officialfilt2_chrV.14636 1.0000 28
ce6_ct_phastv6officialfilt2_chrV.14686 1.0000 25 ce6_ct_phastv6officialfilt2_chrV.14690 1.0000 41
ce6_ct_phastv6officialfilt2_chrV.14693 1.0000 25 ce6_ct_phastv6officialfilt2_chrV.14699 1.0000 39
ce6_ct_phastv6officialfilt2_chrV.14701 1.0000 25 ce6_ct_phastv6officialfilt2_chrV.14703 1.0000 42
ce6_ct_phastv6officialfilt2_chrV.14704 1.0000 31 ce6_ct_phastv6officialfilt2_chrV.14731 1.0000 22
ce6_ct_phastv6officialfilt2_chrV.14733 1.0000 38 ce6_ct_phastv6officialfilt2_chrV.14735 1.0000 48
ce6_ct_phastv6officialfilt2_chrV.14746 1.0000 26 ce6_ct_phastv6officialfilt2_chrV.14747 1.0000 37
ce6_ct_phastv6officialfilt2_chrV.14752 1.0000 44 ce6_ct_phastv6officialfilt2_chrV.14801 1.0000 36
ce6_ct_phastv6officialfilt2_chrV.14802 1.0000 41 ce6_ct_phastv6officialfilt2_chrV.14803 1.0000 29
ce6_ct_phastv6officialfilt2_chrV.14846 1.0000 23 ce6_ct_phastv6officialfilt2_chrV.14998 1.0000 29
ce6_ct_phastv6officialfilt2_chrV.15000 1.0000 22 ce6_ct_phastv6officialfilt2_chrV.15001 1.0000 35
ce6_ct_phastv6officialfilt2_chrV.15020 1.0000 39 ce6_ct_phastv6officialfilt2_chrV.15048 1.0000 57
ce6_ct_phastv6officialfilt2_chrV.15065 1.0000 24 ce6_ct_phastv6officialfilt2_chrV.15121 1.0000 32
ce6_ct_phastv6officialfilt2_chrV.15149 1.0000 40 ce6_ct_phastv6officialfilt2_chrV.15156 1.0000 36
ce6_ct_phastv6officialfilt2_chrV.15164 1.0000 49 ce6_ct_phastv6officialfilt2_chrV.15165 1.0000 33
ce6_ct_phastv6officialfilt2_chrV.15166 1.0000 28 ce6_ct_phastv6officialfilt2_chrV.15178 1.0000 34
ce6_ct_phastv6officialfilt2_chrV.15180 1.0000 31 ce6_ct_phastv6officialfilt2_chrV.15183 1.0000 23
ce6_ct_phastv6officialfilt2_chrV.15212 1.0000 38 ce6_ct_phastv6officialfilt2_chrV.15278 1.0000 26
ce6_ct_phastv6officialfilt2_chrV.15281 1.0000 33 ce6_ct_phastv6officialfilt2_chrV.15301 1.0000 51
ce6_ct_phastv6officialfilt2_chrV.15302 1.0000 27 ce6_ct_phastv6officialfilt2_chrV.15315 1.0000 31
ce6_ct_phastv6officialfilt2_chrV.15345 1.0000 29 ce6_ct_phastv6officialfilt2_chrV.15356 1.0000 42
ce6_ct_phastv6officialfilt2_chrV.15387 1.0000 28 ce6_ct_phastv6officialfilt2_chrV.15397 1.0000 29
ce6_ct_phastv6officialfilt2_chrV.15402 1.0000 39 ce6_ct_phastv6officialfilt2_chrV.15409 1.0000 69
ce6_ct_phastv6officialfilt2_chrV.15410 1.0000 42 ce6_ct_phastv6officialfilt2_chrV.15493 1.0000 20
ce6_ct_phastv6officialfilt2_chrV.15625 1.0000 37 ce6_ct_phastv6officialfilt2_chrV.15629 1.0000 38
ce6_ct_phastv6officialfilt2_chrV.15644 1.0000 45 ce6_ct_phastv6officialfilt2_chrV.15728 1.0000 37
ce6_ct_phastv6officialfilt2_chrX.13 1.0000 25 ce6_ct_phastv6officialfilt2_chrX.39 1.0000 35
ce6_ct_phastv6officialfilt2_chrX.40 1.0000 30 ce6_ct_phastv6officialfilt2_chrX.41 1.0000 25
ce6_ct_phastv6officialfilt2_chrX.51 1.0000 48 ce6_ct_phastv6officialfilt2_chrX.52 1.0000 21
ce6_ct_phastv6officialfilt2_chrX.53 1.0000 39 ce6_ct_phastv6officialfilt2_chrX.56 1.0000 37
ce6_ct_phastv6officialfilt2_chrX.59 1.0000 24 ce6_ct_phastv6officialfilt2_chrX.78 1.0000 49
ce6_ct_phastv6officialfilt2_chrX.87 1.0000 24 ce6_ct_phastv6officialfilt2_chrX.88 1.0000 39
ce6_ct_phastv6officialfilt2_chrX.189 1.0000 73 ce6_ct_phastv6officialfilt2_chrX.190 1.0000 47
ce6_ct_phastv6officialfilt2_chrX.262 1.0000 41 ce6_ct_phastv6officialfilt2_chrX.263 1.0000 62
ce6_ct_phastv6officialfilt2_chrX.394 1.0000 57 ce6_ct_phastv6officialfilt2_chrX.487 1.0000 35
ce6_ct_phastv6officialfilt2_chrX.503 1.0000 25 ce6_ct_phastv6officialfilt2_chrX.882 1.0000 38
ce6_ct_phastv6officialfilt2_chrX.887 1.0000 30 ce6_ct_phastv6officialfilt2_chrX.888 1.0000 25
ce6_ct_phastv6officialfilt2_chrX.889 1.0000 26 ce6_ct_phastv6officialfilt2_chrX.933 1.0000 37
ce6_ct_phastv6officialfilt2_chrX.1009 1.0000 38 ce6_ct_phastv6officialfilt2_chrX.1105 1.0000 39
ce6_ct_phastv6officialfilt2_chrX.1114 1.0000 30 ce6_ct_phastv6officialfilt2_chrX.1118 1.0000 62
ce6_ct_phastv6officialfilt2_chrX.1119 1.0000 28 ce6_ct_phastv6officialfilt2_chrX.1121 1.0000 24
ce6_ct_phastv6officialfilt2_chrX.1146 1.0000 21 ce6_ct_phastv6officialfilt2_chrX.1147 1.0000 32
ce6_ct_phastv6officialfilt2_chrX.1172 1.0000 24 ce6_ct_phastv6officialfilt2_chrX.1173 1.0000 21
ce6_ct_phastv6officialfilt2_chrX.1174 1.0000 49 ce6_ct_phastv6officialfilt2_chrX.1181 1.0000 29
ce6_ct_phastv6officialfilt2_chrX.1210 1.0000 47 ce6_ct_phastv6officialfilt2_chrX.1222 1.0000 29
ce6_ct_phastv6officialfilt2_chrX.1320 1.0000 41 ce6_ct_phastv6officialfilt2_chrX.1322 1.0000 71
ce6_ct_phastv6officialfilt2_chrX.1327 1.0000 146 ce6_ct_phastv6officialfilt2_chrX.1351 1.0000 28
ce6_ct_phastv6officialfilt2_chrX.1377 1.0000 23 ce6_ct_phastv6officialfilt2_chrX.1415 1.0000 49
ce6_ct_phastv6officialfilt2_chrX.1495 1.0000 28 ce6_ct_phastv6officialfilt2_chrX.1496 1.0000 24
ce6_ct_phastv6officialfilt2_chrX.1543 1.0000 40 ce6_ct_phastv6officialfilt2_chrX.1580 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.1584 1.0000 32 ce6_ct_phastv6officialfilt2_chrX.1685 1.0000 23
ce6_ct_phastv6officialfilt2_chrX.1759 1.0000 29 ce6_ct_phastv6officialfilt2_chrX.1761 1.0000 50
ce6_ct_phastv6officialfilt2_chrX.1787 1.0000 35 ce6_ct_phastv6officialfilt2_chrX.1823 1.0000 22
ce6_ct_phastv6officialfilt2_chrX.1824 1.0000 59 ce6_ct_phastv6officialfilt2_chrX.1847 1.0000 55
ce6_ct_phastv6officialfilt2_chrX.1884 1.0000 23 ce6_ct_phastv6officialfilt2_chrX.1885 1.0000 39
ce6_ct_phastv6officialfilt2_chrX.1893 1.0000 56 ce6_ct_phastv6officialfilt2_chrX.1907 1.0000 54
ce6_ct_phastv6officialfilt2_chrX.1912 1.0000 59 ce6_ct_phastv6officialfilt2_chrX.1913 1.0000 53
ce6_ct_phastv6officialfilt2_chrX.1965 1.0000 23 ce6_ct_phastv6officialfilt2_chrX.2010 1.0000 25
ce6_ct_phastv6officialfilt2_chrX.2011 1.0000 53 ce6_ct_phastv6officialfilt2_chrX.2028 1.0000 36
ce6_ct_phastv6officialfilt2_chrX.2029 1.0000 59 ce6_ct_phastv6officialfilt2_chrX.2030 1.0000 39
ce6_ct_phastv6officialfilt2_chrX.2065 1.0000 36 ce6_ct_phastv6officialfilt2_chrX.2139 1.0000 25
ce6_ct_phastv6officialfilt2_chrX.2160 1.0000 43 ce6_ct_phastv6officialfilt2_chrX.2161 1.0000 36
ce6_ct_phastv6officialfilt2_chrX.2207 1.0000 45 ce6_ct_phastv6officialfilt2_chrX.2262 1.0000 73
ce6_ct_phastv6officialfilt2_chrX.2265 1.0000 23 ce6_ct_phastv6officialfilt2_chrX.2266 1.0000 54
ce6_ct_phastv6officialfilt2_chrX.2363 1.0000 38 ce6_ct_phastv6officialfilt2_chrX.2406 1.0000 42
ce6_ct_phastv6officialfilt2_chrX.2439 1.0000 43 ce6_ct_phastv6officialfilt2_chrX.2473 1.0000 47
ce6_ct_phastv6officialfilt2_chrX.2588 1.0000 26 ce6_ct_phastv6officialfilt2_chrX.2601 1.0000 38
ce6_ct_phastv6officialfilt2_chrX.2602 1.0000 44 ce6_ct_phastv6officialfilt2_chrX.2603 1.0000 29
ce6_ct_phastv6officialfilt2_chrX.2620 1.0000 29 ce6_ct_phastv6officialfilt2_chrX.2627 1.0000 45
ce6_ct_phastv6officialfilt2_chrX.2664 1.0000 27 ce6_ct_phastv6officialfilt2_chrX.2782 1.0000 28
ce6_ct_phastv6officialfilt2_chrX.2784 1.0000 37 ce6_ct_phastv6officialfilt2_chrX.2789 1.0000 71
ce6_ct_phastv6officialfilt2_chrX.2839 1.0000 38 ce6_ct_phastv6officialfilt2_chrX.2851 1.0000 28
ce6_ct_phastv6officialfilt2_chrX.2874 1.0000 67 ce6_ct_phastv6officialfilt2_chrX.2905 1.0000 23
ce6_ct_phastv6officialfilt2_chrX.2907 1.0000 26 ce6_ct_phastv6officialfilt2_chrX.2910 1.0000 28
ce6_ct_phastv6officialfilt2_chrX.3073 1.0000 51 ce6_ct_phastv6officialfilt2_chrX.3088 1.0000 36
ce6_ct_phastv6officialfilt2_chrX.3122 1.0000 101 ce6_ct_phastv6officialfilt2_chrX.3130 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.3173 1.0000 29 ce6_ct_phastv6officialfilt2_chrX.3224 1.0000 35
ce6_ct_phastv6officialfilt2_chrX.3225 1.0000 30 ce6_ct_phastv6officialfilt2_chrX.3228 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.3229 1.0000 62 ce6_ct_phastv6officialfilt2_chrX.3230 1.0000 53
ce6_ct_phastv6officialfilt2_chrX.3232 1.0000 27 ce6_ct_phastv6officialfilt2_chrX.3233 1.0000 44
ce6_ct_phastv6officialfilt2_chrX.3245 1.0000 61 ce6_ct_phastv6officialfilt2_chrX.3246 1.0000 44
ce6_ct_phastv6officialfilt2_chrX.3250 1.0000 29 ce6_ct_phastv6officialfilt2_chrX.3252 1.0000 39
ce6_ct_phastv6officialfilt2_chrX.3253 1.0000 50 ce6_ct_phastv6officialfilt2_chrX.3254 1.0000 37
ce6_ct_phastv6officialfilt2_chrX.3255 1.0000 67 ce6_ct_phastv6officialfilt2_chrX.3265 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.3364 1.0000 26 ce6_ct_phastv6officialfilt2_chrX.3379 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.3407 1.0000 112 ce6_ct_phastv6officialfilt2_chrX.3408 1.0000 38
ce6_ct_phastv6officialfilt2_chrX.3409 1.0000 58 ce6_ct_phastv6officialfilt2_chrX.3410 1.0000 44
ce6_ct_phastv6officialfilt2_chrX.3412 1.0000 97 ce6_ct_phastv6officialfilt2_chrX.3414 1.0000 26
ce6_ct_phastv6officialfilt2_chrX.3439 1.0000 21 ce6_ct_phastv6officialfilt2_chrX.3440 1.0000 40
ce6_ct_phastv6officialfilt2_chrX.3452 1.0000 80 ce6_ct_phastv6officialfilt2_chrX.3470 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.3471 1.0000 70 ce6_ct_phastv6officialfilt2_chrX.3472 1.0000 31
ce6_ct_phastv6officialfilt2_chrX.3481 1.0000 49 ce6_ct_phastv6officialfilt2_chrX.3482 1.0000 63
ce6_ct_phastv6officialfilt2_chrX.3486 1.0000 31 ce6_ct_phastv6officialfilt2_chrX.3487 1.0000 36
ce6_ct_phastv6officialfilt2_chrX.3488 1.0000 32 ce6_ct_phastv6officialfilt2_chrX.3496 1.0000 24
ce6_ct_phastv6officialfilt2_chrX.3675 1.0000 38 ce6_ct_phastv6officialfilt2_chrX.3687 1.0000 47
ce6_ct_phastv6officialfilt2_chrX.3688 1.0000 58 ce6_ct_phastv6officialfilt2_chrX.3689 1.0000 36
ce6_ct_phastv6officialfilt2_chrX.3702 1.0000 39 ce6_ct_phastv6officialfilt2_chrX.3745 1.0000 64
ce6_ct_phastv6officialfilt2_chrX.3746 1.0000 25 ce6_ct_phastv6officialfilt2_chrX.3765 1.0000 83
ce6_ct_phastv6officialfilt2_chrX.3766 1.0000 33 ce6_ct_phastv6officialfilt2_chrX.3838 1.0000 36
ce6_ct_phastv6officialfilt2_chrX.3872 1.0000 63 ce6_ct_phastv6officialfilt2_chrX.3874 1.0000 45
ce6_ct_phastv6officialfilt2_chrX.3875 1.0000 32 ce6_ct_phastv6officialfilt2_chrX.3876 1.0000 25
ce6_ct_phastv6officialfilt2_chrX.3906 1.0000 77 ce6_ct_phastv6officialfilt2_chrX.4038 1.0000 119
ce6_ct_phastv6officialfilt2_chrX.4046 1.0000 62 ce6_ct_phastv6officialfilt2_chrX.4049 1.0000 38
ce6_ct_phastv6officialfilt2_chrX.4074 1.0000 40 ce6_ct_phastv6officialfilt2_chrX.4130 1.0000 34
ce6_ct_phastv6officialfilt2_chrX.4155 1.0000 130 ce6_ct_phastv6officialfilt2_chrX.4185 1.0000 43
ce6_ct_phastv6officialfilt2_chrX.4205 1.0000 61 ce6_ct_phastv6officialfilt2_chrX.4206 1.0000 39
ce6_ct_phastv6officialfilt2_chrX.4214 1.0000 24 ce6_ct_phastv6officialfilt2_chrX.4251 1.0000 39
ce6_ct_phastv6officialfilt2_chrX.4291 1.0000 20 ce6_ct_phastv6officialfilt2_chrX.4292 1.0000 70
ce6_ct_phastv6officialfilt2_chrX.4328 1.0000 26 ce6_ct_phastv6officialfilt2_chrX.4332 1.0000 54
ce6_ct_phastv6officialfilt2_chrX.4422 1.0000 42 ce6_ct_phastv6officialfilt2_chrX.4470 1.0000 34
ce6_ct_phastv6officialfilt2_chrX.4471 1.0000 54 ce6_ct_phastv6officialfilt2_chrX.4472 1.0000 27
ce6_ct_phastv6officialfilt2_chrX.4473 1.0000 45 ce6_ct_phastv6officialfilt2_chrX.4500 1.0000 52
ce6_ct_phastv6officialfilt2_chrX.4531 1.0000 30 ce6_ct_phastv6officialfilt2_chrX.4532 1.0000 27
ce6_ct_phastv6officialfilt2_chrX.4533 1.0000 34 ce6_ct_phastv6officialfilt2_chrX.4566 1.0000 57
ce6_ct_phastv6officialfilt2_chrX.4568 1.0000 106 ce6_ct_phastv6officialfilt2_chrX.4587 1.0000 40
ce6_ct_phastv6officialfilt2_chrX.4588 1.0000 62 ce6_ct_phastv6officialfilt2_chrX.4717 1.0000 32
ce6_ct_phastv6officialfilt2_chrX.4805 1.0000 44 ce6_ct_phastv6officialfilt2_chrX.4844 1.0000 26
ce6_ct_phastv6officialfilt2_chrX.4845 1.0000 33 ce6_ct_phastv6officialfilt2_chrX.5016 1.0000 25
ce6_ct_phastv6officialfilt2_chrX.5021 1.0000 38 ce6_ct_phastv6officialfilt2_chrX.5022 1.0000 53
ce6_ct_phastv6officialfilt2_chrX.5091 1.0000 27 ce6_ct_phastv6officialfilt2_chrX.5095 1.0000 169
ce6_ct_phastv6officialfilt2_chrX.5116 1.0000 46 ce6_ct_phastv6officialfilt2_chrX.5232 1.0000 22
ce6_ct_phastv6officialfilt2_chrX.5233 1.0000 62 ce6_ct_phastv6officialfilt2_chrX.5270 1.0000 55
ce6_ct_phastv6officialfilt2_chrX.5283 1.0000 98 ce6_ct_phastv6officialfilt2_chrX.5285 1.0000 30
ce6_ct_phastv6officialfilt2_chrX.5335 1.0000 34 ce6_ct_phastv6officialfilt2_chrX.5364 1.0000 30
ce6_ct_phastv6officialfilt2_chrX.5365 1.0000 89 ce6_ct_phastv6officialfilt2_chrX.5366 1.0000 50
ce6_ct_phastv6officialfilt2_chrX.5408 1.0000 52 ce6_ct_phastv6officialfilt2_chrX.5409 1.0000 68
ce6_ct_phastv6officialfilt2_chrX.5434 1.0000 36 ce6_ct_phastv6officialfilt2_chrX.5444 1.0000 46
ce6_ct_phastv6officialfilt2_chrX.5445 1.0000 81 ce6_ct_phastv6officialfilt2_chrX.5493 1.0000 88
ce6_ct_phastv6officialfilt2_chrX.5513 1.0000 29 ce6_ct_phastv6officialfilt2_chrX.5517 1.0000 123
ce6_ct_phastv6officialfilt2_chrX.5518 1.0000 76 ce6_ct_phastv6officialfilt2_chrX.5519 1.0000 37
ce6_ct_phastv6officialfilt2_chrX.5520 1.0000 23 ce6_ct_phastv6officialfilt2_chrX.5521 1.0000 41
ce6_ct_phastv6officialfilt2_chrX.5522 1.0000 74 ce6_ct_phastv6officialfilt2_chrX.5523 1.0000 19
ce6_ct_phastv6officialfilt2_chrX.5524 1.0000 63 ce6_ct_phastv6officialfilt2_chrX.5526 1.0000 27
ce6_ct_phastv6officialfilt2_chrX.5544 1.0000 68 ce6_ct_phastv6officialfilt2_chrX.5568 1.0000 75
ce6_ct_phastv6officialfilt2_chrX.5577 1.0000 56 ce6_ct_phastv6officialfilt2_chrX.5592 1.0000 107
ce6_ct_phastv6officialfilt2_chrX.5605 1.0000 34 ce6_ct_phastv6officialfilt2_chrX.5612 1.0000 170
ce6_ct_phastv6officialfilt2_chrX.5712 1.0000 28 ce6_ct_phastv6officialfilt2_chrX.5750 1.0000 24
ce6_ct_phastv6officialfilt2_chrX.5772 1.0000 29 ce6_ct_phastv6officialfilt2_chrX.5791 1.0000 41
ce6_ct_phastv6officialfilt2_chrX.5792 1.0000 87 ce6_ct_phastv6officialfilt2_chrX.5793 1.0000 44
ce6_ct_phastv6officialfilt2_chrX.5829 1.0000 40 ce6_ct_phastv6officialfilt2_chrX.5830 1.0000 35
ce6_ct_phastv6officialfilt2_chrX.5839 1.0000 38 ce6_ct_phastv6officialfilt2_chrX.5845 1.0000 61
ce6_ct_phastv6officialfilt2_chrX.5890 1.0000 49 ce6_ct_phastv6officialfilt2_chrX.5925 1.0000 30
ce6_ct_phastv6officialfilt2_chrX.5947 1.0000 117 ce6_ct_phastv6officialfilt2_chrX.5993 1.0000 30
ce6_ct_phastv6officialfilt2_chrX.6018 1.0000 111 ce6_ct_phastv6officialfilt2_chrX.6019 1.0000 29
ce6_ct_phastv6officialfilt2_chrX.6026 1.0000 52 ce6_ct_phastv6officialfilt2_chrX.6134 1.0000 39
ce6_ct_phastv6officialfilt2_chrX.6183 1.0000 52 ce6_ct_phastv6officialfilt2_chrX.6184 1.0000 77
ce6_ct_phastv6officialfilt2_chrX.6185 1.0000 52 ce6_ct_phastv6officialfilt2_chrX.6186 1.0000 27
ce6_ct_phastv6officialfilt2_chrX.6282 1.0000 22 ce6_ct_phastv6officialfilt2_chrX.6283 1.0000 35
ce6_ct_phastv6officialfilt2_chrX.6294 1.0000 47 ce6_ct_phastv6officialfilt2_chrX.6387 1.0000 42
ce6_ct_phastv6officialfilt2_chrX.6492 1.0000 36 ce6_ct_phastv6officialfilt2_chrX.6511 1.0000 53
ce6_ct_phastv6officialfilt2_chrX.6512 1.0000 41 ce6_ct_phastv6officialfilt2_chrX.6612 1.0000 25
ce6_ct_phastv6officialfilt2_chrX.6741 1.0000 70 ce6_ct_phastv6officialfilt2_chrX.6772 1.0000 79
ce6_ct_phastv6officialfilt2_chrX.6773 1.0000 27 ce6_ct_phastv6officialfilt2_chrX.6774 1.0000 64
ce6_ct_phastv6officialfilt2_chrX.6775 1.0000 33 ce6_ct_phastv6officialfilt2_chrX.6782 1.0000 24
ce6_ct_phastv6officialfilt2_chrX.6783 1.0000 23 ce6_ct_phastv6officialfilt2_chrX.6784 1.0000 38
ce6_ct_phastv6officialfilt2_chrX.6789 1.0000 68 ce6_ct_phastv6officialfilt2_chrX.6796 1.0000 27
ce6_ct_phastv6officialfilt2_chrX.6823 1.0000 49 ce6_ct_phastv6officialfilt2_chrX.6836 1.0000 30
ce6_ct_phastv6officialfilt2_chrX.6847 1.0000 76 ce6_ct_phastv6officialfilt2_chrX.6861 1.0000 79
ce6_ct_phastv6officialfilt2_chrX.6862 1.0000 46 ce6_ct_phastv6officialfilt2_chrX.6866 1.0000 46
ce6_ct_phastv6officialfilt2_chrX.6922 1.0000 28 ce6_ct_phastv6officialfilt2_chrX.6943 1.0000 43
ce6_ct_phastv6officialfilt2_chrX.6972 1.0000 46 ce6_ct_phastv6officialfilt2_chrX.7045 1.0000 99
ce6_ct_phastv6officialfilt2_chrX.7085 1.0000 55 ce6_ct_phastv6officialfilt2_chrX.7087 1.0000 39
ce6_ct_phastv6officialfilt2_chrX.7120 1.0000 25 ce6_ct_phastv6officialfilt2_chrX.7121 1.0000 31
ce6_ct_phastv6officialfilt2_chrX.7126 1.0000 45 ce6_ct_phastv6officialfilt2_chrX.7192 1.0000 23
ce6_ct_phastv6officialfilt2_chrX.7291 1.0000 31 ce6_ct_phastv6officialfilt2_chrX.7341 1.0000 130
ce6_ct_phastv6officialfilt2_chrX.7342 1.0000 67 ce6_ct_phastv6officialfilt2_chrX.7448 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.7467 1.0000 36 ce6_ct_phastv6officialfilt2_chrX.7469 1.0000 25
ce6_ct_phastv6officialfilt2_chrX.7485 1.0000 76 ce6_ct_phastv6officialfilt2_chrX.7486 1.0000 136
ce6_ct_phastv6officialfilt2_chrX.7496 1.0000 39 ce6_ct_phastv6officialfilt2_chrX.7565 1.0000 65
ce6_ct_phastv6officialfilt2_chrX.7566 1.0000 36 ce6_ct_phastv6officialfilt2_chrX.7585 1.0000 44
ce6_ct_phastv6officialfilt2_chrX.7586 1.0000 65 ce6_ct_phastv6officialfilt2_chrX.7593 1.0000 67
ce6_ct_phastv6officialfilt2_chrX.7630 1.0000 42 ce6_ct_phastv6officialfilt2_chrX.7633 1.0000 88
ce6_ct_phastv6officialfilt2_chrX.7634 1.0000 43 ce6_ct_phastv6officialfilt2_chrX.7642 1.0000 115
ce6_ct_phastv6officialfilt2_chrX.7657 1.0000 36 ce6_ct_phastv6officialfilt2_chrX.7745 1.0000 61
ce6_ct_phastv6officialfilt2_chrX.7755 1.0000 78 ce6_ct_phastv6officialfilt2_chrX.7781 1.0000 93
ce6_ct_phastv6officialfilt2_chrX.7827 1.0000 30 ce6_ct_phastv6officialfilt2_chrX.7828 1.0000 21
ce6_ct_phastv6officialfilt2_chrX.7842 1.0000 67 ce6_ct_phastv6officialfilt2_chrX.7935 1.0000 111
ce6_ct_phastv6officialfilt2_chrX.7940 1.0000 34 ce6_ct_phastv6officialfilt2_chrX.7948 1.0000 37
ce6_ct_phastv6officialfilt2_chrX.7989 1.0000 56 ce6_ct_phastv6officialfilt2_chrX.8039 1.0000 62
ce6_ct_phastv6officialfilt2_chrX.8108 1.0000 38 ce6_ct_phastv6officialfilt2_chrX.8118 1.0000 20
ce6_ct_phastv6officialfilt2_chrX.8189 1.0000 23 ce6_ct_phastv6officialfilt2_chrX.8207 1.0000 31
ce6_ct_phastv6officialfilt2_chrX.8230 1.0000 46 ce6_ct_phastv6officialfilt2_chrX.8307 1.0000 27
ce6_ct_phastv6officialfilt2_chrX.8352 1.0000 32 ce6_ct_phastv6officialfilt2_chrX.8368 1.0000 20
ce6_ct_phastv6officialfilt2_chrX.8441 1.0000 165 ce6_ct_phastv6officialfilt2_chrX.8455 1.0000 37
ce6_ct_phastv6officialfilt2_chrX.8551 1.0000 43 ce6_ct_phastv6officialfilt2_chrX.8555 1.0000 34
ce6_ct_phastv6officialfilt2_chrX.8556 1.0000 57 ce6_ct_phastv6officialfilt2_chrX.8577 1.0000 63
ce6_ct_phastv6officialfilt2_chrX.8595 1.0000 37 ce6_ct_phastv6officialfilt2_chrX.8629 1.0000 53
ce6_ct_phastv6officialfilt2_chrX.8630 1.0000 47 ce6_ct_phastv6officialfilt2_chrX.8649 1.0000 31
ce6_ct_phastv6officialfilt2_chrX.8739 1.0000 32 ce6_ct_phastv6officialfilt2_chrX.8928 1.0000 35
ce6_ct_phastv6officialfilt2_chrX.8929 1.0000 51 ce6_ct_phastv6officialfilt2_chrX.8959 1.0000 51
ce6_ct_phastv6officialfilt2_chrX.9110 1.0000 54 ce6_ct_phastv6officialfilt2_chrX.9117 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.9142 1.0000 21 ce6_ct_phastv6officialfilt2_chrX.9228 1.0000 29
ce6_ct_phastv6officialfilt2_chrX.9333 1.0000 29 ce6_ct_phastv6officialfilt2_chrX.9351 1.0000 35
ce6_ct_phastv6officialfilt2_chrX.9460 1.0000 25 ce6_ct_phastv6officialfilt2_chrX.9465 1.0000 31
ce6_ct_phastv6officialfilt2_chrX.9507 1.0000 28 ce6_ct_phastv6officialfilt2_chrX.9541 1.0000 54
ce6_ct_phastv6officialfilt2_chrX.9550 1.0000 21 ce6_ct_phastv6officialfilt2_chrX.9604 1.0000 91
ce6_ct_phastv6officialfilt2_chrX.9605 1.0000 69 ce6_ct_phastv6officialfilt2_chrX.9609 1.0000 28
ce6_ct_phastv6officialfilt2_chrX.9610 1.0000 36 ce6_ct_phastv6officialfilt2_chrX.9611 1.0000 69
ce6_ct_phastv6officialfilt2_chrX.9640 1.0000 34 ce6_ct_phastv6officialfilt2_chrX.9641 1.0000 72
ce6_ct_phastv6officialfilt2_chrX.9720 1.0000 29 ce6_ct_phastv6officialfilt2_chrX.9814 1.0000 57
ce6_ct_phastv6officialfilt2_chrX.9837 1.0000 37 ce6_ct_phastv6officialfilt2_chrX.9913 1.0000 102
ce6_ct_phastv6officialfilt2_chrX.9941 1.0000 33 ce6_ct_phastv6officialfilt2_chrX.9955 1.0000 68
ce6_ct_phastv6officialfilt2_chrX.9956 1.0000 35 ce6_ct_phastv6officialfilt2_chrX.10000 1.0000 68
ce6_ct_phastv6officialfilt2_chrX.10084 1.0000 38 ce6_ct_phastv6officialfilt2_chrX.10111 1.0000 31
ce6_ct_phastv6officialfilt2_chrX.10264 1.0000 54 ce6_ct_phastv6officialfilt2_chrX.10265 1.0000 25
ce6_ct_phastv6officialfilt2_chrX.10285 1.0000 24 ce6_ct_phastv6officialfilt2_chrX.10364 1.0000 54
ce6_ct_phastv6officialfilt2_chrX.10365 1.0000 53 ce6_ct_phastv6officialfilt2_chrX.10394 1.0000 43
ce6_ct_phastv6officialfilt2_chrX.10396 1.0000 60 ce6_ct_phastv6officialfilt2_chrX.10400 1.0000 52
ce6_ct_phastv6officialfilt2_chrX.10401 1.0000 70 ce6_ct_phastv6officialfilt2_chrX.10411 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.10527 1.0000 68 ce6_ct_phastv6officialfilt2_chrX.10553 1.0000 57
ce6_ct_phastv6officialfilt2_chrX.10554 1.0000 57 ce6_ct_phastv6officialfilt2_chrX.10555 1.0000 37
ce6_ct_phastv6officialfilt2_chrX.10557 1.0000 53 ce6_ct_phastv6officialfilt2_chrX.10559 1.0000 46
ce6_ct_phastv6officialfilt2_chrX.10708 1.0000 48 ce6_ct_phastv6officialfilt2_chrX.10751 1.0000 67
ce6_ct_phastv6officialfilt2_chrX.10789 1.0000 55 ce6_ct_phastv6officialfilt2_chrX.10804 1.0000 47
ce6_ct_phastv6officialfilt2_chrX.10805 1.0000 68 ce6_ct_phastv6officialfilt2_chrX.10855 1.0000 60
ce6_ct_phastv6officialfilt2_chrX.10887 1.0000 42 ce6_ct_phastv6officialfilt2_chrX.10888 1.0000 111
ce6_ct_phastv6officialfilt2_chrX.10978 1.0000 82 ce6_ct_phastv6officialfilt2_chrX.11001 1.0000 48
ce6_ct_phastv6officialfilt2_chrX.11002 1.0000 35 ce6_ct_phastv6officialfilt2_chrX.11048 1.0000 28
ce6_ct_phastv6officialfilt2_chrX.11129 1.0000 59 ce6_ct_phastv6officialfilt2_chrX.11130 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.11132 1.0000 100 ce6_ct_phastv6officialfilt2_chrX.11152 1.0000 32
ce6_ct_phastv6officialfilt2_chrX.11154 1.0000 28 ce6_ct_phastv6officialfilt2_chrX.11173 1.0000 60
ce6_ct_phastv6officialfilt2_chrX.11232 1.0000 56 ce6_ct_phastv6officialfilt2_chrX.11233 1.0000 43
ce6_ct_phastv6officialfilt2_chrX.11342 1.0000 35 ce6_ct_phastv6officialfilt2_chrX.11417 1.0000 32
ce6_ct_phastv6officialfilt2_chrX.11537 1.0000 47 ce6_ct_phastv6officialfilt2_chrX.11570 1.0000 18
ce6_ct_phastv6officialfilt2_chrX.11576 1.0000 60 ce6_ct_phastv6officialfilt2_chrX.11577 1.0000 45
ce6_ct_phastv6officialfilt2_chrX.11579 1.0000 47 ce6_ct_phastv6officialfilt2_chrX.11581 1.0000 61
ce6_ct_phastv6officialfilt2_chrX.11821 1.0000 63 ce6_ct_phastv6officialfilt2_chrX.11822 1.0000 44
ce6_ct_phastv6officialfilt2_chrX.11826 1.0000 50 ce6_ct_phastv6officialfilt2_chrX.11827 1.0000 61
ce6_ct_phastv6officialfilt2_chrX.11897 1.0000 65 ce6_ct_phastv6officialfilt2_chrX.11912 1.0000 36
ce6_ct_phastv6officialfilt2_chrX.11979 1.0000 32 ce6_ct_phastv6officialfilt2_chrX.12082 1.0000 44
ce6_ct_phastv6officialfilt2_chrX.12083 1.0000 30 ce6_ct_phastv6officialfilt2_chrX.12084 1.0000 35
ce6_ct_phastv6officialfilt2_chrX.12085 1.0000 41 ce6_ct_phastv6officialfilt2_chrX.12095 1.0000 109
ce6_ct_phastv6officialfilt2_chrX.12156 1.0000 64 ce6_ct_phastv6officialfilt2_chrX.12263 1.0000 30
ce6_ct_phastv6officialfilt2_chrX.12291 1.0000 35 ce6_ct_phastv6officialfilt2_chrX.12293 1.0000 38
ce6_ct_phastv6officialfilt2_chrX.12296 1.0000 102 ce6_ct_phastv6officialfilt2_chrX.12349 1.0000 24
ce6_ct_phastv6officialfilt2_chrX.12390 1.0000 24 ce6_ct_phastv6officialfilt2_chrX.12406 1.0000 49
ce6_ct_phastv6officialfilt2_chrX.12446 1.0000 49 ce6_ct_phastv6officialfilt2_chrX.12447 1.0000 74
ce6_ct_phastv6officialfilt2_chrX.12497 1.0000 39 ce6_ct_phastv6officialfilt2_chrX.12575 1.0000 55
ce6_ct_phastv6officialfilt2_chrX.12576 1.0000 78 ce6_ct_phastv6officialfilt2_chrX.12580 1.0000 87
ce6_ct_phastv6officialfilt2_chrX.12610 1.0000 23 ce6_ct_phastv6officialfilt2_chrX.12739 1.0000 68
ce6_ct_phastv6officialfilt2_chrX.12744 1.0000 30 ce6_ct_phastv6officialfilt2_chrX.12745 1.0000 42
ce6_ct_phastv6officialfilt2_chrX.12746 1.0000 90 ce6_ct_phastv6officialfilt2_chrX.12747 1.0000 67
ce6_ct_phastv6officialfilt2_chrX.12751 1.0000 62 ce6_ct_phastv6officialfilt2_chrX.12753 1.0000 80
ce6_ct_phastv6officialfilt2_chrX.12758 1.0000 36 ce6_ct_phastv6officialfilt2_chrX.12790 1.0000 35
ce6_ct_phastv6officialfilt2_chrX.12796 1.0000 30 ce6_ct_phastv6officialfilt2_chrX.12809 1.0000 34
ce6_ct_phastv6officialfilt2_chrX.12833 1.0000 19 ce6_ct_phastv6officialfilt2_chrX.12844 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.12845 1.0000 38 ce6_ct_phastv6officialfilt2_chrX.12869 1.0000 31
ce6_ct_phastv6officialfilt2_chrX.12951 1.0000 46 ce6_ct_phastv6officialfilt2_chrX.12959 1.0000 28
ce6_ct_phastv6officialfilt2_chrX.13078 1.0000 95 ce6_ct_phastv6officialfilt2_chrX.13098 1.0000 73
ce6_ct_phastv6officialfilt2_chrX.13125 1.0000 29 ce6_ct_phastv6officialfilt2_chrX.13165 1.0000 62
ce6_ct_phastv6officialfilt2_chrX.13260 1.0000 66 ce6_ct_phastv6officialfilt2_chrX.13286 1.0000 43
ce6_ct_phastv6officialfilt2_chrX.13321 1.0000 24 ce6_ct_phastv6officialfilt2_chrX.13323 1.0000 58
ce6_ct_phastv6officialfilt2_chrX.13324 1.0000 21 ce6_ct_phastv6officialfilt2_chrX.13349 1.0000 29
ce6_ct_phastv6officialfilt2_chrX.13369 1.0000 87 ce6_ct_phastv6officialfilt2_chrX.13374 1.0000 40
ce6_ct_phastv6officialfilt2_chrX.13380 1.0000 44 ce6_ct_phastv6officialfilt2_chrX.13445 1.0000 50
ce6_ct_phastv6officialfilt2_chrX.13446 1.0000 66 ce6_ct_phastv6officialfilt2_chrX.13461 1.0000 42
ce6_ct_phastv6officialfilt2_chrX.13554 1.0000 43 ce6_ct_phastv6officialfilt2_chrX.13559 1.0000 47
ce6_ct_phastv6officialfilt2_chrX.13567 1.0000 23 ce6_ct_phastv6officialfilt2_chrX.13568 1.0000 27
ce6_ct_phastv6officialfilt2_chrX.13650 1.0000 34 ce6_ct_phastv6officialfilt2_chrX.13651 1.0000 56
ce6_ct_phastv6officialfilt2_chrX.13656 1.0000 64 ce6_ct_phastv6officialfilt2_chrX.13670 1.0000 32
ce6_ct_phastv6officialfilt2_chrX.13698 1.0000 31 ce6_ct_phastv6officialfilt2_chrX.13729 1.0000 128
ce6_ct_phastv6officialfilt2_chrX.13738 1.0000 48 ce6_ct_phastv6officialfilt2_chrX.13767 1.0000 23
ce6_ct_phastv6officialfilt2_chrX.13878 1.0000 86 ce6_ct_phastv6officialfilt2_chrX.13904 1.0000 56
ce6_ct_phastv6officialfilt2_chrX.13905 1.0000 44 ce6_ct_phastv6officialfilt2_chrX.13981 1.0000 66
ce6_ct_phastv6officialfilt2_chrX.14042 1.0000 24 ce6_ct_phastv6officialfilt2_chrX.14118 1.0000 54
ce6_ct_phastv6officialfilt2_chrX.14126 1.0000 50 ce6_ct_phastv6officialfilt2_chrX.14240 1.0000 47
ce6_ct_phastv6officialfilt2_chrX.14249 1.0000 23 ce6_ct_phastv6officialfilt2_chrX.14354 1.0000 56
ce6_ct_phastv6officialfilt2_chrX.14404 1.0000 46 ce6_ct_phastv6officialfilt2_chrX.14500 1.0000 100
ce6_ct_phastv6officialfilt2_chrX.14501 1.0000 40 ce6_ct_phastv6officialfilt2_chrX.14502 1.0000 47
ce6_ct_phastv6officialfilt2_chrX.14503 1.0000 36 ce6_ct_phastv6officialfilt2_chrX.14504 1.0000 50
ce6_ct_phastv6officialfilt2_chrX.14508 1.0000 73 ce6_ct_phastv6officialfilt2_chrX.14509 1.0000 45
ce6_ct_phastv6officialfilt2_chrX.14656 1.0000 62 ce6_ct_phastv6officialfilt2_chrX.14659 1.0000 68
ce6_ct_phastv6officialfilt2_chrX.14669 1.0000 63 ce6_ct_phastv6officialfilt2_chrX.14675 1.0000 72
ce6_ct_phastv6officialfilt2_chrX.14677 1.0000 64 ce6_ct_phastv6officialfilt2_chrX.14680 1.0000 33
ce6_ct_phastv6officialfilt2_chrX.14682 1.0000 31 ce6_ct_phastv6officialfilt2_chrX.14738 1.0000 36
ce6_ct_phastv6officialfilt2_chrX.14811 1.0000 72 ce6_ct_phastv6officialfilt2_chrX.14882 1.0000 81
ce6_ct_phastv6officialfilt2_chrX.14970 1.0000 36 ce6_ct_phastv6officialfilt2_chrX.14988 1.0000 41
ce6_ct_phastv6officialfilt2_chrX.14997 1.0000 38 ce6_ct_phastv6officialfilt2_chrX.14998 1.0000 58
ce6_ct_phastv6officialfilt2_chrX.15339 1.0000 39 ce6_ct_phastv6officialfilt2_chrX.15342 1.0000 28
ce6_ct_phastv6officialfilt2_chrX.15347 1.0000 32 ce6_ct_phastv6officialfilt2_chrX.15362 1.0000 67
ce6_ct_phastv6officialfilt2_chrX.15372 1.0000 33 ce6_ct_phastv6officialfilt2_chrX.15373 1.0000 38
ce6_ct_phastv6officialfilt2_chrX.15376 1.0000 24 ce6_ct_phastv6officialfilt2_chrX.15414 1.0000 29
ce6_ct_phastv6officialfilt2_chrX.15430 1.0000 40 ce6_ct_phastv6officialfilt2_chrX.15431 1.0000 63
ce6_ct_phastv6officialfilt2_chrX.15432 1.0000 78 ce6_ct_phastv6officialfilt2_chrX.15486 1.0000 46
ce6_ct_phastv6officialfilt2_chrX.15495 1.0000 51 ce6_ct_phastv6officialfilt2_chrX.15496 1.0000 45
ce6_ct_phastv6officialfilt2_chrX.15504 1.0000 42 ce6_ct_phastv6officialfilt2_chrX.15549 1.0000 28
ce6_ct_phastv6officialfilt2_chrX.15550 1.0000 51 ce6_ct_phastv6officialfilt2_chrX.15551 1.0000 26
ce6_ct_phastv6officialfilt2_chrX.15578 1.0000 64 ce6_ct_phastv6officialfilt2_chrX.15579 1.0000 47
ce6_ct_phastv6officialfilt2_chrX.15614 1.0000 34 ce6_ct_phastv6officialfilt2_chrX.15628 1.0000 39
ce6_ct_phastv6officialfilt2_chrX.15743 1.0000 52 ce6_ct_phastv6officialfilt2_chrX.15789 1.0000 54
ce6_ct_phastv6officialfilt2_chrX.15896 1.0000 86 ce6_ct_phastv6officialfilt2_chrX.15925 1.0000 42
ce6_ct_phastv6officialfilt2_chrX.15950 1.0000 61 ce6_ct_phastv6officialfilt2_chrX.15953 1.0000 42
ce6_ct_phastv6officialfilt2_chrX.15954 1.0000 28 ce6_ct_phastv6officialfilt2_chrX.15979 1.0000 35
ce6_ct_phastv6officialfilt2_chrX.16012 1.0000 41 ce6_ct_phastv6officialfilt2_chrX.16123 1.0000 52
ce6_ct_phastv6officialfilt2_chrX.16124 1.0000 48 ce6_ct_phastv6officialfilt2_chrX.16147 1.0000 38
ce6_ct_phastv6officialfilt2_chrX.16165 1.0000 40 ce6_ct_phastv6officialfilt2_chrX.16205 1.0000 28
ce6_ct_phastv6officialfilt2_chrII.43 1.0000 53 ce6_ct_phastv6officialfilt2_chrII.44 1.0000 54
ce6_ct_phastv6officialfilt2_chrII.60 1.0000 24 ce6_ct_phastv6officialfilt2_chrII.69 1.0000 31
ce6_ct_phastv6officialfilt2_chrII.84 1.0000 25 ce6_ct_phastv6officialfilt2_chrII.171 1.0000 22
ce6_ct_phastv6officialfilt2_chrII.257 1.0000 44 ce6_ct_phastv6officialfilt2_chrII.262 1.0000 22
ce6_ct_phastv6officialfilt2_chrII.405 1.0000 49 ce6_ct_phastv6officialfilt2_chrII.436 1.0000 51
ce6_ct_phastv6officialfilt2_chrII.551 1.0000 37 ce6_ct_phastv6officialfilt2_chrII.609 1.0000 41
ce6_ct_phastv6officialfilt2_chrII.620 1.0000 59 ce6_ct_phastv6officialfilt2_chrII.625 1.0000 29
ce6_ct_phastv6officialfilt2_chrII.629 1.0000 32 ce6_ct_phastv6officialfilt2_chrII.647 1.0000 30
ce6_ct_phastv6officialfilt2_chrII.732 1.0000 36 ce6_ct_phastv6officialfilt2_chrII.737 1.0000 32
ce6_ct_phastv6officialfilt2_chrII.751 1.0000 35 ce6_ct_phastv6officialfilt2_chrII.766 1.0000 39
ce6_ct_phastv6officialfilt2_chrII.789 1.0000 28 ce6_ct_phastv6officialfilt2_chrII.790 1.0000 28
