[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************************************
ID : mmu-mir-690
DESCRIPTION : mmu-mir-690 MI0004658 Mus musculus miR-690 stem-loop
CHROMOSOME : 16
SPAN : 28600021 - 28600129
LENGTH : 109
SEQUENCE : TGTGTTTTTGTGGAGCTAATTGGCTGTATTAAAGTGCTAGTAAGAAACATTCTCCTCCAGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAATATA
OVERHANG THRESHOLD : 40%
**********************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-690
ACCID : MI0004658
PARENT : mmu-mir-690
CHROMOSOME : 16
START : 28600021
STOP : 28600129
OFFSET : 83..104
SEQUENCE : AAAGGCTAGGCTCACAACCAAA
STRAND : -
******************************
*** MATURE ***
_____________________________________________________________________________________________________________
TGTGTTTTTGTGGAGCTAATTGGCTGTATTAAAGTGCTAGTAAGAAACATTCTCCTCCAGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAATATA REF 16 28600021 - 28600129
AAAGGCTAGGCTCACAACCAAA MATURE 16 28600104 - 28600233 mmu-miR-690 -
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................................................GTTAAAGGCTAGGCTCACAACCAA....... 20929_3_0_0_0_0_4 MATURE 7 31.82 3 33.33 4 30.77 24
................................................................................TTAAAGGCTAGGCTCACAACCAAAA..... 32392_2_0_0_0_0_2 MATURE 4 18.18 2 22.22 2 15.38 25
..............................................................................TGTTAAAGGCTAGGCTCACAACCAA....... 12145_1_0_0_0_0_1 MATURE 2 9.09 1 11.11 1 7.69 25
...............................................................................GTTAAAGGCTAGGCTCACAACCA........ 15522_1_0_0_0_0_1 MATURE 2 9.09 1 11.11 1 7.69 23
..................................................................................AAAGGCTAGGCTCACAACCAA....... 43534_0_0_0_0_0_2 MATURE 2 9.09 0 0.00 2 15.38 21
..................................................................................AAAGGCTAGGCTCACAACCAAAA..... 36475_1_0_0_0_0_0 MATURE 1 4.55 1 11.11 0 0.00 23
.....................................................................................GGCTAGGCTCACAACCAAAA..... 24940_0_0_0_0_0_1 MATURE 1 4.55 0 0.00 1 7.69 20
.................................................................................TAAAGGCTAGGCTCACAACC......... 15491_0_0_0_0_0_1 MATURE 1 4.55 0 0.00 1 7.69 20
.................................................................................TAAAGGCTAGGCTCACAACCAAAAT.... 32553_1_0_0_0_0_0 MATURE 1 4.55 1 11.11 0 0.00 25
...............................................................................GTTAAAGGCTAGGCTCACAACCAAA...... 43009_0_0_0_0_0_1 MATURE 1 4.55 0 0.00 1 7.69 25
---------- ---------- ----------
22 9 13
(40.91) (59.09)
*** OTHER ***
_____________________________________________________________________________________________________________
TGTGTTTTTGTGGAGCTAATTGGCTGTATTAAAGTGCTAGTAAGAAACATTCTCCTCCAGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAATATA REF 16 28600021 - 28600129
AAAGGCTAGGCTCACAACCAAA MATURE 16 28600104 - 28600233 mmu-miR-690 -
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........................................................GCTGGAGAGATGGCTCAGCT............................... 6833_0_0_0_0_0_1 OTHER 1 20.00 0 0 1 20.00 20
..........................................................AGCTGGAGAGATGGCTCAGC................................ 18817_0_0_0_0_0_1 OTHER 1 20.00 0 0 1 20.00 20
............................................................CTGGAGAGATGGCTCAGCTGTT............................ 20524_0_0_0_0_0_1 OTHER 1 20.00 0 0 1 20.00 22
...........................................................GCTGGAGAGATGGCTCAGC................................ 42154_0_0_0_0_0_1 OTHER 1 20.00 0 0 1 20.00 19
..............................................................GGAGAGATGGCTCAGCTGTTA........................... 26241_0_0_0_0_0_1 OTHER 1 20.00 0 0 1 20.00 21
---------- ---------- ----------
5 0 5
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 9 13 22 81.48%
OTHER 0 5 5 18.52%
---------- ---------- ----------
9 18 27
[END]