[BEGIN]
REFERENCE HAIRPIN
****************************************************************************************************************
ID : mmu-mir-92a-2
DESCRIPTION : mmu-mir-92a-2 MI0000580 Mus musculus miR-92a-2 stem-loop
CHROMOSOME : X
SPAN : 50095015 - 50095105
LENGTH : 91
SEQUENCE : TGCCCATTCATCCACAGGTGGGGATTGGTGGCATTACTTGTGTTAGATATAAAGTATTGCACTTGTCCCGGCCTGAGGAAGAAAGAGGGTT
OVERHANG THRESHOLD : 40%
****************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-92a
ACCID : MI0000580
PARENT : mmu-mir-92a-2
CHROMOSOME : X
START : 50095015
STOP : 50095105
OFFSET : 55..75
SEQUENCE : TATTGCACTTGTCCCGGCCTG
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-92a*
ACCID : MI0000580
PARENT : mmu-mir-92a-2
CHROMOSOME : X
START : 50095015
STOP : 50095105
OFFSET : 16..37
SEQUENCE : AGGTGGGGATTGGTGGCATTAC
STRAND : -
******************************
*** MATURE ***
___________________________________________________________________________________________
TGCCCATTCATCCACAGGTGGGGATTGGTGGCATTACTTGTGTTAGATATAAAGTATTGCACTTGTCCCGGCCTGAGGAAGAAAGAGGGTT REF X 50095015 - 50095105
TATTGCACTTGTCCCGGCCTG MATURE X 50095070 - 50095180 mmu-miR-92a -
AGGTGGGGATTGGTGGCATTAC MATURESTAR X 50095031 - 50095142 mmu-miR-92a* -
___________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....................................................GTATTGCACTTGTCCCGGCCTGAt............... 34024_58_0_0_0_0_133 MATURE 191 16.49 58 10.45 133 22.06 23
....................................................AGTATTGCACTTGTCCCGGCCTGAt............... 28127_78_0_0_0_0_58 MATURE 136 11.74 78 14.05 58 9.62 24
...................................................AAGTATTGCACTTGTCCCGGCCTGA................ 19599_72_0_0_0_0_50 MATURE 122 10.54 72 12.97 50 8.29 25
.....................................................GTATTGCACTTGTCCCGaCCTGA................ 41193_33_0_0_0_0_83 MATURE 116 10.02 33 5.95 83 13.76 17A5
...................................................AAGTATTGCACTTGTCCCGaCCTGA................ 25608_49_0_0_0_0_30 MATURE 79 6.82 49 8.83 30 4.98 19A5
....................................................AGTATTGCACTTGTCCCGaCCTGA................ 41495_24_0_0_0_0_17 MATURE 41 3.54 24 4.32 17 2.82 18A5
....................................................AGTATTGCACTTGTCCCGGCCTGAa............... 12866_23_0_0_0_0_14 MATURE 37 3.20 23 4.14 14 2.32 24
....................................................AGTATTGCACTTGTCCCGGtCTGAt............... 28898_16_0_0_0_0_17 MATURE 33 2.85 16 2.88 17 2.82 19T4
....................................................AGTATTGCACTTGTCCCGGCCTGA................ 41440_13_0_0_0_0_12 MATURE 25 2.16 13 2.34 12 1.99 24
.....................................................GTATTGCACTTGTCCCGGCCTGAa............... 22083_9_0_0_0_0_13 MATURE 22 1.90 9 1.62 13 2.16 23
...................................................AAGTATTGCACTTGTCCCGcCCTGA................ 4915_13_0_0_0_0_6 MATURE 19 1.64 13 2.34 6 1.00 19C5
....................................................AGTATTGCACTTGTCCCGGCCTGc................ 42341_13_0_0_0_0_5 MATURE 18 1.55 13 2.34 5 0.83 23
.....................................................GTATTGCACTTGTCCCGcCCTGA................ 21630_4_0_0_0_0_13 MATURE 17 1.47 4 0.72 13 2.16 17C5
.....................................................GTATTGCACTTGTCCCGGaCTGA................ 24547_5_0_0_0_0_11 MATURE 16 1.38 5 0.90 11 1.82 18A4
.....................................................GTATTGCACTTGTCCCGtCCTGA................ 32972_8_0_0_0_0_8 MATURE 16 1.38 8 1.44 8 1.33 17T5
...................................................AAGTATTGCACTTGTCCCGGtCTGt................ 13181_6_0_0_0_0_9 MATURE 15 1.30 6 1.08 9 1.49 20T3
