[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-466e
DESCRIPTION : mmu-mir-466e MI0005506 Mus musculus miR-466e stem-loop
CHROMOSOME : 2
SPAN : 10400715 - 10400798
LENGTH : 84
SEQUENCE : GTGTATGTGTTGATGTGTGTGTACATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE-3P
ID : mmu-miR-466e-3p
ACCID : MI0005506
PARENT : mmu-mir-466e
CHROMOSOME : 2
START : 10400715
STOP : 10400798
OFFSET : 51..73
SEQUENCE : TATACATACACGCACACATAAGA
STRAND : +
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TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-466e-5p
ACCID : MI0005506
PARENT : mmu-mir-466e
CHROMOSOME : 2
START : 10400715
STOP : 10400798
OFFSET : 12..33
SEQUENCE : GATGTGTGTGTACATGTACATA
STRAND : +
******************************
*** MATURE-3P ***
____________________________________________________________________________________
GTGTATGTGTTGATGTGTGTGTACATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC REF 2 10400715 - 10400798
TATACATACACGCACACATAAGA MATURE-3P 2 10400766 - 10400871 mmu-miR-466e-3p +
GATGTGTGTGTACATGTACATA MATURE-5P 2 10400727 - 10400831 mmu-miR-466e-5p +
____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................ATACATACACGCACACATAAGA............ 40999_2_0_0_0_0_3 MATURE-3P 5 23.81 2 15.38 3 37.50 22
..................................................TATACATACACGCACACATAAG............. 42420_3_0_0_0_0_0 MATURE-3P 3 14.29 3 23.08 0 0.00 22
...................................................ATACATACACGCACACATAAGAC........... 42082_1_0_0_0_0_1 MATURE-3P 2 9.52 1 7.69 1 12.50 23
...................................................ATACATACACGCACACATAAG............. 21421_1_0_0_0_0_1 MATURE-3P 2 9.52 1 7.69 1 12.50 21
..................................................TATACATACACGCACACATAA.............. 29584_1_0_0_0_0_0 MATURE-3P 1 4.76 1 7.69 0 0.00 21
..................................................TATACATACACGCACACgTAAG............. 8123_1_0_0_0_0_0 MATURE-3P 1 4.76 1 7.69 0 0.00 17G4
...................................................ATACATACACGCACACATAAGAt........... 35413_1_0_0_0_0_0 MATURE-3P 1 4.76 1 7.69 0 0.00 22
...................................................ATACATACACGCACAgATAAG............. 24695_1_0_0_0_0_0 MATURE-3P 1 4.76 1 7.69 0 0.00 15G5
...................................................ATACATACACGCACACAcAAGAC........... 16445_0_0_0_0_0_1 MATURE-3P 1 4.76 0 0.00 1 12.50 17C5
...................................................ATACATACACGCACACATAAGt............ 2712_0_0_0_0_0_1 MATURE-3P 1 4.76 0 0.00 1 12.50 21
.....................................................ACATACACGCACACATAAG............. 14547_0_0_0_0_0_1 MATURE-3P 1 4.76 0 0.00 1 12.50 19
....................................................TACATACACGCACACATAA.............. 7033_1_0_0_0_0_0 MATURE-3P 1 4.76 1 7.69 0 0.00 19
...................................................ATACATACACGCACACATAAGACt.......... 36225_1_0_0_0_0_0 MATURE-3P 1 4.76 1 7.69 0 0.00 23
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21 13 8
(61.90) (38.10)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE-3P 13 8 21 100.00%
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13 8 21
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