ce6_ct_phastv6officialfilt2_chrII.799 1.0000 59 ce6_ct_phastv6officialfilt2_chrII.852 1.0000 26
ce6_ct_phastv6officialfilt2_chrII.853 1.0000 30 ce6_ct_phastv6officialfilt2_chrII.869 1.0000 25
ce6_ct_phastv6officialfilt2_chrII.892 1.0000 35 ce6_ct_phastv6officialfilt2_chrII.893 1.0000 34
ce6_ct_phastv6officialfilt2_chrII.900 1.0000 31 ce6_ct_phastv6officialfilt2_chrII.944 1.0000 20
ce6_ct_phastv6officialfilt2_chrII.952 1.0000 29 ce6_ct_phastv6officialfilt2_chrII.974 1.0000 33
ce6_ct_phastv6officialfilt2_chrII.975 1.0000 30 ce6_ct_phastv6officialfilt2_chrII.979 1.0000 55
ce6_ct_phastv6officialfilt2_chrII.980 1.0000 30 ce6_ct_phastv6officialfilt2_chrII.987 1.0000 35
ce6_ct_phastv6officialfilt2_chrII.1011 1.0000 23 ce6_ct_phastv6officialfilt2_chrII.1016 1.0000 22
ce6_ct_phastv6officialfilt2_chrII.1020 1.0000 23 ce6_ct_phastv6officialfilt2_chrII.1046 1.0000 24
ce6_ct_phastv6officialfilt2_chrII.1085 1.0000 25 ce6_ct_phastv6officialfilt2_chrII.1092 1.0000 26
ce6_ct_phastv6officialfilt2_chrII.1112 1.0000 25 ce6_ct_phastv6officialfilt2_chrII.1117 1.0000 30
ce6_ct_phastv6officialfilt2_chrII.1132 1.0000 47 ce6_ct_phastv6officialfilt2_chrII.1134 1.0000 33
ce6_ct_phastv6officialfilt2_chrII.1199 1.0000 29 ce6_ct_phastv6officialfilt2_chrII.1226 1.0000 37
ce6_ct_phastv6officialfilt2_chrII.1255 1.0000 41 ce6_ct_phastv6officialfilt2_chrII.1279 1.0000 21
ce6_ct_phastv6officialfilt2_chrII.1288 1.0000 34 ce6_ct_phastv6officialfilt2_chrII.1292 1.0000 84
ce6_ct_phastv6officialfilt2_chrII.1305 1.0000 25 ce6_ct_phastv6officialfilt2_chrII.1318 1.0000 28
ce6_ct_phastv6officialfilt2_chrII.1344 1.0000 21 ce6_ct_phastv6officialfilt2_chrII.1360 1.0000 39
ce6_ct_phastv6officialfilt2_chrII.1361 1.0000 42 ce6_ct_phastv6officialfilt2_chrII.1405 1.0000 24
ce6_ct_phastv6officialfilt2_chrII.1414 1.0000 27 ce6_ct_phastv6officialfilt2_chrII.1468 1.0000 37
ce6_ct_phastv6officialfilt2_chrII.1489 1.0000 31 ce6_ct_phastv6officialfilt2_chrII.1502 1.0000 28
ce6_ct_phastv6officialfilt2_chrII.1503 1.0000 44 ce6_ct_phastv6officialfilt2_chrII.1506 1.0000 32
ce6_ct_phastv6officialfilt2_chrII.1529 1.0000 45 ce6_ct_phastv6officialfilt2_chrII.1551 1.0000 25
ce6_ct_phastv6officialfilt2_chrII.1552 1.0000 47 ce6_ct_phastv6officialfilt2_chrII.1598 1.0000 25
ce6_ct_phastv6officialfilt2_chrII.1619 1.0000 46 ce6_ct_phastv6officialfilt2_chrII.1621 1.0000 58
ce6_ct_phastv6officialfilt2_chrII.1622 1.0000 43 ce6_ct_phastv6officialfilt2_chrII.1625 1.0000 37
ce6_ct_phastv6officialfilt2_chrII.1653 1.0000 29 ce6_ct_phastv6officialfilt2_chrII.1689 1.0000 46
ce6_ct_phastv6officialfilt2_chrII.1691 1.0000 31 ce6_ct_phastv6officialfilt2_chrII.1694 1.0000 52
ce6_ct_phastv6officialfilt2_chrII.1698 1.0000 26 ce6_ct_phastv6officialfilt2_chrII.1699 1.0000 22
ce6_ct_phastv6officialfilt2_chrII.1726 1.0000 26 ce6_ct_phastv6officialfilt2_chrII.1789 1.0000 34
ce6_ct_phastv6officialfilt2_chrII.1795 1.0000 22 ce6_ct_phastv6officialfilt2_chrII.1856 1.0000 37
ce6_ct_phastv6officialfilt2_chrII.1888 1.0000 46 ce6_ct_phastv6officialfilt2_chrII.1908 1.0000 30
ce6_ct_phastv6officialfilt2_chrII.1912 1.0000 47 ce6_ct_phastv6officialfilt2_chrII.1914 1.0000 38
ce6_ct_phastv6officialfilt2_chrII.1917 1.0000 23 ce6_ct_phastv6officialfilt2_chrII.2003 1.0000 21
ce6_ct_phastv6officialfilt2_chrII.2029 1.0000 39 ce6_ct_phastv6officialfilt2_chrII.2094 1.0000 47
ce6_ct_phastv6officialfilt2_chrII.2173 1.0000 38 ce6_ct_phastv6officialfilt2_chrII.2246 1.0000 72
ce6_ct_phastv6officialfilt2_chrII.2287 1.0000 28 ce6_ct_phastv6officialfilt2_chrII.2358 1.0000 45
ce6_ct_phastv6officialfilt2_chrII.2421 1.0000 38 ce6_ct_phastv6officialfilt2_chrII.2541 1.0000 23
ce6_ct_phastv6officialfilt2_chrII.2570 1.0000 38 ce6_ct_phastv6officialfilt2_chrII.2814 1.0000 41
ce6_ct_phastv6officialfilt2_chrII.2862 1.0000 44 ce6_ct_phastv6officialfilt2_chrII.2885 1.0000 42
ce6_ct_phastv6officialfilt2_chrII.2919 1.0000 36 ce6_ct_phastv6officialfilt2_chrII.2955 1.0000 36
ce6_ct_phastv6officialfilt2_chrII.2987 1.0000 21 ce6_ct_phastv6officialfilt2_chrII.2988 1.0000 30
ce6_ct_phastv6officialfilt2_chrII.3034 1.0000 33 ce6_ct_phastv6officialfilt2_chrII.3039 1.0000 66
ce6_ct_phastv6officialfilt2_chrII.3056 1.0000 23 ce6_ct_phastv6officialfilt2_chrII.3126 1.0000 22
ce6_ct_phastv6officialfilt2_chrII.3128 1.0000 46 ce6_ct_phastv6officialfilt2_chrII.3152 1.0000 56
ce6_ct_phastv6officialfilt2_chrII.3174 1.0000 31 ce6_ct_phastv6officialfilt2_chrII.3196 1.0000 58
ce6_ct_phastv6officialfilt2_chrII.3202 1.0000 56 ce6_ct_phastv6officialfilt2_chrII.3282 1.0000 30
ce6_ct_phastv6officialfilt2_chrII.3286 1.0000 32 ce6_ct_phastv6officialfilt2_chrII.3368 1.0000 29
ce6_ct_phastv6officialfilt2_chrII.3421 1.0000 32 ce6_ct_phastv6officialfilt2_chrII.3524 1.0000 34
ce6_ct_phastv6officialfilt2_chrII.3578 1.0000 35 ce6_ct_phastv6officialfilt2_chrII.3601 1.0000 66
ce6_ct_phastv6officialfilt2_chrII.3649 1.0000 72 ce6_ct_phastv6officialfilt2_chrII.3716 1.0000 41
ce6_ct_phastv6officialfilt2_chrII.3792 1.0000 28 ce6_ct_phastv6officialfilt2_chrII.3947 1.0000 48
ce6_ct_phastv6officialfilt2_chrII.4016 1.0000 34 ce6_ct_phastv6officialfilt2_chrII.4017 1.0000 24
ce6_ct_phastv6officialfilt2_chrII.4024 1.0000 72 ce6_ct_phastv6officialfilt2_chrII.4055 1.0000 70
ce6_ct_phastv6officialfilt2_chrII.4195 1.0000 24 ce6_ct_phastv6officialfilt2_chrII.4211 1.0000 41
ce6_ct_phastv6officialfilt2_chrII.4212 1.0000 34 ce6_ct_phastv6officialfilt2_chrII.4304 1.0000 23
ce6_ct_phastv6officialfilt2_chrII.4307 1.0000 52 ce6_ct_phastv6officialfilt2_chrII.4322 1.0000 30
ce6_ct_phastv6officialfilt2_chrII.4417 1.0000 31 ce6_ct_phastv6officialfilt2_chrII.4431 1.0000 33
ce6_ct_phastv6officialfilt2_chrII.4515 1.0000 28 ce6_ct_phastv6officialfilt2_chrII.4791 1.0000 31
ce6_ct_phastv6officialfilt2_chrII.4800 1.0000 27 ce6_ct_phastv6officialfilt2_chrII.4809 1.0000 37
ce6_ct_phastv6officialfilt2_chrII.4811 1.0000 30 ce6_ct_phastv6officialfilt2_chrII.4819 1.0000 54
ce6_ct_phastv6officialfilt2_chrII.4851 1.0000 33 ce6_ct_phastv6officialfilt2_chrII.4891 1.0000 40
ce6_ct_phastv6officialfilt2_chrII.4896 1.0000 41 ce6_ct_phastv6officialfilt2_chrII.4967 1.0000 34
ce6_ct_phastv6officialfilt2_chrII.4994 1.0000 25 ce6_ct_phastv6officialfilt2_chrII.5048 1.0000 26
ce6_ct_phastv6officialfilt2_chrII.5125 1.0000 60 ce6_ct_phastv6officialfilt2_chrII.5239 1.0000 32
ce6_ct_phastv6officialfilt2_chrII.5297 1.0000 87 ce6_ct_phastv6officialfilt2_chrII.5316 1.0000 48
ce6_ct_phastv6officialfilt2_chrII.5333 1.0000 35 ce6_ct_phastv6officialfilt2_chrII.5368 1.0000 41
ce6_ct_phastv6officialfilt2_chrII.5471 1.0000 27 ce6_ct_phastv6officialfilt2_chrII.5474 1.0000 21
ce6_ct_phastv6officialfilt2_chrII.5523 1.0000 33 ce6_ct_phastv6officialfilt2_chrII.5650 1.0000 47
ce6_ct_phastv6officialfilt2_chrII.5730 1.0000 53 ce6_ct_phastv6officialfilt2_chrII.5740 1.0000 84
ce6_ct_phastv6officialfilt2_chrII.5754 1.0000 21 ce6_ct_phastv6officialfilt2_chrII.5777 1.0000 39
ce6_ct_phastv6officialfilt2_chrII.5795 1.0000 57 ce6_ct_phastv6officialfilt2_chrII.5828 1.0000 34
ce6_ct_phastv6officialfilt2_chrII.5829 1.0000 37 ce6_ct_phastv6officialfilt2_chrII.5830 1.0000 64
ce6_ct_phastv6officialfilt2_chrII.5831 1.0000 45 ce6_ct_phastv6officialfilt2_chrII.5990 1.0000 27
ce6_ct_phastv6officialfilt2_chrII.6036 1.0000 21 ce6_ct_phastv6officialfilt2_chrII.6103 1.0000 38
ce6_ct_phastv6officialfilt2_chrII.6260 1.0000 100 ce6_ct_phastv6officialfilt2_chrII.6292 1.0000 36
ce6_ct_phastv6officialfilt2_chrII.6337 1.0000 30 ce6_ct_phastv6officialfilt2_chrII.6387 1.0000 46
ce6_ct_phastv6officialfilt2_chrII.6388 1.0000 25 ce6_ct_phastv6officialfilt2_chrII.6405 1.0000 49
ce6_ct_phastv6officialfilt2_chrII.6434 1.0000 38 ce6_ct_phastv6officialfilt2_chrII.6472 1.0000 32
ce6_ct_phastv6officialfilt2_chrII.6484 1.0000 38 ce6_ct_phastv6officialfilt2_chrII.6495 1.0000 58
ce6_ct_phastv6officialfilt2_chrII.6536 1.0000 43 ce6_ct_phastv6officialfilt2_chrII.6569 1.0000 43
ce6_ct_phastv6officialfilt2_chrII.6611 1.0000 41 ce6_ct_phastv6officialfilt2_chrII.6619 1.0000 35
ce6_ct_phastv6officialfilt2_chrII.6874 1.0000 59 ce6_ct_phastv6officialfilt2_chrII.6875 1.0000 57
ce6_ct_phastv6officialfilt2_chrII.6926 1.0000 64 ce6_ct_phastv6officialfilt2_chrII.6927 1.0000 30
ce6_ct_phastv6officialfilt2_chrII.6989 1.0000 42 ce6_ct_phastv6officialfilt2_chrII.7031 1.0000 28
ce6_ct_phastv6officialfilt2_chrII.7055 1.0000 48 ce6_ct_phastv6officialfilt2_chrII.7075 1.0000 61
ce6_ct_phastv6officialfilt2_chrII.7088 1.0000 91 ce6_ct_phastv6officialfilt2_chrII.7090 1.0000 23
ce6_ct_phastv6officialfilt2_chrII.7137 1.0000 73 ce6_ct_phastv6officialfilt2_chrII.7145 1.0000 51
ce6_ct_phastv6officialfilt2_chrII.7152 1.0000 57 ce6_ct_phastv6officialfilt2_chrII.7153 1.0000 27
ce6_ct_phastv6officialfilt2_chrII.7174 1.0000 31 ce6_ct_phastv6officialfilt2_chrII.7181 1.0000 35
ce6_ct_phastv6officialfilt2_chrII.7278 1.0000 24 ce6_ct_phastv6officialfilt2_chrII.7327 1.0000 30
ce6_ct_phastv6officialfilt2_chrII.7448 1.0000 86 ce6_ct_phastv6officialfilt2_chrII.7467 1.0000 37
ce6_ct_phastv6officialfilt2_chrII.7476 1.0000 37 ce6_ct_phastv6officialfilt2_chrII.7520 1.0000 45
ce6_ct_phastv6officialfilt2_chrII.7739 1.0000 25 ce6_ct_phastv6officialfilt2_chrII.7802 1.0000 32
ce6_ct_phastv6officialfilt2_chrII.7826 1.0000 29 ce6_ct_phastv6officialfilt2_chrII.8050 1.0000 56
ce6_ct_phastv6officialfilt2_chrII.8052 1.0000 38 ce6_ct_phastv6officialfilt2_chrII.8083 1.0000 36
ce6_ct_phastv6officialfilt2_chrII.8134 1.0000 56 ce6_ct_phastv6officialfilt2_chrII.8189 1.0000 81
ce6_ct_phastv6officialfilt2_chrII.8190 1.0000 62 ce6_ct_phastv6officialfilt2_chrII.8265 1.0000 23
ce6_ct_phastv6officialfilt2_chrII.8458 1.0000 43 ce6_ct_phastv6officialfilt2_chrII.8487 1.0000 31
ce6_ct_phastv6officialfilt2_chrII.8511 1.0000 24 ce6_ct_phastv6officialfilt2_chrII.8752 1.0000 89
ce6_ct_phastv6officialfilt2_chrII.8754 1.0000 47 ce6_ct_phastv6officialfilt2_chrII.8771 1.0000 64
ce6_ct_phastv6officialfilt2_chrII.9001 1.0000 41 ce6_ct_phastv6officialfilt2_chrII.9060 1.0000 25
ce6_ct_phastv6officialfilt2_chrII.9228 1.0000 37 ce6_ct_phastv6officialfilt2_chrII.9235 1.0000 40
ce6_ct_phastv6officialfilt2_chrII.9429 1.0000 33 ce6_ct_phastv6officialfilt2_chrII.9528 1.0000 24
ce6_ct_phastv6officialfilt2_chrII.9529 1.0000 25 ce6_ct_phastv6officialfilt2_chrII.9531 1.0000 49
ce6_ct_phastv6officialfilt2_chrII.9615 1.0000 23 ce6_ct_phastv6officialfilt2_chrII.9622 1.0000 32
ce6_ct_phastv6officialfilt2_chrII.9631 1.0000 23 ce6_ct_phastv6officialfilt2_chrII.9681 1.0000 27
ce6_ct_phastv6officialfilt2_chrII.9737 1.0000 45 ce6_ct_phastv6officialfilt2_chrII.9744 1.0000 36
ce6_ct_phastv6officialfilt2_chrII.9776 1.0000 37 ce6_ct_phastv6officialfilt2_chrII.9797 1.0000 63
ce6_ct_phastv6officialfilt2_chrII.9799 1.0000 35 ce6_ct_phastv6officialfilt2_chrII.9835 1.0000 21
ce6_ct_phastv6officialfilt2_chrII.9887 1.0000 37 ce6_ct_phastv6officialfilt2_chrII.9950 1.0000 20
ce6_ct_phastv6officialfilt2_chrII.9951 1.0000 34 ce6_ct_phastv6officialfilt2_chrII.10044 1.0000 45
ce6_ct_phastv6officialfilt2_chrII.10055 1.0000 77 ce6_ct_phastv6officialfilt2_chrII.10057 1.0000 39
ce6_ct_phastv6officialfilt2_chrII.10075 1.0000 31 ce6_ct_phastv6officialfilt2_chrII.10076 1.0000 33
ce6_ct_phastv6officialfilt2_chrII.10208 1.0000 49 ce6_ct_phastv6officialfilt2_chrII.10468 1.0000 28
ce6_ct_phastv6officialfilt2_chrII.10545 1.0000 27 ce6_ct_phastv6officialfilt2_chrII.10592 1.0000 36
ce6_ct_phastv6officialfilt2_chrII.10631 1.0000 22 ce6_ct_phastv6officialfilt2_chrII.10719 1.0000 48
ce6_ct_phastv6officialfilt2_chrII.10758 1.0000 68 ce6_ct_phastv6officialfilt2_chrII.10861 1.0000 26
ce6_ct_phastv6officialfilt2_chrII.10911 1.0000 47 ce6_ct_phastv6officialfilt2_chrII.10916 1.0000 46
ce6_ct_phastv6officialfilt2_chrII.10921 1.0000 58 ce6_ct_phastv6officialfilt2_chrII.10927 1.0000 23
ce6_ct_phastv6officialfilt2_chrII.11080 1.0000 31 ce6_ct_phastv6officialfilt2_chrII.11148 1.0000 23
ce6_ct_phastv6officialfilt2_chrII.11165 1.0000 57 ce6_ct_phastv6officialfilt2_chrII.11217 1.0000 22
ce6_ct_phastv6officialfilt2_chrII.11279 1.0000 21 ce6_ct_phastv6officialfilt2_chrII.11308 1.0000 29
ce6_ct_phastv6officialfilt2_chrII.11451 1.0000 72 ce6_ct_phastv6officialfilt2_chrII.11452 1.0000 38
ce6_ct_phastv6officialfilt2_chrII.11455 1.0000 59 ce6_ct_phastv6officialfilt2_chrII.11464 1.0000 59
ce6_ct_phastv6officialfilt2_chrII.11465 1.0000 20 ce6_ct_phastv6officialfilt2_chrII.11498 1.0000 20
ce6_ct_phastv6officialfilt2_chrII.11560 1.0000 50 ce6_ct_phastv6officialfilt2_chrII.11575 1.0000 44
ce6_ct_phastv6officialfilt2_chrII.11588 1.0000 47 ce6_ct_phastv6officialfilt2_chrII.11610 1.0000 25
ce6_ct_phastv6officialfilt2_chrII.11655 1.0000 44 ce6_ct_phastv6officialfilt2_chrII.11662 1.0000 31
ce6_ct_phastv6officialfilt2_chrII.11682 1.0000 74 ce6_ct_phastv6officialfilt2_chrII.11683 1.0000 25
ce6_ct_phastv6officialfilt2_chrII.11913 1.0000 36 ce6_ct_phastv6officialfilt2_chrII.11922 1.0000 59
ce6_ct_phastv6officialfilt2_chrII.12001 1.0000 49 ce6_ct_phastv6officialfilt2_chrII.12095 1.0000 29
ce6_ct_phastv6officialfilt2_chrII.12134 1.0000 21 ce6_ct_phastv6officialfilt2_chrII.12187 1.0000 59
ce6_ct_phastv6officialfilt2_chrII.12188 1.0000 25 ce6_ct_phastv6officialfilt2_chrII.12211 1.0000 75
ce6_ct_phastv6officialfilt2_chrII.12271 1.0000 21 ce6_ct_phastv6officialfilt2_chrII.12272 1.0000 47
ce6_ct_phastv6officialfilt2_chrII.12293 1.0000 40 ce6_ct_phastv6officialfilt2_chrII.12295 1.0000 46
ce6_ct_phastv6officialfilt2_chrII.12336 1.0000 27 ce6_ct_phastv6officialfilt2_chrII.12337 1.0000 37
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ce6_ct_phastv6officialfilt2_chrIII.2474 1.0000 28 ce6_ct_phastv6officialfilt2_chrIII.2478 1.0000 44
ce6_ct_phastv6officialfilt2_chrIII.2488 1.0000 25 ce6_ct_phastv6officialfilt2_chrIII.2489 1.0000 27
ce6_ct_phastv6officialfilt2_chrIII.2501 1.0000 36 ce6_ct_phastv6officialfilt2_chrIII.2521 1.0000 21
ce6_ct_phastv6officialfilt2_chrIII.2525 1.0000 44 ce6_ct_phastv6officialfilt2_chrIII.2542 1.0000 27
ce6_ct_phastv6officialfilt2_chrIII.2545 1.0000 32 ce6_ct_phastv6officialfilt2_chrIII.2555 1.0000 58
ce6_ct_phastv6officialfilt2_chrIII.2558 1.0000 27 ce6_ct_phastv6officialfilt2_chrIII.2586 1.0000 24
ce6_ct_phastv6officialfilt2_chrIII.2613 1.0000 25 ce6_ct_phastv6officialfilt2_chrIII.2614 1.0000 33
ce6_ct_phastv6officialfilt2_chrIII.2617 1.0000 24 ce6_ct_phastv6officialfilt2_chrIII.2638 1.0000 28
ce6_ct_phastv6officialfilt2_chrIII.2651 1.0000 30 ce6_ct_phastv6officialfilt2_chrIII.2653 1.0000 29
ce6_ct_phastv6officialfilt2_chrIII.2660 1.0000 37 ce6_ct_phastv6officialfilt2_chrIII.2669 1.0000 22
ce6_ct_phastv6officialfilt2_chrIII.2678 1.0000 37 ce6_ct_phastv6officialfilt2_chrIII.2688 1.0000 34
ce6_ct_phastv6officialfilt2_chrIII.2689 1.0000 40 ce6_ct_phastv6officialfilt2_chrIII.2690 1.0000 27
ce6_ct_phastv6officialfilt2_chrIII.2695 1.0000 33 ce6_ct_phastv6officialfilt2_chrIII.2738 1.0000 31
ce6_ct_phastv6officialfilt2_chrIII.2749 1.0000 47 ce6_ct_phastv6officialfilt2_chrIII.2750 1.0000 34
ce6_ct_phastv6officialfilt2_chrIII.2772 1.0000 28 ce6_ct_phastv6officialfilt2_chrIII.2773 1.0000 48
ce6_ct_phastv6officialfilt2_chrIII.2837 1.0000 37 ce6_ct_phastv6officialfilt2_chrIII.2907 1.0000 36
ce6_ct_phastv6officialfilt2_chrIII.2908 1.0000 30 ce6_ct_phastv6officialfilt2_chrIII.2923 1.0000 39
ce6_ct_phastv6officialfilt2_chrIII.2932 1.0000 40 ce6_ct_phastv6officialfilt2_chrIII.2978 1.0000 37
ce6_ct_phastv6officialfilt2_chrIII.3012 1.0000 32 ce6_ct_phastv6officialfilt2_chrIII.3031 1.0000 33
ce6_ct_phastv6officialfilt2_chrIII.3050 1.0000 28 ce6_ct_phastv6officialfilt2_chrIII.3114 1.0000 92
ce6_ct_phastv6officialfilt2_chrIII.3115 1.0000 46 ce6_ct_phastv6officialfilt2_chrIII.3150 1.0000 34
ce6_ct_phastv6officialfilt2_chrIII.3164 1.0000 55 ce6_ct_phastv6officialfilt2_chrIII.3168 1.0000 44
ce6_ct_phastv6officialfilt2_chrIII.3314 1.0000 25 ce6_ct_phastv6officialfilt2_chrIII.3328 1.0000 54
ce6_ct_phastv6officialfilt2_chrIII.3376 1.0000 28 ce6_ct_phastv6officialfilt2_chrIII.3413 1.0000 23
ce6_ct_phastv6officialfilt2_chrIII.3427 1.0000 30 ce6_ct_phastv6officialfilt2_chrIII.3450 1.0000 49
ce6_ct_phastv6officialfilt2_chrIII.3568 1.0000 52 ce6_ct_phastv6officialfilt2_chrIII.3569 1.0000 36
ce6_ct_phastv6officialfilt2_chrIII.3583 1.0000 27 ce6_ct_phastv6officialfilt2_chrIII.3587 1.0000 62
ce6_ct_phastv6officialfilt2_chrIII.3590 1.0000 47 ce6_ct_phastv6officialfilt2_chrIII.3593 1.0000 51
ce6_ct_phastv6officialfilt2_chrIII.3788 1.0000 24 ce6_ct_phastv6officialfilt2_chrIII.3873 1.0000 72
ce6_ct_phastv6officialfilt2_chrIII.3939 1.0000 23 ce6_ct_phastv6officialfilt2_chrIII.4025 1.0000 84
ce6_ct_phastv6officialfilt2_chrIII.4026 1.0000 25 ce6_ct_phastv6officialfilt2_chrIII.4088 1.0000 32
ce6_ct_phastv6officialfilt2_chrIII.4172 1.0000 25 ce6_ct_phastv6officialfilt2_chrIII.4225 1.0000 27
ce6_ct_phastv6officialfilt2_chrIII.4226 1.0000 21 ce6_ct_phastv6officialfilt2_chrIII.4282 1.0000 39
ce6_ct_phastv6officialfilt2_chrIII.4288 1.0000 30 ce6_ct_phastv6officialfilt2_chrIII.4381 1.0000 31
ce6_ct_phastv6officialfilt2_chrIII.4389 1.0000 33 ce6_ct_phastv6officialfilt2_chrIII.4401 1.0000 26
ce6_ct_phastv6officialfilt2_chrIII.4567 1.0000 28 ce6_ct_phastv6officialfilt2_chrIII.4656 1.0000 36
ce6_ct_phastv6officialfilt2_chrIII.4657 1.0000 21 ce6_ct_phastv6officialfilt2_chrIII.4686 1.0000 43
ce6_ct_phastv6officialfilt2_chrIII.4703 1.0000 23 ce6_ct_phastv6officialfilt2_chrIII.4740 1.0000 59
ce6_ct_phastv6officialfilt2_chrIII.4757 1.0000 59 ce6_ct_phastv6officialfilt2_chrIII.4920 1.0000 21
ce6_ct_phastv6officialfilt2_chrIII.4921 1.0000 27 ce6_ct_phastv6officialfilt2_chrIII.5057 1.0000 34
ce6_ct_phastv6officialfilt2_chrIII.5161 1.0000 28 ce6_ct_phastv6officialfilt2_chrIII.5264 1.0000 36
ce6_ct_phastv6officialfilt2_chrIII.5265 1.0000 49 ce6_ct_phastv6officialfilt2_chrIII.5322 1.0000 34
ce6_ct_phastv6officialfilt2_chrIII.5419 1.0000 36 ce6_ct_phastv6officialfilt2_chrIII.5438 1.0000 25
ce6_ct_phastv6officialfilt2_chrIII.5440 1.0000 46 ce6_ct_phastv6officialfilt2_chrIII.5518 1.0000 21
ce6_ct_phastv6officialfilt2_chrIII.5755 1.0000 39 ce6_ct_phastv6officialfilt2_chrIII.5859 1.0000 59
ce6_ct_phastv6officialfilt2_chrIII.5897 1.0000 32 ce6_ct_phastv6officialfilt2_chrIII.5898 1.0000 30
ce6_ct_phastv6officialfilt2_chrIII.5899 1.0000 19 ce6_ct_phastv6officialfilt2_chrIII.5965 1.0000 35
ce6_ct_phastv6officialfilt2_chrIII.5977 1.0000 30 ce6_ct_phastv6officialfilt2_chrIII.6010 1.0000 32
ce6_ct_phastv6officialfilt2_chrIII.6030 1.0000 40 ce6_ct_phastv6officialfilt2_chrIII.6037 1.0000 30
ce6_ct_phastv6officialfilt2_chrIII.6083 1.0000 29 ce6_ct_phastv6officialfilt2_chrIII.6191 1.0000 49
ce6_ct_phastv6officialfilt2_chrIII.6300 1.0000 33 ce6_ct_phastv6officialfilt2_chrIII.6355 1.0000 34
ce6_ct_phastv6officialfilt2_chrIII.6521 1.0000 42 ce6_ct_phastv6officialfilt2_chrIII.6711 1.0000 28
ce6_ct_phastv6officialfilt2_chrIII.6743 1.0000 20 ce6_ct_phastv6officialfilt2_chrIII.6869 1.0000 27
ce6_ct_phastv6officialfilt2_chrIII.6875 1.0000 24 ce6_ct_phastv6officialfilt2_chrIII.6923 1.0000 30
ce6_ct_phastv6officialfilt2_chrIII.6924 1.0000 32 ce6_ct_phastv6officialfilt2_chrIII.6988 1.0000 36
ce6_ct_phastv6officialfilt2_chrIII.7042 1.0000 45 ce6_ct_phastv6officialfilt2_chrIII.7043 1.0000 35
ce6_ct_phastv6officialfilt2_chrIII.7048 1.0000 42 ce6_ct_phastv6officialfilt2_chrIII.7049 1.0000 40
ce6_ct_phastv6officialfilt2_chrIII.7060 1.0000 50 ce6_ct_phastv6officialfilt2_chrIII.7113 1.0000 26
ce6_ct_phastv6officialfilt2_chrIII.7236 1.0000 48 ce6_ct_phastv6officialfilt2_chrIII.7327 1.0000 41
ce6_ct_phastv6officialfilt2_chrIII.7335 1.0000 59 ce6_ct_phastv6officialfilt2_chrIII.7337 1.0000 44
ce6_ct_phastv6officialfilt2_chrIII.7338 1.0000 35 ce6_ct_phastv6officialfilt2_chrIII.7339 1.0000 62
ce6_ct_phastv6officialfilt2_chrIII.7340 1.0000 49 ce6_ct_phastv6officialfilt2_chrIII.7511 1.0000 33
ce6_ct_phastv6officialfilt2_chrIII.7514 1.0000 35 ce6_ct_phastv6officialfilt2_chrIII.7518 1.0000 47
ce6_ct_phastv6officialfilt2_chrIII.7578 1.0000 33 ce6_ct_phastv6officialfilt2_chrIII.7582 1.0000 31
ce6_ct_phastv6officialfilt2_chrIII.7604 1.0000 23 ce6_ct_phastv6officialfilt2_chrIII.7607 1.0000 158
ce6_ct_phastv6officialfilt2_chrIII.7713 1.0000 27 ce6_ct_phastv6officialfilt2_chrIII.7802 1.0000 41
ce6_ct_phastv6officialfilt2_chrIII.7854 1.0000 45 ce6_ct_phastv6officialfilt2_chrIII.7995 1.0000 50
ce6_ct_phastv6officialfilt2_chrIII.8004 1.0000 21 ce6_ct_phastv6officialfilt2_chrIII.8028 1.0000 35
ce6_ct_phastv6officialfilt2_chrIII.8128 1.0000 27 ce6_ct_phastv6officialfilt2_chrIII.8238 1.0000 25
ce6_ct_phastv6officialfilt2_chrIII.8284 1.0000 32 ce6_ct_phastv6officialfilt2_chrIII.8324 1.0000 84
ce6_ct_phastv6officialfilt2_chrIII.8457 1.0000 32 ce6_ct_phastv6officialfilt2_chrIII.8496 1.0000 32
ce6_ct_phastv6officialfilt2_chrIII.8521 1.0000 21 ce6_ct_phastv6officialfilt2_chrIII.8528 1.0000 49
ce6_ct_phastv6officialfilt2_chrIII.8604 1.0000 23 ce6_ct_phastv6officialfilt2_chrIII.8721 1.0000 40
ce6_ct_phastv6officialfilt2_chrIII.8792 1.0000 58 ce6_ct_phastv6officialfilt2_chrIII.8793 1.0000 55
ce6_ct_phastv6officialfilt2_chrIII.8814 1.0000 24 ce6_ct_phastv6officialfilt2_chrIII.8815 1.0000 32
ce6_ct_phastv6officialfilt2_chrIII.8913 1.0000 33 ce6_ct_phastv6officialfilt2_chrIII.8914 1.0000 40
ce6_ct_phastv6officialfilt2_chrIII.9022 1.0000 42 ce6_ct_phastv6officialfilt2_chrIII.9023 1.0000 43
ce6_ct_phastv6officialfilt2_chrIII.9028 1.0000 56 ce6_ct_phastv6officialfilt2_chrIII.9029 1.0000 43
ce6_ct_phastv6officialfilt2_chrIII.9035 1.0000 43 ce6_ct_phastv6officialfilt2_chrIII.9058 1.0000 33
ce6_ct_phastv6officialfilt2_chrIII.9084 1.0000 33 ce6_ct_phastv6officialfilt2_chrIII.9096 1.0000 49
ce6_ct_phastv6officialfilt2_chrIII.9271 1.0000 49 ce6_ct_phastv6officialfilt2_chrIII.9365 1.0000 52
ce6_ct_phastv6officialfilt2_chrIII.9374 1.0000 37 ce6_ct_phastv6officialfilt2_chrIII.9465 1.0000 20
ce6_ct_phastv6officialfilt2_chrIII.9621 1.0000 32 ce6_ct_phastv6officialfilt2_chrIII.9622 1.0000 48
ce6_ct_phastv6officialfilt2_chrIII.9680 1.0000 41 ce6_ct_phastv6officialfilt2_chrIII.9720 1.0000 52
ce6_ct_phastv6officialfilt2_chrIII.9757 1.0000 35 ce6_ct_phastv6officialfilt2_chrIII.9784 1.0000 22
ce6_ct_phastv6officialfilt2_chrIII.9879 1.0000 35 ce6_ct_phastv6officialfilt2_chrIII.9882 1.0000 34
ce6_ct_phastv6officialfilt2_chrIII.9941 1.0000 64 ce6_ct_phastv6officialfilt2_chrIII.9943 1.0000 23
ce6_ct_phastv6officialfilt2_chrIII.9945 1.0000 27 ce6_ct_phastv6officialfilt2_chrIII.9981 1.0000 21
ce6_ct_phastv6officialfilt2_chrIII.9994 1.0000 52 ce6_ct_phastv6officialfilt2_chrIII.10535 1.0000 26
ce6_ct_phastv6officialfilt2_chrIII.10583 1.0000 29 ce6_ct_phastv6officialfilt2_chrIII.10624 1.0000 21
ce6_ct_phastv6officialfilt2_chrIII.10639 1.0000 29 ce6_ct_phastv6officialfilt2_chrIII.10759 1.0000 36
ce6_ct_phastv6officialfilt2_chrIII.10784 1.0000 20 ce6_ct_phastv6officialfilt2_chrIII.10849 1.0000 41
ce6_ct_phastv6officialfilt2_chrIII.10881 1.0000 51 ce6_ct_phastv6officialfilt2_chrIII.11027 1.0000 51
ce6_ct_phastv6officialfilt2_chrIII.11077 1.0000 39 ce6_ct_phastv6officialfilt2_chrIII.11274 1.0000 51
ce6_ct_phastv6officialfilt2_chrIII.11308 1.0000 37 ce6_ct_phastv6officialfilt2_chrIII.11351 1.0000 24
ce6_ct_phastv6officialfilt2_chrIII.11398 1.0000 40 ce6_ct_phastv6officialfilt2_chrIII.11427 1.0000 34
ce6_ct_phastv6officialfilt2_chrIII.11429 1.0000 25 ce6_ct_phastv6officialfilt2_chrIII.11490 1.0000 26
ce6_ct_phastv6officialfilt2_chrIII.11491 1.0000 46 ce6_ct_phastv6officialfilt2_chrIII.11631 1.0000 42
ce6_ct_phastv6officialfilt2_chrIII.11658 1.0000 51 ce6_ct_phastv6officialfilt2_chrIII.11703 1.0000 44
ce6_ct_phastv6officialfilt2_chrIII.11704 1.0000 38 ce6_ct_phastv6officialfilt2_chrIII.11705 1.0000 45
ce6_ct_phastv6officialfilt2_chrIII.11706 1.0000 48 ce6_ct_phastv6officialfilt2_chrIII.11741 1.0000 26
ce6_ct_phastv6officialfilt2_chrIII.11882 1.0000 43 ce6_ct_phastv6officialfilt2_chrIII.11968 1.0000 66
ce6_ct_phastv6officialfilt2_chrIII.12042 1.0000 40 ce6_ct_phastv6officialfilt2_chrIII.12051 1.0000 60
ce6_ct_phastv6officialfilt2_chrIII.12052 1.0000 39 ce6_ct_phastv6officialfilt2_chrIII.12094 1.0000 44
ce6_ct_phastv6officialfilt2_chrIII.12104 1.0000 34 ce6_ct_phastv6officialfilt2_chrIII.12512 1.0000 35
ce6_ct_phastv6officialfilt2_chrIII.12616 1.0000 23 ce6_ct_phastv6officialfilt2_chrIII.12620 1.0000 46
ce6_ct_phastv6officialfilt2_chrIII.12630 1.0000 38 ce6_ct_phastv6officialfilt2_chrIII.12636 1.0000 28
ce6_ct_phastv6officialfilt2_chrIII.12638 1.0000 36 ce6_ct_phastv6officialfilt2_chrIII.12653 1.0000 27
ce6_ct_phastv6officialfilt2_chrIII.12671 1.0000 32 ce6_ct_phastv6officialfilt2_chrIII.12691 1.0000 22
ce6_ct_phastv6officialfilt2_chrIII.12692 1.0000 48 ce6_ct_phastv6officialfilt2_chrIII.12751 1.0000 24
ce6_ct_phastv6officialfilt2_chrIII.12778 1.0000 58 ce6_ct_phastv6officialfilt2_chrIII.12787 1.0000 29
ce6_ct_phastv6officialfilt2_chrIII.12811 1.0000 25 ce6_ct_phastv6officialfilt2_chrIII.12827 1.0000 32
ce6_ct_phastv6officialfilt2_chrIII.12860 1.0000 53 ce6_ct_phastv6officialfilt2_chrIII.12885 1.0000 32
ce6_ct_phastv6officialfilt2_chrIII.12888 1.0000 45 ce6_ct_phastv6officialfilt2_chrIII.12918 1.0000 45
ce6_ct_phastv6officialfilt2_chrIII.12962 1.0000 30 ce6_ct_phastv6officialfilt2_chrIII.12963 1.0000 32
ce6_ct_phastv6officialfilt2_chrIII.12967 1.0000 33 ce6_ct_phastv6officialfilt2_chrIII.13008 1.0000 49
ce6_ct_phastv6officialfilt2_chrIII.13017 1.0000 66 ce6_ct_phastv6officialfilt2_chrIII.13046 1.0000 22
ce6_ct_phastv6officialfilt2_chrIII.13074 1.0000 46 ce6_ct_phastv6officialfilt2_chrIII.13077 1.0000 30
ce6_ct_phastv6officialfilt2_chrIII.13102 1.0000 43 ce6_ct_phastv6officialfilt2_chrIII.13104 1.0000 23
ce6_ct_phastv6officialfilt2_chrIII.13126 1.0000 26 ce6_ct_phastv6officialfilt2_chrIII.13188 1.0000 39
ce6_ct_phastv6officialfilt2_chrIII.13270 1.0000 23 ce6_ct_phastv6officialfilt2_chrIII.13313 1.0000 21
ce6_ct_phastv6officialfilt2_chrIII.13330 1.0000 36 ce6_ct_phastv6officialfilt2_chrIII.13343 1.0000 30
ce6_ct_phastv6officialfilt2_chrIII.13382 1.0000 28 ce6_ct_phastv6officialfilt2_chrIII.13417 1.0000 17
ce6_ct_phastv6officialfilt2_chrIII.13427 1.0000 34 ce6_ct_phastv6officialfilt2_chrIII.13436 1.0000 25
ce6_ct_phastv6officialfilt2_chrIII.13459 1.0000 22 ce6_ct_phastv6officialfilt2_chrIII.13467 1.0000 52
ce6_ct_phastv6officialfilt2_chrIII.13486 1.0000 39 ce6_ct_phastv6officialfilt2_chrIII.13495 1.0000 48
ce6_ct_phastv6officialfilt2_chrIII.13499 1.0000 31 ce6_ct_phastv6officialfilt2_chrIII.13517 1.0000 35
ce6_ct_phastv6officialfilt2_chrIII.13524 1.0000 26 ce6_ct_phastv6officialfilt2_chrIII.13561 1.0000 30
ce6_ct_phastv6officialfilt2_chrIII.13562 1.0000 23 ce6_ct_phastv6officialfilt2_chrIII.13615 1.0000 36
ce6_ct_phastv6officialfilt2_chrIII.13667 1.0000 35 ce6_ct_phastv6officialfilt2_chrIII.13673 1.0000 26
ce6_ct_phastv6officialfilt2_chrIII.13682 1.0000 22 ce6_ct_phastv6officialfilt2_chrIII.13756 1.0000 24
ce6_ct_phastv6officialfilt2_chrIII.13757 1.0000 21 ce6_ct_phastv6officialfilt2_chrIII.13808 1.0000 43
ce6_ct_phastv6officialfilt2_chrIII.13813 1.0000 23 ce6_ct_phastv6officialfilt2_chrIII.13864 1.0000 69
ce6_ct_phastv6officialfilt2_chrIII.13883 1.0000 53 ce6_ct_phastv6officialfilt2_chrIII.13886 1.0000 53
ce6_ct_phastv6officialfilt2_chrIII.13964 1.0000 56 ce6_ct_phastv6officialfilt2_chrIII.13968 1.0000 52
ce6_ct_phastv6officialfilt2_chrIII.13991 1.0000 31 ce6_ct_phastv6officialfilt2_chrIII.13992 1.0000 34
ce6_ct_phastv6officialfilt2_chrIII.13993 1.0000 37 ce6_ct_phastv6officialfilt2_chrIII.13994 1.0000 34
ce6_ct_phastv6officialfilt2_chrIII.14009 1.0000 27 ce6_ct_phastv6officialfilt2_chrIII.14030 1.0000 30
ce6_ct_phastv6officialfilt2_chrIII.14078 1.0000 47 ce6_ct_phastv6officialfilt2_chrIII.14083 1.0000 31
ce6_ct_phastv6officialfilt2_chrIII.14087 1.0000 32 ce6_ct_phastv6officialfilt2_chrIII.14088 1.0000 42
ce6_ct_phastv6officialfilt2_chrIII.14123 1.0000 47 ce6_ct_phastv6officialfilt2_chrIII.14207 1.0000 31
ce6_ct_phastv6officialfilt2_chrIII.14225 1.0000 39 ce6_ct_phastv6officialfilt2_chrIII.14239 1.0000 41
ce6_ct_phastv6officialfilt2_chrIII.14240 1.0000 37 ce6_ct_phastv6officialfilt2_chrIII.14268 1.0000 24
ce6_ct_phastv6officialfilt2_chrIII.14444 1.0000 24 ce6_ct_phastv6officialfilt2_chrIII.14501 1.0000 38
ce6_ct_phastv6officialfilt2_chrIII.14594 1.0000 40 ce6_ct_phastv6officialfilt2_chrIII.14621 1.0000 28
ce6_ct_phastv6officialfilt2_chrIII.14661 1.0000 28 ce6_ct_phastv6officialfilt2_chrIII.14666 1.0000 29
ce6_ct_phastv6officialfilt2_chrIII.14687 1.0000 22 ce6_ct_phastv6officialfilt2_chrIII.14707 1.0000 24
ce6_ct_phastv6officialfilt2_chrIII.14764 1.0000 35 ce6_ct_phastv6officialfilt2_chrIII.14779 1.0000 43
ce6_ct_phastv6officialfilt2_chrIII.14807 1.0000 27 ce6_ct_phastv6officialfilt2_chrIII.14873 1.0000 28
ce6_ct_phastv6officialfilt2_chrIII.14874 1.0000 45 ce6_ct_phastv6officialfilt2_chrIII.14941 1.0000 36
ce6_ct_phastv6officialfilt2_chrIII.14959 1.0000 31 ce6_ct_phastv6officialfilt2_chrIII.15014 1.0000 27
ce6_ct_phastv6officialfilt2_chrIII.15031 1.0000 37 ce6_ct_phastv6officialfilt2_chrIII.15032 1.0000 31
ce6_ct_phastv6officialfilt2_chrIII.15144 1.0000 29 ce6_ct_phastv6officialfilt2_chrIII.15166 1.0000 31
ce6_ct_phastv6officialfilt2_chrIII.15185 1.0000 21 ce6_ct_phastv6officialfilt2_chrIII.15187 1.0000 33
ce6_ct_phastv6officialfilt2_chrIII.15233 1.0000 23 ce6_ct_phastv6officialfilt2_chrIII.15345 1.0000 34
ce6_ct_phastv6officialfilt2_chrIII.15363 1.0000 45 ce6_ct_phastv6officialfilt2_chrIII.15386 1.0000 24
ce6_ct_phastv6officialfilt2_chrIII.15602 1.0000 50 ce6_ct_phastv6officialfilt2_chrIII.15611 1.0000 41
ce6_ct_phastv6officialfilt2_chrIII.15678 1.0000 46 ce6_ct_phastv6officialfilt2_chrIII.15767 1.0000 36
ce6_ct_phastv6officialfilt2_chrIII.15826 1.0000 29 ce6_ct_phastv6officialfilt2_chrIII.15833 1.0000 28
ce6_ct_phastv6officialfilt2_chrIII.15851 1.0000 23 ce6_ct_phastv6officialfilt2_chrIII.15854 1.0000 54
ce6_ct_phastv6officialfilt2_chrIII.15858 1.0000 43 ce6_ct_phastv6officialfilt2_chrIII.15884 1.0000 28

