[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-497
DESCRIPTION : mmu-mir-497 MI0004636 Mus musculus miR-497 stem-loop
CHROMOSOME : 11
SPAN : 70048219 - 70048302
LENGTH : 84
SEQUENCE : CCTGCCCCCGCCCCAGCAGCACACTGTGGTTTGTACGGCACTGTGGCCACGTCCAAACCACACTGTGGTGTTAGAGCGAGGGTA
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-497
ACCID : MI0004636
PARENT : mmu-mir-497
CHROMOSOME : 11
START : 70048219
STOP : 70048302
OFFSET : 14..35
SEQUENCE : CAGCAGCACACTGTGGTTTGTA
STRAND : +
******************************
*** MATURE ***
____________________________________________________________________________________
CCTGCCCCCGCCCCAGCAGCACACTGTGGTTTGTACGGCACTGTGGCCACGTCCAAACCACACTGTGGTGTTAGAGCGAGGGTA REF 11 70048219 - 70048302
CAGCAGCACACTGTGGTTTGTA MATURE 11 70048233 - 70048337 mmu-miR-497 +
____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............CAGCAGCACACTGTGGTTTGT................................................... 34509_2_0_0_0_0_4 MATURE 6 46.15 2 28.57 4 66.67 21
.............CAGCAGCACACTGTGGTTTGTAt................................................. 24756_1_0_0_0_0_0 MATURE 1 7.69 1 14.29 0 0.00 22
..............AGCAGCACACTGTGGTaTGTAC................................................. 10391_1_0_0_0_0_0 MATURE 1 7.69 1 14.29 0 0.00 16A5
...........CCgAGCAGCACACTGTGGTTTGTAC................................................. 16932_1_0_0_0_0_0 MATURE 1 7.69 1 14.29 0 0.00 2G22
...........CCgAGCAGCACACTGTGGTTTGTAt................................................. 13044_1_0_0_0_0_0 MATURE 1 7.69 1 14.29 0 0.00 2G21
.............CAGCAGCACACTGTGGTaTGTA.................................................. 6576_1_0_0_0_0_0 MATURE 1 7.69 1 14.29 0 0.00 17A4
.............CAGCAGCACACTGTGGTcTGTAC................................................. 20970_0_0_0_0_0_1 MATURE 1 7.69 0 0.00 1 16.67 17C5
..........CCaCAGCAGCACACTGTGGTTTGTA.................................................. 38853_0_0_0_0_0_1 MATURE 1 7.69 0 0.00 1 16.67 2A22
---------- ---------- ----------
13 7 6
(53.85) (46.15)
*** OTHER ***
____________________________________________________________________________________
CCTGCCCCCGCCCCAGCAGCACACTGTGGTTTGTACGGCACTGTGGCCACGTCCAAACCACACTGTGGTGTTAGAGCGAGGGTA REF 11 70048219 - 70048302
CAGCAGCACACTGTGGTTTGTA MATURE 11 70048233 - 70048337 mmu-miR-497 +
____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....................................................CAAACCACACTGTGGTGTTAa........... 20442_1_0_0_0_0_0 OTHER 1 16.67 1 20.00 0 0.00 20
.................................................CGgCCAAACCACACTGTGGTGTTAG........... 11692_0_0_0_0_0_1 OTHER 1 16.67 0 0.00 1 100.00 2G22
.................................................CGgCCAAACCACACTGTGGTGTTAt........... 16314_1_0_0_0_0_0 OTHER 1 16.67 1 20.00 0 0.00 2G21
...................................................TCCAAACCACACTGTGGTGTTAG........... 41967_1_0_0_0_0_0 OTHER 1 16.67 1 20.00 0 0.00 23
..................................................GTCCAAACCACACTGTGGTGTTAG........... 22065_1_0_0_0_0_0 OTHER 1 16.67 1 20.00 0 0.00 24
.....................................................CAAACCACACTGTGGTaTTAG........... 14574_1_0_0_0_0_0 OTHER 1 16.67 1 20.00 0 0.00 16A4
---------- ---------- ----------
6 5 1
(83.33) (16.67)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 7 6 13 68.42%
OTHER 5 1 6 31.58%
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12 7 19
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