...................................................AAGTATTGCACTTGTCCCGtCCTGA................ 18075_12_0_0_0_0_3 MATURE 15 1.30 12 2.16 3 0.50 19T5
...................................................AAGTATTGCACTTGTCCCGGaCTGA................ 37177_7_0_0_0_0_7 MATURE 14 1.21 7 1.26 7 1.16 20A4
.....................................................GTATTGCACTTGTCCCGGCCTGA................ 37313_1_0_0_0_0_12 MATURE 13 1.12 1 0.18 12 1.99 23
...................................................AAGTATTGCACTTGTCCCGGtCTGA................ 2535_5_0_0_0_0_7 MATURE 12 1.04 5 0.90 7 1.16 20T4
....................................................AGTATTGCACTTGTCCCGGtCTGA................ 32871_6_0_0_0_0_6 MATURE 12 1.04 6 1.08 6 1.00 19T4
....................................................AGTATTGCACTTGTCCCGaCCTGc................ 38261_6_0_0_0_0_5 MATURE 11 0.95 6 1.08 5 0.83 18A4
...................................................AAGTATTGCACTTGTCCCGGCCTGc................ 19692_5_0_0_0_0_5 MATURE 10 0.86 5 0.90 5 0.83 24
...................................................AAGTATTGCACTTGTCCCGaCCTGc................ 14293_5_0_0_0_0_5 MATURE 10 0.86 5 0.90 5 0.83 19A4
....................................................AGTATTGCACTTGTCCCGGaCTGA................ 29764_3_0_0_0_0_6 MATURE 9 0.78 3 0.54 6 1.00 19A4
....................................................AGTATTGCACTTGTCCCGGaCTGAt............... 13047_3_0_0_0_0_5 MATURE 8 0.69 3 0.54 5 0.83 19A4
.....................................................GTgTTGCACTTGTCCCGGCCTGAa............... 12170_0_0_0_0_0_8 MATURE 8 0.69 0 0.00 8 1.33 2G20
....................................................AGTATTGCACTTGTCCCGGaCTGAa............... 39322_6_0_0_0_0_2 MATURE 8 0.69 6 1.08 2 0.33 19A4
.....................................................GTATTGCACTTGTgCCGGCCTGAt............... 7265_8_0_0_0_0_0 MATURE 8 0.69 8 1.44 0 0.00 13G9
....................................................AGTATTGCACTTGTCCCGtCCTGA................ 21559_4_0_0_0_0_4 MATURE 8 0.69 4 0.72 4 0.66 18T5
....................................................AGTATTGCACTTGTCCCGGCCTGAc............... 35373_4_0_0_0_0_2 MATURE 6 0.52 4 0.72 2 0.33 24
..................................................AAAGTATTGCACTTGTCCtGGCCT.................. 41185_1_0_0_0_0_4 MATURE 5 0.43 1 0.18 4 0.66 18T5
...................................................AAGTATTGCACTTGTCCCGGCCTGg................ 33952_4_0_0_0_0_1 MATURE 5 0.43 4 0.72 1 0.17 24
....................................................AGTATTGCACTTGTCCCGGtCTGAa............... 39834_1_0_0_0_0_3 MATURE 4 0.35 1 0.18 3 0.50 19T4
.....................................................GTgTTGCACTTGTCCCGGCCTGAt............... 13432_0_0_0_0_0_4 MATURE 4 0.35 0 0.00 4 0.66 2G20
.....................................................GTATTGCACTTGTCCCGGCCTGAc............... 16805_2_0_0_0_0_2 MATURE 4 0.35 2 0.36 2 0.33 23
...................................................AAGTATTGCACTTGTCCCGaCCTGg................ 27536_3_0_0_0_0_1 MATURE 4 0.35 3 0.54 1 0.17 19A4
...................................................AAGTATTGCACTTGTCCCGGaCTGt................ 25710_3_0_0_0_0_1 MATURE 4 0.35 3 0.54 1 0.17 20A3
....................................................AGTATTGCACTTGTCCCGGtCTGc................ 31420_3_0_0_0_0_1 MATURE 4 0.35 3 0.54 1 0.17 19T3
.....................................................GTAgTGCACTTGTCCCGGCCTGAGt.............. 12503_3_0_0_0_0_1 MATURE 4 0.35 3 0.54 1 0.17 3G20
...................................................AAGTATTGCACTTGTCCCGGgCTGt................ 17_3_0_0_0_0_0 MATURE 3 0.26 3 0.54 0 0.00 20G3
