[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************
ID : mmu-mir-467b
DESCRIPTION : mmu-mir-467b MI0004671 Mus musculus miR-467b stem-loop
CHROMOSOME : 2
SPAN : 10402875 - 10402947
LENGTH : 73
SEQUENCE : CCGTGTGCGTAAGTGCCTGCATGTATATGCGTGTATATTTTATGCATATACATACACACACCAACACACACAT
OVERHANG THRESHOLD : 40%
**********************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-467b
ACCID : MI0004671
PARENT : mmu-mir-467b
CHROMOSOME : 2
START : 10402875
STOP : 10402947
OFFSET : 9..29
SEQUENCE : GTAAGTGCCTGCATGTATATG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-467b*
ACCID : MI0004671
PARENT : mmu-mir-467b
CHROMOSOME : 2
START : 10402875
STOP : 10402947
OFFSET : 46..67
SEQUENCE : ATATACATACACACACCAACAC
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________________
CCGTGTGCGTAAGTGCCTGCATGTATATGCGTGTATATTTTATGCATATACATACACACACCAACACACACAT REF 2 10402875 - 10402947
GTAAGTGCCTGCATGTATATG MATURE 2 10402884 - 10402976 mmu-miR-467b +
ATATACATACACACACCAACAC MATURESTAR 2 10402921 - 10403014 mmu-miR-467b* +
_________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........GTAAGTGCCTGCATGTATATGCGg.......................................... 17776_0_0_0_0_0_3 MATURE 3 25.00 0 0.00 3 33.33 23
........GTAAGTGCCTGCATGTATATGCGa.......................................... 5644_0_0_0_0_0_2 MATURE 2 16.67 0 0.00 2 22.22 23
........GTAAGTGCCTGCATGTATATcCGT.......................................... 33738_0_0_0_0_0_1 MATURE 1 8.33 0 0.00 1 11.11 20C3
........GTAAGTGCCTGCATGTATAgGCGa.......................................... 19135_1_0_0_0_0_0 MATURE 1 8.33 1 33.33 0 0.00 19G3
........GTAAGTGCCTGCATGTATATGCGTG......................................... 12650_0_0_0_0_0_1 MATURE 1 8.33 0 0.00 1 11.11 25
......GCGTAAGTGCCTGCATGTATAT.............................................. 26752_0_0_0_0_0_1 MATURE 1 8.33 0 0.00 1 11.11 22
........GTAAGTGCCTGCATGTATAaGCGa.......................................... 7086_1_0_0_0_0_0 MATURE 1 8.33 1 33.33 0 0.00 19A3
........GTAAGTGCCTGCATGTATATGCGT.......................................... 3102_0_0_0_0_0_1 MATURE 1 8.33 0 0.00 1 11.11 24
......GCGTAAGTGCCTGCATGTATATGa............................................ 29021_1_0_0_0_0_0 MATURE 1 8.33 1 33.33 0 0.00 23
---------- ---------- ----------
12 3 9
(25.00) (75.00)
*** MATURESTAR ***
_________________________________________________________________________
CCGTGTGCGTAAGTGCCTGCATGTATATGCGTGTATATTTTATGCATATACATACACACACCAACACACACAT REF 2 10402875 - 10402947
GTAAGTGCCTGCATGTATATG MATURE 2 10402884 - 10402976 mmu-miR-467b +
ATATACATACACACACCAACAC MATURESTAR 2 10402921 - 10403014 mmu-miR-467b* +
_________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............................................ATATACATACACACACCAACA........ 20304_1_0_0_0_0_0 MATURESTAR 1 33.33 1 33.33 0 0 21
..............................................TATACATACACACACCAACAC....... 3823_1_0_0_0_0_0 MATURESTAR 1 33.33 1 33.33 0 0 21
.............................................ATATACATACACACACCAACAC....... 38319_1_0_0_0_0_0 MATURESTAR 1 33.33 1 33.33 0 0 22
---------- ---------- ----------
3 3 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 3 9 12 80.00%
MATURESTAR 3 0 3 20.00%
---------- ---------- ----------
6 9 15
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