[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************************************
ID : mmu-mir-466f-1
DESCRIPTION : mmu-mir-466f-1 MI0005507 Mus musculus miR-466f-1 stem-loop
CHROMOSOME : 2
SPAN : 10388571 - 10388664
LENGTH : 94
SEQUENCE : CATGTGTGTTTACGTGTGTGTGCATGTGCATGTGTGTATATGAATATACATACACATACACACACACATACACACACATGCAACACACACATAT
OVERHANG THRESHOLD : 40%
*******************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-466f-3p
ACCID : MI0005507
PARENT : mmu-mir-466f-1
CHROMOSOME : 2
START : 10388571
STOP : 10388664
OFFSET : 55..75
SEQUENCE : CATACACACACACATACACAC
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-466f-5p
ACCID : MI0005507
PARENT : mmu-mir-466f-1
CHROMOSOME : 2
START : 10388571
STOP : 10388664
OFFSET : 11..32
SEQUENCE : TACGTGTGTGTGCATGTGCATG
STRAND : +
******************************
*** MATURE-3P ***
______________________________________________________________________________________________
CATGTGTGTTTACGTGTGTGTGCATGTGCATGTGTGTATATGAATATACATACACATACACACACACATACACACACATGCAACACACACATAT REF 2 10388571 - 10388664
CATACACACACACATACACAC MATURE-3P 2 10388626 - 10388739 mmu-miR-466f-3p +
TACGTGTGTGTGCATGTGCATG MATURE-5P 2 10388582 - 10388696 mmu-miR-466f-5p +
______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........................................................ACACACACACATACACACAC.................. 36443_1_0_0_0_0_4 MATURE-3P 5 35.71 1 50.00 4 33.33 20
...................................................ACACATACACACACACATACACAC.................... 11741_0_0_0_0_0_4 MATURE-3P 4 28.57 0 0.00 4 33.33 24
..........................................................CACACACACATACACACAC.................. 15292_0_0_0_0_0_2 MATURE-3P 2 14.29 0 0.00 2 16.67 19
.......................................................ATACACACACACATACACACAC.................. 39945_1_0_0_0_0_1 MATURE-3P 2 14.29 1 50.00 1 8.33 22
.........................................................ACACACACACATACACACACA................. 10194_0_0_0_0_0_1 MATURE-3P 1 7.14 0 0.00 1 8.33 21
---------- ---------- ----------
14 2 12
(14.29) (85.71)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 2 12 14 100.00%
---------- ---------- ----------
2 12 14
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