[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-669o
DESCRIPTION : mmu-mir-669o MI0009945 Mus musculus miR-669o stem-loop
CHROMOSOME : 2
SPAN : 10435927 - 10436022
LENGTH : 96
SEQUENCE : TGCATGTGCATGTGTGTATAGTTGTGTGTGCATGTTTATGTGTGTATTTGAATATACATAACATACACACACACGTATAAACACAAGCACACACAC
OVERHANG THRESHOLD : 40%
*********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-669o
ACCID : MI0009945
PARENT : mmu-mir-669o
CHROMOSOME : 2
START : 10435927
STOP : 10436022
OFFSET : 19..41
SEQUENCE : TAGTTGTGTGTGCATGTTTATGT
STRAND : +
******************************
*** OTHER ***
________________________________________________________________________________________________
TGCATGTGCATGTGTGTATAGTTGTGTGTGCATGTTTATGTGTGTATTTGAATATACATAACATACACACACACGTATAAACACAAGCACACACAC REF 2 10435927 - 10436022
TAGTTGTGTGTGCATGTTTATGT MATURE 2 10435946 - 10436063 mmu-miR-669o +
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......................................................ACATAACATACACACACACGTAT................... 38201_6_0_0_0_0_11 OTHER 17 47.22 6 33.33 11 61.11 23
.......................................................ACATAACATACACACACACGTAa................... 27805_5_0_0_0_0_3 OTHER 8 22.22 5 27.78 3 16.67 22
.....................................................ATgCATAACATACACACACACGTAT................... 33649_1_0_0_0_0_1 OTHER 2 5.56 1 5.56 1 5.56 2G22
.......................................................ACATAACATACACACACACGTATA.................. 3986_2_0_0_0_0_0 OTHER 2 5.56 2 11.11 0 0.00 24
.......................................................ACATAACATACACACACcCGTAT................... 18835_0_0_0_0_0_1 OTHER 1 2.78 0 0.00 1 5.56 17C5
.......................................................ACATAACATACACACACACGTAc................... 13623_0_0_0_0_0_1 OTHER 1 2.78 0 0.00 1 5.56 22
.......................................................ACATAACATACACACACtCGTAa................... 33696_1_0_0_0_0_0 OTHER 1 2.78 1 5.56 0 0.00 17T4
.......................................................ACATAACATACACACACACGTATt.................. 40937_1_0_0_0_0_0 OTHER 1 2.78 1 5.56 0 0.00 23
.......................................................ACATAACATACACACACcCGTAa................... 31291_1_0_0_0_0_0 OTHER 1 2.78 1 5.56 0 0.00 17C4
.......................................................ACATAACATACACACACACGTgTAA................. 26467_1_0_0_0_0_0 OTHER 1 2.78 1 5.56 0 0.00 21G3
..........................................................TAACATACACACACACGTAT................... 19628_0_0_0_0_0_1 OTHER 1 2.78 0 0.00 1 5.56 20
---------- ---------- ----------
36 18 18
(50.00) (50.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
OTHER 18 18 36 100.00%
---------- ---------- ----------
18 18 36
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