[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************************************
ID : mmu-mir-466f-2
DESCRIPTION : mmu-mir-466f-2 MI0005508 Mus musculus miR-466f-2 stem-loop
CHROMOSOME : 2
SPAN : 10390302 - 10390395
LENGTH : 94
SEQUENCE : AATGTGTGTTTACGTGTGTGTGCATGTGCATGTGTGTATATGAATATATGTATACATACACACACACATACACACTCATGTAACACACACACAC
OVERHANG THRESHOLD : 40%
*******************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-466f-3p
ACCID : MI0005508
PARENT : mmu-mir-466f-2
CHROMOSOME : 2
START : 10390302
STOP : 10390395
OFFSET : 55..75
SEQUENCE : CATACACACACACATACACAC
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-466f-5p
ACCID : MI0005508
PARENT : mmu-mir-466f-2
CHROMOSOME : 2
START : 10390302
STOP : 10390395
OFFSET : 11..32
SEQUENCE : TACGTGTGTGTGCATGTGCATG
STRAND : +
******************************
*** MATURE-3P ***
______________________________________________________________________________________________
AATGTGTGTTTACGTGTGTGTGCATGTGCATGTGTGTATATGAATATATGTATACATACACACACACATACACACTCATGTAACACACACACAC REF 2 10390302 - 10390395
CATACACACACACATACACAC MATURE-3P 2 10390357 - 10390470 mmu-miR-466f-3p +
TACGTGTGTGTGCATGTGCATG MATURE-5P 2 10390313 - 10390427 mmu-miR-466f-5p +
______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......................................................ATACACACACACATACACACTCA................. 32610_0_0_0_0_0_1 MATURE-3P 1 50.00 0 0 1 50.00 23
.......................................................ATACACACACACATACACACTCATt............... 37002_0_0_0_0_0_1 MATURE-3P 1 50.00 0 0 1 50.00 24
---------- ---------- ----------
2 0 2
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 0 2 2 100.00%
---------- ---------- ----------
0 2 2
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