COMMAND LINE SUMMARY

This information can also be useful in the event you wish to report a
problem with the MEME software.

command: meme ../phastv6_official_filt2_flank5nt.fa -o ../off_filt2_f5_mots.m1d.dir -dna -mod anr -nmotifs 50 -evt 0.05 -minw 6 -maxw 18 -bfile ../ce6_bg.meme.markov1.txt -revcomp -maxsize 200000 
model: mod= anr nmotifs= 50 evt= 0.05
object function= E-value of product of p-values
width: minw= 6 maxw= 18 minic= 0.00
width: wg= 11 ws= 1 endgaps= yes
nsites: minsites= 2 maxsites= 50 wnsites= 0.8
theta: prob= 1 spmap= uni spfuzz= 0.5
em: prior= dirichlet b= 0.01 maxiter= 50
distance= 1e-05
data: n= 104355 N= 2672
strands: + -
sample: seed= 0 seqfrac= 1
Letter frequencies in dataset:
A 0.306 C 0.194 G 0.194 T 0.306
Background letter frequencies (from ../ce6_bg.meme.markov1.txt):
A 0.339 C 0.162 G 0.162 T 0.339

P N
MOTIF 1 width = 13 sites = 50 llr = 893 E-value = 2.5e-162

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
23.2 (bits)
Relative Entropy
25.8 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIII.15187 - 11 2.09e-09 TCGCGGCTT CTCTGCGTCTCTC GATTTCGCAT
ce6_ct_phastv6officialfilt2_chrIII.14707 - 3 2.09e-09 CCATGTTT CTCTGCGTCTCTC AGC
ce6_ct_phastv6officialfilt2_chrIII.12691 - 5 2.09e-09 CTTT CTCTGCGTCTCTC TCCAT
ce6_ct_phastv6officialfilt2_chrIII.12630 + 20 2.09e-09 ATAGACAATT CTCTGCGTCTCTC ACGCT
ce6_ct_phastv6officialfilt2_chrIII.9882 - 8 2.09e-09 GTTTATTTGT CTCTGCGTCTCTC AAACTTGA
ce6_ct_phastv6officialfilt2_chrIII.7713 + 11 2.09e-09 TCTCATTTAT CTCTGCGTCTCTC CAA
ce6_ct_phastv6officialfilt2_chrIII.3115 - 11 2.09e-09 TTCTCTGTTT CTCTGCGTCTCTC ATCTCTGGGG
ce6_ct_phastv6officialfilt2_chrIII.2065 - 7 2.09e-09 CAATTTAACT CTCTGCGTCTCTC ACACTCT
ce6_ct_phastv6officialfilt2_chrIII.1618 - 15 2.09e-09 GCCCGATTT CTCTGCGTCTCTC GCTCTCTCAC
ce6_ct_phastv6officialfilt2_chrIV.14863 - 12 2.09e-09 CAACTTTATT CTCTGCGTCTCTC CCTCCCTCCC
ce6_ct_phastv6officialfilt2_chrIV.1075 + 6 2.09e-09 CCGTCT CTCTGCGTCTCTC ACTCTTACAC
ce6_ct_phastv6officialfilt2_chrII.1726 + 7 2.09e-09 CTCATTT CTCTGCGTCTCTC CCCTTT
ce6_ct_phastv6officialfilt2_chrV.15000 + 5 2.09e-09 GTTTT CTCTGCGTCTCTC TCTC
ce6_ct_phastv6officialfilt2_chrV.13950 - 6 2.09e-09 CGCCA CTCTGCGTCTCTC CCCCTC
ce6_ct_phastv6officialfilt2_chrV.12415 - 13 2.09e-09 ATTT CTCTGCGTCTCTC CTTAATTATT
ce6_ct_phastv6officialfilt2_chrV.2409 + 6 2.09e-09 CTCCCT CTCTGCGTCTCTC GCCT
ce6_ct_phastv6officialfilt2_chrV.2408 - 5 2.09e-09 TATTT CTCTGCGTCTCTC GCCTT
ce6_ct_phastv6officialfilt2_chrI.15484 + 9 2.09e-09 ACAAGATTT CTCTGCGTCTCTC ACTTTTT
ce6_ct_phastv6officialfilt2_chrI.13554 - 7 2.09e-09 CTTCAT CTCTGCGTCTCTC ACCACCC
ce6_ct_phastv6officialfilt2_chrIII.14240 + 6 4.19e-09 CGCGTT GTCTGCGTCTCTC CCTCTCGTAC
ce6_ct_phastv6officialfilt2_chrIII.13104 - 4 4.19e-09 AAGAGT GTCTGCGTCTCTC CGTC
ce6_ct_phastv6officialfilt2_chrIII.3427 + 12 4.19e-09 CACTTTAACT GTCTGCGTCTCTC TGCGC
ce6_ct_phastv6officialfilt2_chrIII.2669 - 4 4.19e-09 GCAAT GTCTGCGTCTCTC TCCT
ce6_ct_phastv6officialfilt2_chrIII.2617 + 6 4.19e-09 TCCACT GTCTGCGTCTCTC TCACT
ce6_ct_phastv6officialfilt2_chrIII.1088 + 4 4.19e-09 GTAT GTCTGCGTCTCTC CGAC
ce6_ct_phastv6officialfilt2_chrIV.14752 - 26 4.19e-09 TGTT GTCTGCGTCTCTC GCCTTCAGGT
ce6_ct_phastv6officialfilt2_chrIV.1563 + 24 4.19e-09 GTCTCTAACT GTCTGCGTCTCTC ACACA
ce6_ct_phastv6officialfilt2_chrI.14829 - 22 4.19e-09 CTTTGGGT GTCTGCGTCTCTC TAATTTGCAT
ce6_ct_phastv6officialfilt2_chrI.13707 + 12 4.19e-09 CCCTTTTAGT GTCTGCGTCTCTC CTAA
ce6_ct_phastv6officialfilt2_chrIII.14239 - 22 8.55e-09 TTTGTT CTCTGCGTCTCTT CCCACTACAC
ce6_ct_phastv6officialfilt2_chrIII.14083 - 6 8.55e-09 AACCTGATTT CTCTGCGTCTCTT CGATAG
ce6_ct_phastv6officialfilt2_chrIV.6105 - 12 8.55e-09 TCTGTTTTTT CTCTGCGTCTCTT CATCCCATCC
ce6_ct_phastv6officialfilt2_chrIV.4093 - 28 8.55e-09 AATATT CTCTGCGTCTCTT CGTCTTCACC
ce6_ct_phastv6officialfilt2_chrIV.2499 - 22 8.55e-09 TTTT CTCTGCGTCTCTT CATCCTCCAC
ce6_ct_phastv6officialfilt2_chrIV.2405 - 10 8.55e-09 CTGTGT CTCTGCGTCTCTT CGTCTCCCCT
ce6_ct_phastv6officialfilt2_chrI.9499 - 4 8.55e-09 ATAT CTCTGCGTCTCTT ATCA
ce6_ct_phastv6officialfilt2_chrI.5084 - 6 8.55e-09 AGTCGTTTT CTCTGCGTCTCTT CATGAA
ce6_ct_phastv6officialfilt2_chrII.13309 - 21 1.39e-08 AGT GTCTGCGTCTCTT CGTCTCCCAT
ce6_ct_phastv6officialfilt2_chrII.12271 - 4 1.39e-08 TTGT GTCTGCGTCTCTT ACGG
ce6_ct_phastv6officialfilt2_chrII.9060 + 8 1.39e-08 TGGCAACT GTCTGCGTCTCTT CGTC
ce6_ct_phastv6officialfilt2_chrI.13807 + 4 1.39e-08 GTGT GTCTGCGTCTCTT CAGT
ce6_ct_phastv6officialfilt2_chrI.4972 + 11 1.39e-08 TTGCTTCCGT GTCTGCGTCTCTT GGTC
ce6_ct_phastv6officialfilt2_chrIV.14909 + 8 1.49e-08 GCATGATT GTCTGCGTCTCCC GCT
ce6_ct_phastv6officialfilt2_chrI.13974 - 3 1.49e-08 TCTCATT GTCTGCGTCTCCC CCT
ce6_ct_phastv6officialfilt2_chrV.14041 + 5 1.91e-08 ACACT CTCTGCGTCTCCT CGTTT
ce6_ct_phastv6officialfilt2_chrV.1844 - 2 1.91e-08 ACTCTCGAAT CTCTGCGTCTCTG CG
ce6_ct_phastv6officialfilt2_chrIII.8496 - 13 2.35e-08 TACTAT CTCTGTGTCTCTC ACTCTCTCAC
ce6_ct_phastv6officialfilt2_chrIV.6999 + 7 2.35e-08 CAATGTT CTCTGTGTCTCTC CGCT
ce6_ct_phastv6officialfilt2_chrI.13686 - 19 4.08e-08 TGCCGGTTTT CTCTGCGTATCTC TCTCTCTCTT
ce6_ct_phastv6officialfilt2_chrIII.10784 - 4 4.51e-08 GCT GTCTGCGTCTCTA ACCG

Motif 1 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIII.15187 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrIII.14707 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrIII.12691 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrIII.12630 2.09e-09

+1
ce6_ct_phastv6officialfilt2_chrIII.9882 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrIII.7713 2.09e-09

+1
ce6_ct_phastv6officialfilt2_chrIII.3115 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrIII.2065 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrIII.1618 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrIV.14863 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrIV.1075 2.09e-09

+1
ce6_ct_phastv6officialfilt2_chrII.1726 2.09e-09

+1
ce6_ct_phastv6officialfilt2_chrV.15000 2.09e-09

+1
ce6_ct_phastv6officialfilt2_chrV.13950 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrV.12415 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrV.2409 2.09e-09

+1
ce6_ct_phastv6officialfilt2_chrV.2408 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrI.15484 2.09e-09

+1
ce6_ct_phastv6officialfilt2_chrI.13554 2.09e-09

-1
ce6_ct_phastv6officialfilt2_chrIII.14240 4.19e-09

+1
ce6_ct_phastv6officialfilt2_chrIII.13104 4.19e-09

-1
ce6_ct_phastv6officialfilt2_chrIII.3427 4.19e-09

+1
ce6_ct_phastv6officialfilt2_chrIII.2669 4.19e-09

-1
ce6_ct_phastv6officialfilt2_chrIII.2617 4.19e-09

+1
ce6_ct_phastv6officialfilt2_chrIII.1088 4.19e-09

+1
ce6_ct_phastv6officialfilt2_chrIV.14752 4.19e-09

-1
ce6_ct_phastv6officialfilt2_chrIV.1563 4.19e-09

+1
ce6_ct_phastv6officialfilt2_chrI.14829 4.19e-09

-1
ce6_ct_phastv6officialfilt2_chrI.13707 4.19e-09

+1
ce6_ct_phastv6officialfilt2_chrIII.14239 8.55e-09

-1
ce6_ct_phastv6officialfilt2_chrIII.14083 8.55e-09

-1
ce6_ct_phastv6officialfilt2_chrIV.6105 8.55e-09

-1
ce6_ct_phastv6officialfilt2_chrIV.4093 8.55e-09

-1
ce6_ct_phastv6officialfilt2_chrIV.2499 8.55e-09

-1
ce6_ct_phastv6officialfilt2_chrIV.2405 8.55e-09

-1
ce6_ct_phastv6officialfilt2_chrI.9499 8.55e-09

-1
ce6_ct_phastv6officialfilt2_chrI.5084 8.55e-09

-1
ce6_ct_phastv6officialfilt2_chrII.13309 1.39e-08

-1
ce6_ct_phastv6officialfilt2_chrII.12271 1.39e-08

-1
ce6_ct_phastv6officialfilt2_chrII.9060 1.39e-08

+1
ce6_ct_phastv6officialfilt2_chrI.13807 1.39e-08

+1
ce6_ct_phastv6officialfilt2_chrI.4972 1.39e-08

+1
ce6_ct_phastv6officialfilt2_chrIV.14909 1.49e-08

+1
ce6_ct_phastv6officialfilt2_chrI.13974 1.49e-08

-1
ce6_ct_phastv6officialfilt2_chrV.14041 1.91e-08

+1
ce6_ct_phastv6officialfilt2_chrV.1844 1.91e-08

-1
ce6_ct_phastv6officialfilt2_chrIII.8496 2.35e-08

-1
ce6_ct_phastv6officialfilt2_chrIV.6999 2.35e-08

+1
ce6_ct_phastv6officialfilt2_chrI.13686 4.08e-08

-1
ce6_ct_phastv6officialfilt2_chrIII.10784 4.51e-08

-1
SCALE
| | |
1 25

Motif 1 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 1 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 1 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 1 regular-expression

[CG]TCTGCGTCTCT[CT]

Time 3036.59 secs.

P N
MOTIF 2 width = 16 sites = 50 llr = 863 E-value = 1.7e-144

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
21.3 (bits)
Relative Entropy
24.9 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrV.13873 + 8 8.90e-12 GAAAGGTG CAGTGGAGCGCGCTTG CACTC
ce6_ct_phastv6officialfilt2_chrII.14005 - 11 5.03e-11 ACGCGTGTCT CAATGGAGCGCGCTTG CACGTTGAGT
ce6_ct_phastv6officialfilt2_chrII.4994 + 2 5.03e-11 CT CAGTGGAGCGCACTTG CATTCAT
ce6_ct_phastv6officialfilt2_chrX.15414 - 8 5.03e-11 TATTC CAGTGGAGCGCACTTG CATACTAT
ce6_ct_phastv6officialfilt2_chrI.1534 - 15 5.03e-11 AATTAT CAGTGGAGCGCACTTG CAAAGTTGAT
ce6_ct_phastv6officialfilt2_chrIV.2219 + 13 1.14e-10 ACCAAAAGTT CGGTGGAGCGCACTTG CACTAAACTT
ce6_ct_phastv6officialfilt2_chrII.11148 - 7 1.27e-10 CAGTGGAGCGCGGTTG CATTTCT
ce6_ct_phastv6officialfilt2_chrIII.1290 + 10 1.62e-10 GATGTTTGTT CGGTGGAGCGCGTTTG CACTGG
ce6_ct_phastv6officialfilt2_chrI.2918 + 2 1.62e-10 TT CGGTGGAGCGCGTTTG CTTTTAAA
ce6_ct_phastv6officialfilt2_chrIII.1106 + 8 1.89e-10 GAAGTGTG CAGTGGGGCGCGCTTG CATTCTGAA
ce6_ct_phastv6officialfilt2_chrIII.2478 + 22 2.34e-10 TCTAAATTGA CAATGGAGCGCACTTG CTACTA
ce6_ct_phastv6officialfilt2_chrII.1292 + 11 2.34e-10 AGCCAAATTT CAATGGAGCGCACTTG CAAAACCTCA
ce6_ct_phastv6officialfilt2_chrI.1171 - 7 2.34e-10 AACTTTTCT CAATGGAGCGCACTTG CTCTCTA
ce6_ct_phastv6officialfilt2_chrIII.14501 - 13 4.37e-10 CGCTCAGTC CACTGGAGCGCACTTG CTATTTTTGC
ce6_ct_phastv6officialfilt2_chrIV.2012 - 6 4.37e-10 GACATTTTAT CACTGGAGCGCACTTG CATCAT
ce6_ct_phastv6officialfilt2_chrX.9720 - 6 4.37e-10 CAGATTT CAATAGAGCGCGCTTG CGCGCA
ce6_ct_phastv6officialfilt2_chrI.14549 - 8 4.92e-10 GTA CAGTGGAGCGCAGTTG CATAACAA
ce6_ct_phastv6officialfilt2_chrI.3134 - 6 4.92e-10 TCTCATTTCT CCATGGAGCGCGCTTG CACCTT
ce6_ct_phastv6officialfilt2_chrII.4417 + 9 7.09e-10 CAAATTTCT CGATGGAGCGCGTTTG CATAGC
ce6_ct_phastv6officialfilt2_chrI.15654 + 18 7.09e-10 AAATTTGGTG CGATGGAGCGCGTTTG CACTGA
ce6_ct_phastv6officialfilt2_chrI.14943 - 14 7.09e-10 ACCATGAGTC CAGCGGAGCGCACTTG CACTATTTTT
ce6_ct_phastv6officialfilt2_chrI.2937 - 7 7.09e-10 AACTTGTGTG CAGTAGAGCGCGTTTG CTCATTT
ce6_ct_phastv6officialfilt2_chrIII.3150 + 11 1.14e-09 CAAGAATTGT CATTAGAGCGCGCTTG CTGACCT
ce6_ct_phastv6officialfilt2_chrIV.9729 + 8 1.14e-09 TAATCTCT CATTAGAGCGCGCTTG CGAAATTTC
ce6_ct_phastv6officialfilt2_chrV.14704 - 4 1.14e-09 TAAGTTTTAG CATTGGAGCGCGTTTG CAAC
ce6_ct_phastv6officialfilt2_chrI.14089 + 5 1.14e-09 ATCAT CATTGGAGCGCGTTTG CATCCAT
ce6_ct_phastv6officialfilt2_chrII.13134 + 8 1.40e-09 TAAAGTCT CAATGGAGCGCATTTG CATTGT
ce6_ct_phastv6officialfilt2_chrIII.1978 - 7 1.95e-09 CACTGGAGCGCATTTG CACCTTC
ce6_ct_phastv6officialfilt2_chrIV.6899 + 5 1.95e-09 CTTCT CAATAGAGCGCGTTTG CAGTCAATAT
ce6_ct_phastv6officialfilt2_chrIV.1615 - 6 1.95e-09 CCTAGATTAT CAGTAGAGCGCATTTG CCTCAA
ce6_ct_phastv6officialfilt2_chrI.408 + 10 1.95e-09 TGACGTTTGT CAATAGAGCGCGTTTG CATGTCAAAC
ce6_ct_phastv6officialfilt2_chrII.1288 + 9 2.19e-09 TCGATAGTT CAGTAGAGCGCAGTTG CAAATTTGG
ce6_ct_phastv6officialfilt2_chrI.15425 - 4 3.22e-09 CTATTTTTCT CATTAGAGCGCACTTG CAGC
ce6_ct_phastv6officialfilt2_chrV.3288 - 32 3.86e-09 T CACCAGAGCGCGCTTG CATTGTCATC
ce6_ct_phastv6officialfilt2_chrIV.1632 - 7 4.27e-09 CATCGGAGCGCACTTG CATCATG
ce6_ct_phastv6officialfilt2_chrI.14548 - 6 4.27e-09 CGTTAGAGCGCACTTG CTCCTG
ce6_ct_phastv6officialfilt2_chrI.14090 + 10 4.27e-09 ACCACATTCT CATTAGAGCGCGTTTG CAGCAA
ce6_ct_phastv6officialfilt2_chrIV.1943 - 8 4.93e-09 AAGAAACTAT CAATAGAGCGCATTTG CATAATCT
ce6_ct_phastv6officialfilt2_chrIII.1570 + 25 5.35e-09 TTCAGATTAT CCATAGAGCGCACTTG CACTTGG
ce6_ct_phastv6officialfilt2_chrI.842 + 5 8.43e-09 ATTCG CAATGGAGCGCGATTG CATATTTTGT
ce6_ct_phastv6officialfilt2_chrIV.3895 + 45 9.41e-09 TTACGGGGAG CGGTGGAGCGCACTTA CTCCTTAGAT
ce6_ct_phastv6officialfilt2_chrIII.6010 - 16 1.52e-08 CTATAGAGCGCGCTTG CCATTTGTCG
ce6_ct_phastv6officialfilt2_chrI.1326 + 5 3.22e-08 TTGTT CGGTAGAGCGCGTTTA CACT
ce6_ct_phastv6officialfilt2_chrIV.1950 + 9 7.08e-08 TGGTTTTCT CAATGGAGCGTATTTG CGCC
ce6_ct_phastv6officialfilt2_chrX.1327 + 34 2.57e-07 ATGGCAGGCA CGCGGCAGCGCGCGCG GGGACAGGCT
ce6_ct_phastv6officialfilt2_chrII.629 - 15 2.65e-06 G GCGCACGGCGCGGTCG CGTCGCGGTT
ce6_ct_phastv6officialfilt2_chrIV.1550 - 37 2.79e-06 GGCGGGCGCGCGGTTC CGCGTCCGCG
ce6_ct_phastv6officialfilt2_chrI.1 - 17 7.32e-06 CA CCGGTGGGCGGAGTCG CGGCGCACAC
ce6_ct_phastv6officialfilt2_chrII.647 + 2 1.27e-05 AT AGATGCGTCGCGGTCG CGTCGCGTTT
ce6_ct_phastv6officialfilt2_chrIV.16094 - 8 2.07e-05 CGACGAAAAG GGGGAGAGAGAGCGCG CACCACAT

Motif 2 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrV.13873 8.90e-12

+2
ce6_ct_phastv6officialfilt2_chrII.14005 5.03e-11

-2
ce6_ct_phastv6officialfilt2_chrII.4994 5.03e-11

+2
ce6_ct_phastv6officialfilt2_chrX.15414 5.03e-11

-2
ce6_ct_phastv6officialfilt2_chrI.1534 5.03e-11

-2
ce6_ct_phastv6officialfilt2_chrIV.2219 1.14e-10

+2
ce6_ct_phastv6officialfilt2_chrII.11148 1.27e-10

-2
ce6_ct_phastv6officialfilt2_chrIII.1290 1.62e-10

+2
ce6_ct_phastv6officialfilt2_chrI.2918 1.62e-10

+2
ce6_ct_phastv6officialfilt2_chrIII.1106 1.89e-10

+2
ce6_ct_phastv6officialfilt2_chrIII.2478 2.34e-10

+2
ce6_ct_phastv6officialfilt2_chrII.1292 2.34e-10

+2
ce6_ct_phastv6officialfilt2_chrI.1171 2.34e-10

-2
ce6_ct_phastv6officialfilt2_chrIII.14501 4.37e-10

-2
ce6_ct_phastv6officialfilt2_chrIV.2012 4.37e-10

-2
ce6_ct_phastv6officialfilt2_chrX.9720 4.37e-10

-2
ce6_ct_phastv6officialfilt2_chrI.14549 4.92e-10

-2
ce6_ct_phastv6officialfilt2_chrI.3134 4.92e-10

-2
ce6_ct_phastv6officialfilt2_chrII.4417 7.09e-10

+2
ce6_ct_phastv6officialfilt2_chrI.15654 7.09e-10

+2
ce6_ct_phastv6officialfilt2_chrI.14943 7.09e-10

-2
ce6_ct_phastv6officialfilt2_chrI.2937 7.09e-10

-2
ce6_ct_phastv6officialfilt2_chrIII.3150 1.14e-09

+2
ce6_ct_phastv6officialfilt2_chrIV.9729 1.14e-09

+2
ce6_ct_phastv6officialfilt2_chrV.14704 1.14e-09

-2
ce6_ct_phastv6officialfilt2_chrI.14089 1.14e-09

+2
ce6_ct_phastv6officialfilt2_chrII.13134 1.40e-09

+2
ce6_ct_phastv6officialfilt2_chrIII.1978 1.95e-09

-2
ce6_ct_phastv6officialfilt2_chrIV.6899 1.95e-09

+2
ce6_ct_phastv6officialfilt2_chrIV.1615 1.95e-09

-2
ce6_ct_phastv6officialfilt2_chrI.408 1.95e-09

+2
ce6_ct_phastv6officialfilt2_chrII.1288 2.19e-09

+2
ce6_ct_phastv6officialfilt2_chrI.15425 3.22e-09

-2
ce6_ct_phastv6officialfilt2_chrV.3288 3.86e-09

-2
ce6_ct_phastv6officialfilt2_chrIV.1632 4.27e-09

-2
ce6_ct_phastv6officialfilt2_chrI.14548 4.27e-09

-2
ce6_ct_phastv6officialfilt2_chrI.14090 4.27e-09

+2
ce6_ct_phastv6officialfilt2_chrIV.1943 4.93e-09

-2
ce6_ct_phastv6officialfilt2_chrIII.1570 5.35e-09

+2
ce6_ct_phastv6officialfilt2_chrI.842 8.43e-09

+2
ce6_ct_phastv6officialfilt2_chrIV.3895 9.41e-09

+2
ce6_ct_phastv6officialfilt2_chrIII.6010 1.52e-08

-2
ce6_ct_phastv6officialfilt2_chrI.1326 3.22e-08

+2
ce6_ct_phastv6officialfilt2_chrIV.1950 7.08e-08

+2
ce6_ct_phastv6officialfilt2_chrX.1327 2.57e-07

+2
ce6_ct_phastv6officialfilt2_chrII.629 2.65e-06

-2
ce6_ct_phastv6officialfilt2_chrIV.1550 2.79e-06

-2
ce6_ct_phastv6officialfilt2_chrI.1 7.32e-06

-2
ce6_ct_phastv6officialfilt2_chrII.647 1.27e-05

+2
ce6_ct_phastv6officialfilt2_chrIV.16094 2.07e-05

-2
SCALE
| | | | | | |
1 25 50 75 100 125

Motif 2 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 2 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 2 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 2 regular-expression

C[AG][GA]T[GA]GAGCGC[GA][CT]TTG

Time 6018.80 secs.

P N
MOTIF 3 width = 13 sites = 50 llr = 876 E-value = 9.9e-155

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
23.2 (bits)
Relative Entropy
25.3 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIII.12692 - 13 4.37e-09 GAAAATATTT TTGGTGGCCTAGA AAACTAAACT
ce6_ct_phastv6officialfilt2_chrIII.3164 + 16 4.37e-09 GAATGGAAAG TTGGTGGCCTAGA AAATTAGAAA
ce6_ct_phastv6officialfilt2_chrIII.1765 - 24 4.37e-09 TTTTTTCCAC TTGGTGGCCTAGA AATCCAAAAA
ce6_ct_phastv6officialfilt2_chrIII.1530 + 4 4.37e-09 CCGA TTGGTGGCCTAGA AACCGCA
ce6_ct_phastv6officialfilt2_chrIII.1375 - 17 4.37e-09 TTCGT TTGGTGGCCTAGA AACCCAAATT
ce6_ct_phastv6officialfilt2_chrIII.1169 + 5 4.37e-09 TCAGA TTGGTGGCCTAGA AATCCCAAAA
ce6_ct_phastv6officialfilt2_chrIII.951 + 1 4.37e-09 G TTGGTGGCCTAGA AAACCAAAAG
ce6_ct_phastv6officialfilt2_chrIV.2269 + 5 4.37e-09 AAAAA TTGGTGGCCTAGA AATCCAA
ce6_ct_phastv6officialfilt2_chrIV.2258 - 25 4.37e-09 AGTTTTCCAC TTGGTGGCCTAGA AATCCCAGAA
ce6_ct_phastv6officialfilt2_chrIV.2253 + 5 4.37e-09 TCCAC TTGGTGGCCTAGA AATCCAAAGG
ce6_ct_phastv6officialfilt2_chrIV.1946 + 1 4.37e-09 A TTGGTGGCCTAGA ACCCAATGTT
ce6_ct_phastv6officialfilt2_chrIV.1935 + 7 4.37e-09 TTTCAAG TTGGTGGCCTAGA AACAGCTAGG
ce6_ct_phastv6officialfilt2_chrIV.1933 + 6 4.37e-09 AGTTTT TTGGTGGCCTAGA AAAATCA
ce6_ct_phastv6officialfilt2_chrIV.1929 - 7 4.37e-09 A TTGGTGGCCTAGA AAACCAA
ce6_ct_phastv6officialfilt2_chrIV.1840 + 3 4.37e-09 AAG TTGGTGGCCTAGA AAACCAAAAT
ce6_ct_phastv6officialfilt2_chrIV.1839 - 12 4.37e-09 T TTGGTGGCCTAGA AATCCAAGTT
ce6_ct_phastv6officialfilt2_chrIV.1838 + 2 4.37e-09 AG TTGGTGGCCTAGA AACCTGG
ce6_ct_phastv6officialfilt2_chrIV.777 - 15 4.37e-09 CCAG TTGGTGGCCTAGA AATTCAAAAA
ce6_ct_phastv6officialfilt2_chrII.13980 + 5 4.37e-09 CTAGG TTGGTGGCCTAGA AATTTATATT
ce6_ct_phastv6officialfilt2_chrII.13929 + 9 4.37e-09 ATTTTCTAC TTGGTGGCCTAGA AAATACACGT
ce6_ct_phastv6officialfilt2_chrII.12775 - 14 4.37e-09 TCCTAGC TTGGTGGCCTAGA AACTTAAAAT
ce6_ct_phastv6officialfilt2_chrV.15356 + 6 4.37e-09 TTTCGG TTGGTGGCCTAGA AACCCAAAAC
ce6_ct_phastv6officialfilt2_chrV.15345 + 8 4.37e-09 ATTTAAAG TTGGTGGCCTAGA AAATCGGA
ce6_ct_phastv6officialfilt2_chrV.14462 - 21 4.37e-09 ATATTAAG TTGGTGGCCTAGA AGCCCAAAAC
ce6_ct_phastv6officialfilt2_chrV.14300 - 22 4.37e-09 CTCTAAAG TTGGTGGCCTAGA AACCCGAAAC
ce6_ct_phastv6officialfilt2_chrI.13344 + 4 4.37e-09 TAAG TTGGTGGCCTAGA AACCCCCTAG
ce6_ct_phastv6officialfilt2_chrI.13342 + 13 4.37e-09 AGTTTTCAAC TTGGTGGCCTAGA AACTTGA
ce6_ct_phastv6officialfilt2_chrI.13339 + 1 4.37e-09 T TTGGTGGCCTAGA ATTATA
ce6_ct_phastv6officialfilt2_chrI.13275 + 2 4.37e-09 TG TTGGTGGCCTAGA AATCCAAAAC
ce6_ct_phastv6officialfilt2_chrI.13272 - 4 4.37e-09 AAATAAGTT TTGGTGGCCTAGA AATC
ce6_ct_phastv6officialfilt2_chrI.2273 + 7 4.37e-09 GACATTT TTGGTGGCCTAGA AATGGAATTC
ce6_ct_phastv6officialfilt2_chrI.197 - 11 4.37e-09 TTAAAAAAAG TTGGTGGCCTAGA AACCCAAATT
ce6_ct_phastv6officialfilt2_chrIII.1233 + 3 8.55e-09 CTA GTGGTGGCCTAGA AACCCGATT
ce6_ct_phastv6officialfilt2_chrIV.2095 + 2 8.55e-09 AA TCGGTGGCCTAGA AATCCAT
ce6_ct_phastv6officialfilt2_chrX.41 - 8 8.55e-09 AAGG GTGGTGGCCTAGA AATTCAAA
ce6_ct_phastv6officialfilt2_chrI.2057 + 20 8.55e-09 AGAAAAGTTT TCGGTGGCCTAGA AAATTCA
ce6_ct_phastv6officialfilt2_chrIII.1382 - 8 1.27e-08 ACTTTTGCAC CTGGTGGCCTAGA AAATTGGA
ce6_ct_phastv6officialfilt2_chrIV.1945 + 1 1.27e-08 G CTGGTGGCCTAGA AACCCTTATT
ce6_ct_phastv6officialfilt2_chrIV.1934 + 5 1.92e-08 TCAAG TTGGTGGCCTAGG AATCCAAATT
ce6_ct_phastv6officialfilt2_chrII.14861 + 3 1.92e-08 AAG TTGGTGGCCTAGG AAAC
ce6_ct_phastv6officialfilt2_chrI.1206 - 7 2.36e-08 TAGGTGGCCTAGA AATGACA
ce6_ct_phastv6officialfilt2_chrIII.2260 + 5 3.00e-08 TTCGG TTGGTGGCCGAGA AAATGAG
ce6_ct_phastv6officialfilt2_chrI.713 + 3 3.30e-08 CAG GGGGTGGCCTAGA AAGCACAAAA
ce6_ct_phastv6officialfilt2_chrIV.1837 - 9 5.14e-08 C TTAGTGGCCTAGA AATCCAAGT
ce6_ct_phastv6officialfilt2_chrIV.1930 + 1 6.67e-08 A TTGATGGCCTAGA AACACAA
ce6_ct_phastv6officialfilt2_chrI.1826 + 3 6.67e-08 CAA TGCGTGGCCTAGA AATCCAAAGT
ce6_ct_phastv6officialfilt2_chrIV.778 + 2 7.30e-08 CA ACGGTGGCCTAGA AATCACAAAA
ce6_ct_phastv6officialfilt2_chrI.3075 + 3 7.95e-08 TAC TACGTGGCCTAGA AAACCTC
ce6_ct_phastv6officialfilt2_chrI.1827 + 1 7.95e-08 C TACGTGGCCTAGA AAACCTA
ce6_ct_phastv6officialfilt2_chrI.14095 + 2 9.00e-08 GG ATCGTGGCCTAGA AATACAAGTG

Motif 3 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIII.12692 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrIII.3164 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrIII.1765 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrIII.1530 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrIII.1375 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrIII.1169 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrIII.951 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrIV.2269 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrIV.2258 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrIV.2253 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrIV.1946 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrIV.1935 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrIV.1933 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrIV.1929 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrIV.1840 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrIV.1839 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrIV.1838 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrIV.777 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrII.13980 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrII.13929 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrII.12775 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrV.15356 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrV.15345 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrV.14462 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrV.14300 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrI.13344 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrI.13342 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrI.13339 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrI.13275 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrI.13272 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrI.2273 4.37e-09

+3
ce6_ct_phastv6officialfilt2_chrI.197 4.37e-09

-3
ce6_ct_phastv6officialfilt2_chrIII.1233 8.55e-09

+3
ce6_ct_phastv6officialfilt2_chrIV.2095 8.55e-09

+3
ce6_ct_phastv6officialfilt2_chrX.41 8.55e-09

-3
ce6_ct_phastv6officialfilt2_chrI.2057 8.55e-09

+3
ce6_ct_phastv6officialfilt2_chrIII.1382 1.27e-08

-3
ce6_ct_phastv6officialfilt2_chrIV.1945 1.27e-08

+3
ce6_ct_phastv6officialfilt2_chrIV.1934 1.92e-08

+3
ce6_ct_phastv6officialfilt2_chrII.14861 1.92e-08

+3
ce6_ct_phastv6officialfilt2_chrI.1206 2.36e-08

-3
ce6_ct_phastv6officialfilt2_chrIII.2260 3.00e-08

+3
ce6_ct_phastv6officialfilt2_chrI.713 3.30e-08

+3
ce6_ct_phastv6officialfilt2_chrIV.1837 5.14e-08

-3
ce6_ct_phastv6officialfilt2_chrIV.1930 6.67e-08

+3
ce6_ct_phastv6officialfilt2_chrI.1826 6.67e-08

+3
ce6_ct_phastv6officialfilt2_chrIV.778 7.30e-08

+3
ce6_ct_phastv6officialfilt2_chrI.3075 7.95e-08

+3
ce6_ct_phastv6officialfilt2_chrI.1827 7.95e-08

+3
ce6_ct_phastv6officialfilt2_chrI.14095 9.00e-08

+3
SCALE
| | |
1 25 50

Motif 3 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 3 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 3 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 3 regular-expression

TTGGTGGCCTAGA

Time 9061.22 secs.

P N
MOTIF 4 width = 15 sites = 50 llr = 822 E-value = 6.5e-127

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
18.9 (bits)
Relative Entropy
23.7 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIV.2002 + 5 2.15e-10 CCACT TTGGGTCCCGCCACG AAAGTCCGCA
ce6_ct_phastv6officialfilt2_chrIV.1424 + 6 2.15e-10 AAGCTT TTGGGTCCCGCCACG AAATA
ce6_ct_phastv6officialfilt2_chrII.14095 - 6 2.15e-10 TTAATT TTGGGTCCCGCCACG ACTTTC
ce6_ct_phastv6officialfilt2_chrIII.1320 + 5 1.06e-09 AATAT TTAGGTCCCGCCGCG AATTCTTGGG
ce6_ct_phastv6officialfilt2_chrIII.13008 + 27 2.27e-09 CGCCATTTCT TTGGGTCTCGCCACG ATCTCAG
ce6_ct_phastv6officialfilt2_chrIV.11548 + 6 2.27e-09 TGTTAG TTGGGTCTCGCCACG ATTGCT
ce6_ct_phastv6officialfilt2_chrIV.3135 - 18 2.27e-09 TCGAGTTTTT TTGGGTCTCGCCACG AAAACAATCA
ce6_ct_phastv6officialfilt2_chrIV.1425 + 10 2.27e-09 AATTTTTTTT TTGGGTCTCGCCACG AAAATCCAAA
ce6_ct_phastv6officialfilt2_chrI.13699 + 8 2.27e-09 TAGAGTTT TTGGGTCTCGCCACG AAATAATTTC
ce6_ct_phastv6officialfilt2_chrI.2864 - 12 2.77e-09 ACGAGAAAAA TCAGGTCCCGCCACG ATTTTCTAGA
ce6_ct_phastv6officialfilt2_chrIV.15805 - 8 4.16e-09 AATAATTT TCAGGCTCCGCCCCC TTTAATGG
ce6_ct_phastv6officialfilt2_chrIV.2670 - 5 4.16e-09 TTCTGAAATT ATGGGTCCCGCCACG ATAAA
ce6_ct_phastv6officialfilt2_chrIV.2667 - 6 5.59e-09 GAC TCGGGTCTCGCCGCG AACAGA
ce6_ct_phastv6officialfilt2_chrV.818 + 3 5.59e-09 TCA TCGGGTCTCGCCACG AAATCA
ce6_ct_phastv6officialfilt2_chrI.14329 - 7 6.18e-09 CAA GTGGGTCTCGCCACG AACTCAG
ce6_ct_phastv6officialfilt2_chrI.11497 + 4 6.18e-09 CCAT GTGGGTCTCGCCACG AAATTGTCA
ce6_ct_phastv6officialfilt2_chrIII.2653 + 5 7.87e-09 TTAAG TTAGGCTCCGCCCAC TTTTTAGGC
ce6_ct_phastv6officialfilt2_chrIII.989 + 4 7.87e-09 CAAA TTAGGCTCCGCCCAC TTTTAGAAAA
ce6_ct_phastv6officialfilt2_chrIV.15812 + 7 7.87e-09 AAACCTT TTAGGCTCCGCCCAC TTCCTGG
ce6_ct_phastv6officialfilt2_chrIV.38 - 10 7.87e-09 AGGATGAT TTAGGCTCCGCCCAC TTTTTCTGCA
ce6_ct_phastv6officialfilt2_chrII.13591 + 8 7.87e-09 TCCAAATT TTAGGCTCCGCCCAC TTATTGGCTT
ce6_ct_phastv6officialfilt2_chrII.13313 + 6 7.87e-09 ACAAAA TTAGGCTCCGCCCAC ATTTTGGTAG
ce6_ct_phastv6officialfilt2_chrV.1722 - 11 7.87e-09 TGAGATG TTAGGCTCCGCCCAC TTTTTGGATA
ce6_ct_phastv6officialfilt2_chrI.14121 + 1 7.87e-09 A TTAGGCTCCGCCCAC TTTCAATTTC
ce6_ct_phastv6officialfilt2_chrIII.14225 + 8 1.13e-08 TTGCGAAA TTAGGCTCCGCCCCT TTTTCCGTGC
ce6_ct_phastv6officialfilt2_chrIII.13993 + 10 1.13e-08 CACACAAAAA TTAGGCCCCGCCCAT TTCTTGGCTA
ce6_ct_phastv6officialfilt2_chrIII.8324 + 44 1.24e-08 GTAGTCAGAC GCGGGTCTCGCCGCG ACGAGGCATT
ce6_ct_phastv6officialfilt2_chrIV.14221 + 20 1.24e-08 TCTCTCCGTA GCGGGTCTCGCCACG ACTGCA
ce6_ct_phastv6officialfilt2_chrII.14096 - 41 1.24e-08 ACAAAGTGTG GCGGGTCTCGCCGCG ATTAACTAAA
ce6_ct_phastv6officialfilt2_chrX.13 - 7 1.24e-08 ACT GCGGGTCTCGCCACG AAAACAT
ce6_ct_phastv6officialfilt2_chrIII.2908 + 2 1.89e-08 CG ATGGGTCTCGCCACG ATACGCAATC
ce6_ct_phastv6officialfilt2_chrI.1088 - 6 1.89e-08 G ATGGGTCTCGCCGCG ATCTTG
ce6_ct_phastv6officialfilt2_chrIII.13991 - 9 3.25e-08 ACAAAAA TTAGGCTCCGCCCAT TTCTTGGCT
ce6_ct_phastv6officialfilt2_chrIV.15807 - 7 3.25e-08 TTTTGAAAAT TTAGGCTCCGCCCAT TTCCTGG
ce6_ct_phastv6officialfilt2_chrII.13312 + 8 3.25e-08 ACTGCAAA TTAGGCTCCGCCCAT TTTCGATGAA
ce6_ct_phastv6officialfilt2_chrIII.4282 + 5 3.83e-08 TACAC CTAGGCTCCGCCCAC TTTTTGCCTG
ce6_ct_phastv6officialfilt2_chrIV.1209 + 3 3.83e-08 TAT CTAGGCTCCGCCCAC TTTTT
ce6_ct_phastv6officialfilt2_chrII.2029 - 20 3.83e-08 CGCC CTAGGCTCCGCCCAC TTTTGGAAAT
ce6_ct_phastv6officialfilt2_chrIII.1278 - 6 4.19e-08 TGGATTTTTT TCGGGTCCCGCAACG AATTTT
ce6_ct_phastv6officialfilt2_chrIV.53 + 10 4.19e-08 AAACCTCCGG ATAGGCTCCGCCCAC TTCTTGG
ce6_ct_phastv6officialfilt2_chrIV.161 - 1 4.85e-08 TCATTTTGTG TGGGGTCTCGCCACG A
ce6_ct_phastv6officialfilt2_chrI.13234 + 0 5.62e-08 GTAGGCTCCGCCCAT TTTTGTACC
ce6_ct_phastv6officialfilt2_chrIV.15823 - 14 6.09e-08 TGCAG TTAGGCTCCGCCCCA CTTTCTGTGC
ce6_ct_phastv6officialfilt2_chrIII.13074 - 29 6.53e-08 TT TTGGGTCCCGACGCG AAAATCGGGG
ce6_ct_phastv6officialfilt2_chrIV.2003 + 6 6.53e-08 AAATTT TTGGGTCCCACCGCG AAACACTACA
ce6_ct_phastv6officialfilt2_chrI.12254 + 1 6.92e-08 G TTGGGTCTCGCAGCG CGGGAG
ce6_ct_phastv6officialfilt2_chrIV.5126 + 2 1.06e-07 GC TCGGGTCTCGCAGCG ACCTGCTGAC
ce6_ct_phastv6officialfilt2_chrI.13235 + 4 1.12e-07 ATGT ATAGGCTCCGCCCAT TTCTTGGGTT
ce6_ct_phastv6officialfilt2_chrI.15726 + 11 1.28e-07 CTTCTAAAAA ATCGGCTCCGCCCAC TTCT
ce6_ct_phastv6officialfilt2_chrX.2874 - 2 1.44e-07 CCGAATTCGG GTCGGCCCCGCCCTG TT

Motif 4 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIV.2002 2.15e-10

+4
ce6_ct_phastv6officialfilt2_chrIV.1424 2.15e-10

+4
ce6_ct_phastv6officialfilt2_chrII.14095 2.15e-10

-4
ce6_ct_phastv6officialfilt2_chrIII.1320 1.06e-09

+4
ce6_ct_phastv6officialfilt2_chrIII.13008 2.27e-09

+4
ce6_ct_phastv6officialfilt2_chrIV.11548 2.27e-09

+4
ce6_ct_phastv6officialfilt2_chrIV.3135 2.27e-09

-4
ce6_ct_phastv6officialfilt2_chrIV.1425 2.27e-09

+4
ce6_ct_phastv6officialfilt2_chrI.13699 2.27e-09

+4
ce6_ct_phastv6officialfilt2_chrI.2864 2.77e-09

-4
ce6_ct_phastv6officialfilt2_chrIV.15805 4.16e-09

-4
ce6_ct_phastv6officialfilt2_chrIV.2670 4.16e-09

-4
ce6_ct_phastv6officialfilt2_chrIV.2667 5.59e-09

-4
ce6_ct_phastv6officialfilt2_chrV.818 5.59e-09

+4
ce6_ct_phastv6officialfilt2_chrI.14329 6.18e-09

-4
ce6_ct_phastv6officialfilt2_chrI.11497 6.18e-09

+4
ce6_ct_phastv6officialfilt2_chrIII.2653 7.87e-09

+4
ce6_ct_phastv6officialfilt2_chrIII.989 7.87e-09

+4
ce6_ct_phastv6officialfilt2_chrIV.15812 7.87e-09

+4
ce6_ct_phastv6officialfilt2_chrIV.38 7.87e-09

-4
ce6_ct_phastv6officialfilt2_chrII.13591 7.87e-09

+4
ce6_ct_phastv6officialfilt2_chrII.13313 7.87e-09

+4
ce6_ct_phastv6officialfilt2_chrV.1722 7.87e-09

-4
ce6_ct_phastv6officialfilt2_chrI.14121 7.87e-09

+4
ce6_ct_phastv6officialfilt2_chrIII.14225 1.13e-08

+4
ce6_ct_phastv6officialfilt2_chrIII.13993 1.13e-08

+4
ce6_ct_phastv6officialfilt2_chrIII.8324 1.24e-08

+4
ce6_ct_phastv6officialfilt2_chrIV.14221 1.24e-08

+4
ce6_ct_phastv6officialfilt2_chrII.14096 1.24e-08

-4
ce6_ct_phastv6officialfilt2_chrX.13 1.24e-08

-4
ce6_ct_phastv6officialfilt2_chrIII.2908 1.89e-08

+4
ce6_ct_phastv6officialfilt2_chrI.1088 1.89e-08

-4
ce6_ct_phastv6officialfilt2_chrIII.13991 3.25e-08

-4
ce6_ct_phastv6officialfilt2_chrIV.15807 3.25e-08

-4
ce6_ct_phastv6officialfilt2_chrII.13312 3.25e-08

+4
ce6_ct_phastv6officialfilt2_chrIII.4282 3.83e-08

+4
ce6_ct_phastv6officialfilt2_chrIV.1209 3.83e-08

+4
ce6_ct_phastv6officialfilt2_chrII.2029 3.83e-08

-4
ce6_ct_phastv6officialfilt2_chrIII.1278 4.19e-08

-4
ce6_ct_phastv6officialfilt2_chrIV.53 4.19e-08

+4
ce6_ct_phastv6officialfilt2_chrIV.161 4.85e-08

-4
ce6_ct_phastv6officialfilt2_chrI.13234 5.62e-08

+4
ce6_ct_phastv6officialfilt2_chrIV.15823 6.09e-08

-4
ce6_ct_phastv6officialfilt2_chrIII.13074 6.53e-08

-4
ce6_ct_phastv6officialfilt2_chrIV.2003 6.53e-08

+4
ce6_ct_phastv6officialfilt2_chrI.12254 6.92e-08

+4
ce6_ct_phastv6officialfilt2_chrIV.5126 1.06e-07

+4
ce6_ct_phastv6officialfilt2_chrI.13235 1.12e-07

+4
ce6_ct_phastv6officialfilt2_chrI.15726 1.28e-07

+4
ce6_ct_phastv6officialfilt2_chrX.2874 1.44e-07

-4
SCALE
| | | |
1 25 50 75

Motif 4 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 4 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 4 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 4 regular-expression

T[TC][GA]GG[TC][CT][CT]CGCC[CA][CA][GC]

Time 12096.55 secs.

