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REFERENCE HAIRPIN
***********************************************************************************************************************************************
ID                 : mmu-mir-466k
DESCRIPTION        : mmu-mir-466k MI0006292 Mus musculus miR-466k stem-loop
CHROMOSOME         : 3
SPAN               : 85271299 - 85271420
LENGTH             : 122
SEQUENCE           : ATATATGTGTGTGTGTGTGTGTGTGTGTACATGTACATGTGAGTATGTGTGTGTATATGTTTGTACATGTGCATGTGTGTGAGTATGTGAATATATGTGTATATGTGTGCATGTGCATGTGT
OVERHANG THRESHOLD : 40%
***********************************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-466k
ACCID      : MI0006292
PARENT     : mmu-mir-466k
CHROMOSOME : 3
START      : 85271299
STOP       : 85271420
OFFSET     : 20..42
SEQUENCE   : TGTGTGTGTACATGTACATGTGA
STRAND     : +
******************************



*** OTHER ***
__________________________________________________________________________________________________________________________
ATATATGTGTGTGTGTGTGTGTGTGTGTACATGTACATGTGAGTATGTGTGTGTATATGTTTGTACATGTGCATGTGTGTGAGTATGTGAATATATGTGTATATGTGTGCATGTGCATGTGT REF                  3                    85271299 - 85271420  
                   TGTGTGTGTACATGTACATGTGA                                                                                 MATURE               3                    85271319 - 85271462  mmu-miR-466k         +                    
__________________________________________________________________________________________________________________________

                                                                                                                      -SEQ-                  -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.....TGTGTGTGTGTGTGTGTGTGTGTAC.............................................................................................   16092_206_0_0_0_0_256        OTHER          462        59.08          206        81.75          256        48.30                        25   
.....TGTGTGTGTGTGTGTGTGTGTGT...............................................................................................    34104_42_0_0_0_0_200        OTHER          242        30.95           42        16.67          200        37.74                        23   
......GTGTGTGTGTGTGTGTGTGTGTACA............................................................................................      13759_2_0_0_0_0_16        OTHER           18         2.30            2         0.79           16         3.02                        25   
.....TGTGTGTGTGTGTGTGTGTGTGTA..............................................................................................      30939_0_0_0_0_0_11        OTHER           11         1.41            0         0.00           11         2.08                        24   
....ATGTGTGTGTGTGTGTGTGTGTGT...............................................................................................       18899_0_0_0_0_0_9        OTHER            9         1.15            0         0.00            9         1.70                        24   
......GTGTGTGTGTGTGTGTGTGTGTAC.............................................................................................       39483_1_0_0_0_0_6        OTHER            7         0.90            1         0.40            6         1.13                        24   
......GTGTGTGTGTGTGTGTGTGTGT...............................................................................................       33197_0_0_0_0_0_5        OTHER            5         0.64            0         0.00            5         0.94                        22   
....ATGTGTGTGTGTGTGTGTGTGT.................................................................................................       39708_0_0_0_0_0_4        OTHER            4         0.51            0         0.00            4         0.75                        22   
.......TGTGTGTGTGTGTGTGTGTGTACAT...........................................................................................       37544_1_0_0_0_0_2        OTHER            3         0.38            1         0.40            2         0.38                        25   
......GTGTGTGTGTGTGTGTGTGTG................................................................................................       29410_0_0_0_0_0_3        OTHER            3         0.38            0         0.00            3         0.57                        21   
....ATGTGTGTGTGTGTGTGTG....................................................................................................       23366_0_0_0_0_0_2        OTHER            2         0.26            0         0.00            2         0.38                        19   
.......TGTGTGTGTGTGTGTGTGTGT...............................................................................................         494_0_0_0_0_0_2        OTHER            2         0.26            0         0.00            2         0.38                        21   
....ATGTGTGTGTGTGTGTGTGT...................................................................................................       20576_0_0_0_0_0_2        OTHER            2         0.26            0         0.00            2         0.38                        20   
......GTGTGTGTGTGTGTGTGTGTGTA..............................................................................................        1432_0_0_0_0_0_2        OTHER            2         0.26            0         0.00            2         0.38                        23   
........GTGTGTGTGTGTGTGTGTGT...............................................................................................       36981_0_0_0_0_0_2        OTHER            2         0.26            0         0.00            2         0.38                        20   
.......TGTGTGTGTGTGTGTGTGTGTAC.............................................................................................        1353_0_0_0_0_0_2        OTHER            2         0.26            0         0.00            2         0.38                        23   
.....TGTGTGTGTGTGTGTGTGTGTG................................................................................................       34505_0_0_0_0_0_1        OTHER            1         0.13            0         0.00            1         0.19                        22   
.........TGTGTGTGTGTGTGTGTGTA..............................................................................................       35596_0_0_0_0_0_1        OTHER            1         0.13            0         0.00            1         0.19                        20   
...TATGTGTGTGTGTGTGTGTGTGTGT...............................................................................................       34075_0_0_0_0_0_1        OTHER            1         0.13            0         0.00            1         0.19                        25   
.........TGTGTGTGTGTGTGTGTGTAC.............................................................................................       32888_0_0_0_0_0_1        OTHER            1         0.13            0         0.00            1         0.19                        21   
.......TGTGTGTGTGTGTGTGTGTGTA..............................................................................................       28940_0_0_0_0_0_1        OTHER            1         0.13            0         0.00            1         0.19                        22   
.........TGTGTGTGTGTGTGTGTGT...............................................................................................       31264_0_0_0_0_0_1        OTHER            1         0.13            0         0.00            1         0.19                        19   
                                                                                                                                                                   ----------                ----------                ----------   
                                                                                                                                                                          782                       252                       530                                          
                                                                                                                                                                                                (32.23)                   (67.77)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
          OTHER             252             530             782         100.00%
                     ----------      ----------      ----------                
                            252             530             782                



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