[BEGIN]

REFERENCE HAIRPIN
**********************************************************************************************************************************
ID                 : mmu-mir-689-2
DESCRIPTION        : mmu-mir-689-2 MI0004655 Mus musculus miR-689-2 stem-loop
CHROMOSOME         : 16
SPAN               : 11144133 - 11144241
LENGTH             : 109
SEQUENCE           : CCCGGATAGCCGGGTCCCCGTCCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCCCGCGGCGGCGCGGGGTCTCCCCCCGCCGGGCGTCGGGACCGGGGTCCGGTGCGG
OVERHANG THRESHOLD : 40%
**********************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-689
ACCID      : MI0004655
PARENT     : mmu-mir-689-2
CHROMOSOME : 16
START      : 11144133
STOP       : 11144241
OFFSET     : 23..43
SEQUENCE   : CGTCCCCGCTCGGCGGGGTCC
STRAND     : +
******************************



*** OTHER ***
_____________________________________________________________________________________________________________
CCCGGATAGCCGGGTCCCCGTCCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCCCGCGGCGGCGCGGGGTCTCCCCCCGCCGGGCGTCGGGACCGGGGTCCGGTGCGG REF                  16                   11144133 - 11144241  
                      CGTCCCCGCTCGGCGGGGTCC                                                                   MATURE               16                   11144156 - 11144284  mmu-miR-689          +                    
_____________________________________________________________________________________________________________

                                                                                                         -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
CCCGGATAGCCGGGTCCCCa..........................................................................................   35970_0_0_0_0_0_2        OTHER            2        28.57            0         0.00            2        66.67                        19   
CCCGGATAGCCGGGTCCCCGa.........................................................................................   16873_0_0_0_0_0_1        OTHER            1        14.29            0         0.00            1        33.33                        20   
.CCGGATAGCCGGGTCCCaGTCCa......................................................................................    1048_1_0_0_0_0_0        OTHER            1        14.29            1        25.00            0         0.00                      17A4   
.CCGGATAGCCGGGTCCCCaTC........................................................................................    5979_1_0_0_0_0_0        OTHER            1        14.29            1        25.00            0         0.00                      18A2   
..CGGATAGCCGGGTaCCCGTCCGTCC...................................................................................   42024_1_0_0_0_0_0        OTHER            1        14.29            1        25.00            0         0.00                     13A11   
.CCGGATAGCCGGGTCCCtGTC........................................................................................   35318_1_0_0_0_0_0        OTHER            1        14.29            1        25.00            0         0.00                      17T3   
                                                                                                                                                  ----------                ----------                ----------   
                                                                                                                                                           7                         4                         3                                          
                                                                                                                                                                               (57.14)                   (42.86)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
          OTHER               4               3               7         100.00%
                     ----------      ----------      ----------                
                              4               3               7                



[END]
