[BEGIN]
REFERENCE HAIRPIN
***********************************************************************************************************************************
ID : mmu-mir-680-2
DESCRIPTION : mmu-mir-680-2 MI0004641 Mus musculus miR-680-2 stem-loop
CHROMOSOME : X
SPAN : 140732333 - 140732442
LENGTH : 110
SEQUENCE : GGGCATCTGCTGACATGGGGGCCGAAGTCAGGCGCCAGGCATCGGGCACTCTGGATCTTATCTCTGGAACATTGATCCTCCTTGACAGCCTTGGGGGTCAGGCTGGGCTC
OVERHANG THRESHOLD : 40%
***********************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-680
ACCID : MI0004641
PARENT : mmu-mir-680-2
CHROMOSOME : X
START : 140732333
STOP : 140732442
OFFSET : 1..21
SEQUENCE : GGGCATCTGCTGACATGGGGG
STRAND : +
******************************
*** OTHER ***
______________________________________________________________________________________________________________
GGGCATCTGCTGACATGGGGGCCGAAGTCAGGCGCCAGGCATCGGGCACTCTGGATCTTATCTCTGGAACATTGATCCTCCTTGACAGCCTTGGGGGTCAGGCTGGGCTC REF X 140732333 - 140732442
GGGCATCTGCTGACATGGGGG MATURE X 140732334 - 140732463 mmu-miR-680 +
______________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............................................GCACTCTGGATCTTATCTCTGGAAC......................................... 3758_0_0_0_0_0_2 OTHER 2 25.00 0 0 2 25.00 25
...............................................ACTCTGGATCTTATCTCTGG............................................ 39319_0_0_0_0_0_1 OTHER 1 12.50 0 0 1 12.50 20
...............................................ACTCTGGATCTTATCTCTGt............................................ 35039_0_0_0_0_0_1 OTHER 1 12.50 0 0 1 12.50 19
............................................GGCACTCTGGATCTTATCTCTGGA........................................... 39402_0_0_0_0_0_1 OTHER 1 12.50 0 0 1 12.50 24
...........................................GGGCACTCTGGATCTTATCTCTGt............................................ 24486_0_0_0_0_0_1 OTHER 1 12.50 0 0 1 12.50 23
...............................................ACTCTGGATCTTATCTCTGGAAC......................................... 8441_0_0_0_0_0_1 OTHER 1 12.50 0 0 1 12.50 23
..............................................CACTCTGGATCTTATCTCTGGAAC......................................... 8497_0_0_0_0_0_1 OTHER 1 12.50 0 0 1 12.50 24
---------- ---------- ----------
8 0 8
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
OTHER 0 8 8 100.00%
---------- ---------- ----------
0 8 8
[END]