P N
MOTIF 5 width = 15 sites = 50 llr = 714 E-value = 3.0e-080

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
17.5 (bits)
Relative Entropy
20.6 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIII.13077 + 14 9.17e-10 TGTCTGTCGT CTCTCTCTCTCTCTC T
ce6_ct_phastv6officialfilt2_chrIII.3939 - 3 9.17e-10 TGTTT CTCTCTCTCTCTCTC GAT
ce6_ct_phastv6officialfilt2_chrIII.2651 + 11 9.17e-10 CATCTCTTTT CTCTCTCTCTCTCTC ACGC
ce6_ct_phastv6officialfilt2_chrIV.4706 - 11 9.17e-10 ATA CTCTCTCTCTCTCTC TGTGTCGTTT
ce6_ct_phastv6officialfilt2_chrIV.3624 + 13 9.17e-10 CTTCTCCAGT CTCTCTCTCTCTCTC TCCATCT
ce6_ct_phastv6officialfilt2_chrIV.2646 - 3 9.17e-10 TTGTAGTCCT CTCTCTCTCTCTCTC TGG
ce6_ct_phastv6officialfilt2_chrII.1912 - 13 9.17e-10 CACACACACA CTCTCTCTCTCTCTC TCCGCTCACA
ce6_ct_phastv6officialfilt2_chrV.14232 + 21 9.17e-10 TGTCTGGGCT CTCTCTCTCTCTCTC ACT
ce6_ct_phastv6officialfilt2_chrV.7235 - 6 9.17e-10 TAAGCTTTCT CTCTCTCTCTCTCTC TTCCAT
ce6_ct_phastv6officialfilt2_chrV.864 - 7 9.17e-10 AAAACT CTCTCTCTCTCTCTC TCGAAAA
ce6_ct_phastv6officialfilt2_chrI.5286 + 13 9.17e-10 AATGTCTGCA CTCTCTCTCTCTCTC TCTATACC
ce6_ct_phastv6officialfilt2_chrX.5434 - 21 1.76e-09 CCCTCTCTCTCTCTC TCTCTTCCAC
ce6_ct_phastv6officialfilt2_chrIV.15497 + 1 2.69e-09 T CTCCCTCTCTCTCTC TTTCCTCTCA
ce6_ct_phastv6officialfilt2_chrIV.5473 + 2 1.75e-08 CC TTCTCTCTGCGTCTC CTCAT
ce6_ct_phastv6officialfilt2_chrIII.7048 - 9 2.07e-08 AGGGCAACTT TTCTCTCTCTCTCTC ACTCTATCA
ce6_ct_phastv6officialfilt2_chrII.4307 - 34 2.07e-08 CTT TTCTCTCTCTCTCTC TTTCAAAAGT
ce6_ct_phastv6officialfilt2_chrI.5385 + 5 2.07e-08 CCTTC TTCTCTCTCTCTCTC T
ce6_ct_phastv6officialfilt2_chrX.9814 - 35 3.07e-08 TATCTCT CTCTCTCTTTCTCTC GCCTCTTTTT
ce6_ct_phastv6officialfilt2_chrIII.8913 - 0 4.44e-08 ACTCTCTCTG CTCTCTCCTCGTCTC
ce6_ct_phastv6officialfilt2_chrIV.14752 - 0 4.44e-08 CCTTCAGGTG CTCTCTCGCCGTCTC
ce6_ct_phastv6officialfilt2_chrIII.15386 + 9 9.36e-08 CCGATCTCC CTCTCTCTCTGGCTC
ce6_ct_phastv6officialfilt2_chrV.14731 + 1 9.36e-08 T CACTGTCTGCGTCTC TTTTCT
ce6_ct_phastv6officialfilt2_chrIV.1563 + 4 1.02e-07 TATC CCTCCTCTCTGTCTC TAACTGTCTG
ce6_ct_phastv6officialfilt2_chrII.12438 + 4 1.14e-07 CCAA GTTTCTCTGCGTCTC CACGGCTT
ce6_ct_phastv6officialfilt2_chrV.2218 - 5 1.14e-07 AGAGGATCTG GTTTCTCTGCGTCTC CTTTT
ce6_ct_phastv6officialfilt2_chrI.13925 + 6 1.14e-07 AGCCGT GTTTCTCTGCGTCTC CACCT
ce6_ct_phastv6officialfilt2_chrI.13395 + 21 1.14e-07 GGTTTTCTCT GGCCCTCTGCGTCTC TTCTATTTC
ce6_ct_phastv6officialfilt2_chrIII.13864 + 28 1.58e-07 CACACTGTTT CACCGTCTGCGTCTC CACAAATCAC
ce6_ct_phastv6officialfilt2_chrIII.6037 - 9 1.58e-07 TGTACT CTCTCTATCTCTCTC ACACACACA
ce6_ct_phastv6officialfilt2_chrII.13027 - 1 1.58e-07 CTC CTCGCTCCGCCTCCC C
ce6_ct_phastv6officialfilt2_chrIV.2417 + 2 2.12e-07 AA CTATCTCTGCGTCTC TAATCC
ce6_ct_phastv6officialfilt2_chrI.13529 + 4 2.57e-07 CACA TTTTCTCTGCGTCTC T
ce6_ct_phastv6officialfilt2_chrIV.9138 - 5 2.84e-07 GATTCTCTAG GACTGTCTGCGTCTC TGATT
ce6_ct_phastv6officialfilt2_chrII.10055 + 22 2.84e-07 TCGTTTCGTT CTCCCCCTTTCTCTC TCTATCTCTT
ce6_ct_phastv6officialfilt2_chrIII.10639 - 8 3.38e-07 ATCTGT GCGTCTCTTCGTCTC ACATACTA
ce6_ct_phastv6officialfilt2_chrIV.5406 + 10 3.38e-07 CGCGTTTGCA TTGTGTCTCCGTCTC CATAA
ce6_ct_phastv6officialfilt2_chrV.687 - 4 3.67e-07 AAA CCGTCTGCGTCTCTC ATTC
ce6_ct_phastv6officialfilt2_chrV.15065 - 6 3.98e-07 TTA ACGTCTCTGCGTCTC TTTTTT
ce6_ct_phastv6officialfilt2_chrV.8744 + 53 4.34e-07 TAGGTCGTGT CCGTCTGTCCGTCCC TTTTG
ce6_ct_phastv6officialfilt2_chrIII.8721 - 25 4.70e-07 TCTCCTCTGCGTCTC TTCATCTTGT
ce6_ct_phastv6officialfilt2_chrIII.14088 - 23 5.08e-07 CTTA TTCTCTGCGTCTCTC AAATCCCACA
ce6_ct_phastv6officialfilt2_chrV.5704 - 12 5.08e-07 GAAGTTATCT GCGTCTCTTTGTCTC GCACACTCTC
ce6_ct_phastv6officialfilt2_chrIV.3669 + 42 1.11e-06 CCGATTCAAA CCCCCCCCCCCCCCC CC
ce6_ct_phastv6officialfilt2_chrX.7940 + 3 1.11e-06 GTT CCCCCCCCCCCCCCC CCCCAAAATG
ce6_ct_phastv6officialfilt2_chrIII.442 - 24 1.19e-06 GAA CAGTCTGCGTCTCTC CGGCATTCCA
ce6_ct_phastv6officialfilt2_chrV.7461 + 4 1.47e-06 TTTG TAGTGTCTGCGTCTC ATGTATTATT
ce6_ct_phastv6officialfilt2_chrV.8452 + 35 2.04e-06 TCCGATTTGT GCCCCTACCCCTCCC TTTTTCTTTT
ce6_ct_phastv6officialfilt2_chrIII.1119 - 19 2.94e-06 CAGAACGAC GGCCGCCCGTCTCTC CGACGGGCAG
ce6_ct_phastv6officialfilt2_chrV.1283 - 15 8.41e-06 TT GTCGGGCTGTCTCGC GCACCAAAAT
ce6_ct_phastv6officialfilt2_chrIV.2307 + 9 2.21e-05 GGGTGTGCG ACGCGGCCGCGTCGC GGTCTAC

Motif 5 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIII.13077 9.17e-10

+5
ce6_ct_phastv6officialfilt2_chrIII.3939 9.17e-10

-5
ce6_ct_phastv6officialfilt2_chrIII.2651 9.17e-10

+5
ce6_ct_phastv6officialfilt2_chrIV.4706 9.17e-10

-5
ce6_ct_phastv6officialfilt2_chrIV.3624 9.17e-10

+5
ce6_ct_phastv6officialfilt2_chrIV.2646 9.17e-10

-5
ce6_ct_phastv6officialfilt2_chrII.1912 9.17e-10

-5
ce6_ct_phastv6officialfilt2_chrV.14232 9.17e-10

+5
ce6_ct_phastv6officialfilt2_chrV.7235 9.17e-10

-5
ce6_ct_phastv6officialfilt2_chrV.864 9.17e-10

-5
ce6_ct_phastv6officialfilt2_chrI.5286 9.17e-10

+5
ce6_ct_phastv6officialfilt2_chrX.5434 1.76e-09

-5
ce6_ct_phastv6officialfilt2_chrIV.15497 2.69e-09

+5
ce6_ct_phastv6officialfilt2_chrIV.5473 1.75e-08

+5
ce6_ct_phastv6officialfilt2_chrIII.7048 2.07e-08

-5
ce6_ct_phastv6officialfilt2_chrII.4307 2.07e-08

-5
ce6_ct_phastv6officialfilt2_chrI.5385 2.07e-08

+5
ce6_ct_phastv6officialfilt2_chrX.9814 3.07e-08

-5
ce6_ct_phastv6officialfilt2_chrIII.8913 4.44e-08

-5
ce6_ct_phastv6officialfilt2_chrIV.14752 4.44e-08

-5
ce6_ct_phastv6officialfilt2_chrIII.15386 9.36e-08

+5
ce6_ct_phastv6officialfilt2_chrV.14731 9.36e-08

+5
ce6_ct_phastv6officialfilt2_chrIV.1563 1.02e-07

+5
ce6_ct_phastv6officialfilt2_chrII.12438 1.14e-07

+5
ce6_ct_phastv6officialfilt2_chrV.2218 1.14e-07

-5
ce6_ct_phastv6officialfilt2_chrI.13925 1.14e-07

+5
ce6_ct_phastv6officialfilt2_chrI.13395 1.14e-07

+5
ce6_ct_phastv6officialfilt2_chrIII.13864 1.58e-07

+5
ce6_ct_phastv6officialfilt2_chrIII.6037 1.58e-07

-5
ce6_ct_phastv6officialfilt2_chrII.13027 1.58e-07

-5
ce6_ct_phastv6officialfilt2_chrIV.2417 2.12e-07

+5
ce6_ct_phastv6officialfilt2_chrI.13529 2.57e-07

+5
ce6_ct_phastv6officialfilt2_chrIV.9138 2.84e-07

-5
ce6_ct_phastv6officialfilt2_chrII.10055 2.84e-07

+5
ce6_ct_phastv6officialfilt2_chrIII.10639 3.38e-07

-5
ce6_ct_phastv6officialfilt2_chrIV.5406 3.38e-07

+5
ce6_ct_phastv6officialfilt2_chrV.687 3.67e-07

-5
ce6_ct_phastv6officialfilt2_chrV.15065 3.98e-07

-5
ce6_ct_phastv6officialfilt2_chrV.8744 4.34e-07

+5
ce6_ct_phastv6officialfilt2_chrIII.8721 4.70e-07

-5
ce6_ct_phastv6officialfilt2_chrIII.14088 5.08e-07

-5
ce6_ct_phastv6officialfilt2_chrV.5704 5.08e-07

-5
ce6_ct_phastv6officialfilt2_chrIV.3669 1.11e-06

+5
ce6_ct_phastv6officialfilt2_chrX.7940 1.11e-06

+5
ce6_ct_phastv6officialfilt2_chrIII.442 1.19e-06

-5
ce6_ct_phastv6officialfilt2_chrV.7461 1.47e-06

+5
ce6_ct_phastv6officialfilt2_chrV.8452 2.04e-06

+5
ce6_ct_phastv6officialfilt2_chrIII.1119 2.94e-06

-5
ce6_ct_phastv6officialfilt2_chrV.1283 8.41e-06

-5
ce6_ct_phastv6officialfilt2_chrIV.2307 2.21e-05

+5
SCALE
| | | |
1 25 50 75

Motif 5 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 5 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 5 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 5 regular-expression

[CG][TC]C[TC]CTC[TC][CG][TC][CG]TCTC

Time 14878.80 secs.

P N
MOTIF 6 width = 11 sites = 49 llr = 644 E-value = 2.7e-062

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
14.2 (bits)
Relative Entropy
19.0 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrX.11152 + 5 1.92e-08 AACAA GCTCCGCCCAC AAGTTCTCCA
ce6_ct_phastv6officialfilt2_chrX.1495 + 0 1.92e-08 GCTCCGCCCAC TACACACACA
ce6_ct_phastv6officialfilt2_chrV.14313 - 8 1.92e-08 ATAAGAACAA GCTCCGCCCAC TTTTTTCG
ce6_ct_phastv6officialfilt2_chrI.14121 + 27 1.92e-08 TTCAATTTCA GCTCCGCCCAC TTTTGGTCCT
ce6_ct_phastv6officialfilt2_chrI.8272 - 9 1.92e-08 ACAAGTCGAA GCTCCGCCCAC TTTTTTCCT
ce6_ct_phastv6officialfilt2_chrIV.1549 - 11 3.17e-08 ATTG GCCCCGCCCAC GCTTTTCGAA
ce6_ct_phastv6officialfilt2_chrIII.15032 - 9 5.76e-08 GCAAAATTAA GCTCCGCCCCT TTTTCTGTG
ce6_ct_phastv6officialfilt2_chrIII.987 - 4 5.76e-08 GAAATTTTAA GCTCCGCCCCT TTTC
ce6_ct_phastv6officialfilt2_chrI.7824 + 4 5.76e-08 TATT GCTCCGCCCCT CCGTCACATT
ce6_ct_phastv6officialfilt2_chrIII.13562 + 5 9.97e-08 AACAA GCTCCGCCCAT TTCTTGG
ce6_ct_phastv6officialfilt2_chrIV.15806 - 3 9.97e-08 AAGAATTTAA GCTCCGCCCAT TTC
ce6_ct_phastv6officialfilt2_chrIV.8159 + 4 9.97e-08 CAAC GCTCCGCCCAT TTCCTCC
ce6_ct_phastv6officialfilt2_chrIV.6868 + 11 9.97e-08 ACTGAAATAG GCTCCGCCCAT TTCTTGG
ce6_ct_phastv6officialfilt2_chrII.15088 + 16 9.97e-08 GTCCAAATAA GCTCCGCCCAT TTCATCC
ce6_ct_phastv6officialfilt2_chrII.14805 - 5 9.97e-08 AGGAAATTAT GCTCCGCCCAT ATTCT
ce6_ct_phastv6officialfilt2_chrX.12497 + 16 9.97e-08 TGCGCCTGCT GCTCCGCCCAT CTTTCCATTT
ce6_ct_phastv6officialfilt2_chrX.7827 - 9 9.97e-08 TGGCTGACAA GCTCCGCCCAT TGTCATAGA
ce6_ct_phastv6officialfilt2_chrIV.15987 + 13 1.54e-07 TTAAAAATAA GCCCCGCCCCT TTTTTGCAAA
ce6_ct_phastv6officialfilt2_chrV.9493 - 13 2.04e-07 TTCATG ACTCCGCCCCC GTATCATTAG
ce6_ct_phastv6officialfilt2_chrI.2421 - 8 2.04e-07 TTAAAAATAG ACTCCGCCCCC TTTTTGCA
ce6_ct_phastv6officialfilt2_chrIII.7339 - 9 2.59e-07 TGTGCAGCGT GCGACGCGCCC CGCCTATCT
ce6_ct_phastv6officialfilt2_chrIII.13046 - 7 3.20e-07 GCAG GCCACGCCCAC TTATTGG
ce6_ct_phastv6officialfilt2_chrIII.8128 + 8 3.20e-07 CCTTCTAG GCCACGCCCAC TTTTTTGT
ce6_ct_phastv6officialfilt2_chrI.13145 + 6 3.20e-07 GTTAAG GCCACGCCCAC TTTTTTTTTT
ce6_ct_phastv6officialfilt2_chrII.4800 - 15 3.67e-07 A GCTCCGCCCAG TTTTTTGGAG
ce6_ct_phastv6officialfilt2_chrV.9976 - 4 3.67e-07 GATCGAAG ACTCCGCCCAC TATT
ce6_ct_phastv6officialfilt2_chrV.9629 + 11 3.67e-07 GTCGTGGGAA ACTCCGCCCAC TTT
ce6_ct_phastv6officialfilt2_chrII.12515 - 12 4.64e-07 AAAAAAAACC GCGCCGCGACC GCATTGCGCT
ce6_ct_phastv6officialfilt2_chrII.6260 + 61 4.64e-07 GTGCCGAGAA GCGACGCCCCT TGTCTCCTCA
ce6_ct_phastv6officialfilt2_chrV.5602 - 8 4.64e-07 AACAC GCGCCGCCGAC ACTCCACG
ce6_ct_phastv6officialfilt2_chrI.11433 - 3 4.64e-07 CGCGAAAACC GCGACGCGCAC ACA
ce6_ct_phastv6officialfilt2_chrX.13729 + 4 4.87e-07 GTTG CCCCCGCCCAC TTTGTGTTCT
ce6_ct_phastv6officialfilt2_chrIII.984 + 26 5.29e-07 CCATTCCTAG GCTCCGCCTAC TT
ce6_ct_phastv6officialfilt2_chrII.9622 - 16 5.29e-07 TCTAA GCTCCGCCTAC TTTTTTGGAC
ce6_ct_phastv6officialfilt2_chrII.3039 - 19 5.29e-07 GAATTTCCAA GCTCCGCCTAC GAATCCGTGC
ce6_ct_phastv6officialfilt2_chrIII.916 - 8 7.36e-07 CACGTCTAG GCTCCACCCAC TTTTGGGT
ce6_ct_phastv6officialfilt2_chrIV.1693 + 2 7.74e-07 CG GCTCCCCGCCC ACTTTTCCGT
ce6_ct_phastv6officialfilt2_chrI.13309 + 1 9.39e-07 C ACTCCGCCCCT TTTCTCTATT
ce6_ct_phastv6officialfilt2_chrIII.7042 + 32 1.08e-06 AATCCAATTG GCGCCACGCCC AC
ce6_ct_phastv6officialfilt2_chrIII.8238 - 8 2.10e-06 ACGACC GCGACGCGACC GCTACGCA
ce6_ct_phastv6officialfilt2_chrIV.15624 - 23 2.10e-06 TGTGGCC GCGACGCGACC GCAACGCGAC
ce6_ct_phastv6officialfilt2_chrIV.2280 - 19 2.10e-06 ACAATC GCGACGCGACC GCAACGCGTC
ce6_ct_phastv6officialfilt2_chrII.1689 - 32 2.10e-06 ACC GCGACGCGACC GCAGCGCTCC
ce6_ct_phastv6officialfilt2_chrI.15443 + 7 2.10e-06 CTTGGCC GCGACGCGACC GCAACGCATT
ce6_ct_phastv6officialfilt2_chrI.2609 + 11 2.10e-06 CACCCTGGCC GCTACGCGACC GCAACGCGTG
ce6_ct_phastv6officialfilt2_chrX.12745 - 9 2.79e-06 GAGATGCGCG CCTCCACCCCC AGGTCTCCA
ce6_ct_phastv6officialfilt2_chrIV.822 - 2 3.56e-06 GAGGTGTCGG CCGCCGCGCCG AC
ce6_ct_phastv6officialfilt2_chrX.1496 - 9 4.02e-06 ACTT CCGCCGCGGCC GACACTTCA
ce6_ct_phastv6officialfilt2_chrIII.2276 - 7 9.21e-06 CAA GCGCGCCCCAC TGGACAT

Motif 6 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrX.11152 1.92e-08

+6
ce6_ct_phastv6officialfilt2_chrX.1495 1.92e-08

+6
ce6_ct_phastv6officialfilt2_chrV.14313 1.92e-08

-6
ce6_ct_phastv6officialfilt2_chrI.14121 1.92e-08

+6
ce6_ct_phastv6officialfilt2_chrI.8272 1.92e-08

-6
ce6_ct_phastv6officialfilt2_chrIV.1549 3.17e-08

-6
ce6_ct_phastv6officialfilt2_chrIII.15032 5.76e-08

-6
ce6_ct_phastv6officialfilt2_chrIII.987 5.76e-08

-6
ce6_ct_phastv6officialfilt2_chrI.7824 5.76e-08

+6
ce6_ct_phastv6officialfilt2_chrIII.13562 9.97e-08

+6
ce6_ct_phastv6officialfilt2_chrIV.15806 9.97e-08

-6
ce6_ct_phastv6officialfilt2_chrIV.8159 9.97e-08

+6
ce6_ct_phastv6officialfilt2_chrIV.6868 9.97e-08

+6
ce6_ct_phastv6officialfilt2_chrII.15088 9.97e-08

+6
ce6_ct_phastv6officialfilt2_chrII.14805 9.97e-08

-6
ce6_ct_phastv6officialfilt2_chrX.12497 9.97e-08

+6
ce6_ct_phastv6officialfilt2_chrX.7827 9.97e-08

-6
ce6_ct_phastv6officialfilt2_chrIV.15987 1.54e-07

+6
ce6_ct_phastv6officialfilt2_chrV.9493 2.04e-07

-6
ce6_ct_phastv6officialfilt2_chrI.2421 2.04e-07

-6
ce6_ct_phastv6officialfilt2_chrIII.7339 2.59e-07

-6
ce6_ct_phastv6officialfilt2_chrIII.13046 3.20e-07

-6
ce6_ct_phastv6officialfilt2_chrIII.8128 3.20e-07

+6
ce6_ct_phastv6officialfilt2_chrI.13145 3.20e-07

+6
ce6_ct_phastv6officialfilt2_chrII.4800 3.67e-07

-6
ce6_ct_phastv6officialfilt2_chrV.9976 3.67e-07

-6
ce6_ct_phastv6officialfilt2_chrV.9629 3.67e-07

+6
ce6_ct_phastv6officialfilt2_chrII.12515 4.64e-07

-6
ce6_ct_phastv6officialfilt2_chrII.6260 4.64e-07

+6
ce6_ct_phastv6officialfilt2_chrV.5602 4.64e-07

-6
ce6_ct_phastv6officialfilt2_chrI.11433 4.64e-07

-6
ce6_ct_phastv6officialfilt2_chrX.13729 4.87e-07

+6
ce6_ct_phastv6officialfilt2_chrIII.984 5.29e-07

+6
ce6_ct_phastv6officialfilt2_chrII.9622 5.29e-07

-6
ce6_ct_phastv6officialfilt2_chrII.3039 5.29e-07

-6
ce6_ct_phastv6officialfilt2_chrIII.916 7.36e-07

-6
ce6_ct_phastv6officialfilt2_chrIV.1693 7.74e-07

+6
ce6_ct_phastv6officialfilt2_chrI.13309 9.39e-07

+6
ce6_ct_phastv6officialfilt2_chrIII.7042 1.08e-06

+6
ce6_ct_phastv6officialfilt2_chrIII.8238 2.10e-06

-6
ce6_ct_phastv6officialfilt2_chrIV.15624 2.10e-06

-6
ce6_ct_phastv6officialfilt2_chrIV.2280 2.10e-06

-6
ce6_ct_phastv6officialfilt2_chrII.1689 2.10e-06

-6
ce6_ct_phastv6officialfilt2_chrI.15443 2.10e-06

+6
ce6_ct_phastv6officialfilt2_chrI.2609 2.10e-06

+6
ce6_ct_phastv6officialfilt2_chrX.12745 2.79e-06

-6
ce6_ct_phastv6officialfilt2_chrIV.822 3.56e-06

-6
ce6_ct_phastv6officialfilt2_chrX.1496 4.02e-06

-6
ce6_ct_phastv6officialfilt2_chrIII.2276 9.21e-06

-6
SCALE
| | | | | |
1 25 50 75 100 125

Motif 6 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 6 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 6 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 6 regular-expression

GC[TG][CA]CGC[CG]C[AC][CT]

Time 17956.00 secs.

P N
MOTIF 7 width = 15 sites = 50 llr = 649 E-value = 1.6e-052

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
15.2 (bits)
Relative Entropy
18.7 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIII.781 + 4 5.92e-09 AATA TCGGAGTGTCGTTGC AAAACAAAA
ce6_ct_phastv6officialfilt2_chrIII.293 + 5 6.92e-09 GTGCG GCGGAGTGTCGTTGC AAGG
ce6_ct_phastv6officialfilt2_chrI.1757 + 4 6.92e-09 AATA GCGGAGTGTCGTTGC GCGC
ce6_ct_phastv6officialfilt2_chrIV.15056 + 16 1.06e-08 ATGCGGGATT TCGGAGTGTCGTTGT GAGA
ce6_ct_phastv6officialfilt2_chrII.171 + 4 1.06e-08 AATT TCGGAGTGTCGTTGT TGT
ce6_ct_phastv6officialfilt2_chrI.14105 + 12 1.06e-08 CAACGGAATA TCGGAGTGTCGTTGT TTATT
ce6_ct_phastv6officialfilt2_chrI.6624 + 4 1.06e-08 GATA TCGGAGTGTCGTTGT TTATTTTCAA
ce6_ct_phastv6officialfilt2_chrI.1671 - 14 1.06e-08 AAGCGGAACA TCGGAGTGTCGTTGT TTTTTGTTTA
ce6_ct_phastv6officialfilt2_chrIII.1582 + 7 1.26e-08 CTTAAAA GCGGAGTGTCGTTGT TTTTA
ce6_ct_phastv6officialfilt2_chrIII.1406 + 5 1.26e-08 TTCTA GCGGAGTGTCGTTGT TTTTCGCGCC
ce6_ct_phastv6officialfilt2_chrIII.1216 - 8 1.26e-08 TGGTGTACTA GCGGAGTGTCGTTGT TTTTCTTG
ce6_ct_phastv6officialfilt2_chrV.14746 - 5 1.26e-08 AGGTGA GCGGAGTGTCGTTGT GTTTG
ce6_ct_phastv6officialfilt2_chrI.6804 - 4 1.26e-08 GTGCGGGATT GCGGAGTGTCGTTGT GAAA
ce6_ct_phastv6officialfilt2_chrI.2771 + 33 3.51e-08 CTCCGTCATT CCGGAGTGTCGTTGC CACA
ce6_ct_phastv6officialfilt2_chrIII.1805 + 12 5.49e-08 CTGCGGGATT CCGGAGTGTCGTTGT ATGTCTT
ce6_ct_phastv6officialfilt2_chrIV.12700 + 30 7.33e-08 TGTAAGCTCA TCTGCGTCTCGCCGC
ce6_ct_phastv6officialfilt2_chrII.15082 - 4 1.83e-07 TGCGAGACGT TCTGCGTCTCTTCGC ACTG
ce6_ct_phastv6officialfilt2_chrIII.14666 - 9 2.62e-07 GCAAC TGTGCGTCACGGTGC TTGCGTACT
ce6_ct_phastv6officialfilt2_chrII.5368 + 5 2.62e-07 GTATA TCTGCGTCTCTTCGT CTTGCACACA
ce6_ct_phastv6officialfilt2_chrIII.11968 + 12 3.24e-07 TATGTGCGTT TGTGCGTCGCCGTGT TTGCACAATT
ce6_ct_phastv6officialfilt2_chrI.7499 + 2 3.24e-07 GT GCTGCGTCGCGGTCG CGTTACGACC
ce6_ct_phastv6officialfilt2_chrII.5523 + 7 4.04e-07 GTCCCTT TCGGTGTGTGTGTGT GTGTGTTCAT
ce6_ct_phastv6officialfilt2_chrIII.7113 - 9 4.47e-07 TC TTCGCGTGGCGGTGT TTGCACACT
ce6_ct_phastv6officialfilt2_chrIII.1819 - 9 4.47e-07 TGCATGCAAA AGTGCGTCGCGGTGT TTGCGTCCA
ce6_ct_phastv6officialfilt2_chrX.15896 + 51 4.47e-07 GGATAATGGA TGTGCGTGTGTTTGT GTGTGGAACA
ce6_ct_phastv6officialfilt2_chrV.14197 + 13 4.95e-07 TTTGTGCATT TTTGCGTCGCGGTGT ACTGC
ce6_ct_phastv6officialfilt2_chrI.15293 + 13 5.50e-07 GTGCGTTGCG TGTGCGTCGCGGTCG GCT
ce6_ct_phastv6officialfilt2_chrIII.7578 - 5 6.08e-07 TCTGTGTATT TGCGCGTCGCCGTGT CTGCG
ce6_ct_phastv6officialfilt2_chrIII.12636 + 2 6.67e-07 GT TGCGCGTCACGGTGT TCACACGTTT
ce6_ct_phastv6officialfilt2_chrX.3229 - 12 6.67e-07 ATGCGTGAAA TGGGCGTGTCCGTCG CGTCCATCAG
ce6_ct_phastv6officialfilt2_chrI.3512 - 4 6.67e-07 CCCCGTAATA TCGGAGTATCGTTGC CTCT
ce6_ct_phastv6officialfilt2_chrI.4685 - 21 7.35e-07 GTGTC GCTGCGTGTGTGCCC CTATGTAATG
ce6_ct_phastv6officialfilt2_chrII.10631 - 2 1.06e-06 TATTA TCTGCGTCTCTCTCC GC
ce6_ct_phastv6officialfilt2_chrX.5513 + 9 1.06e-06 CCAAACGTG TGTGTGTGTGTGTGC ACATA
ce6_ct_phastv6officialfilt2_chrV.2336 + 9 1.06e-06 ATGTGTATG TGTGTGTGTGTGTGC ACCGGGATAA
ce6_ct_phastv6officialfilt2_chrIV.5231 + 8 1.37e-06 CGAGTAAC TGTGTGTGTGTGTGT GAGTAT
ce6_ct_phastv6officialfilt2_chrX.3364 + 6 1.37e-06 TTCACG TGTGTGTGTGTGTGT GTTTT
ce6_ct_phastv6officialfilt2_chrV.9442 - 2 1.91e-06 TGGACATACT TGTGCGTGACTCTGC CG
ce6_ct_phastv6officialfilt2_chrV.4698 + 9 2.07e-06 GGTAAACGC GTCGCGTGTCTGCGT AGCGACTCTG
ce6_ct_phastv6officialfilt2_chrI.12166 - 48 2.07e-06 TAATTGAATT TGTGTGTGTGCGTGT GGAAGGATGT
ce6_ct_phastv6officialfilt2_chrII.2987 + 4 2.81e-06 GGTA GCGGAGTGTCGTACC TT
ce6_ct_phastv6officialfilt2_chrII.974 - 8 3.03e-06 TTGGATGCGT CGCGTGTCGCGTCGC GGTTGAAA
ce6_ct_phastv6officialfilt2_chrV.8801 + 3 3.03e-06 ACA GAGGCGTGGCTTCGC GCGCTAATTC
ce6_ct_phastv6officialfilt2_chrI.9678 + 0 3.50e-06 TCTGCGTGTGTATGT ATGCGCGCGG
ce6_ct_phastv6officialfilt2_chrI.7498 - 5 3.50e-06 ACC ACCGCGTCGCGGTCG ATTTG
ce6_ct_phastv6officialfilt2_chrIV.638 + 53 3.76e-06 ACACCGTAGT CCGGCGGCTGGCCGT GT
ce6_ct_phastv6officialfilt2_chrIII.7049 - 24 4.94e-06 G AGTGCGTGTGTGCGG TCAAAGACAG
ce6_ct_phastv6officialfilt2_chrV.4697 - 1 4.94e-06 TAC CCTGCGTCGCGGTCA C
ce6_ct_phastv6officialfilt2_chrI.4686 + 20 5.63e-06 CCGTACTCTT GCTGCGTAGCGCCCC TATCTTTT
ce6_ct_phastv6officialfilt2_chrX.5521 + 15 6.02e-06 GTTTTCCGCG TCGGGGGGTGGTCGT GCTGTGATGG

Motif 7 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIII.781 5.92e-09

+7
ce6_ct_phastv6officialfilt2_chrIII.293 6.92e-09

+7
ce6_ct_phastv6officialfilt2_chrI.1757 6.92e-09

+7
ce6_ct_phastv6officialfilt2_chrIV.15056 1.06e-08

+7
ce6_ct_phastv6officialfilt2_chrII.171 1.06e-08

+7
ce6_ct_phastv6officialfilt2_chrI.14105 1.06e-08

+7
ce6_ct_phastv6officialfilt2_chrI.6624 1.06e-08

+7
ce6_ct_phastv6officialfilt2_chrI.1671 1.06e-08

-7
ce6_ct_phastv6officialfilt2_chrIII.1582 1.26e-08

+7
ce6_ct_phastv6officialfilt2_chrIII.1406 1.26e-08

+7
ce6_ct_phastv6officialfilt2_chrIII.1216 1.26e-08

-7
ce6_ct_phastv6officialfilt2_chrV.14746 1.26e-08

-7
ce6_ct_phastv6officialfilt2_chrI.6804 1.26e-08

-7
ce6_ct_phastv6officialfilt2_chrI.2771 3.51e-08

+7
ce6_ct_phastv6officialfilt2_chrIII.1805 5.49e-08

+7
ce6_ct_phastv6officialfilt2_chrIV.12700 7.33e-08

+7
ce6_ct_phastv6officialfilt2_chrII.15082 1.83e-07

-7
ce6_ct_phastv6officialfilt2_chrIII.14666 2.62e-07

-7
ce6_ct_phastv6officialfilt2_chrII.5368 2.62e-07

+7
ce6_ct_phastv6officialfilt2_chrIII.11968 3.24e-07

+7
ce6_ct_phastv6officialfilt2_chrI.7499 3.24e-07

+7
ce6_ct_phastv6officialfilt2_chrII.5523 4.04e-07

+7
ce6_ct_phastv6officialfilt2_chrIII.7113 4.47e-07

-7
ce6_ct_phastv6officialfilt2_chrIII.1819 4.47e-07

-7
ce6_ct_phastv6officialfilt2_chrX.15896 4.47e-07

+7
ce6_ct_phastv6officialfilt2_chrV.14197 4.95e-07

+7
ce6_ct_phastv6officialfilt2_chrI.15293 5.50e-07

+7
ce6_ct_phastv6officialfilt2_chrIII.7578 6.08e-07

-7
ce6_ct_phastv6officialfilt2_chrIII.12636 6.67e-07

+7
ce6_ct_phastv6officialfilt2_chrX.3229 6.67e-07

-7
ce6_ct_phastv6officialfilt2_chrI.3512 6.67e-07

-7
ce6_ct_phastv6officialfilt2_chrI.4685 7.35e-07

-7
ce6_ct_phastv6officialfilt2_chrII.10631 1.06e-06

-7
ce6_ct_phastv6officialfilt2_chrX.5513 1.06e-06

+7
ce6_ct_phastv6officialfilt2_chrV.2336 1.06e-06

+7
ce6_ct_phastv6officialfilt2_chrIV.5231 1.37e-06

+7
ce6_ct_phastv6officialfilt2_chrX.3364 1.37e-06

+7
ce6_ct_phastv6officialfilt2_chrV.9442 1.91e-06

-7
ce6_ct_phastv6officialfilt2_chrV.4698 2.07e-06

+7
ce6_ct_phastv6officialfilt2_chrI.12166 2.07e-06

-7
ce6_ct_phastv6officialfilt2_chrII.2987 2.81e-06

+7
ce6_ct_phastv6officialfilt2_chrII.974 3.03e-06

-7
ce6_ct_phastv6officialfilt2_chrV.8801 3.03e-06

+7
ce6_ct_phastv6officialfilt2_chrI.9678 3.50e-06

+7
ce6_ct_phastv6officialfilt2_chrI.7498 3.50e-06

-7
ce6_ct_phastv6officialfilt2_chrIV.638 3.76e-06

+7
ce6_ct_phastv6officialfilt2_chrIII.7049 4.94e-06

-7
ce6_ct_phastv6officialfilt2_chrV.4697 4.94e-06

-7
ce6_ct_phastv6officialfilt2_chrI.4686 5.63e-06

+7
ce6_ct_phastv6officialfilt2_chrX.5521 6.02e-06

+7
SCALE
| | | |
1 25 50 75

Motif 7 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 7 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 7 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 7 regular-expression

[TG][CG][GT]G[CA]GT[GC][TG][CG][GT][TG][TC]G[TC]

Time 21081.05 secs.

