[BEGIN]
REFERENCE HAIRPIN
*************************************************************************************************************
ID : mmu-mir-709
DESCRIPTION : mmu-mir-709 MI0004693 Mus musculus miR-709 stem-loop
CHROMOSOME : 8
SPAN : 86609998 - 86610085
LENGTH : 88
SEQUENCE : TGTCCCGTTTCTCTGCTTCTACTCAGAAGTGCTCTGAGCATAGAACTGTCCTGTTTGAGCAGCACTGGGGAGGCAGAGGCAGGAGGAT
OVERHANG THRESHOLD : 40%
*************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-709
ACCID : MI0004693
PARENT : mmu-mir-709
CHROMOSOME : 8
START : 86609998
STOP : 86610085
OFFSET : 69..87
SEQUENCE : GGAGGCAGAGGCAGGAGGA
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________________
TGTCCCGTTTCTCTGCTTCTACTCAGAAGTGCTCTGAGCATAGAACTGTCCTGTTTGAGCAGCACTGGGGAGGCAGAGGCAGGAGGAT REF 8 86609998 - 86610085
GGAGGCAGAGGCAGGAGGA MATURE 8 86610067 - 86610172 mmu-miR-709 +
________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..................................................................GGGGAGGCAGAGGCAGGAGGA.. 36307_1_0_0_0_0_7 MATURE 8 42.11 1 25.00 7 46.67 21
..................................................................GGGGAGGCAGAGGCAGGAGG... 44300_1_0_0_0_0_2 MATURE 3 15.79 1 25.00 2 13.33 20
....................................................................GGAGGCAGAGGCAGGAGGA.. 37129_0_0_0_0_0_2 MATURE 2 10.53 0 0.00 2 13.33 19
..................................................................GGGGAGGCAGAGGCAGGAGGt.. 33737_1_0_0_0_0_1 MATURE 2 10.53 1 25.00 1 6.67 20
...................................................................GGGAGGCAGAGGCAGGAGGAT. 37968_0_0_0_0_0_1 MATURE 1 5.26 0 0.00 1 6.67 21
..................................................................GGGGAGGCAGAGGCAGGAGt... 2524_0_0_0_0_0_1 MATURE 1 5.26 0 0.00 1 6.67 19
..................................................................GGGGAGGCAGAGGCAGGAG.... 5918_1_0_0_0_0_0 MATURE 1 5.26 1 25.00 0 0.00 19
..................................................................GGGGAGGCAGAGGCAGGAGGAT. 8083_0_0_0_0_0_1 MATURE 1 5.26 0 0.00 1 6.67 22
---------- ---------- ----------
19 4 15
(21.05) (78.95)
*** OTHER ***
________________________________________________________________________________________
TGTCCCGTTTCTCTGCTTCTACTCAGAAGTGCTCTGAGCATAGAACTGTCCTGTTTGAGCAGCACTGGGGAGGCAGAGGCAGGAGGAT REF 8 86609998 - 86610085
GGAGGCAGAGGCAGGAGGA MATURE 8 86610067 - 86610172 mmu-miR-709 +
________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............................................................AGCACTGGGGAGGCAGAGG.......... 34400_0_0_0_0_0_2 OTHER 2 100.00 0 0 2 100.00 19
---------- ---------- ----------
2 0 2
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 4 15 19 90.48%
OTHER 0 2 2 9.52%
---------- ---------- ----------
4 17 21
[END]