[BEGIN]
REFERENCE HAIRPIN
**************************************************************************************
ID : mmu-mir-99a
DESCRIPTION : mmu-mir-99a MI0000146 Mus musculus miR-99a stem-loop
CHROMOSOME : 16
SPAN : 77599181 - 77599245
LENGTH : 65
SEQUENCE : CATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGACCGCGCAAGCTCGTTTCTATGGGTCTGTG
OVERHANG THRESHOLD : 40%
**************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-99a
ACCID : MI0000146
PARENT : mmu-mir-99a
CHROMOSOME : 16
START : 77599181
STOP : 77599245
OFFSET : 5..26
SEQUENCE : AACCCGTAGATCCGATCTTGTG
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________
CATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGACCGCGCAAGCTCGTTTCTATGGGTCTGTG REF 16 77599181 - 77599245
AACCCGTAGATCCGATCTTGTG MATURE 16 77599186 - 77599271 mmu-miR-99a +
_________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......CCCGTAGATCCGATCTTGTG........................................ 28847_1_0_0_0_0_2 MATURE 3 25.00 1 20.00 2 28.57 20
.....ACCCGTAGATCCGATCTTGTG........................................ 11268_0_0_0_0_0_2 MATURE 2 16.67 0 0.00 2 28.57 21
......CCCGTAGATCCGATCTTGTa........................................ 37778_0_0_0_0_0_2 MATURE 2 16.67 0 0.00 2 28.57 19
....AACCCGTAGATCCGATCgTGTGa....................................... 42677_1_0_0_0_0_0 MATURE 1 8.33 1 20.00 0 0.00 17G4
....AACCCGTAGATCCGATCTTGTGaTG..................................... 31630_0_0_0_0_0_1 MATURE 1 8.33 0 0.00 1 14.29 22A2
....AACCCGTAGATCCGATCTTaTGa....................................... 35185_1_0_0_0_0_0 MATURE 1 8.33 1 20.00 0 0.00 19A2
.....ACCCGTAGATCCGATCTTaTG........................................ 33007_1_0_0_0_0_0 MATURE 1 8.33 1 20.00 0 0.00 18A2
....AACCCGTAGATCCGATCTTGTGa....................................... 21799_1_0_0_0_0_0 MATURE 1 8.33 1 20.00 0 0.00 22
---------- ---------- ----------
12 5 7
(41.67) (58.33)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 5 7 12 100.00%
---------- ---------- ----------
5 7 12
[END]