P N
MOTIF 8 width = 14 sites = 50 llr = 722 E-value = 1.6e-085

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
18.4 (bits)
Relative Entropy
20.8 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrI.13936 - 10 5.79e-10 CAA ACGCGCTCCATTGC ACTTGGCTTT
ce6_ct_phastv6officialfilt2_chrIII.2932 - 7 2.79e-09 TAAAAGGCAA ATGCGCTCCATTGC ACCATGC
ce6_ct_phastv6officialfilt2_chrV.14062 + 7 2.79e-09 TGTGGAA ATGCGCTCCATTGC T
ce6_ct_phastv6officialfilt2_chrV.12017 + 8 2.79e-09 CGACCGAA ATGCGCTCCATTGC GAAAAAATGT
ce6_ct_phastv6officialfilt2_chrII.952 + 14 4.00e-09 TAAATGTCAA ATGCGCTCCACTGC G
ce6_ct_phastv6officialfilt2_chrII.3578 + 8 7.14e-09 TTAAACAA GTGCGCTCTATTGC ACACCGCTGG
ce6_ct_phastv6officialfilt2_chrII.1888 - 11 7.14e-09 GTTGGAGAAA GTGCGCTCCACTGA ACTGATTCCT
ce6_ct_phastv6officialfilt2_chrV.14066 + 10 1.25e-08 TGTGTGGCAA ATGCGCTCTATTGC TAATAGGAG
ce6_ct_phastv6officialfilt2_chrIV.1673 - 8 1.48e-08 GTAGAAA ACGCGCTCTATTGA GAATTTCA
ce6_ct_phastv6officialfilt2_chrV.12867 + 7 1.48e-08 GCTGAAA ACGCGCTCTATTGA CAATTTTCGT
ce6_ct_phastv6officialfilt2_chrV.2219 - 11 1.48e-08 AA ACGCGCTCTATTGA GAATTTTGTG
ce6_ct_phastv6officialfilt2_chrII.13854 - 8 1.76e-08 CAA ACGCGCTCTACTGA ACTTTTTA
ce6_ct_phastv6officialfilt2_chrX.10285 + 3 1.89e-08 CAA GTGCGCTCTACTGA GAAACGG
ce6_ct_phastv6officialfilt2_chrII.1653 - 8 2.29e-08 GATAAAA ATGCGCTCTATTGA AAAATATG
ce6_ct_phastv6officialfilt2_chrIII.1823 + 10 2.60e-08 AATCGTGAAA ATGCGCTCCAATGC AACTATC
ce6_ct_phastv6officialfilt2_chrIII.1276 + 7 2.96e-08 GCAGAAA ACGCGCTCTAATGC GAAT
ce6_ct_phastv6officialfilt2_chrIV.2980 + 1 2.96e-08 A GTGCGCTCCAATGA GAAACAGTCC
ce6_ct_phastv6officialfilt2_chrV.14701 + 9 2.96e-08 GGTCAGAAA ACGCGCTCTAATGC AA
ce6_ct_phastv6officialfilt2_chrV.12290 + 24 3.17e-08 TCCCGGGAAA GTGCGCTCTACCGC AATTCTGCAG
ce6_ct_phastv6officialfilt2_chrIII.2165 - 13 3.54e-08 AACTGAGCAT GCGCGCTCTAATGA GAAAAATTAG
ce6_ct_phastv6officialfilt2_chrIII.1846 + 8 3.54e-08 TAAATCAA ATGCGCTCCACCGA ACTCGGGTT
ce6_ct_phastv6officialfilt2_chrIV.2823 - 13 5.46e-08 TGAAA ATGCGCTCCAACGC GAATTTATAG
ce6_ct_phastv6officialfilt2_chrI.1242 - 32 5.75e-08 GGCGAAA ACGCGCTCCGTTGA CAAATTATTG
ce6_ct_phastv6officialfilt2_chrIV.6029 - 24 6.58e-08 CAA GCGCGCTCTACGGC TAAAATCGAT
ce6_ct_phastv6officialfilt2_chrIII.15185 + 2 8.08e-08 AA TCGCGCTCTATTGC GAACT
ce6_ct_phastv6officialfilt2_chrV.586 + 9 8.08e-08 ATATCGAAA ATGCGCTCCGCTGA GAATTGGTCG
ce6_ct_phastv6officialfilt2_chrIII.2166 - 1 1.09e-07 ACGATTGCAA ATGCGCTCTAGTGA T
ce6_ct_phastv6officialfilt2_chrIV.2027 + 9 1.09e-07 GTGCTGCAA ATGCGCTCTAGTGA TAATTAGTT
ce6_ct_phastv6officialfilt2_chrIV.15384 - 7 1.38e-07 GAAA TCGCGCTCCACCGC ACACAAT
ce6_ct_phastv6officialfilt2_chrIII.5322 - 18 1.53e-07 AA GTACGCTCCACTGC AGTTTTTCGA
ce6_ct_phastv6officialfilt2_chrIV.2181 - 14 1.74e-07 TAA TTGCGCTCCATCGC ACACCGCGCC
ce6_ct_phastv6officialfilt2_chrI.1824 - 11 1.74e-07 TTGAACAA ACGCGCCCCATTGA GAAATTGAGT
ce6_ct_phastv6officialfilt2_chrIII.11882 + 3 1.96e-07 CAA GTTCGCTCCACTGC ATTTCGCACG
ce6_ct_phastv6officialfilt2_chrIV.3618 + 8 1.96e-07 CAAATCAA ACGCGCTCTTTTGA GAATTTTATT
ce6_ct_phastv6officialfilt2_chrII.1502 - 2 2.41e-07 TCCATTTCAA ACGCGCTCTATAGA AC
ce6_ct_phastv6officialfilt2_chrII.13855 - 7 2.65e-07 ATGCTA GTGTGCTCTACTGA ACCTTTT
ce6_ct_phastv6officialfilt2_chrIII.2695 + 14 3.25e-07 AAAAAAGCAA ATTCGCTCCATTGA TAAAT
ce6_ct_phastv6officialfilt2_chrII.1085 - 9 3.25e-07 AA GCTCGCTCTATTGA GAATCTGAA
ce6_ct_phastv6officialfilt2_chrX.5445 - 65 3.53e-07 AA GTACGCTCCATCGC ACTAGTTTAT
ce6_ct_phastv6officialfilt2_chrII.15052 + 7 4.06e-07 TGCGAAA GTGCGCTCCAAAGA GAAAATATCG
ce6_ct_phastv6officialfilt2_chrIV.1107 + 11 4.37e-07 CACGAAGCAA GCGTGCTCTAATGA GAATTTTTTT
ce6_ct_phastv6officialfilt2_chrII.1529 + 7 6.09e-07 TTTGCAA ATGTGCTCTAATGA GAAAAATTCG
ce6_ct_phastv6officialfilt2_chrIV.2980 - 23 7.93e-07 AA GTGCGCTCTGATGG ACTGTTTCTC
ce6_ct_phastv6officialfilt2_chrIV.2120 + 7 7.93e-07 GTGGCAA ATGTGCTCTATTGG CGATTGTTGT
ce6_ct_phastv6officialfilt2_chrX.3409 + 16 7.93e-07 CCCTGTTTTT ATGCGATCTATTGC TCATTTATTC
ce6_ct_phastv6officialfilt2_chrI.12253 - 5 7.93e-07 T ACGCGCGCCTTTGA GTGAG
ce6_ct_phastv6officialfilt2_chrIV.3583 + 31 9.54e-07 TCTCTCGTTT GCGCGCGCTTTTGA GAGTTG
ce6_ct_phastv6officialfilt2_chrII.7278 - 9 1.26e-06 A GCATGCTCCATTGA GAATGGTGT
ce6_ct_phastv6officialfilt2_chrV.8801 - 50 1.26e-06 CGGTCAGCAA GTGTGCTCTATCGG CCTTCCCGCG
ce6_ct_phastv6officialfilt2_chrI.1172 - 12 1.66e-06 ATATGCAA ATACGCTCTATGGA AAAATTTTCC

Motif 8 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrI.13936 5.79e-10

-8
ce6_ct_phastv6officialfilt2_chrIII.2932 2.79e-09

-8
ce6_ct_phastv6officialfilt2_chrV.14062 2.79e-09

+8
ce6_ct_phastv6officialfilt2_chrV.12017 2.79e-09

+8
ce6_ct_phastv6officialfilt2_chrII.952 4.00e-09

+8
ce6_ct_phastv6officialfilt2_chrII.3578 7.14e-09

+8
ce6_ct_phastv6officialfilt2_chrII.1888 7.14e-09

-8
ce6_ct_phastv6officialfilt2_chrV.14066 1.25e-08

+8
ce6_ct_phastv6officialfilt2_chrIV.1673 1.48e-08

-8
ce6_ct_phastv6officialfilt2_chrV.12867 1.48e-08

+8
ce6_ct_phastv6officialfilt2_chrV.2219 1.48e-08

-8
ce6_ct_phastv6officialfilt2_chrII.13854 1.76e-08

-8
ce6_ct_phastv6officialfilt2_chrX.10285 1.89e-08

+8
ce6_ct_phastv6officialfilt2_chrII.1653 2.29e-08

-8
ce6_ct_phastv6officialfilt2_chrIII.1823 2.60e-08

+8
ce6_ct_phastv6officialfilt2_chrIII.1276 2.96e-08

+8
ce6_ct_phastv6officialfilt2_chrIV.2980 2.96e-08

+8
-8
ce6_ct_phastv6officialfilt2_chrV.14701 2.96e-08

+8
ce6_ct_phastv6officialfilt2_chrV.12290 3.17e-08

+8
ce6_ct_phastv6officialfilt2_chrIII.2165 3.54e-08

-8
ce6_ct_phastv6officialfilt2_chrIII.1846 3.54e-08

+8
ce6_ct_phastv6officialfilt2_chrIV.2823 5.46e-08

-8
ce6_ct_phastv6officialfilt2_chrI.1242 5.75e-08

-8
ce6_ct_phastv6officialfilt2_chrIV.6029 6.58e-08

-8
ce6_ct_phastv6officialfilt2_chrIII.15185 8.08e-08

+8
ce6_ct_phastv6officialfilt2_chrV.586 8.08e-08

+8
ce6_ct_phastv6officialfilt2_chrIII.2166 1.09e-07

-8
ce6_ct_phastv6officialfilt2_chrIV.2027 1.09e-07

+8
ce6_ct_phastv6officialfilt2_chrIV.15384 1.38e-07

-8
ce6_ct_phastv6officialfilt2_chrIII.5322 1.53e-07

-8
ce6_ct_phastv6officialfilt2_chrIV.2181 1.74e-07

-8
ce6_ct_phastv6officialfilt2_chrI.1824 1.74e-07

-8
ce6_ct_phastv6officialfilt2_chrIII.11882 1.96e-07

+8
ce6_ct_phastv6officialfilt2_chrIV.3618 1.96e-07

+8
ce6_ct_phastv6officialfilt2_chrII.1502 2.41e-07

-8
ce6_ct_phastv6officialfilt2_chrII.13855 2.65e-07

-8
ce6_ct_phastv6officialfilt2_chrIII.2695 3.25e-07

+8
ce6_ct_phastv6officialfilt2_chrII.1085 3.25e-07

-8
ce6_ct_phastv6officialfilt2_chrX.5445 3.53e-07

-8
ce6_ct_phastv6officialfilt2_chrII.15052 4.06e-07

+8
ce6_ct_phastv6officialfilt2_chrIV.1107 4.37e-07

+8
ce6_ct_phastv6officialfilt2_chrII.1529 6.09e-07

+8
ce6_ct_phastv6officialfilt2_chrIV.2120 7.93e-07

+8
ce6_ct_phastv6officialfilt2_chrX.3409 7.93e-07

+8
ce6_ct_phastv6officialfilt2_chrI.12253 7.93e-07

-8
ce6_ct_phastv6officialfilt2_chrIV.3583 9.54e-07

+8
ce6_ct_phastv6officialfilt2_chrII.7278 1.26e-06

-8
ce6_ct_phastv6officialfilt2_chrV.8801 1.26e-06

-8
ce6_ct_phastv6officialfilt2_chrI.1172 1.66e-06

-8
SCALE
| | | |
1 25 50 75

Motif 8 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 8 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 8 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 8 regular-expression

[AG][TC]GCGCTC[TC]A[TCA]TG[AC]

Time 23860.98 secs.

P N
MOTIF 9 width = 14 sites = 49 llr = 731 E-value = 1.5e-094

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
20.6 (bits)
Relative Entropy
21.5 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIII.1490 - 4 1.48e-09 GTACTTTCCA AGCTACAGTAACCC GAAA
ce6_ct_phastv6officialfilt2_chrIII.479 - 5 1.48e-09 ATACTTTTGG AGCTACAGTAACCC AATGT
ce6_ct_phastv6officialfilt2_chrIV.1814 - 7 1.48e-09 CGA AGCTACAGTAACCC GAATTTT
ce6_ct_phastv6officialfilt2_chrII.2358 - 5 1.48e-09 AGATTTTTTC AGCTACAGTAACCC AAAGA
ce6_ct_phastv6officialfilt2_chrX.5750 + 5 1.48e-09 CGTAC AGCTACAGTAACCC AAACA
ce6_ct_phastv6officialfilt2_chrV.15048 - 37 1.48e-09 ACCATA AGCTACAGTAACCC AACCCTACCG
ce6_ct_phastv6officialfilt2_chrI.13291 - 5 1.48e-09 AGATTACTGT AGCTACAGTAACCC TGCAG
ce6_ct_phastv6officialfilt2_chrIII.1850 - 9 2.89e-09 GTCA GGCTACAGTAACCC GGGAAAACT
ce6_ct_phastv6officialfilt2_chrIII.946 - 2 3.60e-09 ACGTAACCCG CGCTACAGTAACCC AG
ce6_ct_phastv6officialfilt2_chrIII.14779 + 17 8.15e-09 GTGCCTTTAA AACTACAGTAACCC ATAATTTCAA
ce6_ct_phastv6officialfilt2_chrIII.1320 - 28 8.15e-09 GCT AACTACAGTAACCC CAAGAATTCG
ce6_ct_phastv6officialfilt2_chrI.6736 + 13 8.15e-09 TCCTACAGTA ACCTACAGTAACCC AT
ce6_ct_phastv6officialfilt2_chrI.4778 + 7 8.15e-09 CTTTAAA AACTACAGTAACCC TTGTCC
ce6_ct_phastv6officialfilt2_chrIV.1049 + 19 1.41e-08 GTACGGTAGA AGCTACAGTAATCC AAAAAAAATC
ce6_ct_phastv6officialfilt2_chrI.14561 + 3 1.41e-08 AAA AGCTACAGTAATCC GTCTACAGTA
ce6_ct_phastv6officialfilt2_chrII.1011 - 6 1.63e-08 TCA AACTACAGTACCCC TGAGAT
ce6_ct_phastv6officialfilt2_chrI.14146 - 35 1.94e-08 TTCATCAAAA ATCTACAGTAACCC AGTGGTTTTC
ce6_ct_phastv6officialfilt2_chrIII.13459 - 4 2.78e-08 CTGA AGCTACAGTAACCT AAAA
ce6_ct_phastv6officialfilt2_chrIV.2003 + 24 2.78e-08 CACCGCGAAA CACTACAGTAACCC GG
ce6_ct_phastv6officialfilt2_chrI.14085 - 16 2.78e-08 GGATTACTGC AGCTACAGTAACCT GGGCACAATG
ce6_ct_phastv6officialfilt2_chrIII.8793 - 36 3.04e-08 AAGGA AGCTACAGTACTCC CCTTCTTTTC
ce6_ct_phastv6officialfilt2_chrII.13648 - 8 3.04e-08 CTC AGCTACAGTACTCC AACTGCAA
ce6_ct_phastv6officialfilt2_chrI.14162 + 18 3.04e-08 GTACTTTCGG GGCTACCGTAACCC AAAATTCAT
ce6_ct_phastv6officialfilt2_chrI.13855 + 2 3.18e-08 CT AGGTACAGTAACCC TACAGTAAC
ce6_ct_phastv6officialfilt2_chrI.13293 + 6 3.51e-08 ATAGTA ATCTACAGTACCCC TATTCTAGAG
ce6_ct_phastv6officialfilt2_chrII.2885 + 7 5.82e-08 TAAGTTT AACTACAGTAATCC TACAGTAGCC
ce6_ct_phastv6officialfilt2_chrI.14085 + 37 5.82e-08 GCTGCAGTAA TCCTACAGTAACCC TACC
ce6_ct_phastv6officialfilt2_chrI.15129 + 4 6.02e-08 TTGG GGCTACGGTAACCC AATGA
ce6_ct_phastv6officialfilt2_chrIV.2097 + 5 6.80e-08 TTTAA GGGTACAGTAACCC AAGGGTTAC
ce6_ct_phastv6officialfilt2_chrV.12341 - 4 7.95e-08 GAAAATTTTA AGCTACAGTAACCA GCTT
ce6_ct_phastv6officialfilt2_chrII.5754 - 5 9.50e-08 GT AGTTACAGTAACCC AGAAA
ce6_ct_phastv6officialfilt2_chrI.13293 + 32 9.50e-08 TTCTAGAGTG ACCTACAGTAACCT ACAGAGAA
ce6_ct_phastv6officialfilt2_chrI.14528 - 36 1.21e-07 A AAGTACAGTAACCC TTAAATTTTT
ce6_ct_phastv6officialfilt2_chrI.7821 + 23 1.21e-07 CTAGACACCT TTCTACAGTAACCC TAGATAA
ce6_ct_phastv6officialfilt2_chrI.14578 - 6 1.51e-07 CTGGATCA AGCTACAGTAATCT TGTGTA
ce6_ct_phastv6officialfilt2_chrIV.3307 + 25 1.84e-07 ACAGAATTCG AGCTACAGTACCAC A
ce6_ct_phastv6officialfilt2_chrI.64 - 1 2.30e-07 GCGCCGAGAC CACTACAGTAACCT A
ce6_ct_phastv6officialfilt2_chrIV.13813 - 1 2.65e-07 TGATCTACAG TACTACAGTAATCC T
ce6_ct_phastv6officialfilt2_chrII.13712 + 4 2.65e-07 GTGT TCCTACAGTAATCC TAGAGTAAGC
ce6_ct_phastv6officialfilt2_chrII.405 + 2 2.65e-07 TG AACTACAGTAACCA GAAAATTGCA
ce6_ct_phastv6officialfilt2_chrII.11913 + 3 3.63e-07 AAC AACTACCGTACTCC GCTTAAAGGC
ce6_ct_phastv6officialfilt2_chrI.6215 + 15 4.27e-07 AGCCACCGTA ACCTACAGTAATCT TCAAC
ce6_ct_phastv6officialfilt2_chrI.4128 - 1 4.27e-07 TGCAGGTTCT CTCTACCGTACCCC T
ce6_ct_phastv6officialfilt2_chrIII.14594 + 4 5.34e-07 CCGA GCCTACAGTATCCC TACAGTAATC
ce6_ct_phastv6officialfilt2_chrI.28 - 44 6.87e-07 TAA AACTACAGTACACC ATATTTAAAG
ce6_ct_phastv6officialfilt2_chrI.11993 - 19 1.47e-06 TACGCAAATT CTCTACAGTAATCT TAAAGGCGCA
ce6_ct_phastv6officialfilt2_chrII.9887 - 1 1.87e-06 CTGAAACGAG TGTTACCGTACCCC G
ce6_ct_phastv6officialfilt2_chrII.1795 - 6 2.49e-06 CG ATATACAGTAATCC TACAGC
ce6_ct_phastv6officialfilt2_chrI.5799 + 20 2.49e-06 AAAGGCGCAT GACTACGGTAACAC TCGTTTCAGC

Motif 9 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIII.1490 1.48e-09

-9
ce6_ct_phastv6officialfilt2_chrIII.479 1.48e-09

-9
ce6_ct_phastv6officialfilt2_chrIV.1814 1.48e-09

-9
ce6_ct_phastv6officialfilt2_chrII.2358 1.48e-09

-9
ce6_ct_phastv6officialfilt2_chrX.5750 1.48e-09

+9
ce6_ct_phastv6officialfilt2_chrV.15048 1.48e-09

-9
ce6_ct_phastv6officialfilt2_chrI.13291 1.48e-09

-9
ce6_ct_phastv6officialfilt2_chrIII.1850 2.89e-09

-9
ce6_ct_phastv6officialfilt2_chrIII.946 3.60e-09

-9
ce6_ct_phastv6officialfilt2_chrIII.14779 8.15e-09

+9
ce6_ct_phastv6officialfilt2_chrIII.1320 8.15e-09

-9
ce6_ct_phastv6officialfilt2_chrI.6736 8.15e-09

+9
ce6_ct_phastv6officialfilt2_chrI.4778 8.15e-09

+9
ce6_ct_phastv6officialfilt2_chrIV.1049 1.41e-08

+9
ce6_ct_phastv6officialfilt2_chrI.14561 1.41e-08

+9
ce6_ct_phastv6officialfilt2_chrII.1011 1.63e-08

-9
ce6_ct_phastv6officialfilt2_chrI.14146 1.94e-08

-9
ce6_ct_phastv6officialfilt2_chrIII.13459 2.78e-08

-9
ce6_ct_phastv6officialfilt2_chrIV.2003 2.78e-08

+9
ce6_ct_phastv6officialfilt2_chrI.14085 2.78e-08

-9
+9
ce6_ct_phastv6officialfilt2_chrIII.8793 3.04e-08

-9
ce6_ct_phastv6officialfilt2_chrII.13648 3.04e-08

-9
ce6_ct_phastv6officialfilt2_chrI.14162 3.04e-08

+9
ce6_ct_phastv6officialfilt2_chrI.13855 3.18e-08

+9
ce6_ct_phastv6officialfilt2_chrI.13293 3.51e-08

+9
+9
ce6_ct_phastv6officialfilt2_chrII.2885 5.82e-08

+9
ce6_ct_phastv6officialfilt2_chrI.15129 6.02e-08

+9
ce6_ct_phastv6officialfilt2_chrIV.2097 6.80e-08

+9
ce6_ct_phastv6officialfilt2_chrV.12341 7.95e-08

-9
ce6_ct_phastv6officialfilt2_chrII.5754 9.50e-08

-9
ce6_ct_phastv6officialfilt2_chrI.14528 1.21e-07

-9
ce6_ct_phastv6officialfilt2_chrI.7821 1.21e-07

+9
ce6_ct_phastv6officialfilt2_chrI.14578 1.51e-07

-9
ce6_ct_phastv6officialfilt2_chrIV.3307 1.84e-07

+9
ce6_ct_phastv6officialfilt2_chrI.64 2.30e-07

-9
ce6_ct_phastv6officialfilt2_chrIV.13813 2.65e-07

-9
ce6_ct_phastv6officialfilt2_chrII.13712 2.65e-07

+9
ce6_ct_phastv6officialfilt2_chrII.405 2.65e-07

+9
ce6_ct_phastv6officialfilt2_chrII.11913 3.63e-07

+9
ce6_ct_phastv6officialfilt2_chrI.6215 4.27e-07

+9
ce6_ct_phastv6officialfilt2_chrI.4128 4.27e-07

-9
ce6_ct_phastv6officialfilt2_chrIII.14594 5.34e-07

+9
ce6_ct_phastv6officialfilt2_chrI.28 6.87e-07

-9
ce6_ct_phastv6officialfilt2_chrI.11993 1.47e-06

-9
ce6_ct_phastv6officialfilt2_chrII.9887 1.87e-06

-9
ce6_ct_phastv6officialfilt2_chrII.1795 2.49e-06

-9
ce6_ct_phastv6officialfilt2_chrI.5799 2.49e-06

+9
SCALE
| | |
1 25 50

Motif 9 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 9 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 9 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 9 regular-expression

A[GA]CTACAGTAA[CT]CC

Time 26625.47 secs.

P N
MOTIF 10 width = 15 sites = 50 llr = 740 E-value = 1.4e-091

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
19.8 (bits)
Relative Entropy
21.4 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrI.2192 - 2 1.42e-09 CGTAGTTC GGTGGCCGAGAATTC CG
ce6_ct_phastv6officialfilt2_chrIV.1890 - 22 2.52e-09 C GGTGGCCTAGAAATT TTTGGATTTT
ce6_ct_phastv6officialfilt2_chrI.18 + 4 5.76e-09 GCAG CGTGGCCTAGAAATT CCTA
ce6_ct_phastv6officialfilt2_chrIII.13188 - 21 8.41e-09 CCA CGTGGCCTAGAAAAC GCAAAAACTC
ce6_ct_phastv6officialfilt2_chrX.40 - 0 9.79e-09 ATTTGAAGTT GGTGGCCTAGTTTTC
ce6_ct_phastv6officialfilt2_chrI.1950 - 1 9.79e-09 AAAAT GGTGGCCTAGATTTT T
ce6_ct_phastv6officialfilt2_chrIV.1207 + 2 1.20e-08 TT GGCGGCCTAGAAATC CAAAACTAG
ce6_ct_phastv6officialfilt2_chrI.2273 - 24 1.64e-08 CT GATGGCCTAGAATTC CATTTCTAGG
ce6_ct_phastv6officialfilt2_chrIII.2388 + 4 1.86e-08 ACTT GGTGGCCGAGTTTTC AATTTCCTCG
ce6_ct_phastv6officialfilt2_chrII.13499 + 3 1.86e-08 ATT GGTGGCCGAGTTTTC TTTT
ce6_ct_phastv6officialfilt2_chrI.14073 + 5 1.86e-08 GCATA CGTGGCCTAGATTTT ACAAGAAAGT
ce6_ct_phastv6officialfilt2_chrI.587 - 4 1.86e-08 AAAAATAATT GGTGGCCGAGTTTTC TCTT
ce6_ct_phastv6officialfilt2_chrIII.1223 + 10 2.18e-08 TTCCCGTGGC CGCGGCCTAGAAATC
ce6_ct_phastv6officialfilt2_chrIII.13330 + 3 2.78e-08 TCT CATGGCCTAGAATTC CAAAACTCGG
ce6_ct_phastv6officialfilt2_chrII.13755 - 4 2.78e-08 GCAA CGTGGCCGAGAAATG CAGA
ce6_ct_phastv6officialfilt2_chrI.2921 + 7 2.78e-08 AGTACGC CGTGGCCTAGAAAAT CAAAAACTAG
ce6_ct_phastv6officialfilt2_chrI.14072 - 26 3.14e-08 CGGCCTTT GGTGGCCTAGTTTTT TCCGGAAAAC
ce6_ct_phastv6officialfilt2_chrI.13340 - 4 3.14e-08 AAGTT GGTGGCCTAGTTTTT TATA
ce6_ct_phastv6officialfilt2_chrIV.2244 - 9 4.54e-08 TTTTTCACTT GGCGGCCTAGAAAAC CAAAAGTTA
ce6_ct_phastv6officialfilt2_chrIV.1810 - 3 4.54e-08 GTA GATGGCCTAGAAAAC CAA
ce6_ct_phastv6officialfilt2_chrII.1917 + 7 4.54e-08 CAGATTA GATGGCCTAGAAAAC C
ce6_ct_phastv6officialfilt2_chrIII.3164 - 35 5.02e-08 TTCAA GATGGCCGAGATTTC TAATTTTCTA
ce6_ct_phastv6officialfilt2_chrII.13498 + 4 5.02e-08 AATT GGTGGCCGAGTTTTT GACTTTTCTA
ce6_ct_phastv6officialfilt2_chrI.2819 + 6 5.02e-08 ATCTGT GGTGGCCGAGTTTTT GTTTTCTAGG
ce6_ct_phastv6officialfilt2_chrII.13498 - 21 5.70e-08 ACTG CGTGGCCTAGAAAAG TCAAAAACTC
ce6_ct_phastv6officialfilt2_chrI.1825 + 55 5.70e-08 CTTAACAATT CATGGCCTAGAAATT CCAAAAT
ce6_ct_phastv6officialfilt2_chrII.3039 + 46 7.16e-08 ATTCCTAGTC CATGGCCTAGAAAAC TCCAT
ce6_ct_phastv6officialfilt2_chrV.15212 + 8 7.16e-08 ACACTGGC CGCGGCCTAGAAAAC TCCAATTCTT
ce6_ct_phastv6officialfilt2_chrI.777 + 4 7.84e-08 CCCA CATGGCCTAGAAACC CAAGCCTAGG
ce6_ct_phastv6officialfilt2_chrIV.1890 + 3 9.56e-08 GTT GGTGGCCTAAAAATC CAAAAATTTC
ce6_ct_phastv6officialfilt2_chrII.13762 + 2 9.56e-08 AT GGTGGCCGAGTTTTG GTTTTTTCGG
ce6_ct_phastv6officialfilt2_chrIII.12692 - 30 1.05e-07 TAT GATGGCCTAGAAAAT ATTTTTGGTG
ce6_ct_phastv6officialfilt2_chrIV.2258 + 4 1.05e-07 TAAC GGTGGCCTAGTTTCT GGGATTTCTA
ce6_ct_phastv6officialfilt2_chrIV.2076 - 2 1.05e-07 TTCT GATGGCCTAGAAAAT CT
ce6_ct_phastv6officialfilt2_chrI.2018 - 18 1.28e-07 CGC AGTGGCCTAGAAATT TGAAAAACTC
ce6_ct_phastv6officialfilt2_chrI.892 - 3 1.28e-07 TGA TGTGGCCTAGAAATT CTT
ce6_ct_phastv6officialfilt2_chrI.14074 + 4 1.54e-07 CACT CGTGGCCTAGTTTCT CGCAAAAGTT
ce6_ct_phastv6officialfilt2_chrI.13256 + 5 1.54e-07 TGCTG CATGGCCTAGAAAAT TCGGGAAAAC
ce6_ct_phastv6officialfilt2_chrI.184 - 2 1.54e-07 GACGAGTTTT TGTGGCCTAGAAAAC TC
ce6_ct_phastv6officialfilt2_chrI.196 - 4 1.81e-07 ACAAAGTTTC TGTGGCCGAGAAATT GAAC
ce6_ct_phastv6officialfilt2_chrIII.1377 - 5 2.13e-07 GCATCT GATGGCCTAGAGACC TAAAT
ce6_ct_phastv6officialfilt2_chrIII.15851 + 3 2.53e-07 TCT GGTGGCCTAAAAACC TACAA
ce6_ct_phastv6officialfilt2_chrV.15356 - 23 2.74e-07 GAGC GATGGCCTAGTTTTG GGTTTCTAGG
ce6_ct_phastv6officialfilt2_chrIV.15760 - 2 3.20e-07 TATG AGTGGCCGAGTTTTC TA
ce6_ct_phastv6officialfilt2_chrI.14072 + 5 3.70e-07 GCTTA CGTGGCCTAGGGTTT TCCGGAAAAA
ce6_ct_phastv6officialfilt2_chrII.12776 - 4 3.92e-07 TGGA CATGGCCTAGAAATA CATT
ce6_ct_phastv6officialfilt2_chrV.14118 - 4 5.57e-07 GAAGAAACT GATGGCCGAGGTTTT ATTA
ce6_ct_phastv6officialfilt2_chrII.13980 - 24 6.69e-07 TCTTCAACT AGTGGCCTAGAAATA TAAATTTCTA
ce6_ct_phastv6officialfilt2_chrV.13569 - 4 1.07e-06 GCTATGCACG CGTGGCCTAGTGGTG TGTA
ce6_ct_phastv6officialfilt2_chrI.14073 - 24 1.13e-06 TGGCCAGT GGTGGCCTAACTTTC TTGTAAAATC

Motif 10 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrI.2192 1.42e-09

-10
ce6_ct_phastv6officialfilt2_chrIV.1890 2.52e-09

+10
-10
ce6_ct_phastv6officialfilt2_chrI.18 5.76e-09

+10
ce6_ct_phastv6officialfilt2_chrIII.13188 8.41e-09

-10
ce6_ct_phastv6officialfilt2_chrX.40 9.79e-09

-10
ce6_ct_phastv6officialfilt2_chrI.1950 9.79e-09

-10
ce6_ct_phastv6officialfilt2_chrIV.1207 1.20e-08

+10
ce6_ct_phastv6officialfilt2_chrI.2273 1.64e-08

-10
ce6_ct_phastv6officialfilt2_chrIII.2388 1.86e-08

+10
ce6_ct_phastv6officialfilt2_chrII.13499 1.86e-08

+10
ce6_ct_phastv6officialfilt2_chrI.14073 1.86e-08

+10
-10
ce6_ct_phastv6officialfilt2_chrI.587 1.86e-08

-10
ce6_ct_phastv6officialfilt2_chrIII.1223 2.18e-08

+10
ce6_ct_phastv6officialfilt2_chrIII.13330 2.78e-08

+10
ce6_ct_phastv6officialfilt2_chrII.13755 2.78e-08

-10
ce6_ct_phastv6officialfilt2_chrI.2921 2.78e-08

+10
ce6_ct_phastv6officialfilt2_chrI.14072 3.14e-08

+10
-10
ce6_ct_phastv6officialfilt2_chrI.13340 3.14e-08

-10
ce6_ct_phastv6officialfilt2_chrIV.2244 4.54e-08

-10
ce6_ct_phastv6officialfilt2_chrIV.1810 4.54e-08

-10
ce6_ct_phastv6officialfilt2_chrII.1917 4.54e-08

+10
ce6_ct_phastv6officialfilt2_chrIII.3164 5.02e-08

-10
ce6_ct_phastv6officialfilt2_chrII.13498 5.02e-08

+10
-10
ce6_ct_phastv6officialfilt2_chrI.2819 5.02e-08

+10
ce6_ct_phastv6officialfilt2_chrI.1825 5.70e-08

+10
ce6_ct_phastv6officialfilt2_chrII.3039 7.16e-08

+10
ce6_ct_phastv6officialfilt2_chrV.15212 7.16e-08

+10
ce6_ct_phastv6officialfilt2_chrI.777 7.84e-08

+10
ce6_ct_phastv6officialfilt2_chrII.13762 9.56e-08

+10
ce6_ct_phastv6officialfilt2_chrIII.12692 1.05e-07

-10
ce6_ct_phastv6officialfilt2_chrIV.2258 1.05e-07

+10
ce6_ct_phastv6officialfilt2_chrIV.2076 1.05e-07

-10
ce6_ct_phastv6officialfilt2_chrI.2018 1.28e-07

-10
ce6_ct_phastv6officialfilt2_chrI.892 1.28e-07

-10
ce6_ct_phastv6officialfilt2_chrI.14074 1.54e-07

+10
ce6_ct_phastv6officialfilt2_chrI.13256 1.54e-07

+10
ce6_ct_phastv6officialfilt2_chrI.184 1.54e-07

-10
ce6_ct_phastv6officialfilt2_chrI.196 1.81e-07

-10
ce6_ct_phastv6officialfilt2_chrIII.1377 2.13e-07

-10
ce6_ct_phastv6officialfilt2_chrIII.15851 2.53e-07

+10
ce6_ct_phastv6officialfilt2_chrV.15356 2.74e-07

-10
ce6_ct_phastv6officialfilt2_chrIV.15760 3.20e-07

-10
ce6_ct_phastv6officialfilt2_chrII.12776 3.92e-07

-10
ce6_ct_phastv6officialfilt2_chrV.14118 5.57e-07

-10
ce6_ct_phastv6officialfilt2_chrII.13980 6.69e-07

-10
ce6_ct_phastv6officialfilt2_chrV.13569 1.07e-06

-10
SCALE
| | | |
1 25 50 75

Motif 10 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 10 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 10 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 10 regular-expression

[GC][GA]TGGCC[TG]AG[AT][AT][AT][TA][CT]

Time 29328.46 secs.

P N
MOTIF 11 width = 14 sites = 28 llr = 462 E-value = 2.5e-057

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
20.1 (bits)
Relative Entropy
23.8 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIV.365 - 6 2.40e-10 CTTGAAA GGGTCTCGCCACGA TACGCC
ce6_ct_phastv6officialfilt2_chrIII.13561 + 11 5.18e-10 AGGGTTTTTA GGGTCTCGCAGCGA AAATC
ce6_ct_phastv6officialfilt2_chrII.12272 - 23 5.18e-10 TAAGAGCGTC GGGTCTCGCAGCGA ACGCGCGAAA
ce6_ct_phastv6officialfilt2_chrII.9951 - 5 5.18e-10 CCACGGCCAT GGGTCTCGCAGCGA TTAGC
ce6_ct_phastv6officialfilt2_chrV.4956 - 5 5.18e-10 GCGAAAGCGC GGGTCTCGCAGCGA AGAGC
ce6_ct_phastv6officialfilt2_chrI.1600 - 19 8.57e-10 ATTGT GGGTCTCGCAACGA AAATTGAGAT
ce6_ct_phastv6officialfilt2_chrIII.13524 - 5 1.71e-09 GTACTTT GGGTCTCACCACGA TTTCG
ce6_ct_phastv6officialfilt2_chrIV.9910 + 8 2.22e-09 AATTAATT GGGTCTCGACACGA AAAACGTGTA
ce6_ct_phastv6officialfilt2_chrIII.2555 + 37 2.98e-09 ACCCATATTG GGGTCTTGCCACGA AACCCCT
ce6_ct_phastv6officialfilt2_chrIII.13436 + 2 3.42e-09 TT GGGTCCCACCACGA AAACCATCT
ce6_ct_phastv6officialfilt2_chrIII.2545 - 7 3.42e-09 CACCGATTTT GGGTCCCACCACGA AATTTGG
ce6_ct_phastv6officialfilt2_chrIV.1423 - 13 3.42e-09 ATAATTT GGGTCCCACCACGA AAACCTTACT
ce6_ct_phastv6officialfilt2_chrIV.4468 - 9 4.41e-09 TTTTCTGAGT TGGTCTCGCCACGA TCTCAGACA
ce6_ct_phastv6officialfilt2_chrIV.1863 + 9 4.91e-09 CTCAATTTT GGGTCTCGAAGCGA AAATTCTGAA
ce6_ct_phastv6officialfilt2_chrIV.1487 + 5 4.91e-09 CCGTT GGGTCTCGAAGCGA TCCA
ce6_ct_phastv6officialfilt2_chrI.14150 + 5 6.02e-09 AATTA GGGTCTCACAACGA AAATGTAC
ce6_ct_phastv6officialfilt2_chrIV.14876 - 8 7.37e-09 AGGAC GGGTTTCGCCGCGA TCGAGTGT
ce6_ct_phastv6officialfilt2_chrV.1698 - 32 1.09e-08 ATCA TGGTCCCGCCACGA AAAATCCAAA
ce6_ct_phastv6officialfilt2_chrIII.5161 + 4 1.33e-08 CGGC TGGTCTCGCAGCGA AGACGGCCTC
ce6_ct_phastv6officialfilt2_chrIII.15858 + 11 1.59e-08 CCGGAAATGT GTGTCTCGCCACGA ACTTTGTGGA
ce6_ct_phastv6officialfilt2_chrIII.1364 + 11 1.75e-08 ATTAATTTTT GGGTCCCGCCACAA AAACTTCC
ce6_ct_phastv6officialfilt2_chrIII.8792 + 5 2.18e-08 GCGGG GGGTCTTGACACGA AAGATAAATG
ce6_ct_phastv6officialfilt2_chrI.14146 + 13 4.42e-08 GTATTTTCGA GGGTCTCGGCTCGA AAACCACTGG
ce6_ct_phastv6officialfilt2_chrI.3637 - 27 7.29e-08 CTT GAGTCTCACCACGA ATACCGTAGT
ce6_ct_phastv6officialfilt2_chrIV.2159 - 13 1.02e-07 AATT GGGTCTCGAAGAGA AAATTTTGGG
ce6_ct_phastv6officialfilt2_chrX.5524 - 3 3.63e-07 CTAGGCCTGT GGGGCTGGCCGCAA GAG
ce6_ct_phastv6officialfilt2_chrX.189 + 24 1.30e-06 AAGCCGAGAG GGGGCTTAACTCGA GCACCGAATA
ce6_ct_phastv6officialfilt2_chrV.10450 + 30 1.30e-06 GTAGTTAAAA GGGTTTTGCAAAGA AAT

Motif 11 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIV.365 2.40e-10

-11
ce6_ct_phastv6officialfilt2_chrIII.13561 5.18e-10

+11
ce6_ct_phastv6officialfilt2_chrII.12272 5.18e-10

-11
ce6_ct_phastv6officialfilt2_chrII.9951 5.18e-10

-11
ce6_ct_phastv6officialfilt2_chrV.4956 5.18e-10

-11
ce6_ct_phastv6officialfilt2_chrI.1600 8.57e-10

-11
ce6_ct_phastv6officialfilt2_chrIII.13524 1.71e-09

-11
ce6_ct_phastv6officialfilt2_chrIV.9910 2.22e-09

+11
ce6_ct_phastv6officialfilt2_chrIII.2555 2.98e-09

+11
ce6_ct_phastv6officialfilt2_chrIII.13436 3.42e-09

+11
ce6_ct_phastv6officialfilt2_chrIII.2545 3.42e-09

-11
ce6_ct_phastv6officialfilt2_chrIV.1423 3.42e-09

-11
ce6_ct_phastv6officialfilt2_chrIV.4468 4.41e-09

-11
ce6_ct_phastv6officialfilt2_chrIV.1863 4.91e-09

+11
ce6_ct_phastv6officialfilt2_chrIV.1487 4.91e-09

+11
ce6_ct_phastv6officialfilt2_chrI.14150 6.02e-09

+11
ce6_ct_phastv6officialfilt2_chrIV.14876 7.37e-09

-11
ce6_ct_phastv6officialfilt2_chrV.1698 1.09e-08

-11
ce6_ct_phastv6officialfilt2_chrIII.5161 1.33e-08

+11
ce6_ct_phastv6officialfilt2_chrIII.15858 1.59e-08

+11
ce6_ct_phastv6officialfilt2_chrIII.1364 1.75e-08

+11
ce6_ct_phastv6officialfilt2_chrIII.8792 2.18e-08

+11
ce6_ct_phastv6officialfilt2_chrI.14146 4.42e-08

+11
ce6_ct_phastv6officialfilt2_chrI.3637 7.29e-08

-11
ce6_ct_phastv6officialfilt2_chrIV.2159 1.02e-07

-11
ce6_ct_phastv6officialfilt2_chrX.5524 3.63e-07

-11
ce6_ct_phastv6officialfilt2_chrX.189 1.30e-06

+11
ce6_ct_phastv6officialfilt2_chrV.10450 1.30e-06

+11
SCALE
| | |
1 25 50

Motif 11 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 11 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 11 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 11 regular-expression

GGGTCTC[GA][CA][CA][AG]CGA

Time 31938.09 secs.

P N
MOTIF 12 width = 18 sites = 20 llr = 384 E-value = 9.3e-049

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
22.2 (bits)
Relative Entropy
27.7 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrII.1691 + 9 9.65e-13 CCAACAGGT CACGGGTTCGACCCCCGG CTCT
ce6_ct_phastv6officialfilt2_chrIV.1300 + 3 7.15e-12 GCT CGGGGGCTCGATCCCCGG AGC
ce6_ct_phastv6officialfilt2_chrIII.2586 + 4 1.79e-11 ACAG CGGGGGCTCGAACCCCGG CG
ce6_ct_phastv6officialfilt2_chrV.15166 - 7 2.05e-11 AGC CCCTGGTTCGACCCCCGC TCAGGCA
ce6_ct_phastv6officialfilt2_chrV.13954 + 2 2.80e-11 GA CTGGGGTTCGATCCCCGC CG
ce6_ct_phastv6officialfilt2_chrI.6720 - 0 4.01e-11 CAGCGGGT CGCTGGTTCGACCCCCAG
ce6_ct_phastv6officialfilt2_chrV.10450 + 0 4.83e-11 CGTTGGTTCGACCCCCGC GCGTAGTTAA
ce6_ct_phastv6officialfilt2_chrII.1622 - 23 5.26e-11 GT CTCGGGTTCGATCCCCAC GGGGGTAAAT
ce6_ct_phastv6officialfilt2_chrIV.1291 + 2 6.04e-11 GT CAGGGGTTCGAACCCCAC AGGTGTCAAT
ce6_ct_phastv6officialfilt2_chrI.13428 + 2 1.85e-10 CA CATAGGTTCGATCCCCGC TGGCGGC
ce6_ct_phastv6officialfilt2_chrV.14998 + 6 4.06e-10 ACAGGA CCAGGGTTCGAACCCCAC TGGGG
ce6_ct_phastv6officialfilt2_chrI.14783 + 9 4.06e-10 TCTAAAGGT CACGGGTTCGTTCCCCAC TAGGTA
ce6_ct_phastv6officialfilt2_chrII.1621 + 1 6.60e-10 C CACAGGTTCAATCCCCGC GGTGGCAACT
ce6_ct_phastv6officialfilt2_chrIII.1357 - 1 2.38e-09 GCACAAGGT CGCAGGTTCGATCCTCAG T
ce6_ct_phastv6officialfilt2_chrII.1699 + 1 2.81e-09 T CATTGGTTCAATCCCCGC TGT
ce6_ct_phastv6officialfilt2_chrI.13222 + 4 1.45e-08 GGTA GGTGGACTCGAACCCCGG TGTTATGTG
ce6_ct_phastv6officialfilt2_chrX.1119 - 5 1.79e-08 CCACA AGCGGGGTCGAACCCTGG TCTTC
ce6_ct_phastv6officialfilt2_chrIII.12042 + 1 2.15e-08 G CGGGGATGCGACACCCAG AGAATAGGTG
ce6_ct_phastv6officialfilt2_chrX.5519 - 1 6.34e-08 GATTGTTTTT CACGTGTGCCACCCGCGC G
ce6_ct_phastv6officialfilt2_chrIII.1354 - 2 1.75e-07 GTCCTCATCA CCAAGGTTCGATTCCTAG AG

Motif 12 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrII.1691 9.65e-13

+12
ce6_ct_phastv6officialfilt2_chrIV.1300 7.15e-12

+12
ce6_ct_phastv6officialfilt2_chrIII.2586 1.79e-11

+12
ce6_ct_phastv6officialfilt2_chrV.15166 2.05e-11

-12
ce6_ct_phastv6officialfilt2_chrV.13954 2.80e-11

+12
ce6_ct_phastv6officialfilt2_chrI.6720 4.01e-11

-12
ce6_ct_phastv6officialfilt2_chrV.10450 4.83e-11

+12
ce6_ct_phastv6officialfilt2_chrII.1622 5.26e-11

-12
ce6_ct_phastv6officialfilt2_chrIV.1291 6.04e-11

+12
ce6_ct_phastv6officialfilt2_chrI.13428 1.85e-10

+12
ce6_ct_phastv6officialfilt2_chrV.14998 4.06e-10

+12
ce6_ct_phastv6officialfilt2_chrI.14783 4.06e-10

+12
ce6_ct_phastv6officialfilt2_chrII.1621 6.60e-10

+12
ce6_ct_phastv6officialfilt2_chrIII.1357 2.38e-09

-12
ce6_ct_phastv6officialfilt2_chrII.1699 2.81e-09

+12
ce6_ct_phastv6officialfilt2_chrI.13222 1.45e-08

+12
ce6_ct_phastv6officialfilt2_chrX.1119 1.79e-08

-12
ce6_ct_phastv6officialfilt2_chrIII.12042 2.15e-08

+12
ce6_ct_phastv6officialfilt2_chrX.5519 6.34e-08

-12
ce6_ct_phastv6officialfilt2_chrIII.1354 1.75e-07

-12
SCALE
| | |
1 25 50

Motif 12 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 12 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 12 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 12 regular-expression

C[GA][CGT][GAT]GGTTCGA[TCA]CCCC[GA][CG]

Time 34487.33 secs.

