[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-598
DESCRIPTION : mmu-mir-598 MI0005556 Mus musculus miR-598 stem-loop
CHROMOSOME : 14
SPAN : 64346026 - 64346104
LENGTH : 79
SEQUENCE : GCTGATGCTGGCGGTGATGCCGATGGTGCGAGCTGAAAATGGGCTGCTACGTCATCGTCGTCATCGTTATCATCATCAT
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-598
ACCID : MI0005556
PARENT : mmu-mir-598
CHROMOSOME : 14
START : 64346026
STOP : 64346104
OFFSET : 48..69
SEQUENCE : TACGTCATCGTCGTCATCGTTA
STRAND : +
******************************
*** MATURE ***
_______________________________________________________________________________
GCTGATGCTGGCGGTGATGCCGATGGTGCGAGCTGAAAATGGGCTGCTACGTCATCGTCGTCATCGTTATCATCATCAT REF 14 64346026 - 64346104
TACGTCATCGTCGTCATCGTTA MATURE 14 64346074 - 64346173 mmu-miR-598 +
_______________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................TACGTCATCGTCGTCATCGTTAT.......... 40986_9_0_0_0_0_7 MATURE 16 59.26 9 64.29 7 53.85 23
...............................................TACGTCATCGTCGTCATCGTT............ 15381_0_0_0_0_0_3 MATURE 3 11.11 0 0.00 3 23.08 21
...............................................TACGTCATCGTCGTCATCGgTAT.......... 40653_2_0_0_0_0_0 MATURE 2 7.41 2 14.29 0 0.00 19G3
...............................................TACGTCATCGTCGTCATCGTaAT.......... 9607_0_0_0_0_0_2 MATURE 2 7.41 0 0.00 2 15.38 20A2
...............................................TACGTCATCGTCGTCATCGcTAT.......... 41523_0_0_0_0_0_1 MATURE 1 3.70 0 0.00 1 7.69 19C3
...............................................TACGTCATCGTCGTCATCGTTA........... 6947_1_0_0_0_0_0 MATURE 1 3.70 1 7.14 0 0.00 22
...............................................TACGTCATCGTCGTCATCcTTA........... 2990_1_0_0_0_0_0 MATURE 1 3.70 1 7.14 0 0.00 18C3
...............................................TACGTCATCGTCGTCATCcTTAT.......... 40833_1_0_0_0_0_0 MATURE 1 3.70 1 7.14 0 0.00 18C4
---------- ---------- ----------
27 14 13
(51.85) (48.15)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 14 13 27 100.00%
---------- ---------- ----------
14 13 27
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