..................................................AAAGTATTGCACTTGTCCCGaCCT.................. 15221_0_0_0_0_0_3 MATURE 3 0.26 0 0.00 3 0.50 20A3
..................................................AAAGTATTGCACTTGTCCCGaCCTa................. 23373_2_0_0_0_0_1 MATURE 3 0.26 2 0.36 1 0.17 20A3
...................................................AAGTATTGCACTTGTCCCGtCCTGc................ 9199_3_0_0_0_0_0 MATURE 3 0.26 3 0.54 0 0.00 19T4
...................................................AAGTATTGCACTTGTCCCGGgCTGA................ 1250_2_0_0_0_0_1 MATURE 3 0.26 2 0.36 1 0.17 20G4
.....................................................GTATTGCACTTGTCCCGGCCTGAG............... 24824_1_0_0_0_0_1 MATURE 2 0.17 1 0.18 1 0.17 24
....................................................AGTgTTGCACTTGTCCCGGCCTGAt............... 19165_0_0_0_0_0_2 MATURE 2 0.17 0 0.00 2 0.33 3G20
.....................................................GTATTGCACTTGTCCCGGCCTGAGt.............. 10959_0_0_0_0_0_2 MATURE 2 0.17 0 0.00 2 0.33 24
..................................................AAAGTATTGCACTTGTCCCtGCCTt................. 30521_1_0_0_0_0_1 MATURE 2 0.17 1 0.18 1 0.17 19T4
......................................................TATTGCACTTGTCCCGGCCTGAt............... 17355_2_0_0_0_0_0 MATURE 2 0.17 2 0.36 0 0.00 22
....................................................AGTATTGCACTTGTCCCGGgCTGAa............... 32129_0_0_0_0_0_2 MATURE 2 0.17 0 0.00 2 0.33 19G4
.....................................................GTATTGCACTTGTCCCGGCCTGAGc.............. 1000_0_0_0_0_0_2 MATURE 2 0.17 0 0.00 2 0.33 24
....................................................AGTATTGCACTTGTCCCGGCCTGAG............... 29062_2_0_0_0_0_0 MATURE 2 0.17 2 0.36 0 0.00 25
..................................................AAAGTATTGCACTTGTCCCGGCCT.................. 14454_1_0_0_0_0_1 MATURE 2 0.17 1 0.18 1 0.17 24
.....................................................GTATTGCACTTGTCCCGaCCTGAt............... 18729_2_0_0_0_0_0 MATURE 2 0.17 2 0.36 0 0.00 17A5
..................................................AAAGTATTGCACTTGTCCCtGCCT.................. 30139_0_0_0_0_0_2 MATURE 2 0.17 0 0.00 2 0.33 19T4
..................................................AAAGTATTGCACTTGTCCCGGCCTG................. 28501_2_0_0_0_0_0 MATURE 2 0.17 2 0.36 0 0.00 25
....................................................AGTATTGCACTTGTCCCGaCCTGg................ 4067_2_0_0_0_0_0 MATURE 2 0.17 2 0.36 0 0.00 18A4
........................................................TTGCACTTGTCCCGGCCTGAGa.............. 18686_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 21
...................................................AAGTAaTGCACTTGTCCCGGCCTGA................ 27873_0_0_0_0_0_1 MATURE 1 0.09 0 0.00 1 0.17 5A19
..................................................AAAGTATTGCACTTGTCCCaGCCTG................. 23520_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 19A5
....................................................AGTATTGCACTTGTCCCGGgCTGAt............... 9285_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 19G4
.....................................................GTcTTGCACTTGTCCCGGCCTGAa............... 25644_0_0_0_0_0_1 MATURE 1 0.09 0 0.00 1 0.17 2C20
....................................................AGTATTGCACTTGTtCCGGCCTGA................ 30961_0_0_0_0_0_1 MATURE 1 0.09 0 0.00 1 0.17 14T9
....................................................AGTATTGCACTTGTCCCGGaCTGc................ 26719_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 19A3
....................................................AGTATTGCACTTGTCCCaGCCTa................. 29056_0_0_0_0_0_1 MATURE 1 0.09 0 0.00 1 0.17 17A4
