[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-467d
DESCRIPTION : mmu-mir-467d MI0005513 Mus musculus miR-467d stem-loop
CHROMOSOME : 2
SPAN : 10429257 - 10429341
LENGTH : 85
SEQUENCE : CCTGTGTGCATAAGTGCGCGCATGTATATGCGTGTATATTTTATGCATATACATACACACACCTACACACACATGCACACAGACA
OVERHANG THRESHOLD : 40%
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TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-467d
ACCID : MI0005513
PARENT : mmu-mir-467d
CHROMOSOME : 2
START : 10429257
STOP : 10429341
OFFSET : 11..32
SEQUENCE : TAAGTGCGCGCATGTATATGCG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-467d*
ACCID : MI0005513
PARENT : mmu-mir-467d
CHROMOSOME : 2
START : 10429257
STOP : 10429341
OFFSET : 47..68
SEQUENCE : ATATACATACACACACCTACAC
STRAND : +
******************************
*** MATURE ***
_____________________________________________________________________________________
CCTGTGTGCATAAGTGCGCGCATGTATATGCGTGTATATTTTATGCATATACATACACACACCTACACACACATGCACACAGACA REF 2 10429257 - 10429341
TAAGTGCGCGCATGTATATGCG MATURE 2 10429268 - 10429373 mmu-miR-467d +
ATATACATACACACACCTACAC MATURESTAR 2 10429304 - 10429409 mmu-miR-467d* +
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........ATAAGTGCGCGCATGTATATGC....................................................... 38237_1_0_0_0_0_0 MATURE 1 100.00 1 100.00 0 0 22
---------- ---------- ----------
1 1 0
(100.00) (0.00)
*** MATURESTAR ***
_____________________________________________________________________________________
CCTGTGTGCATAAGTGCGCGCATGTATATGCGTGTATATTTTATGCATATACATACACACACCTACACACACATGCACACAGACA REF 2 10429257 - 10429341
TAAGTGCGCGCATGTATATGCG MATURE 2 10429268 - 10429373 mmu-miR-467d +
ATATACATACACACACCTACAC MATURESTAR 2 10429304 - 10429409 mmu-miR-467d* +
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............................................GCtTATACATACACACACCTACA................... 12552_2_0_0_0_0_0 MATURESTAR 2 28.57 2 50.00 0 0.00 2T20
..............................................ATATACATACACACACCTACA................... 33321_0_0_0_0_0_2 MATURESTAR 2 28.57 0 0.00 2 66.67 21
..............................................ATATACATACACACACCTACAC.................. 42447_2_0_0_0_0_0 MATURESTAR 2 28.57 2 50.00 0 0.00 22
...............................................TATACATACACACACCTACA................... 7860_0_0_0_0_0_1 MATURESTAR 1 14.29 0 0.00 1 33.33 20
---------- ---------- ----------
7 4 3
(57.14) (42.86)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1 0 1 12.50%
MATURESTAR 4 3 7 87.50%
---------- ---------- ----------
5 3 8
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