[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-466k
DESCRIPTION : mmu-mir-466k MI0006292 Mus musculus miR-466k stem-loop
CHROMOSOME : 3
SPAN : 85271299 - 85271420
LENGTH : 122
SEQUENCE : ATATATGTGTGTGTGTGTGTGTGTGTGTACATGTACATGTGAGTATGTGTGTGTATATGTTTGTACATGTGCATGTGTGTGAGTATGTGAATATATGTGTATATGTGTGCATGTGCATGTGT
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-466k
ACCID : MI0006292
PARENT : mmu-mir-466k
CHROMOSOME : 3
START : 85271299
STOP : 85271420
OFFSET : 20..42
SEQUENCE : TGTGTGTGTACATGTACATGTGA
STRAND : +
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*** OTHER ***
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ATATATGTGTGTGTGTGTGTGTGTGTGTACATGTACATGTGAGTATGTGTGTGTATATGTTTGTACATGTGCATGTGTGTGAGTATGTGAATATATGTGTATATGTGTGCATGTGCATGTGT REF 3 85271299 - 85271420
TGTGTGTGTACATGTACATGTGA MATURE 3 85271319 - 85271462 mmu-miR-466k +
__________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....TGTGTGTGTGTGTGTGTGTGTGTAC............................................................................................. 16092_206_0_0_0_0_256 OTHER 462 59.08 206 81.75 256 48.30 25
.....TGTGTGTGTGTGTGTGTGTGTGT............................................................................................... 34104_42_0_0_0_0_200 OTHER 242 30.95 42 16.67 200 37.74 23
......GTGTGTGTGTGTGTGTGTGTGTACA............................................................................................ 13759_2_0_0_0_0_16 OTHER 18 2.30 2 0.79 16 3.02 25
.....TGTGTGTGTGTGTGTGTGTGTGTA.............................................................................................. 30939_0_0_0_0_0_11 OTHER 11 1.41 0 0.00 11 2.08 24
....ATGTGTGTGTGTGTGTGTGTGTGT............................................................................................... 18899_0_0_0_0_0_9 OTHER 9 1.15 0 0.00 9 1.70 24
......GTGTGTGTGTGTGTGTGTGTGTAC............................................................................................. 39483_1_0_0_0_0_6 OTHER 7 0.90 1 0.40 6 1.13 24
......GTGTGTGTGTGTGTGTGTGTGT............................................................................................... 33197_0_0_0_0_0_5 OTHER 5 0.64 0 0.00 5 0.94 22
....ATGTGTGTGTGTGTGTGTGTGT................................................................................................. 39708_0_0_0_0_0_4 OTHER 4 0.51 0 0.00 4 0.75 22
.......TGTGTGTGTGTGTGTGTGTGTACAT........................................................................................... 37544_1_0_0_0_0_2 OTHER 3 0.38 1 0.40 2 0.38 25
......GTGTGTGTGTGTGTGTGTGTG................................................................................................ 29410_0_0_0_0_0_3 OTHER 3 0.38 0 0.00 3 0.57 21
....ATGTGTGTGTGTGTGTGTG.................................................................................................... 23366_0_0_0_0_0_2 OTHER 2 0.26 0 0.00 2 0.38 19
.......TGTGTGTGTGTGTGTGTGTGT............................................................................................... 494_0_0_0_0_0_2 OTHER 2 0.26 0 0.00 2 0.38 21
....ATGTGTGTGTGTGTGTGTGT................................................................................................... 20576_0_0_0_0_0_2 OTHER 2 0.26 0 0.00 2 0.38 20
......GTGTGTGTGTGTGTGTGTGTGTA.............................................................................................. 1432_0_0_0_0_0_2 OTHER 2 0.26 0 0.00 2 0.38 23
........GTGTGTGTGTGTGTGTGTGT............................................................................................... 36981_0_0_0_0_0_2 OTHER 2 0.26 0 0.00 2 0.38 20
.......TGTGTGTGTGTGTGTGTGTGTAC............................................................................................. 1353_0_0_0_0_0_2 OTHER 2 0.26 0 0.00 2 0.38 23
.....TGTGTGTGTGTGTGTGTGTGTG................................................................................................ 34505_0_0_0_0_0_1 OTHER 1 0.13 0 0.00 1 0.19 22
.........TGTGTGTGTGTGTGTGTGTA.............................................................................................. 35596_0_0_0_0_0_1 OTHER 1 0.13 0 0.00 1 0.19 20
...TATGTGTGTGTGTGTGTGTGTGTGT............................................................................................... 34075_0_0_0_0_0_1 OTHER 1 0.13 0 0.00 1 0.19 25
.........TGTGTGTGTGTGTGTGTGTAC............................................................................................. 32888_0_0_0_0_0_1 OTHER 1 0.13 0 0.00 1 0.19 21
.......TGTGTGTGTGTGTGTGTGTGTA.............................................................................................. 28940_0_0_0_0_0_1 OTHER 1 0.13 0 0.00 1 0.19 22
.........TGTGTGTGTGTGTGTGTGT............................................................................................... 31264_0_0_0_0_0_1 OTHER 1 0.13 0 0.00 1 0.19 19
---------- ---------- ----------
782 252 530
(32.23) (67.77)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
OTHER 252 530 782 100.00%
---------- ---------- ----------
252 530 782
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