..................................................AAAGTATTGCACTTGTCCCtGCCTG................. 28016_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 19T5
....................................................AGTATTGCACTTGTCCCGGaCTGAG............... 10944_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 19A5
.....................................................GTATTGCACTTGTCCCGGtCTGA................ 39843_0_0_0_0_0_1 MATURE 1 0.09 0 0.00 1 0.17 18T4
....................................................AGTATTGCACTTGTCCCGGCCTGg................ 2783_0_0_0_0_0_1 MATURE 1 0.09 0 0.00 1 0.17 23
....................................................AGTATTGCACTTGTCCCGGaCTGg................ 21601_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 19A3
....................................................AGTATTGCACTTGTgCCGGCCTGAt............... 37523_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 14G9
....................................................AGTATTGCAtTTGTCCCGGCCTGAt............... 37645_0_0_0_0_0_1 MATURE 1 0.09 0 0.00 1 0.17 9T14
....................................................AGTATTGCACTTGTCCCGcCCTGA................ 6405_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 18C5
..................................................AAAGTATTGCACTTGTCCCGaCCTG................. 26100_0_0_0_0_0_1 MATURE 1 0.09 0 0.00 1 0.17 20A4
..................................................AAAGTATTGCACTTGTCCCaGCCTt................. 2504_0_0_0_0_0_1 MATURE 1 0.09 0 0.00 1 0.17 19A4
..................................................AAAGTATTGCACTTGTCCCGGCCTa................. 8736_0_0_0_0_0_1 MATURE 1 0.09 0 0.00 1 0.17 24
.......................................................ATTGCACTTGTCCCGGCCTGAa............... 23137_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 21
....................................................AGTATTGCACTTGTCCCGGtCTGg................ 9576_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 19T3
..................................................AAAGTATTGCACTTGTCCCtGCCTa................. 9314_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 19T4
.....................................................GTATTGCACTTGTgCCGGCCTGAa............... 10814_1_0_0_0_0_0 MATURE 1 0.09 1 0.18 0 0.00 13G9
......................................................TATTGCACTTGTCCCGGaCTGA................ 11470_0_0_0_0_0_1 MATURE 1 0.09 0 0.00 1 0.17 17A4
---------- ---------- ----------
1158 555 603
(47.93) (52.07)
*** MATURESTAR ***
___________________________________________________________________________________________
TGCCCATTCATCCACAGGTGGGGATTGGTGGCATTACTTGTGTTAGATATAAAGTATTGCACTTGTCCCGGCCTGAGGAAGAAAGAGGGTT REF X 50095015 - 50095105
TATTGCACTTGTCCCGGCCTG MATURE X 50095070 - 50095180 mmu-miR-92a -
AGGTGGGGATTGGTGGCATTAC MATURESTAR X 50095031 - 50095142 mmu-miR-92a* -
___________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............AGGTGGGGATTGGTGGCATTACT...................................................... 20694_0_0_0_0_0_2 MATURESTAR 2 40.00 0 0 2 40.00 23
...............AGGTGGGGATTGGTGGCATcACT...................................................... 1441_0_0_0_0_0_1 MATURESTAR 1 20.00 0 0 1 20.00 19C3
...............AGGTGGGGATTGGTGGCATaACT...................................................... 318_0_0_0_0_0_1 MATURESTAR 1 20.00 0 0 1 20.00 19A3
...............AGGTGGGGATTGGTGGCgTTACT...................................................... 1314_0_0_0_0_0_1 MATURESTAR 1 20.00 0 0 1 20.00 17G5
---------- ---------- ----------
5 0 5
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 555 603 1158 99.57%
MATURESTAR 0 5 5 0.43%
---------- ---------- ----------
555 608 1163
[END]