[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-685
DESCRIPTION : mmu-mir-685 MI0004649 Mus musculus miR-685 stem-loop
CHROMOSOME : 14
SPAN : 51427159 - 51427267
LENGTH : 109
SEQUENCE : GTCGGGGCGGATGCCTCCCTCGCCGGAGCGGATGCCTCCCTCGCCGGAGCTTGGAACAGACTCACGGCCAGCAGTGCGAGTTCAATGGCTGAGGTGAGGCACCTCCCGG
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-685
ACCID : MI0004649
PARENT : mmu-mir-685
CHROMOSOME : 14
START : 51427159
STOP : 51427267
OFFSET : 82..102
SEQUENCE : TCAATGGCTGAGGTGAGGCAC
STRAND : -
******************************
*** MATURE ***
_____________________________________________________________________________________________________________
GTCGGGGCGGATGCCTCCCTCGCCGGAGCGGATGCCTCCCTCGCCGGAGCTTGGAACAGACTCACGGCCAGCAGTGCGAGTTCAATGGCTGAGGTGAGGCACCTCCCGG REF 14 51427159 - 51427267
TCAATGGCTGAGGTGAGGCAC MATURE 14 51427241 - 51427369 mmu-miR-685 -
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................................................GTTCAATGGCTGAGGTGAGaCACCT...... 13603_0_0_0_0_0_13 MATURE 13 32.50 0 0 13 32.50 19A5
...............................................................................GTTCAATGGCTGAGGTGAGGCACCT...... 7384_0_0_0_0_0_12 MATURE 12 30.00 0 0 12 30.00 25
................................................................................TTCAATGGCTGAGGTGAGGCACCTC..... 44021_0_0_0_0_0_3 MATURE 3 7.50 0 0 3 7.50 25
...............................................................................GTTCAATGGCTGAGGTGAGtCACCT...... 15665_0_0_0_0_0_3 MATURE 3 7.50 0 0 3 7.50 19T5
...............................................................................GTTCAATGGCTGAGGTGAGGC.......... 34570_0_0_0_0_0_1 MATURE 1 2.50 0 0 1 2.50 21
................................................................................TTCAATGGCTGAGGTGAGGaACCTC..... 32786_0_0_0_0_0_1 MATURE 1 2.50 0 0 1 2.50 19A5
..................................................................................CAATGGCTGAGGTGAGGCAtCTC..... 23269_0_0_0_0_0_1 MATURE 1 2.50 0 0 1 2.50 19T3
...............................................................................GTTCAATGGCTGAGGTGAGGtACCT...... 22006_0_0_0_0_0_1 MATURE 1 2.50 0 0 1 2.50 20T4
...............................................................................GTTCAATGGCTGAGGTGAG............ 42866_0_0_0_0_0_1 MATURE 1 2.50 0 0 1 2.50 19
.................................................................................TCAATGGCTGAGGTGAGGCACCTCa.... 6414_0_0_0_0_0_1 MATURE 1 2.50 0 0 1 2.50 24
.................................................................................TCAATGGCTGAGGTGAGGCACCcCC.... 27621_0_0_0_0_0_1 MATURE 1 2.50 0 0 1 2.50 22C2
.................................................................................TCAATGGCTGAGGTGAGGtACCTC..... 28380_0_0_0_0_0_1 MATURE 1 2.50 0 0 1 2.50 18T5
................................................................................TTCAATGGCTGAGGTGAGGCAtCTC..... 35691_0_0_0_0_0_1 MATURE 1 2.50 0 0 1 2.50 21T3
---------- ---------- ----------
40 0 40
(0.00) (100.00)
*** OTHER ***
_____________________________________________________________________________________________________________
GTCGGGGCGGATGCCTCCCTCGCCGGAGCGGATGCCTCCCTCGCCGGAGCTTGGAACAGACTCACGGCCAGCAGTGCGAGTTCAATGGCTGAGGTGAGGCACCTCCCGG REF 14 51427159 - 51427267
TCAATGGCTGAGGTGAGGCAC MATURE 14 51427241 - 51427369 mmu-miR-685 -
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........................GAGCGGATGCCTCCCTCGCtGGAGC............................................................ 23489_0_0_0_0_0_1 OTHER 1 100.00 0 0 1 100.00 19T5
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 0 40 40 97.56%
OTHER 0 1 1 2.44%
---------- ---------- ----------
0 41 41
[END]