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REFERENCE HAIRPIN
*********************************************************************************************************************
ID                 : mmu-mir-669o
DESCRIPTION        : mmu-mir-669o MI0009945 Mus musculus miR-669o stem-loop
CHROMOSOME         : 2
SPAN               : 10435927 - 10436022
LENGTH             : 96
SEQUENCE           : TGCATGTGCATGTGTGTATAGTTGTGTGTGCATGTTTATGTGTGTATTTGAATATACATAACATACACACACACGTATAAACACAAGCACACACAC
OVERHANG THRESHOLD : 40%
*********************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-669o
ACCID      : MI0009945
PARENT     : mmu-mir-669o
CHROMOSOME : 2
START      : 10435927
STOP       : 10436022
OFFSET     : 19..41
SEQUENCE   : TAGTTGTGTGTGCATGTTTATGT
STRAND     : +
******************************



*** OTHER ***
________________________________________________________________________________________________
TGCATGTGCATGTGTGTATAGTTGTGTGTGCATGTTTATGTGTGTATTTGAATATACATAACATACACACACACGTATAAACACAAGCACACACAC REF                  2                    10435927 - 10436022  
                  TAGTTGTGTGTGCATGTTTATGT                                                        MATURE               2                    10435946 - 10436063  mmu-miR-669o         +                    
________________________________________________________________________________________________

                                                                                            -SEQ-               -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.......................................................ACATAACATACACACACACGTAT...................   38201_6_0_0_0_0_11        OTHER           17        47.22            6        33.33           11        61.11                        23   
.......................................................ACATAACATACACACACACGTAa...................    27805_5_0_0_0_0_3        OTHER            8        22.22            5        27.78            3        16.67                        22   
.....................................................ATgCATAACATACACACACACGTAT...................    33649_1_0_0_0_0_1        OTHER            2         5.56            1         5.56            1         5.56                      2G22   
.......................................................ACATAACATACACACACACGTATA..................     3986_2_0_0_0_0_0        OTHER            2         5.56            2        11.11            0         0.00                        24   
.......................................................ACATAACATACACACACcCGTAT...................    18835_0_0_0_0_0_1        OTHER            1         2.78            0         0.00            1         5.56                      17C5   
.......................................................ACATAACATACACACACACGTAc...................    13623_0_0_0_0_0_1        OTHER            1         2.78            0         0.00            1         5.56                        22   
.......................................................ACATAACATACACACACtCGTAa...................    33696_1_0_0_0_0_0        OTHER            1         2.78            1         5.56            0         0.00                      17T4   
.......................................................ACATAACATACACACACACGTATt..................    40937_1_0_0_0_0_0        OTHER            1         2.78            1         5.56            0         0.00                        23   
.......................................................ACATAACATACACACACcCGTAa...................    31291_1_0_0_0_0_0        OTHER            1         2.78            1         5.56            0         0.00                      17C4   
.......................................................ACATAACATACACACACACGTgTAA.................    26467_1_0_0_0_0_0        OTHER            1         2.78            1         5.56            0         0.00                      21G3   
..........................................................TAACATACACACACACGTAT...................    19628_0_0_0_0_0_1        OTHER            1         2.78            0         0.00            1         5.56                        20   
                                                                                                                                      ----------                ----------                ----------   
                                                                                                                                              36                        18                        18                                          
                                                                                                                                                                   (50.00)                   (50.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
          OTHER              18              18              36         100.00%
                     ----------      ----------      ----------                
                             18              18              36                



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