[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-466d
DESCRIPTION : mmu-mir-466d MI0005546 Mus musculus miR-466d stem-loop
CHROMOSOME : 2
SPAN : 10433594 - 10433689
LENGTH : 96
SEQUENCE : CATGTGTGTTTGTGTGTGCGTACATGTACATGTGTGTATATGAATATACATATACATACACGCACACATAGATACGCACGCACACACACACACAGG
OVERHANG THRESHOLD : 40%
*********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-466d-3p
ACCID : MI0005546
PARENT : mmu-mir-466d
CHROMOSOME : 2
START : 10433594
STOP : 10433689
OFFSET : 51..71
SEQUENCE : TATACATACACGCACACATAG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-466d-5p
ACCID : MI0005546
PARENT : mmu-mir-466d
CHROMOSOME : 2
START : 10433594
STOP : 10433689
OFFSET : 11..32
SEQUENCE : TGTGTGTGCGTACATGTACATG
STRAND : +
******************************
*** MATURE-3P ***
________________________________________________________________________________________________
CATGTGTGTTTGTGTGTGCGTACATGTACATGTGTGTATATGAATATACATATACATACACGCACACATAGATACGCACGCACACACACACACAGG REF 2 10433594 - 10433689
TATACATACACGCACACATAG MATURE-3P 2 10433645 - 10433760 mmu-miR-466d-3p +
TGTGTGTGCGTACATGTACATG MATURE-5P 2 10433605 - 10433721 mmu-miR-466d-5p +
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................................................ATATACATACACGCACACATAGAc........................ 8015_1_0_0_0_0_0 MATURE-3P 1 25.00 1 50.00 0 0.00 23
.................................................ATATACATACACGCACACATAGt......................... 4678_0_0_0_0_0_1 MATURE-3P 1 25.00 0 0.00 1 50.00 22
...................................................ATACATACACGCACACATAGt......................... 42900_0_0_0_0_0_1 MATURE-3P 1 25.00 0 0.00 1 50.00 20
..................................................TATACATACACGCACACAT............................ 34675_1_0_0_0_0_0 MATURE-3P 1 25.00 1 50.00 0 0.00 19
---------- ---------- ----------
4 2 2
(50.00) (50.00)
*** MATURE-5P ***
________________________________________________________________________________________________
CATGTGTGTTTGTGTGTGCGTACATGTACATGTGTGTATATGAATATACATATACATACACGCACACATAGATACGCACGCACACACACACACAGG REF 2 10433594 - 10433689
TATACATACACGCACACATAG MATURE-3P 2 10433645 - 10433760 mmu-miR-466d-3p +
TGTGTGTGCGTACATGTACATG MATURE-5P 2 10433605 - 10433721 mmu-miR-466d-5p +
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........GTGTGTGCGTACATGTACATGTGT.............................................................. 28405_1_0_0_0_0_0 MATURE-5P 1 100.00 1 100.00 0 0 24
---------- ---------- ----------
1 1 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 2 2 4 80.00%
MATURE-5P 1 0 1 20.00%
---------- ---------- ----------
3 2 5
[END]