[BEGIN]
REFERENCE HAIRPIN
***************************************************************************************************
ID : mmu-mir-875
DESCRIPTION : mmu-mir-875 MI0005551 Mus musculus miR-875 stem-loop
CHROMOSOME : 15
SPAN : 35590725 - 35590802
LENGTH : 78
SEQUENCE : TCTGTGGTACTATACCTCAGTTTTATCAGGTGTTCATTAAAATCACCTGAAAATACTGAGGCTATGTTTCACTGAGCA
OVERHANG THRESHOLD : 40%
***************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-875-3p
ACCID : MI0005551
PARENT : mmu-mir-875
CHROMOSOME : 15
START : 35590725
STOP : 35590802
OFFSET : 46..66
SEQUENCE : CCTGAAAATACTGAGGCTATG
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-875-5p
ACCID : MI0005551
PARENT : mmu-mir-875
CHROMOSOME : 15
START : 35590725
STOP : 35590802
OFFSET : 11..32
SEQUENCE : TATACCTCAGTTTTATCAGGTG
STRAND : -
******************************
*** MATURE-5P ***
______________________________________________________________________________
TCTGTGGTACTATACCTCAGTTTTATCAGGTGTTCATTAAAATCACCTGAAAATACTGAGGCTATGTTTCACTGAGCA REF 15 35590725 - 35590802
CCTGAAAATACTGAGGCTATG MATURE-3P 15 35590771 - 35590868 mmu-miR-875-3p -
TATACCTCAGTTTTATCAGGTG MATURE-5P 15 35590736 - 35590834 mmu-miR-875-5p -
______________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........TATACCTCAGTTTTATCAaGTGT.............................................. 6849_0_0_0_0_0_1 MATURE-5P 1 50.00 0 0 1 50.00 18A4
..........TATACCTCAGTTTTATCAGaTGT.............................................. 30862_0_0_0_0_0_1 MATURE-5P 1 50.00 0 0 1 50.00 19A3
---------- ---------- ----------
2 0 2
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-5P 0 2 2 100.00%
---------- ---------- ----------
0 2 2
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