[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-669c
DESCRIPTION : mmu-mir-669c MI0004673 Mus musculus miR-669c stem-loop
CHROMOSOME : 2
SPAN : 10430923 - 10431031
LENGTH : 109
SEQUENCE : CCTCCATGTATGTGCATGTGTGTATAGTTGTGTGTGGATGTGTGTATTTGCATATAAATAACATACACACACACACACAAGTAAACACAAGTGCACAAACAGACACAGG
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-669c
ACCID : MI0004673
PARENT : mmu-mir-669c
CHROMOSOME : 2
START : 10430923
STOP : 10431031
OFFSET : 24..45
SEQUENCE : ATAGTTGTGTGTGGATGTGTGT
STRAND : +
******************************
*** MATURE ***
_____________________________________________________________________________________________________________
CCTCCATGTATGTGCATGTGTGTATAGTTGTGTGTGGATGTGTGTATTTGCATATAAATAACATACACACACACACACAAGTAAACACAAGTGCACAAACAGACACAGG REF 2 10430923 - 10431031
ATAGTTGTGTGTGGATGTGTGT MATURE 2 10430947 - 10431076 mmu-miR-669c +
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......................ATAGTTGTGTGTGGATGTGTGT................................................................. 14654_2_0_0_0_0_2 MATURE 4 57.14 2 50.00 2 66.67 22
.......................ATAGTTGTGTGTGGATGTGTGTAa............................................................... 29904_1_0_0_0_0_0 MATURE 1 14.29 1 25.00 0 0.00 23
.......................ATAGTTGTGTGTGGATGTGTGc................................................................. 22923_1_0_0_0_0_0 MATURE 1 14.29 1 25.00 0 0.00 21
.....................GTATAGTTGTGTGTGGATGTcTGTc................................................................ 11944_0_0_0_0_0_1 MATURE 1 14.29 0 0.00 1 33.33 20C3
---------- ---------- ----------
7 4 3
(57.14) (42.86)
*** OTHER ***
_____________________________________________________________________________________________________________
CCTCCATGTATGTGCATGTGTGTATAGTTGTGTGTGGATGTGTGTATTTGCATATAAATAACATACACACACACACACAAGTAAACACAAGTGCACAAACAGACACAGG REF 2 10430923 - 10431031
ATAGTTGTGTGTGGATGTGTGT MATURE 2 10430947 - 10431076 mmu-miR-669c +
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........................................................AACATACACACACACACAC................................ 38026_1_0_0_0_0_3 OTHER 4 57.14 1 100.00 3 50.00 19
.........................................................ATAACATACACACACACAC.................................. 19978_0_0_0_0_0_1 OTHER 1 14.29 0 0.00 1 16.67 19
............................................................ACATACACACACACACACAA.............................. 17568_0_0_0_0_0_1 OTHER 1 14.29 0 0.00 1 16.67 20
...........................................................AACATACACACACACACACA............................... 10931_0_0_0_0_0_1 OTHER 1 14.29 0 0.00 1 16.67 20
---------- ---------- ----------
7 1 6
(14.29) (85.71)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 4 3 7 50.00%
OTHER 1 6 7 50.00%
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5 9 14
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