[BEGIN]

REFERENCE HAIRPIN
***********************************************************************************************************************************
ID                 : mmu-mir-680-2
DESCRIPTION        : mmu-mir-680-2 MI0004641 Mus musculus miR-680-2 stem-loop
CHROMOSOME         : X
SPAN               : 140732333 - 140732442
LENGTH             : 110
SEQUENCE           : GGGCATCTGCTGACATGGGGGCCGAAGTCAGGCGCCAGGCATCGGGCACTCTGGATCTTATCTCTGGAACATTGATCCTCCTTGACAGCCTTGGGGGTCAGGCTGGGCTC
OVERHANG THRESHOLD : 40%
***********************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-680
ACCID      : MI0004641
PARENT     : mmu-mir-680-2
CHROMOSOME : X
START      : 140732333
STOP       : 140732442
OFFSET     : 1..21
SEQUENCE   : GGGCATCTGCTGACATGGGGG
STRAND     : +
******************************



*** OTHER ***
______________________________________________________________________________________________________________
GGGCATCTGCTGACATGGGGGCCGAAGTCAGGCGCCAGGCATCGGGCACTCTGGATCTTATCTCTGGAACATTGATCCTCCTTGACAGCCTTGGGGGTCAGGCTGGGCTC REF                  X                    140732333 - 140732442 
GGGCATCTGCTGACATGGGGG                                                                                          MATURE               X                    140732334 - 140732463 mmu-miR-680          +                    
______________________________________________________________________________________________________________

                                                                                                          -SEQ-                 -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.............................................GCACTCTGGATCTTATCTCTGGAAC.........................................       3758_0_0_0_0_0_2        OTHER            2        25.00            0            0            2        25.00                        25   
...............................................ACTCTGGATCTTATCTCTGG............................................      39319_0_0_0_0_0_1        OTHER            1        12.50            0            0            1        12.50                        20   
...............................................ACTCTGGATCTTATCTCTGt............................................      35039_0_0_0_0_0_1        OTHER            1        12.50            0            0            1        12.50                        19   
............................................GGCACTCTGGATCTTATCTCTGGA...........................................      39402_0_0_0_0_0_1        OTHER            1        12.50            0            0            1        12.50                        24   
...........................................GGGCACTCTGGATCTTATCTCTGt............................................      24486_0_0_0_0_0_1        OTHER            1        12.50            0            0            1        12.50                        23   
...............................................ACTCTGGATCTTATCTCTGGAAC.........................................       8441_0_0_0_0_0_1        OTHER            1        12.50            0            0            1        12.50                        23   
..............................................CACTCTGGATCTTATCTCTGGAAC.........................................       8497_0_0_0_0_0_1        OTHER            1        12.50            0            0            1        12.50                        24   
                                                                                                                                                      ----------                ----------                ----------   
                                                                                                                                                               8                         0                         8                                          
                                                                                                                                                                                    (0.00)                  (100.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
          OTHER               0               8               8         100.00%
                     ----------      ----------      ----------                
                              0               8               8                



[END]