P N
MOTIF 13 width = 15 sites = 50 llr = 624 E-value = 2.8e-042

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
16.0 (bits)
Relative Entropy
18.0 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIV.15392 - 6 1.49e-10 TT CCACACTCTCTCGCC TATAAT
ce6_ct_phastv6officialfilt2_chrIII.13313 + 3 1.95e-09 TCC CCACACTCTCTCGCT TCT
ce6_ct_phastv6officialfilt2_chrIII.442 - 2 3.33e-09 CTCCGGCATT CCACACTCTCTCGCA CA
ce6_ct_phastv6officialfilt2_chrIII.14088 - 3 1.38e-08 CTCTCAAATC CCACACACTCTCTCT CAA
ce6_ct_phastv6officialfilt2_chrII.5368 + 23 1.38e-08 TCTTCGTCTT GCACACACTCTCTCC TCT
ce6_ct_phastv6officialfilt2_chrIV.14780 - 6 2.58e-08 TCCAAATCAC ACACACTCTCTCACC TCCGCA
ce6_ct_phastv6officialfilt2_chrIV.14221 + 2 2.97e-08 TT TCACACACTCTCTCC GTAGCGGGTC
ce6_ct_phastv6officialfilt2_chrI.1205 + 15 2.97e-08 CTCGTTTTCT CTGCACTCTCTCACT TTTCCCCACT
ce6_ct_phastv6officialfilt2_chrV.1544 - 0 3.98e-08 CTAGCTTCT CTGCGCTCTCTCACT
ce6_ct_phastv6officialfilt2_chrIV.15324 - 5 4.67e-08 TCTCAATTCT ACACACTCTCTCGTC ACATC
ce6_ct_phastv6officialfilt2_chrIV.1075 + 25 4.67e-08 TCTCACTCTT ACACACTCTCTCGTC
ce6_ct_phastv6officialfilt2_chrIII.14621 + 0 8.00e-08 TCACGCTCTCTCTCT TTCTTGGCTC
ce6_ct_phastv6officialfilt2_chrX.5445 - 39 1.19e-07 CTAGTTTATG GCGCGCTCTCACACC TATCGGAATG
ce6_ct_phastv6officialfilt2_chrV.15302 - 2 1.50e-07 CCTCCTTTCT CTGCGCTCTCTCTCG TT
ce6_ct_phastv6officialfilt2_chrIII.2738 + 12 2.12e-07 TTCATTTTCT CAGCACTCTCTCATC CCAA
ce6_ct_phastv6officialfilt2_chrI.9498 - 1 2.12e-07 CATC TCACACTCTCTCTTT T
ce6_ct_phastv6officialfilt2_chrIII.13864 + 51 2.39e-07 TCCACAAATC ACACGCTCTCTCGTT GAC
ce6_ct_phastv6officialfilt2_chrIV.4093 - 5 2.39e-07 TTCGTCTTCA CCACTCTCTCTCTCT TTGAA
ce6_ct_phastv6officialfilt2_chrI.15272 - 24 2.39e-07 CCACACTATCTCGTC CGATGGATTT
ce6_ct_phastv6officialfilt2_chrIV.8792 - 15 3.38e-07 AAATGTTTCT CTGCACCCTCTCACT TTCCTATACT
ce6_ct_phastv6officialfilt2_chrI.14140 - 3 4.19e-07 TCTCACATTC CCACACTGTCTCTTA TCA
ce6_ct_phastv6officialfilt2_chrII.10076 - 3 5.20e-07 GTCTCTCAAT TTACACACTCTCTTC TTC
ce6_ct_phastv6officialfilt2_chrV.14264 + 11 5.70e-07 TCTCGTTTCT CTGCGCTCTCTCGAA ATTTCA
ce6_ct_phastv6officialfilt2_chrIV.2822 - 3 6.99e-07 TCTTCTTTCT TTGCACTCTCTCATT GTG
ce6_ct_phastv6officialfilt2_chrIV.15243 - 4 7.73e-07 TCTTTATTTT CCATACTCTCTCATT TTTA
ce6_ct_phastv6officialfilt2_chrII.13309 - 0 7.73e-07 TCTTCGTCTC CCATACTCTCTCTCG
ce6_ct_phastv6officialfilt2_chrII.1552 - 23 7.73e-07 CTGCTTCTC TAGCGCACTCTCTCC AATCCCCACA
ce6_ct_phastv6officialfilt2_chrX.3173 - 13 7.73e-07 C TCGCGCAGTCTCGCA TCGATTTTCC
ce6_ct_phastv6officialfilt2_chrV.14231 + 16 7.73e-07 CTCTCGTCGT CTGCACTCTCTTACC C
ce6_ct_phastv6officialfilt2_chrIII.7607 - 99 8.50e-07 GGCTCGTTTT GCGCGCCGTCTCACC AACGGCTCCG
ce6_ct_phastv6officialfilt2_chrI.14140 - 21 8.50e-07 T CTGTACTCTCTCACA TTCCCACACT
ce6_ct_phastv6officialfilt2_chrX.5517 - 15 1.04e-06 GTGCCTGGTA CCGCGCACTCTTTTC TACACGCATG
ce6_ct_phastv6officialfilt2_chrII.4195 - 5 1.14e-06 TTTT CCGCGGACTCTCTCT GCCTC
ce6_ct_phastv6officialfilt2_chrI.3698 + 21 1.26e-06 TCTGCGATTT GTGTGCTCTCTCGTC CTCC
ce6_ct_phastv6officialfilt2_chrIII.15345 - 3 1.52e-06 CTCTGCTTCT CTAAACTCTCTCTCA CTC
ce6_ct_phastv6officialfilt2_chrX.13374 + 8 2.18e-06 ACTTGATT ACGCACACTCTCTAA GTTAGTGAGT
ce6_ct_phastv6officialfilt2_chrX.15495 + 33 2.60e-06 TAAAACAAAA GAGCACTCGCTCGCC GTT
ce6_ct_phastv6officialfilt2_chrX.5095 + 39 2.60e-06 CCTCTTCCCC CCAAACTGTCTCATC TCCCTTCGTC
ce6_ct_phastv6officialfilt2_chrI.13708 + 20 2.83e-06 TCTCAATTTT GTGTACTCTCTCGTT GTG
ce6_ct_phastv6officialfilt2_chrIV.4655 + 18 3.34e-06 TCTCTTCATC TTACACAGTCTCTTC TAC
ce6_ct_phastv6officialfilt2_chrII.1552 - 3 3.34e-06 TCTCCAATCC CCACACTATCTCGAT CCT
ce6_ct_phastv6officialfilt2_chrIV.14758 - 2 4.29e-06 CACTGATTTA ATGCTCTCTCTCTCA GA
ce6_ct_phastv6officialfilt2_chrX.10527 + 53 4.64e-06 GATCCGAGTA GTGAGCACTCTCTCT
ce6_ct_phastv6officialfilt2_chrII.7088 + 1 5.44e-06 A TCATACACTCTCTTA TAACCTCTTC
ce6_ct_phastv6officialfilt2_chrII.1598 - 2 5.44e-06 CTAACTGT CTAAACACTCTCCCC CT
ce6_ct_phastv6officialfilt2_chrV.3312 + 48 6.35e-06 CCAAGGAGCA CCACACACACACGAC CCGGGAGCAA
ce6_ct_phastv6officialfilt2_chrIV.6070 + 7 7.95e-06 CCATCGG CCACACACACACATA TTTCTTTCTT
ce6_ct_phastv6officialfilt2_chrI.14502 + 29 7.95e-06 TCTTCATTTC ATACACTATCTCATC TCT
ce6_ct_phastv6officialfilt2_chrII.1912 - 28 1.22e-05 ACTT TCACACACACACACA CTCTCTCTCT
ce6_ct_phastv6officialfilt2_chrX.2065 + 12 1.72e-05 ATTTGAACAA GCACACACACACATA CACAAAACC

Motif 13 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIV.15392 1.49e-10

-13
ce6_ct_phastv6officialfilt2_chrIII.13313 1.95e-09

+13
ce6_ct_phastv6officialfilt2_chrIII.442 3.33e-09

-13
ce6_ct_phastv6officialfilt2_chrIII.14088 1.38e-08

-13
ce6_ct_phastv6officialfilt2_chrII.5368 1.38e-08

+13
ce6_ct_phastv6officialfilt2_chrIV.14780 2.58e-08

-13
ce6_ct_phastv6officialfilt2_chrIV.14221 2.97e-08

+13
ce6_ct_phastv6officialfilt2_chrI.1205 2.97e-08

+13
ce6_ct_phastv6officialfilt2_chrV.1544 3.98e-08

-13
ce6_ct_phastv6officialfilt2_chrIV.15324 4.67e-08

-13
ce6_ct_phastv6officialfilt2_chrIV.1075 4.67e-08

+13
ce6_ct_phastv6officialfilt2_chrIII.14621 8.00e-08

+13
ce6_ct_phastv6officialfilt2_chrX.5445 1.19e-07

-13
ce6_ct_phastv6officialfilt2_chrV.15302 1.50e-07

-13
ce6_ct_phastv6officialfilt2_chrIII.2738 2.12e-07

+13
ce6_ct_phastv6officialfilt2_chrI.9498 2.12e-07

-13
ce6_ct_phastv6officialfilt2_chrIII.13864 2.39e-07

+13
ce6_ct_phastv6officialfilt2_chrIV.4093 2.39e-07

-13
ce6_ct_phastv6officialfilt2_chrI.15272 2.39e-07

-13
ce6_ct_phastv6officialfilt2_chrIV.8792 3.38e-07

-13
ce6_ct_phastv6officialfilt2_chrI.14140 4.19e-07

-13
-13
ce6_ct_phastv6officialfilt2_chrII.10076 5.20e-07

-13
ce6_ct_phastv6officialfilt2_chrV.14264 5.70e-07

+13
ce6_ct_phastv6officialfilt2_chrIV.2822 6.99e-07

-13
ce6_ct_phastv6officialfilt2_chrIV.15243 7.73e-07

-13
ce6_ct_phastv6officialfilt2_chrII.13309 7.73e-07

-13
ce6_ct_phastv6officialfilt2_chrII.1552 7.73e-07

-13
-13
ce6_ct_phastv6officialfilt2_chrX.3173 7.73e-07

-13
ce6_ct_phastv6officialfilt2_chrV.14231 7.73e-07

+13
ce6_ct_phastv6officialfilt2_chrIII.7607 8.50e-07

-13
ce6_ct_phastv6officialfilt2_chrX.5517 1.04e-06

-13
ce6_ct_phastv6officialfilt2_chrII.4195 1.14e-06

-13
ce6_ct_phastv6officialfilt2_chrI.3698 1.26e-06

+13
ce6_ct_phastv6officialfilt2_chrIII.15345 1.52e-06

-13
ce6_ct_phastv6officialfilt2_chrX.13374 2.18e-06

+13
ce6_ct_phastv6officialfilt2_chrX.15495 2.60e-06

+13
ce6_ct_phastv6officialfilt2_chrX.5095 2.60e-06

+13
ce6_ct_phastv6officialfilt2_chrI.13708 2.83e-06

+13
ce6_ct_phastv6officialfilt2_chrIV.4655 3.34e-06

+13
ce6_ct_phastv6officialfilt2_chrIV.14758 4.29e-06

-13
ce6_ct_phastv6officialfilt2_chrX.10527 4.64e-06

+13
ce6_ct_phastv6officialfilt2_chrII.7088 5.44e-06

+13
ce6_ct_phastv6officialfilt2_chrII.1598 5.44e-06

-13
ce6_ct_phastv6officialfilt2_chrV.3312 6.35e-06

+13
ce6_ct_phastv6officialfilt2_chrIV.6070 7.95e-06

+13
ce6_ct_phastv6officialfilt2_chrI.14502 7.95e-06

+13
ce6_ct_phastv6officialfilt2_chrII.1912 1.22e-05

-13
ce6_ct_phastv6officialfilt2_chrX.2065 1.72e-05

+13
SCALE
| | | | | | |
1 25 50 75 100 125 150

Motif 13 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 13 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 13 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 13 regular-expression

[CT][CT][AG]C[AG]C[TA]CTCTC[TAG][CT][CTA]

Time 37039.56 secs.

P N
MOTIF 14 width = 15 sites = 46 llr = 555 E-value = 3.4e-028

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
12.6 (bits)
Relative Entropy
17.4 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIV.15639 + 0 5.43e-09 CGTGACGGTGTTTGC ACACGACG
ce6_ct_phastv6officialfilt2_chrIV.6042 + 37 5.43e-09 TGCATTTCGA CGTGACGGTGTTTGC ACAGCG
ce6_ct_phastv6officialfilt2_chrV.15001 - 5 5.43e-09 TGCATTCTGA CGTGACGGTGTTTGC GGACA
ce6_ct_phastv6officialfilt2_chrIV.8941 + 17 1.20e-08 TGTACTTTTA CGTGGTGGTGTTTGC ACACATTGCA
ce6_ct_phastv6officialfilt2_chrII.2246 + 25 1.49e-08 TGCAGTTTCG CCGCGCGGTGTTTGC GGACATTTGA
ce6_ct_phastv6officialfilt2_chrI.13190 - 7 1.77e-08 TGCATTTTGA CGTGAGGGTGTTTGC GTACTGG
ce6_ct_phastv6officialfilt2_chrIII.10881 + 5 2.06e-08 TTTTG CGTCGCCGTGTTGGC ACTAAAGTGA
ce6_ct_phastv6officialfilt2_chrI.6557 - 7 2.49e-08 CGTCACCGTGTTTGC ACAAAAA
ce6_ct_phastv6officialfilt2_chrIV.4109 - 9 3.36e-08 TTTTC CGTCGAGGTGTTTGC ACACAATTG
ce6_ct_phastv6officialfilt2_chrIV.6593 + 19 4.03e-08 TGTGAAATTG CGTCTCGGTGTTTGC ACACTTTCG
ce6_ct_phastv6officialfilt2_chrX.4805 + 24 4.03e-08 TGCATTAGTA CGTCATGGTGTTTGC ACCAT
ce6_ct_phastv6officialfilt2_chrI.11780 - 10 4.03e-08 CGTAGTTTTG CGTCATGGTGTTTGC AGAAATCCGG
ce6_ct_phastv6officialfilt2_chrI.3230 + 16 5.42e-08 TGCATTCTAC CGTGATGGTGTTTGC ACACATTT
ce6_ct_phastv6officialfilt2_chrII.9737 - 11 9.56e-08 TGCATTTGAG CGCCACGGTGTTTGC ACAATGTGTC
ce6_ct_phastv6officialfilt2_chrX.2029 + 20 2.92e-07 GCTATCAGTG CGTGGGGGGGGGTGG GAGGTTTTAG
ce6_ct_phastv6officialfilt2_chrIII.6743 - 5 3.30e-07 CGTACCGGTGTTTGC GGGGT
ce6_ct_phastv6officialfilt2_chrII.629 - 0 3.30e-07 GGCGCGGTCG CGTCGCGGTTTTTGC
ce6_ct_phastv6officialfilt2_chrI.11433 + 22 5.08e-07 GCGGTTTTCG CGGGGAGGGGTCTCG CAAC
ce6_ct_phastv6officialfilt2_chrIII.5977 - 3 6.94e-07 ACGGCGGAAC CCGCGAGGTGTCGGG AGT
ce6_ct_phastv6officialfilt2_chrX.5095 + 115 7.64e-07 GGCTTTTTGT CGGCCCGCTGTTTCG AATGCACTAG
ce6_ct_phastv6officialfilt2_chrIII.2689 - 20 9.34e-07 TTTGT CGTCACGGTGTACCG CATGCACACA
ce6_ct_phastv6officialfilt2_chrIV.15041 + 23 1.02e-06 TGCATTTTCG CGTGCCGGTGTTTAC A
ce6_ct_phastv6officialfilt2_chrX.7781 - 22 1.13e-06 GTCTTTGATG CGGTCGCGTGCCTCC TTTAAGATAA
ce6_ct_phastv6officialfilt2_chrII.7075 - 46 1.25e-06 CGGCACGCGGCCTGG TTTCCATTCC
ce6_ct_phastv6officialfilt2_chrX.1320 - 18 1.36e-06 AGGAACGG GGTCAGGCTGCCTGC CACGAAGAAC
ce6_ct_phastv6officialfilt2_chrX.14500 - 69 1.80e-06 GGAAATGCTC GGTAGTGGTGCCTGC TGAAATGCAC
ce6_ct_phastv6officialfilt2_chrX.5612 - 113 1.80e-06 TTCATTTTCA CGTCTTCGTGGCTCG CATTGTTTAC
ce6_ct_phastv6officialfilt2_chrIII.3569 + 6 1.96e-06 TCATTG CGTCGCGGTTGCGCG CTAATTCAAA
ce6_ct_phastv6officialfilt2_chrV.53 - 16 1.96e-06 AACCTGAAGC CGTTCGGGTGCCCCG ACTGATGTTG
ce6_ct_phastv6officialfilt2_chrII.5795 - 32 2.15e-06 TTTTCTTCAG CGTTAGCGTGGCTCG TCTTGCGGCG
ce6_ct_phastv6officialfilt2_chrX.7341 + 19 2.56e-06 TCTGTGTCGT CGTCGTCGAGTCTCC CCCAATCATT
ce6_ct_phastv6officialfilt2_chrX.4291 - 4 2.56e-06 A CCGCTGGGTGTGTCC CCTT
ce6_ct_phastv6officialfilt2_chrIII.2390 + 11 3.05e-06 GATTTTTGGG GGGGGGGGGGTCTGA AATTTGAAAA
ce6_ct_phastv6officialfilt2_chrX.11827 - 5 4.62e-06 TGACGACCGA GCGCCTGGTGGGTGG GCAAA
ce6_ct_phastv6officialfilt2_chrX.5517 - 32 5.02e-06 TCAGCAAACC GCTGTCCGTGCCTGG TACCGCGCAC
ce6_ct_phastv6officialfilt2_chrIV.1550 + 21 5.43e-06 TATGAAGGTG CGTGGTCGCGGACGC GGAACCGCGC
ce6_ct_phastv6officialfilt2_chrV.3337 + 23 5.88e-06 GGCTGACACG GCTCGAGGTGCCGCG TA
ce6_ct_phastv6officialfilt2_chrII.8190 + 45 6.37e-06 TTATGTGTGC AGTGGCGGTGTACGC AC
ce6_ct_phastv6officialfilt2_chrIII.11658 - 30 8.03e-06 GACAGC GGTGGTGGTGGTGGA CTGATCGGTT
ce6_ct_phastv6officialfilt2_chrX.4155 + 47 8.03e-06 TGAGATGTGT GTGGATGGTGTCTGC ATGCGCATAC
ce6_ct_phastv6officialfilt2_chrIII.7340 + 12 9.32e-06 CAAATGCAAA CAGGCGCGTGCCCGC GTATTTCAAA
ce6_ct_phastv6officialfilt2_chrII.43 + 25 1.08e-05 TCTAGGACAC CGGTGCCGTGGCGTC TATAAAAGAG
ce6_ct_phastv6officialfilt2_chrX.5792 - 63 1.08e-05 TGGCAATCG GGGGGGGGGGGTACC TCTAATTTTT
ce6_ct_phastv6officialfilt2_chrX.5612 + 37 1.34e-05 CGGTAGGCGT GCTCACGGCGCGCGG AATCTATCGA
ce6_ct_phastv6officialfilt2_chrI.11616 - 8 2.49e-05 GCGCTG CGGTCACGCGTCGCG TGCGTTTT
ce6_ct_phastv6officialfilt2_chrV.3725 + 22 2.65e-05 CGGATCCTTC CGCGCGCGCGGATCG TC

Motif 14 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIV.15639 5.43e-09

+14
ce6_ct_phastv6officialfilt2_chrIV.6042 5.43e-09

+14
ce6_ct_phastv6officialfilt2_chrV.15001 5.43e-09

-14
ce6_ct_phastv6officialfilt2_chrIV.8941 1.20e-08

+14
ce6_ct_phastv6officialfilt2_chrII.2246 1.49e-08

+14
ce6_ct_phastv6officialfilt2_chrI.13190 1.77e-08

-14
ce6_ct_phastv6officialfilt2_chrIII.10881 2.06e-08

+14
ce6_ct_phastv6officialfilt2_chrI.6557 2.49e-08

-14
ce6_ct_phastv6officialfilt2_chrIV.4109 3.36e-08

-14
ce6_ct_phastv6officialfilt2_chrIV.6593 4.03e-08

+14
ce6_ct_phastv6officialfilt2_chrX.4805 4.03e-08

+14
ce6_ct_phastv6officialfilt2_chrI.11780 4.03e-08

-14
ce6_ct_phastv6officialfilt2_chrI.3230 5.42e-08

+14
ce6_ct_phastv6officialfilt2_chrII.9737 9.56e-08

-14
ce6_ct_phastv6officialfilt2_chrX.2029 2.92e-07

+14
ce6_ct_phastv6officialfilt2_chrIII.6743 3.30e-07

-14
ce6_ct_phastv6officialfilt2_chrII.629 3.30e-07

-14
ce6_ct_phastv6officialfilt2_chrI.11433 5.08e-07

+14
ce6_ct_phastv6officialfilt2_chrIII.5977 6.94e-07

-14
ce6_ct_phastv6officialfilt2_chrX.5095 7.64e-07

+14
ce6_ct_phastv6officialfilt2_chrIII.2689 9.34e-07

-14
ce6_ct_phastv6officialfilt2_chrIV.15041 1.02e-06

+14
ce6_ct_phastv6officialfilt2_chrX.7781 1.13e-06

-14
ce6_ct_phastv6officialfilt2_chrII.7075 1.25e-06

-14
ce6_ct_phastv6officialfilt2_chrX.1320 1.36e-06

-14
ce6_ct_phastv6officialfilt2_chrX.14500 1.80e-06

-14
ce6_ct_phastv6officialfilt2_chrX.5612 1.80e-06

+14
-14
ce6_ct_phastv6officialfilt2_chrIII.3569 1.96e-06

+14
ce6_ct_phastv6officialfilt2_chrV.53 1.96e-06

-14
ce6_ct_phastv6officialfilt2_chrII.5795 2.15e-06

-14
ce6_ct_phastv6officialfilt2_chrX.7341 2.56e-06

+14
ce6_ct_phastv6officialfilt2_chrX.4291 2.56e-06

-14
ce6_ct_phastv6officialfilt2_chrIII.2390 3.05e-06

+14
ce6_ct_phastv6officialfilt2_chrX.11827 4.62e-06

-14
ce6_ct_phastv6officialfilt2_chrX.5517 5.02e-06

-14
ce6_ct_phastv6officialfilt2_chrIV.1550 5.43e-06

+14
ce6_ct_phastv6officialfilt2_chrV.3337 5.88e-06

+14
ce6_ct_phastv6officialfilt2_chrII.8190 6.37e-06

+14
ce6_ct_phastv6officialfilt2_chrIII.11658 8.03e-06

-14
ce6_ct_phastv6officialfilt2_chrX.4155 8.03e-06

+14
ce6_ct_phastv6officialfilt2_chrIII.7340 9.32e-06

+14
ce6_ct_phastv6officialfilt2_chrII.43 1.08e-05

+14
ce6_ct_phastv6officialfilt2_chrX.5792 1.08e-05

-14
ce6_ct_phastv6officialfilt2_chrI.11616 2.49e-05

-14
ce6_ct_phastv6officialfilt2_chrV.3725 2.65e-05

+14
SCALE
| | | | | | | |
1 25 50 75 100 125 150

Motif 14 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 14 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 14 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 14 regular-expression

[CG]G[TG][CG][GA][CGT][GC]GTG[TG][TC]T[GC][CG]

Time 39859.41 secs.

P N
MOTIF 15 width = 18 sites = 50 llr = 664 E-value = 2.4e-053

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
18.2 (bits)
Relative Entropy
19.2 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIII.624 - 13 1.60e-10 AA AGGAGAAGAAGAAGAAGA CACACCCAGA
ce6_ct_phastv6officialfilt2_chrX.14502 - 22 2.23e-10 GAAGTGA GGAAGAAGAAGAAGAAGA TGTCATATAT
ce6_ct_phastv6officialfilt2_chrIII.180 + 6 3.23e-10 CGAGGC AGCAGAAGAAGAAGAAGA AGCCGTTA
ce6_ct_phastv6officialfilt2_chrV.12976 + 39 8.93e-10 ACATGGATGG CGCAGGAGAAGAAGGAGA A
ce6_ct_phastv6officialfilt2_chrX.13904 + 35 1.31e-09 GATGAGGCGG AGGAGGAGAAGGAGGAGA CGA
ce6_ct_phastv6officialfilt2_chrV.8495 - 12 1.55e-09 GAGATGAAGC CGAAGAAGAAGAAGAAGA AGTATACTTT
ce6_ct_phastv6officialfilt2_chrI.9054 + 2 6.01e-09 AA AAGAGAAGAAGAAGAAGC TTTGTATGGG
ce6_ct_phastv6officialfilt2_chrII.6619 + 7 7.31e-09 TGAAGAA AAAAGAAGAAGAAGGAGA CGTCGTCGTG
ce6_ct_phastv6officialfilt2_chrIV.5515 + 2 8.95e-09 TT AACAGAAGAAGAAGAAGC CAAAAG
ce6_ct_phastv6officialfilt2_chrIII.9994 - 5 1.04e-08 GCGACGACGG AGGAGACGAAGAAGAAGA TGCTG
ce6_ct_phastv6officialfilt2_chrIII.3114 + 66 1.78e-08 ACGGAAAATA CGAAGAAGACGAAGAAGA AGACGACG
ce6_ct_phastv6officialfilt2_chrI.11535 + 8 2.48e-08 AAGTGAAA AGAAGGAGAAGCAGCAGC AGT
ce6_ct_phastv6officialfilt2_chrII.3128 + 8 4.02e-08 GAGAAAAA AAAAGAAAAAGAAGAAGA CATTTTCGTG
ce6_ct_phastv6officialfilt2_chrX.13729 - 106 4.55e-08 CGAT GGAAGAGAAAGGAGAAGA AGACCAATTG
ce6_ct_phastv6officialfilt2_chrII.3947 - 30 5.06e-08 AGAAGAAGAAGAAGAGCC GAAAAGTTGT
ce6_ct_phastv6officialfilt2_chrX.11579 - 14 1.43e-07 TGTGTGAAAA AGCAGGAAAAGACGGAAA GTGACATAGA
ce6_ct_phastv6officialfilt2_chrX.12869 - 3 1.56e-07 TATAGTGAAA AAAAGAAGAAGAAGAGCA GTA
ce6_ct_phastv6officialfilt2_chrX.9814 + 17 1.72e-07 TGAGGCAACA AGCAGAAGAAAAAGAGGC GAGAGAAAGA
ce6_ct_phastv6officialfilt2_chrV.3653 - 49 1.94e-07 GGAGAAATGA GGGAGAGAAAGACGAAAA ATAGTGTAAT
ce6_ct_phastv6officialfilt2_chrII.13770 - 10 2.17e-07 AGAAGAAGAAGAAGACAC ATGCTTTTGA
ce6_ct_phastv6officialfilt2_chrIV.6102 - 9 2.59e-07 GAACAAAGAC GGAAGAAGGCGAAAAAGA AATCATTAT
ce6_ct_phastv6officialfilt2_chrIV.5963 + 29 3.22e-07 TCTTTTTTTT GGAAGAAAAAGGAGGGGG TCTACGACGT
ce6_ct_phastv6officialfilt2_chrX.6741 - 17 3.22e-07 AGGAAAAATG GGCAGAAAAGGAAGGGAA ATATCCTATT
ce6_ct_phastv6officialfilt2_chrII.13252 - 20 3.56e-07 ATGATTATTT AGAAGAAGAAGATGAAAA AGCGAGAAAA
ce6_ct_phastv6officialfilt2_chrI.2733 + 2 3.89e-07 GA CACAGGAGAAGAAGCAAC GTT
ce6_ct_phastv6officialfilt2_chrX.15614 - 16 4.25e-07 GGGAGAAGGGGGTGGAGA CAAAAAGGAA
ce6_ct_phastv6officialfilt2_chrX.7486 - 33 4.25e-07 AAGACATAAA ACAAGGAGAAGAAGGCGA CTGGAAAGGC
ce6_ct_phastv6officialfilt2_chrIII.13517 - 8 4.72e-07 AGCGCGCGG CACAGAAAAAGAGGCGGA GCCTGATT
ce6_ct_phastv6officialfilt2_chrII.4431 + 2 5.23e-07 GA AGCAGAAGAATAAGACGA ATTGTTTTGA
ce6_ct_phastv6officialfilt2_chrV.2594 + 0 5.23e-07 AGGAGAAAACGAAACGGA GTAAAAACGA
ce6_ct_phastv6officialfilt2_chrV.2218 - 24 6.23e-07 T GGAGAGAGAAGCAGAGGA TCTGGTTTCT
ce6_ct_phastv6officialfilt2_chrX.6184 + 14 6.81e-07 CGCGTAGAAG CGGAAAAAGAGAAGAAGC CCTAACCATG
ce6_ct_phastv6officialfilt2_chrI.836 + 9 9.72e-07 GTGAAAAAG AAGAAAAAAAGACGAGGC G
ce6_ct_phastv6officialfilt2_chrIII.6988 - 10 1.06e-06 GAAAATGA GGAGGAGGAGGAAAAAGA AAAACTGATT
ce6_ct_phastv6officialfilt2_chrIV.7249 - 26 1.06e-06 GGGTAG AGGAGGCGAAAACGAGGA AAACGACGTA
ce6_ct_phastv6officialfilt2_chrII.10055 - 56 1.27e-06 GAG GGAAGGAGAAGCCAGAAA AATGGATGAA
ce6_ct_phastv6officialfilt2_chrI.12166 - 8 1.27e-06 CCTCCCCCAA GAGAGAGAAGGGCGGGGC AGGTGAAT
ce6_ct_phastv6officialfilt2_chrX.7585 - 18 1.38e-06 TTGGAGCG GAAGGGGGAAGATGCAGA AAAGGTGATT
ce6_ct_phastv6officialfilt2_chrIV.2412 - 27 1.62e-06 GGAAAGAGT GGGGGGAAAACGAGGGGA CTCTCTCCTT
ce6_ct_phastv6officialfilt2_chrII.6495 - 36 1.62e-06 TAAA AGAAAAAGGAGACAAGGA AAAAGGAAAG
ce6_ct_phastv6officialfilt2_chrX.7045 + 39 1.78e-06 TTTACCTCGC GACAGGAGGAGAAAAGCA ATGATAATAA
ce6_ct_phastv6officialfilt2_chrIII.3115 + 25 1.93e-06 GACGCAGAGA AACAGAGAAAGACAGAGC ACT
ce6_ct_phastv6officialfilt2_chrIV.4408 - 36 2.24e-06 CCGAAGAAAA TGGAGGAAACGGCGAAGA AAAACGGATA
ce6_ct_phastv6officialfilt2_chrII.12001 + 27 2.24e-06 TAGAGTGTAT GAGATGAAGAGACGCAGA AATC
ce6_ct_phastv6officialfilt2_chrII.2814 + 15 2.24e-06 AATAGTGTGG GAGATGAAGAGACGCAGA GATTACCG
ce6_ct_phastv6officialfilt2_chrX.3407 - 64 2.24e-06 ATGCGCAAAT GAGACGAGAAGAAGCAAA TCGTCAGCGT
ce6_ct_phastv6officialfilt2_chrV.15409 + 49 2.65e-06 GGTTTAGTGT AGAGAAAGGAGCAGAAGC CG
ce6_ct_phastv6officialfilt2_chrI.13686 + 1 2.65e-06 A GACAGAGAAAGAGAGAGA GAGATACGCA
ce6_ct_phastv6officialfilt2_chrX.2473 + 8 2.86e-06 AAATGGGA AGAATAAGAATAAGAAGA AGAATAACGT
ce6_ct_phastv6officialfilt2_chrIII.15031 + 0 5.98e-06 CATAGAAAAAGAGGCGGA GCGTAATTTT

Motif 15 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIII.624 1.60e-10

-15
ce6_ct_phastv6officialfilt2_chrX.14502 2.23e-10

-15
ce6_ct_phastv6officialfilt2_chrIII.180 3.23e-10

+15
ce6_ct_phastv6officialfilt2_chrV.12976 8.93e-10

+15
ce6_ct_phastv6officialfilt2_chrX.13904 1.31e-09

+15
ce6_ct_phastv6officialfilt2_chrV.8495 1.55e-09

-15
ce6_ct_phastv6officialfilt2_chrI.9054 6.01e-09

+15
ce6_ct_phastv6officialfilt2_chrII.6619 7.31e-09

+15
ce6_ct_phastv6officialfilt2_chrIV.5515 8.95e-09

+15
ce6_ct_phastv6officialfilt2_chrIII.9994 1.04e-08

-15
ce6_ct_phastv6officialfilt2_chrIII.3114 1.78e-08

+15
ce6_ct_phastv6officialfilt2_chrI.11535 2.48e-08

+15
ce6_ct_phastv6officialfilt2_chrII.3128 4.02e-08

+15
ce6_ct_phastv6officialfilt2_chrX.13729 4.55e-08

-15
ce6_ct_phastv6officialfilt2_chrII.3947 5.06e-08

-15
ce6_ct_phastv6officialfilt2_chrX.11579 1.43e-07

-15
ce6_ct_phastv6officialfilt2_chrX.12869 1.56e-07

-15
ce6_ct_phastv6officialfilt2_chrX.9814 1.72e-07

+15
ce6_ct_phastv6officialfilt2_chrV.3653 1.94e-07

-15
ce6_ct_phastv6officialfilt2_chrII.13770 2.17e-07

-15
ce6_ct_phastv6officialfilt2_chrIV.6102 2.59e-07

-15
ce6_ct_phastv6officialfilt2_chrIV.5963 3.22e-07

+15
ce6_ct_phastv6officialfilt2_chrX.6741 3.22e-07

-15
ce6_ct_phastv6officialfilt2_chrII.13252 3.56e-07

-15
ce6_ct_phastv6officialfilt2_chrI.2733 3.89e-07

+15
ce6_ct_phastv6officialfilt2_chrX.15614 4.25e-07

-15
ce6_ct_phastv6officialfilt2_chrX.7486 4.25e-07

-15
ce6_ct_phastv6officialfilt2_chrIII.13517 4.72e-07

-15
ce6_ct_phastv6officialfilt2_chrII.4431 5.23e-07

+15
ce6_ct_phastv6officialfilt2_chrV.2594 5.23e-07

+15
ce6_ct_phastv6officialfilt2_chrV.2218 6.23e-07

-15
ce6_ct_phastv6officialfilt2_chrX.6184 6.81e-07

+15
ce6_ct_phastv6officialfilt2_chrI.836 9.72e-07

+15
ce6_ct_phastv6officialfilt2_chrIII.6988 1.06e-06

-15
ce6_ct_phastv6officialfilt2_chrIV.7249 1.06e-06

-15
ce6_ct_phastv6officialfilt2_chrII.10055 1.27e-06

-15
ce6_ct_phastv6officialfilt2_chrI.12166 1.27e-06

-15
ce6_ct_phastv6officialfilt2_chrX.7585 1.38e-06

-15
ce6_ct_phastv6officialfilt2_chrIV.2412 1.62e-06

-15
ce6_ct_phastv6officialfilt2_chrII.6495 1.62e-06

-15
ce6_ct_phastv6officialfilt2_chrX.7045 1.78e-06

+15
ce6_ct_phastv6officialfilt2_chrIII.3115 1.93e-06

+15
ce6_ct_phastv6officialfilt2_chrIV.4408 2.24e-06

-15
ce6_ct_phastv6officialfilt2_chrII.12001 2.24e-06

+15
ce6_ct_phastv6officialfilt2_chrII.2814 2.24e-06

+15
ce6_ct_phastv6officialfilt2_chrX.3407 2.24e-06

-15
ce6_ct_phastv6officialfilt2_chrV.15409 2.65e-06

+15
ce6_ct_phastv6officialfilt2_chrI.13686 2.65e-06

+15
ce6_ct_phastv6officialfilt2_chrX.2473 2.86e-06

+15
ce6_ct_phastv6officialfilt2_chrIII.15031 5.98e-06

+15
SCALE
| | | | | |
1 25 50 75 100 125

Motif 15 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 15 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 15 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 15 regular-expression

[AG][GA][AGC]AG[AG]A[GA]AAGA[AC]G[AG][AG]G[AC]

Time 42360.50 secs.

P N
MOTIF 16 width = 11 sites = 31 llr = 441 E-value = 5.4e-041

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
20.1 (bits)
Relative Entropy
20.5 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIII.5898 + 14 1.66e-07 GATTTACGGG TGCGCCTTTAA ACTTT
ce6_ct_phastv6officialfilt2_chrIII.1839 + 8 1.66e-07 TCGAGTGC TGCGCCTTTAA AGA
ce6_ct_phastv6officialfilt2_chrIV.7593 + 5 1.66e-07 ATGCA TGCGCCTTTAA ACGTT
ce6_ct_phastv6officialfilt2_chrIV.3779 - 2 1.66e-07 GCCGTCTC TGCGCCTTTAA CC
ce6_ct_phastv6officialfilt2_chrII.11913 - 19 1.66e-07 GACGTG TGCGCCTTTAA GCGGAGTACG
ce6_ct_phastv6officialfilt2_chrX.59 + 5 1.66e-07 AGTAC TGCGCCTTTAA AAACTACC
ce6_ct_phastv6officialfilt2_chrV.15410 - 25 1.66e-07 ATAGCG TGCGCCTTTAA CATTTCTCGT
ce6_ct_phastv6officialfilt2_chrV.14693 + 9 1.66e-07 ATTGTGCAA TGCGCCTTTAA AGCTA
ce6_ct_phastv6officialfilt2_chrV.14690 - 26 1.66e-07 GTTA TGCGCCTTTAA ACCGACCGTA
ce6_ct_phastv6officialfilt2_chrV.5080 - 6 1.66e-07 ATGCA TGCGCCTTTAA CATAGA
ce6_ct_phastv6officialfilt2_chrV.499 + 31 1.66e-07 AATTTTTGTA TGCGCCTTTAA GG
ce6_ct_phastv6officialfilt2_chrI.15033 + 5 1.66e-07 ATCCA TGCGCCTTTAA GAAAGTTCA
ce6_ct_phastv6officialfilt2_chrI.13514 + 5 1.66e-07 ATCCA TGCGCCTTTAA TTTATCAATC
ce6_ct_phastv6officialfilt2_chrI.12959 + 6 1.66e-07 AATGTG TGCGCCTTTAA GCA
ce6_ct_phastv6officialfilt2_chrI.5415 + 9 1.66e-07 AAAACTCGA TGCGCCTTTAA TTT
ce6_ct_phastv6officialfilt2_chrI.4184 + 26 1.66e-07 GGAAATTGCA TGCGCCTTTAA ACGATGATAT
ce6_ct_phastv6officialfilt2_chrI.3637 + 1 1.66e-07 C TGCGCCTTTAA ATGTAACTAC
ce6_ct_phastv6officialfilt2_chrI.3058 - 16 1.66e-07 CCGCA TGCGCCTTTAA AAGACTACGG
ce6_ct_phastv6officialfilt2_chrI.2099 + 8 1.66e-07 CACTCCCA TGCGCCTTTAA CCCATTTCTA
ce6_ct_phastv6officialfilt2_chrI.28 + 29 1.66e-07 GAGTCCCACA TGCGCCTTTAA ATATGGTGTA
ce6_ct_phastv6officialfilt2_chrIII.14687 + 4 2.46e-07 AAAA CGCGCCTTTAA TCCCGCG
ce6_ct_phastv6officialfilt2_chrIII.2773 + 19 2.46e-07 AATCGACACG CGCGCCTTTAA CCATGAGTTG
ce6_ct_phastv6officialfilt2_chrII.14096 + 25 4.06e-07 CGGCACTTCA TGCGCCTTTAG TTAATCGCGG
ce6_ct_phastv6officialfilt2_chrI.5799 - 8 4.06e-07 ACCGTAGTCA TGCGCCTTTGA CGCGCTCA
ce6_ct_phastv6officialfilt2_chrIII.14779 + 6 1.10e-06 ACGACA TGTGCCTTTAA AACTACAGTA
ce6_ct_phastv6officialfilt2_chrIII.13008 - 6 1.10e-06 AGAAATGGCG TGCACCTTTAA ACTGAC
ce6_ct_phastv6officialfilt2_chrIII.12616 + 7 1.10e-06 AATTTTA TGCACCTTTAA AATAC
ce6_ct_phastv6officialfilt2_chrIV.2668 + 9 1.10e-06 ATAAATGTG TGTGCCTTTAA GAAAAAAA
ce6_ct_phastv6officialfilt2_chrV.1698 + 10 1.10e-06 TTTCAACCTA TGCACCTTTAA ATTTGGATTT
ce6_ct_phastv6officialfilt2_chrI.12887 - 17 1.10e-06 AGTCGG TGTGCCTTTAA ATTTGTCATC
ce6_ct_phastv6officialfilt2_chrIII.12094 - 5 1.45e-06 AATGAATCCG TGCGTCTTTAA GTTCA

Motif 16 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIII.5898 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrIII.1839 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrIV.7593 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrIV.3779 1.66e-07

-16
ce6_ct_phastv6officialfilt2_chrII.11913 1.66e-07

-16
ce6_ct_phastv6officialfilt2_chrX.59 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrV.15410 1.66e-07

-16
ce6_ct_phastv6officialfilt2_chrV.14693 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrV.14690 1.66e-07

-16
ce6_ct_phastv6officialfilt2_chrV.5080 1.66e-07

-16
ce6_ct_phastv6officialfilt2_chrV.499 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrI.15033 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrI.13514 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrI.12959 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrI.5415 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrI.4184 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrI.3637 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrI.3058 1.66e-07

-16
ce6_ct_phastv6officialfilt2_chrI.2099 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrI.28 1.66e-07

+16
ce6_ct_phastv6officialfilt2_chrIII.14687 2.46e-07

+16
ce6_ct_phastv6officialfilt2_chrIII.2773 2.46e-07

+16
ce6_ct_phastv6officialfilt2_chrII.14096 4.06e-07

+16
ce6_ct_phastv6officialfilt2_chrI.5799 4.06e-07

-16
ce6_ct_phastv6officialfilt2_chrIII.14779 1.10e-06

+16
ce6_ct_phastv6officialfilt2_chrIII.13008 1.10e-06

-16
ce6_ct_phastv6officialfilt2_chrIII.12616 1.10e-06

+16
ce6_ct_phastv6officialfilt2_chrIV.2668 1.10e-06

+16
ce6_ct_phastv6officialfilt2_chrV.1698 1.10e-06

+16
ce6_ct_phastv6officialfilt2_chrI.12887 1.10e-06

-16
ce6_ct_phastv6officialfilt2_chrIII.12094 1.45e-06

-16
SCALE
| | | |
1 25 50 75

Motif 16 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 16 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 16 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 16 regular-expression

TGCGCCTTTAA

Time 44833.29 secs.

