[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************************************
ID : mmu-mir-689-2
DESCRIPTION : mmu-mir-689-2 MI0004655 Mus musculus miR-689-2 stem-loop
CHROMOSOME : 16
SPAN : 11144133 - 11144241
LENGTH : 109
SEQUENCE : CCCGGATAGCCGGGTCCCCGTCCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCCCGCGGCGGCGCGGGGTCTCCCCCCGCCGGGCGTCGGGACCGGGGTCCGGTGCGG
OVERHANG THRESHOLD : 40%
**********************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-689
ACCID : MI0004655
PARENT : mmu-mir-689-2
CHROMOSOME : 16
START : 11144133
STOP : 11144241
OFFSET : 23..43
SEQUENCE : CGTCCCCGCTCGGCGGGGTCC
STRAND : +
******************************
*** OTHER ***
_____________________________________________________________________________________________________________
CCCGGATAGCCGGGTCCCCGTCCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCCCGCGGCGGCGCGGGGTCTCCCCCCGCCGGGCGTCGGGACCGGGGTCCGGTGCGG REF 16 11144133 - 11144241
CGTCCCCGCTCGGCGGGGTCC MATURE 16 11144156 - 11144284 mmu-miR-689 +
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
CCCGGATAGCCGGGTCCCCa.......................................................................................... 35970_0_0_0_0_0_2 OTHER 2 28.57 0 0.00 2 66.67 19
CCCGGATAGCCGGGTCCCCGa......................................................................................... 16873_0_0_0_0_0_1 OTHER 1 14.29 0 0.00 1 33.33 20
.CCGGATAGCCGGGTCCCaGTCCa...................................................................................... 1048_1_0_0_0_0_0 OTHER 1 14.29 1 25.00 0 0.00 17A4
.CCGGATAGCCGGGTCCCCaTC........................................................................................ 5979_1_0_0_0_0_0 OTHER 1 14.29 1 25.00 0 0.00 18A2
..CGGATAGCCGGGTaCCCGTCCGTCC................................................................................... 42024_1_0_0_0_0_0 OTHER 1 14.29 1 25.00 0 0.00 13A11
.CCGGATAGCCGGGTCCCtGTC........................................................................................ 35318_1_0_0_0_0_0 OTHER 1 14.29 1 25.00 0 0.00 17T3
---------- ---------- ----------
7 4 3
(57.14) (42.86)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
OTHER 4 3 7 100.00%
---------- ---------- ----------
4 3 7
[END]