[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-504
DESCRIPTION : mmu-mir-504 MI0005515 Mus musculus miR-504 stem-loop
CHROMOSOME : X
SPAN : 56350835 - 56350913
LENGTH : 79
SEQUENCE : TCCTGTTGGGAGACCCTGGTCTGCACTCTATCTGTAAACTTACTGAAGGGAGAGCAGGGCAGGGTTTCCCATACAGAGG
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-504
ACCID : MI0005515
PARENT : mmu-mir-504
CHROMOSOME : X
START : 56350835
STOP : 56350913
OFFSET : 11..32
SEQUENCE : AGACCCTGGTCTGCACTCTATC
STRAND : -
******************************
*** MATURE ***
_______________________________________________________________________________
TCCTGTTGGGAGACCCTGGTCTGCACTCTATCTGTAAACTTACTGAAGGGAGAGCAGGGCAGGGTTTCCCATACAGAGG REF X 56350835 - 56350913
AGACCCTGGTCTGCACTCTATC MATURE X 56350846 - 56350945 mmu-miR-504 -
_______________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........GACCCTGGTCTGCACTCTAT................................................. 19414_2_0_0_0_0_4 MATURE 6 42.86 2 33.33 4 50.00 20
.........GAGACCCTGGTCTGCACTCTAT................................................. 24893_1_0_0_0_0_1 MATURE 2 14.29 1 16.67 1 12.50 22
........GGAGACCCTGGTCTGCACTCTATCT............................................... 24763_1_0_0_0_0_0 MATURE 1 7.14 1 16.67 0 0.00 25
.........GAGACCCTGGTCTGCACTCT................................................... 10215_1_0_0_0_0_0 MATURE 1 7.14 1 16.67 0 0.00 20
...........GACCCTGGTCTGCACTCTATCTa.............................................. 26114_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 12.50 22
..........AGACCCTGGTCTGCACTCTATCT............................................... 29892_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 12.50 23
...........GACCCTGGTCTGCACTCTAcCT............................................... 25675_1_0_0_0_0_0 MATURE 1 7.14 1 16.67 0 0.00 19C2
.........GAGACCCTGGTCTGCACTCTATCT............................................... 757_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 12.50 24
---------- ---------- ----------
14 6 8
(42.86) (57.14)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 6 8 14 100.00%
---------- ---------- ----------
6 8 14
[END]