P N
MOTIF 17 width = 18 sites = 32 llr = 446 E-value = 8.2e-028

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
16.1 (bits)
Relative Entropy
20.1 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrI.13329 - 9 9.98e-13 ATGCGTTGT CCGAGAGGAGTACACGGC CGAGGATGT
ce6_ct_phastv6officialfilt2_chrIII.3050 + 9 4.62e-12 CTGGTTTGT CCGAGAGGAGTACACGCC G
ce6_ct_phastv6officialfilt2_chrV.14583 + 28 1.21e-09 ACAACTTTGT CCGAGAGGAATACACGCG GT
ce6_ct_phastv6officialfilt2_chrI.4958 - 2 1.21e-09 GGATTGT CCGAGAGGACTACACCAC GT
ce6_ct_phastv6officialfilt2_chrIV.12452 - 0 1.97e-09 GAAAACTTGT CCGCGAGGAGTACACAAG
ce6_ct_phastv6officialfilt2_chrIII.12860 - 3 3.15e-09 ATTAAGTTGC CCGAGAGGAGTACACGGT GAA
ce6_ct_phastv6officialfilt2_chrI.4272 - 0 8.35e-09 TCATTTTGT CCTCGAGGAGTACGCGGC
ce6_ct_phastv6officialfilt2_chrII.7826 + 4 2.63e-08 CGAC GCGCGACGCACACGCAAC GCGTCGC
ce6_ct_phastv6officialfilt2_chrV.7659 - 2 2.96e-08 TTGCTTTTGT CCACGAGAAGTACACAGC GA
ce6_ct_phastv6officialfilt2_chrI.2675 + 29 4.19e-08 ATGCAGTTGA CGGCGAAGAAAACGCGAC GTTC
ce6_ct_phastv6officialfilt2_chrII.1489 + 9 4.69e-08 TTCGATTTT CCGAGAGGAGTACACGTT TTTT
ce6_ct_phastv6officialfilt2_chrII.4212 + 11 9.07e-08 GCGGCGCCAT CGGCCAGAAGAACACTGC CATTG
ce6_ct_phastv6officialfilt2_chrII.12272 - 3 1.01e-07 CGCAGCGAAC GCGCGAAAAATACACAGC TGA
ce6_ct_phastv6officialfilt2_chrX.10553 + 1 1.01e-07 T CGGAGAACCGAACGCTGC ACTGTTTATT
ce6_ct_phastv6officialfilt2_chrI.2447 + 12 1.12e-07 GTTCGCTTGT CCGAGAGGACTACACAAA CC
ce6_ct_phastv6officialfilt2_chrV.8870 - 38 1.84e-07 GCCGAGGAAC CCGAGAAAACCGCGCCGC ACTTTGCGTT
ce6_ct_phastv6officialfilt2_chrV.2897 - 2 1.84e-07 TTAGTTTGT CCGAGAGGAGTACAAATG AC
ce6_ct_phastv6officialfilt2_chrI.7799 + 5 2.46e-07 CACAA CCGCGACGCAACCGCTCG CGATCAAAAG
ce6_ct_phastv6officialfilt2_chrX.7642 + 50 2.71e-07 AAAAATATGG CGGCCTGGAGGACACCTC TCATGGGATT
ce6_ct_phastv6officialfilt2_chrI.5617 + 12 2.97e-07 AAGAAAAAAA CCGAGAAGAAGGCAACGC
ce6_ct_phastv6officialfilt2_chrV.8467 - 24 3.26e-07 AAATGGGAAA GCGATTGGAAGACACTGC GAACTGCAAA
ce6_ct_phastv6officialfilt2_chrIII.7339 + 31 5.10e-07 CGCTGCACAG CCGCGTCGCACGCGACCC GGCTGTGTTG
ce6_ct_phastv6officialfilt2_chrI.14046 + 1 6.06e-07 G CGGACTAGAAAACGCAGC TGAAAAACCT
ce6_ct_phastv6officialfilt2_chrII.5125 + 20 6.60e-07 AAATTTTTTC GCGAGACCCGAACATTCC GTGCGTATGT
ce6_ct_phastv6officialfilt2_chrIII.5755 + 3 1.08e-06 CCA GCGATACGAGAACATTCC TTTTTTTTCG
ce6_ct_phastv6officialfilt2_chrI.15002 - 1 1.17e-06 AATTTGACGA GCAACTGGAACACACTCC T
ce6_ct_phastv6officialfilt2_chrIII.7995 + 8 1.37e-06 CGAAGGAA CCGCTACGCTGACACGCG ACGCACGTCA
ce6_ct_phastv6officialfilt2_chrIV.11430 - 32 1.37e-06 CAG GCGAGTAGCCAACGTAGC CCAAGAAGCA
ce6_ct_phastv6officialfilt2_chrX.15578 - 34 1.72e-06 GATCGAGTAT GCAAGACGCCAACAATCC CATTATATGC
ce6_ct_phastv6officialfilt2_chrIII.12653 - 4 1.99e-06 ACAGG GCACGAGAAGTGCGCCAG CAGC
ce6_ct_phastv6officialfilt2_chrII.14507 - 7 3.27e-06 GAGAAGG CGGAGACACATACACAAA ACCTAGT
ce6_ct_phastv6officialfilt2_chrX.2620 - 9 4.85e-06 AC CGAAGTACCGCACACTAC CACTCAACC

Motif 17 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrI.13329 9.98e-13

-17
ce6_ct_phastv6officialfilt2_chrIII.3050 4.62e-12

+17
ce6_ct_phastv6officialfilt2_chrV.14583 1.21e-09

+17
ce6_ct_phastv6officialfilt2_chrI.4958 1.21e-09

-17
ce6_ct_phastv6officialfilt2_chrIV.12452 1.97e-09

-17
ce6_ct_phastv6officialfilt2_chrIII.12860 3.15e-09

-17
ce6_ct_phastv6officialfilt2_chrI.4272 8.35e-09

-17
ce6_ct_phastv6officialfilt2_chrII.7826 2.63e-08

+17
ce6_ct_phastv6officialfilt2_chrV.7659 2.96e-08

-17
ce6_ct_phastv6officialfilt2_chrI.2675 4.19e-08

+17
ce6_ct_phastv6officialfilt2_chrII.1489 4.69e-08

+17
ce6_ct_phastv6officialfilt2_chrII.4212 9.07e-08

+17
ce6_ct_phastv6officialfilt2_chrII.12272 1.01e-07

-17
ce6_ct_phastv6officialfilt2_chrX.10553 1.01e-07

+17
ce6_ct_phastv6officialfilt2_chrI.2447 1.12e-07

+17
ce6_ct_phastv6officialfilt2_chrV.8870 1.84e-07

-17
ce6_ct_phastv6officialfilt2_chrV.2897 1.84e-07

-17
ce6_ct_phastv6officialfilt2_chrI.7799 2.46e-07

+17
ce6_ct_phastv6officialfilt2_chrX.7642 2.71e-07

+17
ce6_ct_phastv6officialfilt2_chrI.5617 2.97e-07

+17
ce6_ct_phastv6officialfilt2_chrV.8467 3.26e-07

-17
ce6_ct_phastv6officialfilt2_chrIII.7339 5.10e-07

+17
ce6_ct_phastv6officialfilt2_chrI.14046 6.06e-07

+17
ce6_ct_phastv6officialfilt2_chrII.5125 6.60e-07

+17
ce6_ct_phastv6officialfilt2_chrIII.5755 1.08e-06

+17
ce6_ct_phastv6officialfilt2_chrI.15002 1.17e-06

-17
ce6_ct_phastv6officialfilt2_chrIII.7995 1.37e-06

+17
ce6_ct_phastv6officialfilt2_chrIV.11430 1.37e-06

-17
ce6_ct_phastv6officialfilt2_chrX.15578 1.72e-06

-17
ce6_ct_phastv6officialfilt2_chrIII.12653 1.99e-06

-17
ce6_ct_phastv6officialfilt2_chrII.14507 3.27e-06

-17
ce6_ct_phastv6officialfilt2_chrX.2620 4.85e-06

-17
SCALE
| | | | |
1 25 50 75 100

Motif 17 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 17 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 17 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 17 regular-expression

[CG][CG]G[AC]G[AT][GAC]G[AC][GA][TA]AC[AG]C[ATG][GCA]C

Time 47296.01 secs.

P N
MOTIF 18 width = 15 sites = 15 llr = 251 E-value = 3.5e-016

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
23.2 (bits)
Relative Entropy
24.1 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrV.9601 - 29 2.39e-10 TACCGTATCT CCCCGTAAATCGACA CAAATAAAAT
ce6_ct_phastv6officialfilt2_chrI.4184 - 3 2.39e-10 CATGCAATTT CCCCGTAAATCGACA CTG
ce6_ct_phastv6officialfilt2_chrIII.1920 + 2 4.78e-10 TA GCCCGTAAATCGACA TGAGA
ce6_ct_phastv6officialfilt2_chrIII.1921 - 8 1.46e-09 TTT GCCCGTAAATCCACA CAAGTTTA
ce6_ct_phastv6officialfilt2_chrIV.172 - 25 1.46e-09 CGCGTTGGCT GCCCGTAAATCCACA TGAGAGCCGG
ce6_ct_phastv6officialfilt2_chrIV.639 + 3 1.69e-09 GTC CGCCGTAAATCGACA CGAATTGTTT
ce6_ct_phastv6officialfilt2_chrIV.3895 - 28 2.79e-09 CTCCACCGCT CCCCGTAAATCGACG GCGAGTGTAT
ce6_ct_phastv6officialfilt2_chrIII.6923 + 2 3.52e-09 GT GCGCGTAAATCGACA TGAGAGACGA
ce6_ct_phastv6officialfilt2_chrV.15410 - 6 1.20e-08 CTTTAACATT TCTCGTAAATCGACA CAAGGA
ce6_ct_phastv6officialfilt2_chrIV.3582 + 3 2.17e-08 CTC CGCCGTAAATCTACA CACCCGA
ce6_ct_phastv6officialfilt2_chrV.14747 + 8 2.71e-08 GTGTTGTT TACCGTAAATCCACA CACAAGAGCA
ce6_ct_phastv6officialfilt2_chrIII.8284 + 15 3.57e-08 GATACGCAGT CTTCGTAAATCGACA AT
ce6_ct_phastv6officialfilt2_chrIII.2773 + 2 5.52e-08 CG TTGCGTAAATCGACA CGCGCGCCTT
ce6_ct_phastv6officialfilt2_chrI.7867 + 10 2.39e-07 GCGCCTTGTT TATCGTAAATCTACA
ce6_ct_phastv6officialfilt2_chrIV.11387 + 2 3.84e-07 TC TCCCATAAATACACA CGTCTCATGA

Motif 18 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrV.9601 2.39e-10

-18
ce6_ct_phastv6officialfilt2_chrI.4184 2.39e-10

-18
ce6_ct_phastv6officialfilt2_chrIII.1920 4.78e-10

+18
ce6_ct_phastv6officialfilt2_chrIII.1921 1.46e-09

-18
ce6_ct_phastv6officialfilt2_chrIV.172 1.46e-09

-18
ce6_ct_phastv6officialfilt2_chrIV.639 1.69e-09

+18
ce6_ct_phastv6officialfilt2_chrIV.3895 2.79e-09

-18
ce6_ct_phastv6officialfilt2_chrIII.6923 3.52e-09

+18
ce6_ct_phastv6officialfilt2_chrV.15410 1.20e-08

-18
ce6_ct_phastv6officialfilt2_chrIV.3582 2.17e-08

+18
ce6_ct_phastv6officialfilt2_chrV.14747 2.71e-08

+18
ce6_ct_phastv6officialfilt2_chrIII.8284 3.57e-08

+18
ce6_ct_phastv6officialfilt2_chrIII.2773 5.52e-08

+18
ce6_ct_phastv6officialfilt2_chrI.7867 2.39e-07

+18
ce6_ct_phastv6officialfilt2_chrIV.11387 3.84e-07

+18
SCALE
| | |
1 25 50

Motif 18 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 18 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 18 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 18 regular-expression

[CTG]C[CT]CGTAAATC[GC]ACA

Time 49739.61 secs.

P N
MOTIF 19 width = 15 sites = 23 llr = 320 E-value = 8.2e-013

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
18.7 (bits)
Relative Entropy
20.1 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrI.7866 + 19 4.78e-09 ACTGGTTCAA ACGACACTCCGATAT T
ce6_ct_phastv6officialfilt2_chrIII.7582 + 5 8.29e-09 GCAGT ACGACGCTCCGAGAT GACGCAGCGC
ce6_ct_phastv6officialfilt2_chrII.11498 - 2 8.29e-09 TTG GCGAGACGCAGAGAT TC
ce6_ct_phastv6officialfilt2_chrII.11217 + 6 8.29e-09 TAGTAA ACGACACTCCGAAAT T
ce6_ct_phastv6officialfilt2_chrI.10234 + 5 8.29e-09 CTGAA ACGACACTCCGAAAT AA
ce6_ct_phastv6officialfilt2_chrI.1188 - 4 5.60e-08 ACTT AAGAGACGCAGAGAT TCCG
ce6_ct_phastv6officialfilt2_chrII.1046 - 5 7.18e-08 GTAG AAGAGACGCAGACAT TGCAA
ce6_ct_phastv6officialfilt2_chrIII.12967 - 0 7.87e-08 ATGAATATAA ACGATGCTCCGATAT
ce6_ct_phastv6officialfilt2_chrIV.15505 + 4 8.78e-08 GTTA GAGAGACGCAGACAT CTAGAGATTA
ce6_ct_phastv6officialfilt2_chrI.13846 + 18 8.78e-08 ACGGCATTTC GAGAGACGCAGACAT TCAA
ce6_ct_phastv6officialfilt2_chrIV.1010 - 3 9.65e-08 AAACTTTCAA ACGACGCTCCGCTAT CCC
ce6_ct_phastv6officialfilt2_chrIII.5440 - 26 1.11e-07 CTCAA ACGATGCTCCGAAAT AACGTTTTCG
ce6_ct_phastv6officialfilt2_chrIII.856 - 1 1.11e-07 TTTGTCA ACGACACTCCGTTAT A
ce6_ct_phastv6officialfilt2_chrI.1100 - 1 1.11e-07 AAGAAA ACGATGCTCCGAAAT T
ce6_ct_phastv6officialfilt2_chrIII.12962 - 12 2.92e-07 GTG GCGAGACCCAGAAAT CTATAGACCT
ce6_ct_phastv6officialfilt2_chrIV.5278 + 21 5.58e-07 TAGAGATTTG CAGAGACGCAGATAT AT
ce6_ct_phastv6officialfilt2_chrX.3874 + 25 6.49e-07 TTTAAAAGTT GCGGGACGCCGAAAA TTGGC
ce6_ct_phastv6officialfilt2_chrII.69 - 10 7.06e-07 CCCCCA ACGACACTCCACTAT CCCGCAACGA
ce6_ct_phastv6officialfilt2_chrIV.1418 + 7 1.08e-06 AAGACGA AAGATACGCAGAGAA AACGAGAAAT
ce6_ct_phastv6officialfilt2_chrIII.14959 - 10 1.15e-06 GTGCAA ACGACACTCCAGTAT CCCGCATGCG
ce6_ct_phastv6officialfilt2_chrI.3583 - 0 1.15e-06 AAATTCGGCG ACGACACTCCATTAT
ce6_ct_phastv6officialfilt2_chrIV.4497 + 4 1.56e-06 GAAT AAGATACGCAGACAC ATCC
ce6_ct_phastv6officialfilt2_chrIII.14661 + 3 1.85e-06 GGT GTGAGACGCAGAGAA AAACACTGGT

Motif 19 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrI.7866 4.78e-09

+19
ce6_ct_phastv6officialfilt2_chrIII.7582 8.29e-09

+19
ce6_ct_phastv6officialfilt2_chrII.11498 8.29e-09

-19
ce6_ct_phastv6officialfilt2_chrII.11217 8.29e-09

+19
ce6_ct_phastv6officialfilt2_chrI.10234 8.29e-09

+19
ce6_ct_phastv6officialfilt2_chrI.1188 5.60e-08

-19
ce6_ct_phastv6officialfilt2_chrII.1046 7.18e-08

-19
ce6_ct_phastv6officialfilt2_chrIII.12967 7.87e-08

-19
ce6_ct_phastv6officialfilt2_chrIV.15505 8.78e-08

+19
ce6_ct_phastv6officialfilt2_chrI.13846 8.78e-08

+19
ce6_ct_phastv6officialfilt2_chrIV.1010 9.65e-08

-19
ce6_ct_phastv6officialfilt2_chrIII.5440 1.11e-07

-19
ce6_ct_phastv6officialfilt2_chrIII.856 1.11e-07

-19
ce6_ct_phastv6officialfilt2_chrI.1100 1.11e-07

-19
ce6_ct_phastv6officialfilt2_chrIII.12962 2.92e-07

-19
ce6_ct_phastv6officialfilt2_chrIV.5278 5.58e-07

+19
ce6_ct_phastv6officialfilt2_chrX.3874 6.49e-07

+19
ce6_ct_phastv6officialfilt2_chrII.69 7.06e-07

-19
ce6_ct_phastv6officialfilt2_chrIV.1418 1.08e-06

+19
ce6_ct_phastv6officialfilt2_chrIII.14959 1.15e-06

-19
ce6_ct_phastv6officialfilt2_chrI.3583 1.15e-06

-19
ce6_ct_phastv6officialfilt2_chrIV.4497 1.56e-06

+19
ce6_ct_phastv6officialfilt2_chrIII.14661 1.85e-06

+19
SCALE
| |
1 25

Motif 19 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 19 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 19 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 19 regular-expression

[AG][CA]GA[CGT][AG]C[TG]C[CA]GA[TAG]AT

Time 52177.44 secs.

P N
MOTIF 20 width = 15 sites = 21 llr = 316 E-value = 9.7e-019

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
19.9 (bits)
Relative Entropy
21.7 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIII.951 + 18 1.55e-09 CCTAGAAAAC CAAAAGTTCGGCCAC CAGTTTT
ce6_ct_phastv6officialfilt2_chrI.1826 + 19 1.55e-09 GCCTAGAAAT CCAAAGTTCGGCCAC ATA
ce6_ct_phastv6officialfilt2_chrIII.13188 - 5 5.53e-09 CTAGAAAACG CAAAAACTCGGCCAG CAATT
ce6_ct_phastv6officialfilt2_chrI.1825 + 13 6.59e-09 GCCTAGAAAT CCAAAATTCGGCCCC TATGTGTCGA
ce6_ct_phastv6officialfilt2_chrIV.1686 - 4 1.16e-08 CTAGGAAAAG CGAAAACTCGGCCAG CGTA
ce6_ct_phastv6officialfilt2_chrIII.1382 + 24 1.32e-08 CCACCAGGTG CAAAAGTTAGGCCAC CACT
ce6_ct_phastv6officialfilt2_chrIII.1208 + 4 1.32e-08 ATCT CAAAAGTTAGGCCAC CAATC
ce6_ct_phastv6officialfilt2_chrI.14074 + 21 1.32e-08 TAGTTTCTCG CAAAAGTTAGGCCAC CACTG
ce6_ct_phastv6officialfilt2_chrI.14543 + 20 2.07e-08 GAAGTTTTTG AAAAAGTTCGGCCAC TCACT
ce6_ct_phastv6officialfilt2_chrV.14462 - 3 2.58e-08 GCCTAGAAGC CCAAAACTCGTCCCC CAT
ce6_ct_phastv6officialfilt2_chrV.2805 + 5 3.19e-08 GGCAG CCGAAACTCGGCCAG AAGATGATTT
ce6_ct_phastv6officialfilt2_chrV.14300 - 4 1.08e-07 GCCTAGAAAC CCGAAACTCGTCCCC CATC
ce6_ct_phastv6officialfilt2_chrI.2018 - 2 1.08e-07 CTAGAAATTT GAAAAACTCGGCGGC AT
ce6_ct_phastv6officialfilt2_chrIV.778 + 20 1.22e-07 CTAGAAATCA CAAAAACTAGTCCGC GTT
ce6_ct_phastv6officialfilt2_chrIV.776 - 0 1.22e-07 GTCTAGAAAC CCAAAACTAGTCCGC
ce6_ct_phastv6officialfilt2_chrIV.3213 - 2 1.46e-07 AATA AGAAAACTCGGCGAC CT
ce6_ct_phastv6officialfilt2_chrIV.2873 + 20 1.52e-07 CTAGTACATG GAAAAACTTGGCCAC CGAGT
ce6_ct_phastv6officialfilt2_chrI.13256 + 23 3.04e-07 AGAAAATTCG GGAAAACTCGGCCAT TGAT
ce6_ct_phastv6officialfilt2_chrI.713 + 24 3.04e-07 GAAAGCACAA AAAAAACTCGGACAC A
ce6_ct_phastv6officialfilt2_chrX.8551 + 28 3.92e-07 CGAATTTTAG CAAAAGTTAGGCAAC
ce6_ct_phastv6officialfilt2_chrIII.1765 - 4 5.53e-07 CTAGAAATCC AAAAAGTTCAGCCAC CAAT

Motif 20 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIII.951 1.55e-09

+20
ce6_ct_phastv6officialfilt2_chrI.1826 1.55e-09

+20
ce6_ct_phastv6officialfilt2_chrIII.13188 5.53e-09

-20
ce6_ct_phastv6officialfilt2_chrI.1825 6.59e-09

+20
ce6_ct_phastv6officialfilt2_chrIV.1686 1.16e-08

-20
ce6_ct_phastv6officialfilt2_chrIII.1382 1.32e-08

+20
ce6_ct_phastv6officialfilt2_chrIII.1208 1.32e-08

+20
ce6_ct_phastv6officialfilt2_chrI.14074 1.32e-08

+20
ce6_ct_phastv6officialfilt2_chrI.14543 2.07e-08

+20
ce6_ct_phastv6officialfilt2_chrV.14462 2.58e-08

-20
ce6_ct_phastv6officialfilt2_chrV.2805 3.19e-08

+20
ce6_ct_phastv6officialfilt2_chrV.14300 1.08e-07

-20
ce6_ct_phastv6officialfilt2_chrI.2018 1.08e-07

-20
ce6_ct_phastv6officialfilt2_chrIV.778 1.22e-07

+20
ce6_ct_phastv6officialfilt2_chrIV.776 1.22e-07

-20
ce6_ct_phastv6officialfilt2_chrIV.3213 1.46e-07

-20
ce6_ct_phastv6officialfilt2_chrIV.2873 1.52e-07

+20
ce6_ct_phastv6officialfilt2_chrI.13256 3.04e-07

+20
ce6_ct_phastv6officialfilt2_chrI.713 3.04e-07

+20
ce6_ct_phastv6officialfilt2_chrX.8551 3.92e-07

+20
ce6_ct_phastv6officialfilt2_chrIII.1765 5.53e-07

-20
SCALE
| | | |
1 25 50 75

Motif 20 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 20 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 20 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 20 regular-expression

C[AC]AAA[AG][CT]T[CA]GGCCAC

Time 54610.49 secs.

P N
MOTIF 21 width = 11 sites = 46 llr = 499 E-value = 2.4e-010

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
10.8 (bits)
Relative Entropy
15.7 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIII.14225 + 27 8.24e-09 GCCCCTTTTT CCGTGCGGCGC C
ce6_ct_phastv6officialfilt2_chrII.3792 - 15 1.15e-07 AA CCGTGCGGCAC TCTTGCGAAA
ce6_ct_phastv6officialfilt2_chrV.10271 + 23 3.08e-07 TATTGCTTAC CGACGCGGCGC TCAATCGCAA
ce6_ct_phastv6officialfilt2_chrIV.14147 + 10 3.82e-07 AGTTTTGCAA CCCTGCGGCAC GGTTTTT
ce6_ct_phastv6officialfilt2_chrIV.7621 + 3 3.82e-07 GCG CCCCGCGGCCG AAAACCAGTG
ce6_ct_phastv6officialfilt2_chrII.13907 + 4 3.82e-07 AAAC CGACGCGGCGG ACAACTTGCG
ce6_ct_phastv6officialfilt2_chrIV.1693 - 21 7.31e-07 TG CGATGCGGCAC GGAAAAGTGG
ce6_ct_phastv6officialfilt2_chrII.3039 - 4 7.31e-07 GCCTACGAAT CCGTGCCGCAG TAGT
ce6_ct_phastv6officialfilt2_chrV.1854 - 9 7.31e-07 TTATGAAAAA CCGTGCCGCAG AATTACGAA
ce6_ct_phastv6officialfilt2_chrI.11403 - 97 8.52e-07 TTGTCAA CCGGGCGGCTC AACTCAAACA
ce6_ct_phastv6officialfilt2_chrV.4090 + 14 9.97e-07 GCCACCTGCT CCGGCCGGCCG AACAGTGCGC
ce6_ct_phastv6officialfilt2_chrX.5520 + 4 1.17e-06 TCCG CCAGCCGGCGG TCACTAAC
ce6_ct_phastv6officialfilt2_chrIV.2234 - 10 1.56e-06 CA CGCGTCGGCGG AATTTCGGAG
ce6_ct_phastv6officialfilt2_chrX.6183 + 7 1.56e-06 GCGTCTT CCGTTCCGCGC AGACAGCTGT
ce6_ct_phastv6officialfilt2_chrIII.8604 - 12 1.81e-06 CGCTTCGGCGC GCCAAAAATA
ce6_ct_phastv6officialfilt2_chrIV.10368 + 28 1.81e-06 GCAGAAGCTG CGGTTCGGCCG TTCAAAGGCG
ce6_ct_phastv6officialfilt2_chrI.1580 - 20 2.08e-06 GC CCCGCCGGCCG TCGATACGTC
ce6_ct_phastv6officialfilt2_chrX.1121 + 6 2.40e-06 CGCTCG CCACTCGGCCG CGCAGGG
ce6_ct_phastv6officialfilt2_chrIII.3114 - 4 2.78e-06 CTCGTCTTCT CCGGGGGGCGC CAAC
ce6_ct_phastv6officialfilt2_chrII.14096 + 10 3.50e-06 TAATCAAAAA GCATGCGGCAC TTCATGCGCC
ce6_ct_phastv6officialfilt2_chrX.5612 - 3 3.92e-06 GTTCAAGAAT TCAGGCGGCGC AGA
ce6_ct_phastv6officialfilt2_chrV.6343 + 0 3.92e-06 CCAGTCCGCCC ATCGGCAG
ce6_ct_phastv6officialfilt2_chrIII.11882 - 32 4.38e-06 CGATGCGGCTG CGTAGCGTGC
ce6_ct_phastv6officialfilt2_chrX.5408 - 3 4.85e-06 CCGTTGTTAC CCATTCCGCCC GTT
ce6_ct_phastv6officialfilt2_chrIV.11982 - 9 5.34e-06 AGAAAGAG AGGGGCGGCAC TTATGAGGA
ce6_ct_phastv6officialfilt2_chrX.5518 - 61 5.34e-06 ACGT CCACTCCGCCC TCCGACTTTT
ce6_ct_phastv6officialfilt2_chrI.13957 - 5 5.34e-06 CGATTTGCAA GGCTGCGGCAC TGTTT
ce6_ct_phastv6officialfilt2_chrX.12083 + 19 5.93e-06 TAACTATGCG TCGTGCGGCAG
ce6_ct_phastv6officialfilt2_chrI.3594 - 1 5.93e-06 CCAACGAATT GGCTGCGGCAG C
ce6_ct_phastv6officialfilt2_chrX.7126 - 26 6.56e-06 AGGAAAAA AGACGCGGCGC AATTTCAAAT
ce6_ct_phastv6officialfilt2_chrX.11132 + 88 7.95e-06 CGCATTTTCG ACATGCGGCAG T
ce6_ct_phastv6officialfilt2_chrV.6614 + 0 7.95e-06 CGCGTCCGCAG AGAGCGCGCA
ce6_ct_phastv6officialfilt2_chrII.7055 - 0 9.62e-06 TGCATCACGT ACACGCCGCGC
ce6_ct_phastv6officialfilt2_chrX.4500 - 15 1.05e-05 CGGAAACAGG CGCTCCCGCAC CTTATTTCCT
ce6_ct_phastv6officialfilt2_chrX.13981 - 34 1.14e-05 TAGTGCAACA ACAGTCGGCGG TGACTAAAAA
ce6_ct_phastv6officialfilt2_chrV.8801 + 32 1.24e-05 TAATTCAAAT GGGTTCCGCGC GGGAAGGCCG
ce6_ct_phastv6officialfilt2_chrX.3412 - 70 1.34e-05 AACACTGACG ACATTCGGCGG CCAATTATTG
ce6_ct_phastv6officialfilt2_chrI.15367 + 7 1.45e-05 CGCAAAA CTGTGCGGCGG TGTTGCAAAA
ce6_ct_phastv6officialfilt2_chrI.7889 - 8 1.45e-05 AATGAACTTT TCGGGCGGCTG AAAGGGTT
ce6_ct_phastv6officialfilt2_chrII.7075 - 32 1.70e-05 GGCCTGGTTT CCATTCCGCTC GACCGAAAAC
ce6_ct_phastv6officialfilt2_chrX.12833 - 2 1.84e-05 TTAATG GGACTCGGCAG AA
ce6_ct_phastv6officialfilt2_chrIII.2377 - 8 1.99e-05 GGT CGGTGGCGCAG TGGCTAAT
ce6_ct_phastv6officialfilt2_chrV.11106 - 17 1.99e-05 ATCAAGTTTA GCCCTCCGCCC TCCGTGCCAT
ce6_ct_phastv6officialfilt2_chrV.8952 + 9 3.03e-05 GGAACCCAA TCGCCCCGCCC ATTTTTATGC
ce6_ct_phastv6officialfilt2_chrX.11826 + 39 3.20e-05 CGGAGTGATT CGAGGGGGCTG
ce6_ct_phastv6officialfilt2_chrIII.7607 + 45 3.37e-05 TGCCCGGATT TGATCCGGCAC GCGCATCGCC

Motif 21 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIII.14225 8.24e-09

+21
ce6_ct_phastv6officialfilt2_chrII.3792 1.15e-07

-21
ce6_ct_phastv6officialfilt2_chrV.10271 3.08e-07

+21
ce6_ct_phastv6officialfilt2_chrIV.14147 3.82e-07

+21
ce6_ct_phastv6officialfilt2_chrIV.7621 3.82e-07

+21
ce6_ct_phastv6officialfilt2_chrII.13907 3.82e-07

+21
ce6_ct_phastv6officialfilt2_chrIV.1693 7.31e-07

-21
ce6_ct_phastv6officialfilt2_chrII.3039 7.31e-07

-21
ce6_ct_phastv6officialfilt2_chrV.1854 7.31e-07

-21
ce6_ct_phastv6officialfilt2_chrI.11403 8.52e-07

-21
ce6_ct_phastv6officialfilt2_chrV.4090 9.97e-07

+21
ce6_ct_phastv6officialfilt2_chrX.5520 1.17e-06

+21
ce6_ct_phastv6officialfilt2_chrIV.2234 1.56e-06

-21
ce6_ct_phastv6officialfilt2_chrX.6183 1.56e-06

+21
ce6_ct_phastv6officialfilt2_chrIII.8604 1.81e-06

-21
ce6_ct_phastv6officialfilt2_chrIV.10368 1.81e-06

+21
ce6_ct_phastv6officialfilt2_chrI.1580 2.08e-06

-21
ce6_ct_phastv6officialfilt2_chrX.1121 2.40e-06

+21
ce6_ct_phastv6officialfilt2_chrIII.3114 2.78e-06

-21
ce6_ct_phastv6officialfilt2_chrII.14096 3.50e-06

+21
ce6_ct_phastv6officialfilt2_chrX.5612 3.92e-06

-21
ce6_ct_phastv6officialfilt2_chrV.6343 3.92e-06

+21
ce6_ct_phastv6officialfilt2_chrIII.11882 4.38e-06

-21
ce6_ct_phastv6officialfilt2_chrX.5408 4.85e-06

-21
ce6_ct_phastv6officialfilt2_chrIV.11982 5.34e-06

-21
ce6_ct_phastv6officialfilt2_chrX.5518 5.34e-06

-21
ce6_ct_phastv6officialfilt2_chrI.13957 5.34e-06

-21
ce6_ct_phastv6officialfilt2_chrX.12083 5.93e-06

+21
ce6_ct_phastv6officialfilt2_chrI.3594 5.93e-06

-21
ce6_ct_phastv6officialfilt2_chrX.7126 6.56e-06

-21
ce6_ct_phastv6officialfilt2_chrX.11132 7.95e-06

+21
ce6_ct_phastv6officialfilt2_chrV.6614 7.95e-06

+21
ce6_ct_phastv6officialfilt2_chrII.7055 9.62e-06

-21
ce6_ct_phastv6officialfilt2_chrX.4500 1.05e-05

-21
ce6_ct_phastv6officialfilt2_chrX.13981 1.14e-05

-21
ce6_ct_phastv6officialfilt2_chrV.8801 1.24e-05

+21
ce6_ct_phastv6officialfilt2_chrX.3412 1.34e-05

-21
ce6_ct_phastv6officialfilt2_chrI.15367 1.45e-05

+21
ce6_ct_phastv6officialfilt2_chrI.7889 1.45e-05

-21
ce6_ct_phastv6officialfilt2_chrII.7075 1.70e-05

-21
ce6_ct_phastv6officialfilt2_chrX.12833 1.84e-05

-21
ce6_ct_phastv6officialfilt2_chrIII.2377 1.99e-05

-21
ce6_ct_phastv6officialfilt2_chrV.11106 1.99e-05

-21
ce6_ct_phastv6officialfilt2_chrV.8952 3.03e-05

+21
ce6_ct_phastv6officialfilt2_chrX.11826 3.20e-05

+21
ce6_ct_phastv6officialfilt2_chrIII.7607 3.37e-05

+21
SCALE
| | | | | | | |
1 25 50 75 100 125 150

Motif 21 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 21 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 21 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 21 regular-expression

C[CG][AGC][TGC][GT]C[GC]GC[AGC][CG]

Time 57036.96 secs.

P N
MOTIF 22 width = 15 sites = 15 llr = 237 E-value = 9.4e-011

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
20.3 (bits)
Relative Entropy
22.8 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrV.14574 + 19 1.70e-10 CCGTTATTTT GACCCCCATATTGCC TATATTC
ce6_ct_phastv6officialfilt2_chrIII.897 + 19 3.65e-10 GCTTCAAAAT GACCCCCATCATGCC TATTTTCCGA
ce6_ct_phastv6officialfilt2_chrIII.1277 - 1 2.02e-09 GCTTCAAAAT GACCCCCAACATGCC C
ce6_ct_phastv6officialfilt2_chrIII.1234 - 1 2.02e-09 GCTTCAAAAT GACCCCCAACATGCC T
ce6_ct_phastv6officialfilt2_chrI.13544 - 4 3.08e-09 GCGTCAATTT GAGCCCCATATTGCC TAGG
ce6_ct_phastv6officialfilt2_chrV.15183 + 5 4.89e-09 GTTTT GACACCCATATTGAC TAG
ce6_ct_phastv6officialfilt2_chrV.14484 - 3 9.32e-09 GTTGATTT GACACCCATATCGAC TAT
ce6_ct_phastv6officialfilt2_chrIII.1447 - 4 1.14e-08 TTTAAAAT GACACCCAACATGCC TTGG
ce6_ct_phastv6officialfilt2_chrIV.1753 - 3 3.32e-08 GCTTTGATTT GACACCCATATTGCT ATA
ce6_ct_phastv6officialfilt2_chrV.14803 + 11 5.28e-08 GGAAAAGTTT GACCCCCATATTGGT ATG
ce6_ct_phastv6officialfilt2_chrX.5518 + 20 1.33e-07 TATATTTGCT GACCCTCATAGTGAC CGTCAGAATA
ce6_ct_phastv6officialfilt2_chrV.14802 - 14 1.43e-07 GCTTTCATTT AAGCCCCATATCGAC CTATTTCTGT
ce6_ct_phastv6officialfilt2_chrIV.8911 + 59 1.99e-07 TGTTTTTTTC TACCCCCTTCTTGAC ACCAATA
ce6_ct_phastv6officialfilt2_chrII.1318 + 10 3.88e-07 GCTAAATTTT AAACCCCATATCGAC CAG
ce6_ct_phastv6officialfilt2_chrV.13827 - 21 4.18e-07 CCAA GACACCGGACTTGAC GACAAAATGT

Motif 22 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrV.14574 1.70e-10

+22
ce6_ct_phastv6officialfilt2_chrIII.897 3.65e-10

+22
ce6_ct_phastv6officialfilt2_chrIII.1277 2.02e-09

-22
ce6_ct_phastv6officialfilt2_chrIII.1234 2.02e-09

-22
ce6_ct_phastv6officialfilt2_chrI.13544 3.08e-09

-22
ce6_ct_phastv6officialfilt2_chrV.15183 4.89e-09

+22
ce6_ct_phastv6officialfilt2_chrV.14484 9.32e-09

-22
ce6_ct_phastv6officialfilt2_chrIII.1447 1.14e-08

-22
ce6_ct_phastv6officialfilt2_chrIV.1753 3.32e-08

-22
ce6_ct_phastv6officialfilt2_chrV.14803 5.28e-08

+22
ce6_ct_phastv6officialfilt2_chrX.5518 1.33e-07

+22
ce6_ct_phastv6officialfilt2_chrV.14802 1.43e-07

-22
ce6_ct_phastv6officialfilt2_chrIV.8911 1.99e-07

+22
ce6_ct_phastv6officialfilt2_chrII.1318 3.88e-07

+22
ce6_ct_phastv6officialfilt2_chrV.13827 4.18e-07

-22
SCALE
| | | |
1 25 50 75

Motif 22 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 22 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 22 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 22 regular-expression

GAC[CA]CCCA[TA][AC][TA][TC]G[AC]C

Time 59444.80 secs.

P N
MOTIF 23 width = 12 sites = 26 llr = 323 E-value = 3.4e-006

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
19.3 (bits)
Relative Entropy
17.9 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIV.15579 - 7 2.45e-07 AGAAAAAAAA TTACTGTTTCAA AATCCTT
ce6_ct_phastv6officialfilt2_chrIV.15572 + 27 2.45e-07 GTAAAAAAAA TTACTGTTTCAA AATGTTT
ce6_ct_phastv6officialfilt2_chrIV.15537 + 13 2.45e-07 ACTCAAAAAA TTACTGTTTCAA AACTTTTTCA
ce6_ct_phastv6officialfilt2_chrIV.15226 - 7 2.45e-07 AGGAAAAAAA TTACTGTTTCAA AAAGTTT
ce6_ct_phastv6officialfilt2_chrIV.14986 - 7 2.45e-07 AATCAAAAAA TTACTGTTTCAA AACTGTG
ce6_ct_phastv6officialfilt2_chrIV.14767 - 5 2.45e-07 AAGAAATT TTACTGTTTCAA GAACA
ce6_ct_phastv6officialfilt2_chrIV.4563 + 7 2.45e-07 AATTATT TTACTGTTTCAA AAATATGT
ce6_ct_phastv6officialfilt2_chrIV.4502 + 13 2.45e-07 TGGAAAAAAT TTACTGTTTCAA AACTTTT
ce6_ct_phastv6officialfilt2_chrIV.4298 + 8 2.45e-07 AAAAAAAA TTACTGTTTCAA AAATCTGAA
ce6_ct_phastv6officialfilt2_chrIV.15325 + 16 3.62e-07 CAAAAATGTT TCACTGTTTCAA GGA
ce6_ct_phastv6officialfilt2_chrIV.10713 + 9 3.62e-07 AACAATTTT TCACTGTTTCAA AATT
ce6_ct_phastv6officialfilt2_chrIV.15668 + 17 4.79e-07 CAAAAAATGT TTGCTGTTTCAA ATTTTC
ce6_ct_phastv6officialfilt2_chrIV.14095 + 12 5.97e-07 CAAAAAAGTT TTACTGTTTCAG AATTATGTG
ce6_ct_phastv6officialfilt2_chrIV.15021 + 14 7.14e-07 TGAAAAAAAC TTACTGTTTCGA AAA
ce6_ct_phastv6officialfilt2_chrIV.14988 + 22 1.42e-06 GAAAAAAAAA TTCCTGTTTCAA AAATTTCAGA
ce6_ct_phastv6officialfilt2_chrIV.5007 - 13 1.42e-06 AGAAAAAAAA TTACGGTTTCAA AGTTTCTACA
ce6_ct_phastv6officialfilt2_chrIV.5359 + 15 1.72e-06 TAGAAAAAGT TTACTGTTTCAT GTTT
ce6_ct_phastv6officialfilt2_chrIV.15285 - 1 3.08e-06 TCAAAATTTT TCACTGTTTCAT A
ce6_ct_phastv6officialfilt2_chrV.8468 + 17 3.08e-06 CCGATAAAGT TTGCAGTTTCAA CCTTTACCTA
ce6_ct_phastv6officialfilt2_chrIV.15612 - 7 3.44e-06 CACGAAAAAT ATACTGTTTCAA TAGGAAC
ce6_ct_phastv6officialfilt2_chrIV.14546 - 21 3.44e-06 TGAAAAAAAA TCACTGTTCCAA GAAGTTGTCA
ce6_ct_phastv6officialfilt2_chrIV.4307 - 5 3.44e-06 CAAAAAAAAT TCACTGCTTCAA GATTT
ce6_ct_phastv6officialfilt2_chrIV.14881 - 11 3.63e-06 TGAAAAAAAA TTGCCGTTTCAA AAGTTTCATA
ce6_ct_phastv6officialfilt2_chrIV.14536 - 11 3.90e-06 TAAAAAAAAT TTACAGTTTCAG AACTTTCTGA
ce6_ct_phastv6officialfilt2_chrIV.15965 - 3 7.41e-06 AGAAAAAAAT TTTCTGTTTCGA GGA
ce6_ct_phastv6officialfilt2_chrIII.7338 + 13 8.98e-06 AGCCAAAAGA TAACAGTTTCAA AGAGTGGAGG

Motif 23 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIV.15579 2.45e-07

-23
ce6_ct_phastv6officialfilt2_chrIV.15572 2.45e-07

+23
ce6_ct_phastv6officialfilt2_chrIV.15537 2.45e-07

+23
ce6_ct_phastv6officialfilt2_chrIV.15226 2.45e-07

-23
ce6_ct_phastv6officialfilt2_chrIV.14986 2.45e-07

-23
ce6_ct_phastv6officialfilt2_chrIV.14767 2.45e-07

-23
ce6_ct_phastv6officialfilt2_chrIV.4563 2.45e-07

+23
ce6_ct_phastv6officialfilt2_chrIV.4502 2.45e-07

+23
ce6_ct_phastv6officialfilt2_chrIV.4298 2.45e-07

+23
ce6_ct_phastv6officialfilt2_chrIV.15325 3.62e-07

+23
ce6_ct_phastv6officialfilt2_chrIV.10713 3.62e-07

+23
ce6_ct_phastv6officialfilt2_chrIV.15668 4.79e-07

+23
ce6_ct_phastv6officialfilt2_chrIV.14095 5.97e-07

+23
ce6_ct_phastv6officialfilt2_chrIV.15021 7.14e-07

+23
ce6_ct_phastv6officialfilt2_chrIV.14988 1.42e-06

+23
ce6_ct_phastv6officialfilt2_chrIV.5007 1.42e-06

-23
ce6_ct_phastv6officialfilt2_chrIV.5359 1.72e-06

+23
ce6_ct_phastv6officialfilt2_chrIV.15285 3.08e-06

-23
ce6_ct_phastv6officialfilt2_chrV.8468 3.08e-06

+23
ce6_ct_phastv6officialfilt2_chrIV.15612 3.44e-06

-23
ce6_ct_phastv6officialfilt2_chrIV.14546 3.44e-06

-23
ce6_ct_phastv6officialfilt2_chrIV.4307 3.44e-06

-23
ce6_ct_phastv6officialfilt2_chrIV.14881 3.63e-06

-23
ce6_ct_phastv6officialfilt2_chrIV.14536 3.90e-06

-23
ce6_ct_phastv6officialfilt2_chrIV.15965 7.41e-06

-23
ce6_ct_phastv6officialfilt2_chrIII.7338 8.98e-06

+23
SCALE
| | |
1 25 50

Motif 23 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 23 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 23 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 23 regular-expression

TTACTGTTTCAA

Time 61843.53 secs.

P N
MOTIF 24 width = 18 sites = 18 llr = 279 E-value = 3.8e-011

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
20.1 (bits)
Relative Entropy
22.4 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIII.6083 + 5 4.57e-10 ATTAA CGTTTGATACTCAGCCAA CTATTC
ce6_ct_phastv6officialfilt2_chrII.9001 - 5 4.57e-10 CCACACAAAA CGTTGAATACTCAGCCAA CGACC
ce6_ct_phastv6officialfilt2_chrV.4956 - 36 4.57e-10 TTAA CGTTGAATACTCAGGCAA GTACGCAGCG
ce6_ct_phastv6officialfilt2_chrI.3594 - 18 4.57e-10 AGTGTTACAA CGTTGAATACTCAGCCAA CGAATTGGCT
ce6_ct_phastv6officialfilt2_chrIII.8324 + 65 2.70e-09 CGCGACGAGG CATTGAATACTCAGGCAA C
ce6_ct_phastv6officialfilt2_chrIV.11714 + 15 7.19e-09 CTGCGTACCA CGTTTGATACTCAGTCAC TTACCACAGC
ce6_ct_phastv6officialfilt2_chrIII.6869 - 6 1.02e-08 AAG CGTTGAATACTCAGTCAA CGGCCA
ce6_ct_phastv6officialfilt2_chrIV.14758 + 22 1.42e-08 AGCATTAAAT CAGTGGAGACGCAGGGAA ATCGAA
ce6_ct_phastv6officialfilt2_chrIII.8814 + 3 2.62e-08 ATA GCGTCGATACTCAGCGAA ATA
ce6_ct_phastv6officialfilt2_chrX.6772 + 8 5.56e-08 TTTTTTGT CCTTGGATGGTCACCGAC GCGAATAGAA
ce6_ct_phastv6officialfilt2_chrV.11032 + 30 9.94e-08 TTCTTCTATT CATTTGCTCCTCAGCGGC TTGCCTTTGC
ce6_ct_phastv6officialfilt2_chrIV.6964 + 16 1.26e-07 AAGAAAGGAT GCTTGACTGCTCACCGAC AATTACGAC
ce6_ct_phastv6officialfilt2_chrII.8190 - 17 1.47e-07 GCACACATAA AGTTTGATGCGCAGGCGC GGGAATTCAA
ce6_ct_phastv6officialfilt2_chrX.6774 + 26 1.70e-07 TATCAAAAAG CGTTGGAGACTTGCGGAC AAATTGCTGT
ce6_ct_phastv6officialfilt2_chrX.9913 - 32 2.42e-07 TATTATCATG CATTCGAGACTTACGCAA GACAAAAAAG
ce6_ct_phastv6officialfilt2_chrI.7499 - 23 2.77e-07 CGAAAGAA CGGCGGACACTCACGGTC GTAACGCGAC
ce6_ct_phastv6officialfilt2_chrI.10383 + 2 2.95e-07 TT GAGTCGCTACTCAGCGCA GG
ce6_ct_phastv6officialfilt2_chrX.5233 - 29 4.07e-07 AGCACAATTG AATCTGATGCTCAGGGGA ACAATTAGCG

Motif 24 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIII.6083 4.57e-10

+24
ce6_ct_phastv6officialfilt2_chrII.9001 4.57e-10

-24
ce6_ct_phastv6officialfilt2_chrV.4956 4.57e-10

-24
ce6_ct_phastv6officialfilt2_chrI.3594 4.57e-10

-24
ce6_ct_phastv6officialfilt2_chrIII.8324 2.70e-09

+24
ce6_ct_phastv6officialfilt2_chrIV.11714 7.19e-09

+24
ce6_ct_phastv6officialfilt2_chrIII.6869 1.02e-08

-24
ce6_ct_phastv6officialfilt2_chrIV.14758 1.42e-08

+24
ce6_ct_phastv6officialfilt2_chrIII.8814 2.62e-08

+24
ce6_ct_phastv6officialfilt2_chrX.6772 5.56e-08

+24
ce6_ct_phastv6officialfilt2_chrV.11032 9.94e-08

+24
ce6_ct_phastv6officialfilt2_chrIV.6964 1.26e-07

+24
ce6_ct_phastv6officialfilt2_chrII.8190 1.47e-07

-24
ce6_ct_phastv6officialfilt2_chrX.6774 1.70e-07

+24
ce6_ct_phastv6officialfilt2_chrX.9913 2.42e-07

-24
ce6_ct_phastv6officialfilt2_chrI.7499 2.77e-07

-24
ce6_ct_phastv6officialfilt2_chrI.10383 2.95e-07

+24
ce6_ct_phastv6officialfilt2_chrX.5233 4.07e-07

-24
SCALE
| | | | |
1 25 50 75 100

Motif 24 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 24 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 24 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 24 regular-expression

C[GA][TG]T[GT][GA]AT[AG]CTCA[GC][CG][CG]A[AC]

Time 64223.28 secs.

P N
MOTIF 25 width = 15 sites = 22 llr = 295 E-value = 4.7e-006

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
17.4 (bits)
Relative Entropy
19.4 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrII.13692 - 3 1.03e-09 TGT CGGTGTTTGCGGACT TCG
ce6_ct_phastv6officialfilt2_chrII.6036 + 6 1.03e-09 TGTGTG CGGTGTTTGCGGACT
ce6_ct_phastv6officialfilt2_chrIV.3307 + 5 4.84e-08 GTGAT CGGTGTTTGCACAGA ATTCGAGCTA
ce6_ct_phastv6officialfilt2_chrV.4066 - 13 4.84e-08 TTTTAT CGGTGTTTGCACAGA TTTCGCAACA
ce6_ct_phastv6officialfilt2_chrIV.172 - 1 7.31e-08 ATGAGAGCCG GAGTGTTTGCGGAGA G
ce6_ct_phastv6officialfilt2_chrX.5568 - 39 8.25e-08 CGTTGATTGG GGGTGTCACCGCTGT CACTTTTCAC
ce6_ct_phastv6officialfilt2_chrII.6292 + 12 9.46e-08 TCTCGTCAGT CGGTGTTTGCACAGC TTACATTTT
ce6_ct_phastv6officialfilt2_chrIV.638 - 34 1.36e-07 CGCCGGACTA CGGTGTTTGCATTGT GGAGCGTGTT
ce6_ct_phastv6officialfilt2_chrI.13873 - 26 1.36e-07 CACTTG CGGTGTTTGCACTGA GTGCATTTTA
ce6_ct_phastv6officialfilt2_chrI.10233 + 17 1.52e-07 CAGTTGAAAT GAGTGTTACCGTACT TCGC
ce6_ct_phastv6officialfilt2_chrI.4686 + 2 1.52e-07 AC GAGTGTTACCGTACT CTTGCTGCGT
ce6_ct_phastv6officialfilt2_chrX.2439 - 27 2.84e-07 A GGGTGTTTCCAGTGA TGTTTAAAAA
ce6_ct_phastv6officialfilt2_chrX.487 - 17 3.42e-07 AAC GAGTGTCACCGTACT CGGACTGCAA
ce6_ct_phastv6officialfilt2_chrIII.8324 + 24 3.73e-07 CACGTAAAAC GAGTGTCACCGTAGT CAGACGCGGG
ce6_ct_phastv6officialfilt2_chrV.7435 - 20 6.77e-07 GCG AAGTGTTTGCAGACT CAGTGTGTTG
ce6_ct_phastv6officialfilt2_chrIV.6942 - 10 7.32e-07 CAGCTGAAAC AAGTGTTACCGTACT ACACGCATCG
ce6_ct_phastv6officialfilt2_chrX.5366 + 19 7.32e-07 TTGTGAAACG GGGTGGTTGCGCAAT AGAAAAAGTT
ce6_ct_phastv6officialfilt2_chrIV.16093 + 15 1.06e-06 ACTTTGAGGT TGGTGGTTGCGTACT AGGCATTTTA
ce6_ct_phastv6officialfilt2_chrX.7586 - 24 1.14e-06 TTGCATTTTT GCGTGTTACCGGTCA AAGAATGAAA
ce6_ct_phastv6officialfilt2_chrI.14667 - 6 2.08e-06 AGCTGTCTGCGCTCT CCCCTC
ce6_ct_phastv6officialfilt2_chrV.1101 + 5 2.65e-06 GAGAG AGGTGATAGCGCTGA ACGCGGCATT
ce6_ct_phastv6officialfilt2_chrX.14811 - 54 4.36e-06 TTC CGGTGTTAGTATACC TTAACACGAC

Motif 25 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrII.13692 1.03e-09

-25
ce6_ct_phastv6officialfilt2_chrII.6036 1.03e-09

+25
ce6_ct_phastv6officialfilt2_chrIV.3307 4.84e-08

+25
ce6_ct_phastv6officialfilt2_chrV.4066 4.84e-08

-25
ce6_ct_phastv6officialfilt2_chrIV.172 7.31e-08

-25
ce6_ct_phastv6officialfilt2_chrX.5568 8.25e-08

-25
ce6_ct_phastv6officialfilt2_chrII.6292 9.46e-08

+25
ce6_ct_phastv6officialfilt2_chrIV.638 1.36e-07

-25
ce6_ct_phastv6officialfilt2_chrI.13873 1.36e-07

-25
ce6_ct_phastv6officialfilt2_chrI.10233 1.52e-07

+25
ce6_ct_phastv6officialfilt2_chrI.4686 1.52e-07

+25
ce6_ct_phastv6officialfilt2_chrX.2439 2.84e-07

-25
ce6_ct_phastv6officialfilt2_chrX.487 3.42e-07

-25
ce6_ct_phastv6officialfilt2_chrIII.8324 3.73e-07

+25
ce6_ct_phastv6officialfilt2_chrV.7435 6.77e-07

-25
ce6_ct_phastv6officialfilt2_chrIV.6942 7.32e-07

-25
ce6_ct_phastv6officialfilt2_chrX.5366 7.32e-07

+25
ce6_ct_phastv6officialfilt2_chrIV.16093 1.06e-06

+25
ce6_ct_phastv6officialfilt2_chrX.7586 1.14e-06

-25
ce6_ct_phastv6officialfilt2_chrI.14667 2.08e-06

-25
ce6_ct_phastv6officialfilt2_chrV.1101 2.65e-06

+25
ce6_ct_phastv6officialfilt2_chrX.14811 4.36e-06

-25
SCALE
| | | |
1 25 50 75

Motif 25 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 25 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 25 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 25 regular-expression

[GC][GA]GTGTT[TA][GC]C[GA][CTG][AT][CG][TA]

Time 66711.25 secs.

P N
MOTIF 26 width = 18 sites = 9 llr = 175 E-value = 8.2e-006

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
28.5 (bits)
Relative Entropy
28.1 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIV.16093 + 34 5.94e-11 CGTACTAGGC ATTTTATTTGACGCGCAA AGTTTTGGAA
ce6_ct_phastv6officialfilt2_chrIV.3318 + 24 5.94e-11 CGTACCAGGC ATTTTATTTGACGCGCAA CACT
ce6_ct_phastv6officialfilt2_chrIII.2157 + 1 2.04e-10 C ATCAGATTTGACGCGCAA AATTGTGTT
ce6_ct_phastv6officialfilt2_chrV.244 + 7 2.92e-10 ACAAGGC ATTTTAATTGACGCGCAA
ce6_ct_phastv6officialfilt2_chrI.13873 - 4 2.92e-10 CACTGAGTGC ATTTTAATTGACGCGCAA ATCT
ce6_ct_phastv6officialfilt2_chrII.13420 + 8 1.04e-09 TTGAAAAC ACCAGATTTGACGCGCAA TTTTT
ce6_ct_phastv6officialfilt2_chrII.8265 - 5 1.35e-09 ATCAAATTTGACGCGCAA TGCAG
ce6_ct_phastv6officialfilt2_chrV.15402 - 4 2.93e-09 CGTACCCGGC ATTTTATTCGACGAGCAA ACAG
ce6_ct_phastv6officialfilt2_chrX.3765 + 46 1.01e-08 TAGCTTGATT AGTGTAGCTGACGAGCAA TATCAAATTT

Motif 26 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIV.16093 5.94e-11

+26
ce6_ct_phastv6officialfilt2_chrIV.3318 5.94e-11

+26
ce6_ct_phastv6officialfilt2_chrIII.2157 2.04e-10

+26
ce6_ct_phastv6officialfilt2_chrV.244 2.92e-10

+26
ce6_ct_phastv6officialfilt2_chrI.13873 2.92e-10

-26
ce6_ct_phastv6officialfilt2_chrII.13420 1.04e-09

+26
ce6_ct_phastv6officialfilt2_chrII.8265 1.35e-09

-26
ce6_ct_phastv6officialfilt2_chrV.15402 2.93e-09

-26
ce6_ct_phastv6officialfilt2_chrX.3765 1.01e-08

+26
SCALE
| | | |
1 25 50 75

Motif 26 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 26 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 26 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 26 regular-expression

AT[TC][TA][TG]A[TA]TTGACG[CA]GCAA

Time 69086.78 secs.

P N
MOTIF 27 width = 11 sites = 50 llr = 569 E-value = 3.5e-025

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
16.7 (bits)
Relative Entropy
16.4 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrII.7181 - 10 1.66e-07 GAAATTTTGT GGCTGAAAATC TGAAAATTTA
ce6_ct_phastv6officialfilt2_chrV.15315 - 7 1.66e-07 TCGATTTTTG GGCTGAAAATC GACCTTT
ce6_ct_phastv6officialfilt2_chrIII.1659 + 6 3.33e-07 TAAATT GGCTGAAAATG TGAATA
ce6_ct_phastv6officialfilt2_chrI.15668 - 12 3.33e-07 TTC GGCTGAAAATG TGGTAAAATA
ce6_ct_phastv6officialfilt2_chrIII.1799 - 5 6.80e-07 GCGGAAATCC GGCTGAAAATT GGAAA
ce6_ct_phastv6officialfilt2_chrIV.2531 - 4 6.80e-07 GAGAATT GGCTGAAAATT TCGA
ce6_ct_phastv6officialfilt2_chrV.14356 + 1 6.80e-07 C GGCTGAAAATT GACTGAAAAT
ce6_ct_phastv6officialfilt2_chrV.14461 - 28 9.26e-07 GGCTCAAAATC AATATTTTTT
ce6_ct_phastv6officialfilt2_chrII.975 - 6 1.17e-06 GTGTTTTTTC GGCGGAAAATG ACACAA
ce6_ct_phastv6officialfilt2_chrV.14563 + 12 1.17e-06 TCCGAATTTA GGCTCAAAATG CTCCAAATTT
ce6_ct_phastv6officialfilt2_chrV.3312 + 27 1.17e-06 AACAGAGCTT GGCTCAAAATG CCAAGGAGCA
ce6_ct_phastv6officialfilt2_chrIII.13667 - 13 1.52e-06 CACTAAAATT GACTGAAAATC TCAATTTTCT
ce6_ct_phastv6officialfilt2_chrIII.1469 + 3 1.52e-06 AAT GACTGAAAATC GTGGATTTTT
ce6_ct_phastv6officialfilt2_chrIII.1211 - 0 1.52e-06 ATCGATTTCT GACTGAAAATC
ce6_ct_phastv6officialfilt2_chrII.1625 + 23 1.52e-06 GACTGAAATT GACTGAAAATC AGG
ce6_ct_phastv6officialfilt2_chrII.551 + 21 1.52e-06 GGCTGAAATT GACTGAAAATC GAATA
ce6_ct_phastv6officialfilt2_chrII.44 - 30 1.52e-06 TTGGACACTG GACTGAAAATC GGATACGAAC
ce6_ct_phastv6officialfilt2_chrV.14356 + 12 1.52e-06 GCTGAAAATT GACTGAAAATC AACTTT
ce6_ct_phastv6officialfilt2_chrI.15401 - 8 1.52e-06 ATATGA GACTGAAAATC TGGGAATT
ce6_ct_phastv6officialfilt2_chrIII.1856 - 10 2.38e-06 TTTTT GGCTCAAAATT TCTAGTTTTT
ce6_ct_phastv6officialfilt2_chrIII.1651 - 6 2.38e-06 GGTAGAAACT GGCTCAAAATT TGAAAA
ce6_ct_phastv6officialfilt2_chrIII.1275 + 15 2.38e-06 GTCATAACTT GGCTCAAAATT GAGCTAAAAC
ce6_ct_phastv6officialfilt2_chrV.15278 - 7 2.38e-06 ACGGATTT AGCTGAAAATC GATGGAA
ce6_ct_phastv6officialfilt2_chrV.12867 - 35 2.38e-06 TTC GGCGGAAAATT CTCGACGAAA
ce6_ct_phastv6officialfilt2_chrI.15386 + 12 2.38e-06 TGAGGTTTTT GGCTCAAAATT TGA
ce6_ct_phastv6officialfilt2_chrI.7097 - 13 2.38e-06 AGCT GGCTCAAAATT CAAAATTTCC
ce6_ct_phastv6officialfilt2_chrIII.15833 - 14 2.89e-06 GAC GACTGAAAATG ATGACAATTT
ce6_ct_phastv6officialfilt2_chrI.8573 - 11 2.89e-06 TC GACTGAAAATG TTCTCGAAAT
ce6_ct_phastv6officialfilt2_chrIII.897 - 1 3.24e-06 GTCATTTTGA AGCTGAAAATG T
ce6_ct_phastv6officialfilt2_chrI.7046 + 61 3.24e-06 AGGTGAGAAG AGCTGAAAATG AGGAT
ce6_ct_phastv6officialfilt2_chrIII.1702 + 7 4.13e-06 GGGAATT GGCTGAAAAAG AACGGA
ce6_ct_phastv6officialfilt2_chrIV.14189 + 29 4.13e-06 TTTATTTTTC GGCTGAAAAAG TTGTTT
ce6_ct_phastv6officialfilt2_chrI.15557 + 46 4.13e-06 GAAAAACTTT GACTGAAAATT TTTGACAA
ce6_ct_phastv6officialfilt2_chrI.14220 + 11 4.13e-06 CAGATTTTAG GGCTGAAAAAG TGAT
ce6_ct_phastv6officialfilt2_chrIV.15914 - 8 4.86e-06 GTAGTTTTCA AGCTGAAAATT GCTGTGAA
ce6_ct_phastv6officialfilt2_chrIV.15795 - 6 4.86e-06 AAGCAAAAAA AGCTGAAAATT CGAGTT
ce6_ct_phastv6officialfilt2_chrIV.1982 - 15 4.86e-06 TTGG AGCTGAAAATT TTGGAAAAAA
ce6_ct_phastv6officialfilt2_chrII.13412 - 2 4.86e-06 GCTAAAAATT AGCTGAAAATT TA
ce6_ct_phastv6officialfilt2_chrX.78 - 17 4.86e-06 ATCGATTTTT AGCTGAAAATT AGAGTTTTTC
ce6_ct_phastv6officialfilt2_chrIII.1473 - 38 5.20e-06 TCT GGCTGAAAAAT CATATTTTTT
ce6_ct_phastv6officialfilt2_chrII.1279 + 7 5.20e-06 GAAATTT GGCTGAAAAAT GAT
ce6_ct_phastv6officialfilt2_chrIV.14992 - 8 5.63e-06 TCCGGAAAAA TGCTGAAAATC GTGATTTA
ce6_ct_phastv6officialfilt2_chrV.1683 + 22 5.63e-06 CGCCAAAAAT TGCTGAAAATC AATTTCTAC
ce6_ct_phastv6officialfilt2_chrX.3245 - 34 5.71e-06 ATGAATAGTT GGCGCAAAATG CGAAATTCAT
ce6_ct_phastv6officialfilt2_chrIV.15269 - 54 6.57e-06 AAAAAT GACGGAAAATC ACGAAAATTC
ce6_ct_phastv6officialfilt2_chrII.1789 - 17 7.25e-06 TTCCAC AGCTCAAAATC TCTCGATTTT
ce6_ct_phastv6officialfilt2_chrX.3173 + 0 7.25e-06 AGCGGAAAATC GATGCGAGAC
ce6_ct_phastv6officialfilt2_chrII.13761 - 25 8.90e-06 GCTAAAAATT TGCTGAAAATT GGCAAAAATA
ce6_ct_phastv6officialfilt2_chrII.1789 + 2 8.90e-06 AA GCCTGAAAATC GAGAGATTTT
ce6_ct_phastv6officialfilt2_chrI.13938 - 15 8.90e-06 AGGTGAAAG TGCTGAAAATT GAATTTTTTA

Motif 27 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrII.7181 1.66e-07

-27
ce6_ct_phastv6officialfilt2_chrV.15315 1.66e-07

-27
ce6_ct_phastv6officialfilt2_chrIII.1659 3.33e-07

+27
ce6_ct_phastv6officialfilt2_chrI.15668 3.33e-07

-27
ce6_ct_phastv6officialfilt2_chrIII.1799 6.80e-07

-27
ce6_ct_phastv6officialfilt2_chrIV.2531 6.80e-07

-27
ce6_ct_phastv6officialfilt2_chrV.14356 6.80e-07

+27
+27
ce6_ct_phastv6officialfilt2_chrV.14461 9.26e-07

-27
ce6_ct_phastv6officialfilt2_chrII.975 1.17e-06

-27
ce6_ct_phastv6officialfilt2_chrV.14563 1.17e-06

+27
ce6_ct_phastv6officialfilt2_chrV.3312 1.17e-06

+27
ce6_ct_phastv6officialfilt2_chrIII.13667 1.52e-06

-27
ce6_ct_phastv6officialfilt2_chrIII.1469 1.52e-06

+27
ce6_ct_phastv6officialfilt2_chrIII.1211 1.52e-06

-27
ce6_ct_phastv6officialfilt2_chrII.1625 1.52e-06

+27
ce6_ct_phastv6officialfilt2_chrII.551 1.52e-06

+27
ce6_ct_phastv6officialfilt2_chrII.44 1.52e-06

-27
ce6_ct_phastv6officialfilt2_chrI.15401 1.52e-06

-27
ce6_ct_phastv6officialfilt2_chrIII.1856 2.38e-06

-27
ce6_ct_phastv6officialfilt2_chrIII.1651 2.38e-06

-27
ce6_ct_phastv6officialfilt2_chrIII.1275 2.38e-06

+27
ce6_ct_phastv6officialfilt2_chrV.15278 2.38e-06

-27
ce6_ct_phastv6officialfilt2_chrV.12867 2.38e-06

-27
ce6_ct_phastv6officialfilt2_chrI.15386 2.38e-06

+27
ce6_ct_phastv6officialfilt2_chrI.7097 2.38e-06

-27
ce6_ct_phastv6officialfilt2_chrIII.15833 2.89e-06

-27
ce6_ct_phastv6officialfilt2_chrI.8573 2.89e-06

-27
ce6_ct_phastv6officialfilt2_chrIII.897 3.24e-06

-27
ce6_ct_phastv6officialfilt2_chrI.7046 3.24e-06

+27
ce6_ct_phastv6officialfilt2_chrIII.1702 4.13e-06

+27
ce6_ct_phastv6officialfilt2_chrIV.14189 4.13e-06

+27
ce6_ct_phastv6officialfilt2_chrI.15557 4.13e-06

+27
ce6_ct_phastv6officialfilt2_chrI.14220 4.13e-06

+27
ce6_ct_phastv6officialfilt2_chrIV.15914 4.86e-06

-27
ce6_ct_phastv6officialfilt2_chrIV.15795 4.86e-06

-27
ce6_ct_phastv6officialfilt2_chrIV.1982 4.86e-06

-27
ce6_ct_phastv6officialfilt2_chrII.13412 4.86e-06

-27
ce6_ct_phastv6officialfilt2_chrX.78 4.86e-06

-27
ce6_ct_phastv6officialfilt2_chrIII.1473 5.20e-06

-27
ce6_ct_phastv6officialfilt2_chrII.1279 5.20e-06

+27
ce6_ct_phastv6officialfilt2_chrIV.14992 5.63e-06

-27
ce6_ct_phastv6officialfilt2_chrV.1683 5.63e-06

+27
ce6_ct_phastv6officialfilt2_chrX.3245 5.71e-06

-27
ce6_ct_phastv6officialfilt2_chrIV.15269 6.57e-06

-27
ce6_ct_phastv6officialfilt2_chrII.1789 7.25e-06

+27
-27
ce6_ct_phastv6officialfilt2_chrX.3173 7.25e-06

+27
ce6_ct_phastv6officialfilt2_chrII.13761 8.90e-06

-27
ce6_ct_phastv6officialfilt2_chrI.13938 8.90e-06

-27
SCALE
| | | |
1 25 50 75

Motif 27 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 27 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 27 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 27 regular-expression

[GA][GA]CT[GC]AAAAT[TCG]

Time 71448.78 secs.

P N
MOTIF 28 width = 11 sites = 28 llr = 340 E-value = 2.4e-009

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
17.0 (bits)
Relative Entropy
17.5 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIV.2075 + 5 1.66e-07 GTAAA TGGCCTAGAAA CCGAAATCCT
ce6_ct_phastv6officialfilt2_chrI.14086 + 5 1.66e-07 TACGT TGGCCTAGAAA TCCAGAAAT
ce6_ct_phastv6officialfilt2_chrI.4239 + 23 1.66e-07 AAAAAAAATG TGGCCTAGAAA AAACCAGAAA
ce6_ct_phastv6officialfilt2_chrI.2057 + 4 1.66e-07 TGAG TGGCCTAGAAA AGTTTTCGGT
ce6_ct_phastv6officialfilt2_chrI.1949 + 12 1.66e-07 ATTTGCCACG TGGCCTAGAAA AAGCGA
ce6_ct_phastv6officialfilt2_chrI.1825 + 1 1.66e-07 G TGGCCTAGAAA TCCAAAATTC
ce6_ct_phastv6officialfilt2_chrI.183 + 0 1.66e-07 TGGCCTAGAAA TCCAAAAAGT
ce6_ct_phastv6officialfilt2_chrV.14752 + 28 3.26e-07 TTGAGGAAAA TGGCCCAGAAA TCGCT
ce6_ct_phastv6officialfilt2_chrIV.1686 - 22 4.85e-07 CTTTTCTAGG TGGCCTAGGAA AAGCGAAAAC
ce6_ct_phastv6officialfilt2_chrIII.9271 + 31 5.62e-07 AACCAATTGA GGGCCGAGAAA TTGAAAA
ce6_ct_phastv6officialfilt2_chrIII.2388 - 22 5.62e-07 AATTC TGGCCGAGGAA ATTGAAAACT
ce6_ct_phastv6officialfilt2_chrX.1210 + 15 5.62e-07 TACAGTGTAC GGGCCGAGAAA CGGTAGAGAA
ce6_ct_phastv6officialfilt2_chrV.8870 - 57 5.62e-07 CGATAAAAA TGGCCGAGGAA CCCGAGAAAA
ce6_ct_phastv6officialfilt2_chrIV.1945 - 29 1.08e-06 AAATAAAGA TGGCCTAAAAA CCCAAAATAA
ce6_ct_phastv6officialfilt2_chrI.196 - 48 1.08e-06 G TGGGCTAGAAA TCCAAATGTG
ce6_ct_phastv6officialfilt2_chrIII.13270 - 4 1.50e-06 TAGATTGA TGACCTAGAAA ATCA
ce6_ct_phastv6officialfilt2_chrV.15164 - 10 1.50e-06 CATAAAATTT TGACCTAGAAA AATTTTACCC
ce6_ct_phastv6officialfilt2_chrII.13762 - 19 2.13e-06 TTTTGGGTGG TGGCCGAAAAA ACCAAAACTC
ce6_ct_phastv6officialfilt2_chrX.6026 + 30 2.13e-06 GTTCATATCG TGTCCTAGAAA TCTCATCTCT
ce6_ct_phastv6officialfilt2_chrIII.1140 - 14 2.73e-06 TTCGCAAAAA TGGCCCAAAAA ACGATTTTCT
ce6_ct_phastv6officialfilt2_chrIV.776 - 16 3.59e-06 CTGTTAA TGGTCTAGAAA CCCAAAACTA
ce6_ct_phastv6officialfilt2_chrII.13981 - 12 3.59e-06 CTACGACTGG TGGACTAGAAA TACAAGTGCC
ce6_ct_phastv6officialfilt2_chrIII.9096 + 22 5.12e-06 TCACTCAAAT TGGCATAGAAA AACATTTCGA
ce6_ct_phastv6officialfilt2_chrII.14866 + 0 5.12e-06 TGGCTTAGAAA TCCAAATTTA
ce6_ct_phastv6officialfilt2_chrI.13983 + 1 5.12e-06 C GGGCCTAAAAA AGCCTGAAAA
ce6_ct_phastv6officialfilt2_chrI.2819 - 23 5.12e-06 TCG TAGCCTAGAAA ACAAAAACTC
ce6_ct_phastv6officialfilt2_chrII.1503 - 17 5.64e-06 AATTCCAATT TGTCCCAGAAA AACTGAAAAT
ce6_ct_phastv6officialfilt2_chrII.944 + 7 9.84e-06 TAAATTT TGAGCTAGAAA GC

Motif 28 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIV.2075 1.66e-07

+28
ce6_ct_phastv6officialfilt2_chrI.14086 1.66e-07

+28
ce6_ct_phastv6officialfilt2_chrI.4239 1.66e-07

+28
ce6_ct_phastv6officialfilt2_chrI.2057 1.66e-07

+28
ce6_ct_phastv6officialfilt2_chrI.1949 1.66e-07

+28
ce6_ct_phastv6officialfilt2_chrI.1825 1.66e-07

+28
ce6_ct_phastv6officialfilt2_chrI.183 1.66e-07

+28
ce6_ct_phastv6officialfilt2_chrV.14752 3.26e-07

+28
ce6_ct_phastv6officialfilt2_chrIV.1686 4.85e-07

-28
ce6_ct_phastv6officialfilt2_chrIII.9271 5.62e-07

+28
ce6_ct_phastv6officialfilt2_chrIII.2388 5.62e-07

-28
ce6_ct_phastv6officialfilt2_chrX.1210 5.62e-07

+28
ce6_ct_phastv6officialfilt2_chrV.8870 5.62e-07

-28
ce6_ct_phastv6officialfilt2_chrIV.1945 1.08e-06

-28
ce6_ct_phastv6officialfilt2_chrI.196 1.08e-06

-28
ce6_ct_phastv6officialfilt2_chrIII.13270 1.50e-06

-28
ce6_ct_phastv6officialfilt2_chrV.15164 1.50e-06

-28
ce6_ct_phastv6officialfilt2_chrII.13762 2.13e-06

-28
ce6_ct_phastv6officialfilt2_chrX.6026 2.13e-06

+28
ce6_ct_phastv6officialfilt2_chrIII.1140 2.73e-06

-28
ce6_ct_phastv6officialfilt2_chrIV.776 3.59e-06

-28
ce6_ct_phastv6officialfilt2_chrII.13981 3.59e-06

-28
ce6_ct_phastv6officialfilt2_chrIII.9096 5.12e-06

+28
ce6_ct_phastv6officialfilt2_chrII.14866 5.12e-06

+28
ce6_ct_phastv6officialfilt2_chrI.13983 5.12e-06

+28
ce6_ct_phastv6officialfilt2_chrI.2819 5.12e-06

-28
ce6_ct_phastv6officialfilt2_chrII.1503 5.64e-06

-28
ce6_ct_phastv6officialfilt2_chrII.944 9.84e-06

+28
SCALE
| | | |
1 25 50 75

Motif 28 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 28 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 28 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 28 regular-expression

TGGCCTAGAAA

Time 73796.58 secs.

P N
MOTIF 29 width = 18 sites = 11 llr = 190 E-value = 1.3e-002

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
24.1 (bits)
Relative Entropy
24.9 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrX.7935 - 28 4.71e-10 CTATTTTTCT ACACATACACATACACAC AAAACTCACT
ce6_ct_phastv6officialfilt2_chrX.1759 + 3 4.71e-10 CTC ACACATACACATACACAC AAAGTAGC
ce6_ct_phastv6officialfilt2_chrV.10333 - 31 5.79e-10 ATCTGATGAA GCACATACACACATACAC ACAACGGCAC
ce6_ct_phastv6officialfilt2_chrIV.11820 - 16 1.26e-09 AGAGATACAC CCGCATACATACACACAC CGTTTTGTAT
ce6_ct_phastv6officialfilt2_chrIV.12095 - 0 2.56e-09 AAGGCC ACACATACACACAAATAC
ce6_ct_phastv6officialfilt2_chrIII.11274 + 33 3.43e-09 AAATTCGCTC CCACTCACACACACATAC
ce6_ct_phastv6officialfilt2_chrI.1700 - 47 8.31e-09 GCTGCATACA ACACACACATACACACAG ACAACTCATG
ce6_ct_phastv6officialfilt2_chrII.13150 + 15 9.89e-09 AAAAATTGAA ATGCATACACACACACAT
ce6_ct_phastv6officialfilt2_chrII.9531 - 29 2.72e-08 TC ACACACGCACACATGTAC AGATTTACAA
ce6_ct_phastv6officialfilt2_chrX.6823 + 6 4.40e-08 GAATGC GTACATACGCCCGCATAC CACCCTCTTA
ce6_ct_phastv6officialfilt2_chrV.8496 - 10 5.04e-08 CTTCTCGGAA ATGCATACGCACAGCTAC ATAAAACTGG

Motif 29 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrX.7935 4.71e-10

-29
ce6_ct_phastv6officialfilt2_chrX.1759 4.71e-10

+29
ce6_ct_phastv6officialfilt2_chrV.10333 5.79e-10

-29
ce6_ct_phastv6officialfilt2_chrIV.11820 1.26e-09

-29
ce6_ct_phastv6officialfilt2_chrIV.12095 2.56e-09

-29
ce6_ct_phastv6officialfilt2_chrIII.11274 3.43e-09

+29
ce6_ct_phastv6officialfilt2_chrI.1700 8.31e-09

-29
ce6_ct_phastv6officialfilt2_chrII.13150 9.89e-09

+29
ce6_ct_phastv6officialfilt2_chrII.9531 2.72e-08

-29
ce6_ct_phastv6officialfilt2_chrX.6823 4.40e-08

+29
ce6_ct_phastv6officialfilt2_chrV.8496 5.04e-08

-29
SCALE
| | | | |
1 25 50 75 100

Motif 29 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 29 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 29 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 29 regular-expression

A[CT][AG]CA[TC]ACACACACA[CT]AC

Time 76136.94 secs.

P N
MOTIF 30 width = 8 sites = 30 llr = 331 E-value = 1.9e-002

SEQUENCE LOGO PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Information Content
12.7 (bits)
Relative Entropy
15.9 (bits)
Download LOGO
Without SSC:[EPS][PNG]
With SSC:[EPS][PNG]
NAME STRAND START P-VALUE SITES
ce6_ct_phastv6officialfilt2_chrIII.13126 + 11 2.07e-06 GCCAGATTTG CGCGCCAA AATGAAC
ce6_ct_phastv6officialfilt2_chrIII.1406 + 24 2.07e-06 CGTTGTTTTT CGCGCCAA A
ce6_ct_phastv6officialfilt2_chrIV.2181 - 2 2.07e-06 CATCGCACAC CGCGCCAA AT
ce6_ct_phastv6officialfilt2_chrIV.1183 + 11 2.07e-06 GAATTTTAAG CGCGCCAA ACTGA
ce6_ct_phastv6officialfilt2_chrX.11826 - 4 2.07e-06 GTGTTTGTAG CGCGCCAA ACGG
ce6_ct_phastv6officialfilt2_chrX.3412 + 15 2.07e-06 GTCGTGCAAA CGCGCCAA AAATCTGGTA
ce6_ct_phastv6officialfilt2_chrV.4543 + 8 2.07e-06 ACATGAAA CGCGCCAA CGTTACGTCA
ce6_ct_phastv6officialfilt2_chrI.8488 + 13 2.07e-06 AATCCGAAAA CGCGCCAA CGAGTTCTTG
ce6_ct_phastv6officialfilt2_chrII.1305 - 1 3.05e-06 ATTCAAACCT CGCGCCGA A
ce6_ct_phastv6officialfilt2_chrV.2208 - 17 3.05e-06 CGCGCCGA CTTCGTGAGA
ce6_ct_phastv6officialfilt2_chrI.9320 - 9 3.05e-06 ATTCAAATTT CGCGCCGA AAAAATAGC
ce6_ct_phastv6officialfilt2_chrI.64 - 18 3.05e-06 TCCGCATTTT CGCGCCGA GACCACTACA
ce6_ct_phastv6officialfilt2_chrIII.11741 - 6 5.12e-06 GAAAAAAAAA GGCGCCAA ATCATC
ce6_ct_phastv6officialfilt2_chrIV.2944 - 12 5.12e-06 ATTTTGAATT GGCGCCAA GGCAATCTTC
ce6_ct_phastv6officialfilt2_chrIV.1820 + 18 5.12e-06 ATTTGAATTT GGCGCCAA AATTTTT
ce6_ct_phastv6officialfilt2_chrX.12390 + 5 5.12e-06 CCTGA GGCGCCAA AAAAAAATTG
ce6_ct_phastv6officialfilt2_chrI.14230 + 10 5.12e-06 TTTCAAATTT GGCGCCAA ATTCAAAAAA
ce6_ct_phastv6officialfilt2_chrIV.4781 - 28 7.18e-06 CGCGCGAA ATATAATCGC
ce6_ct_phastv6officialfilt2_chrI.8489 - 22 7.18e-06 GGCGTG CGCGCGAA ACTTGAAAAT
ce6_ct_phastv6officialfilt2_chrI.2125 - 20 7.18e-06 CGCG CGCGCGAA ATGTTTGAAT
ce6_ct_phastv6officialfilt2_chrX.9611 - 16 1.02e-05 GTCAATTAAC CGCGCCAT CATCTGCCAC
ce6_ct_phastv6officialfilt2_chrX.7755 + 49 1.02e-05 TGTCATAGAA CGCGCCAT ATTTCATCTG
ce6_ct_phastv6officialfilt2_chrI.2439 + 7 1.02e-05 CCTAACG CGCGCCAT TCGCCACGAT
ce6_ct_phastv6officialfilt2_chrX.14656 - 27 1.12e-05 TGATTTTAAT CGCGCCAG TAGTCAGGTA
ce6_ct_phastv6officialfilt2_chrX.7633 - 2 1.22e-05 TCGTTCCAGA CGCGCGGA TT
ce6_ct_phastv6officialfilt2_chrX.3687 - 39 1.22e-05 CGCGCGGA TTCACCGATG
ce6_ct_phastv6officialfilt2_chrIV.2711 + 13 1.37e-05 CTAAACAACG CGCGCCGG T
ce6_ct_phastv6officialfilt2_chrIV.3317 - 16 1.57e-05 GGTAAATTGA GGCGCGAA GTTTCATTCG
ce6_ct_phastv6officialfilt2_chrIV.12700 + 13 1.78e-05 GTACCCGACT GGCGCCAT GTAAGCTCAT
ce6_ct_phastv6officialfilt2_chrII.4212 + 3 1.78e-05 CGC GGCGCCAT CGGCCAGAAG

Motif 30 block diagrams


Name
Lowest
p-value
Motifs
ce6_ct_phastv6officialfilt2_chrIII.13126 2.07e-06

+30
ce6_ct_phastv6officialfilt2_chrIII.1406 2.07e-06

+30
ce6_ct_phastv6officialfilt2_chrIV.2181 2.07e-06

-30
ce6_ct_phastv6officialfilt2_chrIV.1183 2.07e-06

+30
ce6_ct_phastv6officialfilt2_chrX.11826 2.07e-06

-30
ce6_ct_phastv6officialfilt2_chrX.3412 2.07e-06

+30
ce6_ct_phastv6officialfilt2_chrV.4543 2.07e-06

+30
ce6_ct_phastv6officialfilt2_chrI.8488 2.07e-06

+30
ce6_ct_phastv6officialfilt2_chrII.1305 3.05e-06

-30
ce6_ct_phastv6officialfilt2_chrV.2208 3.05e-06

-30
ce6_ct_phastv6officialfilt2_chrI.9320 3.05e-06

-30
ce6_ct_phastv6officialfilt2_chrI.64 3.05e-06

-30
ce6_ct_phastv6officialfilt2_chrIII.11741 5.12e-06

-30
ce6_ct_phastv6officialfilt2_chrIV.2944 5.12e-06

-30
ce6_ct_phastv6officialfilt2_chrIV.1820 5.12e-06

+30
ce6_ct_phastv6officialfilt2_chrX.12390 5.12e-06

+30
ce6_ct_phastv6officialfilt2_chrI.14230 5.12e-06

+30
ce6_ct_phastv6officialfilt2_chrIV.4781 7.18e-06

-30
ce6_ct_phastv6officialfilt2_chrI.8489 7.18e-06

-30
ce6_ct_phastv6officialfilt2_chrI.2125 7.18e-06

-30
ce6_ct_phastv6officialfilt2_chrX.9611 1.02e-05

-30
ce6_ct_phastv6officialfilt2_chrX.7755 1.02e-05

+30
ce6_ct_phastv6officialfilt2_chrI.2439 1.02e-05

+30
ce6_ct_phastv6officialfilt2_chrX.14656 1.12e-05

-30
ce6_ct_phastv6officialfilt2_chrX.7633 1.22e-05

-30
ce6_ct_phastv6officialfilt2_chrX.3687 1.22e-05

-30
ce6_ct_phastv6officialfilt2_chrIV.2711 1.37e-05

+30
ce6_ct_phastv6officialfilt2_chrIV.3317 1.57e-05

-30
ce6_ct_phastv6officialfilt2_chrIV.12700 1.78e-05

+30
ce6_ct_phastv6officialfilt2_chrII.4212 1.78e-05

+30
SCALE
| | | |
1 25 50 75

Motif 30 in BLOCKS format


to BLOCKS multiple alignment processor.
Motif 30 position-specific scoring matrix


Scan sequence databases for the best match in each sequence using MAST.
Motif 30 position-specific probability matrix


Scan sequence databases for all matches with this motif using FIMO.
Compare to known motifs in motif databases using Tomtom.
Find Genome Ontology terms associated with upstream regions matching this motif using GOMO.
Motif 30 regular-expression

[CG]GCGC[CG][AG]A

Time 78482.83 secs.

P N
SUMMARY OF MOTIFS


Combined block diagrams: non-overlapping sites with p-value < 0.0001


Name
Combined
p-value

Motifs
ce6_ct_phastv6officialfilt2_chrI.1 1.81e-21

-7
ce6_ct_phastv6officialfilt2_chrI.18 3.60e-15

+10
ce6_ct_phastv6officialfilt2_chrI.28 1.95e-05

+16
-9
ce6_ct_phastv6officialfilt2_chrI.64 3.83e-17

+11
ce6_ct_phastv6officialfilt2_chrI.183 2.30e-03

+28
ce6_ct_phastv6officialfilt2_chrI.184 8.27e-16

-28
+20
ce6_ct_phastv6officialfilt2_chrI.196 2.13e-07

-10
-28
ce6_ct_phastv6officialfilt2_chrI.197 1.87e-12

-3
ce6_ct_phastv6officialfilt2_chrI.284 2.61e-01

+30
ce6_ct_phastv6officialfilt2_chrI.342 1.72e-01

+27
ce6_ct_phastv6officialfilt2_chrI.408 8.46e-06

+2
ce6_ct_phastv6officialfilt2_chrI.587 1.27e-11

+20
ce6_ct_phastv6officialfilt2_chrI.713 2.92e-16

+3
+20
ce6_ct_phastv6officialfilt2_chrI.777 1.99e-10

+10
-3
ce6_ct_phastv6officialfilt2_chrI.836 6.98e-02

+15
ce6_ct_phastv6officialfilt2_chrI.842 1.50e-07

+2
ce6_ct_phastv6officialfilt2_chrI.892 2.14e-09

-10
ce6_ct_phastv6officialfilt2_chrI.1088 3.24e-19

-11
ce6_ct_phastv6officialfilt2_chrI.1089 1.55e-04

-15
ce6_ct_phastv6officialfilt2_chrI.1100 7.48e-05

-19
ce6_ct_phastv6officialfilt2_chrI.1171 1.11e-09

-2
ce6_ct_phastv6officialfilt2_chrI.1172 4.64e-03

+2
ce6_ct_phastv6officialfilt2_chrI.1188 3.41e-13

+1
ce6_ct_phastv6officialfilt2_chrI.1205 3.50e-06

+13
ce6_ct_phastv6officialfilt2_chrI.1206 7.07e-13

-10
ce6_ct_phastv6officialfilt2_chrI.1242 3.94e-07

-8
ce6_ct_phastv6officialfilt2_chrI.1326 1.10e-07

+2
ce6_ct_phastv6officialfilt2_chrI.1462 6.97e-09

-4
ce6_ct_phastv6officialfilt2_chrI.1529 9.61e-01

+27
ce6_ct_phastv6officialfilt2_chrI.1534 1.97e-09

-2
ce6_ct_phastv6officialfilt2_chrI.1580 1.06e-04

-21
ce6_ct_phastv6officialfilt2_chrI.1600 1.38e-06

-11
ce6_ct_phastv6officialfilt2_chrI.1671 1.00e-06

-7
ce6_ct_phastv6officialfilt2_chrI.1700 1.55e-03

-29
ce6_ct_phastv6officialfilt2_chrI.1757 5.99e-17

+7
ce6_ct_phastv6officialfilt2_chrI.1809 6.61e-04

+1
ce6_ct_phastv6officialfilt2_chrI.1824 2.99e-09

+2
ce6_ct_phastv6officialfilt2_chrI.1825 3.65e-14

+28
+20
+5
+10
ce6_ct_phastv6officialfilt2_chrI.1826 1.29e-19

+10
-10
ce6_ct_phastv6officialfilt2_chrI.1827 8.08e-14

+10
ce6_ct_phastv6officialfilt2_chrI.1949 5.98e-15

+28
ce6_ct_phastv6officialfilt2_chrI.1950 3.56e-08

-10
ce6_ct_phastv6officialfilt2_chrI.2018 2.83e-11

-20
-10
ce6_ct_phastv6officialfilt2_chrI.2057 1.84e-10

+3
+3
ce6_ct_phastv6officialfilt2_chrI.2099 2.00e-06

+16
ce6_ct_phastv6officialfilt2_chrI.2125 1.63e-04

-30
ce6_ct_phastv6officialfilt2_chrI.2192 4.26e-15

-10
ce6_ct_phastv6officialfilt2_chrI.2273 2.00e-10

+3
-10
ce6_ct_phastv6officialfilt2_chrI.2421 1.03e-11

-6
ce6_ct_phastv6officialfilt2_chrI.2439 1.93e-08

+30
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ce6_ct_phastv6officialfilt2_chrIII.14083 5.63e-15

-1
ce6_ct_phastv6officialfilt2_chrIII.14088 8.08e-15

-13
-1
ce6_ct_phastv6officialfilt2_chrIII.14225 1.10e-18

+4
+21
ce6_ct_phastv6officialfilt2_chrIII.14239 5.20e-13

-1
ce6_ct_phastv6officialfilt2_chrIII.14240 5.35e-19

+1
ce6_ct_phastv6officialfilt2_chrIII.14268 1.42e-03

-5
ce6_ct_phastv6officialfilt2_chrIII.14501 3.20e-07

-2
ce6_ct_phastv6officialfilt2_chrIII.14594 1.56e-01

+9
ce6_ct_phastv6officialfilt2_chrIII.14621 1.88e-09

+13
ce6_ct_phastv6officialfilt2_chrIII.14661 5.13e-15

-1
ce6_ct_phastv6officialfilt2_chrIII.14666 4.40e-13

-14
ce6_ct_phastv6officialfilt2_chrIII.14687 4.70e-05

+16
ce6_ct_phastv6officialfilt2_chrIII.14707 1.63e-18

-1
ce6_ct_phastv6officialfilt2_chrIII.14779 8.14e-04

+16
+9
ce6_ct_phastv6officialfilt2_chrIII.14807 9.81e-01

-15
ce6_ct_phastv6officialfilt2_chrIII.14959 1.36e-05

-19
ce6_ct_phastv6officialfilt2_chrIII.15031 1.41e-12

-6
ce6_ct_phastv6officialfilt2_chrIII.15032 1.02e-12

-6
ce6_ct_phastv6officialfilt2_chrIII.15185 1.42e-03

+8
ce6_ct_phastv6officialfilt2_chrIII.15187 9.08e-16

-1
ce6_ct_phastv6officialfilt2_chrIII.15345 4.01e-06

-5
-1
ce6_ct_phastv6officialfilt2_chrIII.15386 2.17e-07

+5
ce6_ct_phastv6officialfilt2_chrIII.15602 7.95e-01

+27
ce6_ct_phastv6officialfilt2_chrIII.15833 4.04e-01

-27
ce6_ct_phastv6officialfilt2_chrIII.15851 2.09e-08

+10
ce6_ct_phastv6officialfilt2_chrIII.15858 6.27e-09

+11
ce6_ct_phastv6officialfilt2_chrIII.15884 1.42e-08

+30
SCALE
| | | | | | | |
1 25 50 75 100 125 150

Motif summary in machine readable format.
Stopped because Stopped because motif E-value > 5.00e-02..



CPU: redivivus


EXPLANATION OF MEME RESULTS


The MEME results consist of:

MOTIFS

For each motif that it discovers in the training set, MEME prints the following information: